Revision bb38665e
Added by Andreas Müller over 10 years ago
| cdm-eflora/src/main/java/eu/etaxonomy/cdm/io/eflora/centralAfrica/checklist/CentralAfricaChecklistReferenceImport.java | ||
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import java.sql.ResultSet; |
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import java.sql.SQLException; |
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import java.util.HashMap; |
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import java.util.HashSet; |
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import java.util.Map; |
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import java.util.Set; |
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import java.util.UUID; |
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import org.apache.commons.lang.StringUtils; |
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import org.apache.log4j.Logger; |
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import org.springframework.stereotype.Component; |
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import eu.etaxonomy.cdm.api.service.IClassificationService; |
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import eu.etaxonomy.cdm.common.CdmUtils; |
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import eu.etaxonomy.cdm.io.common.IImportConfigurator; |
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import eu.etaxonomy.cdm.io.common.IOValidator; |
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import eu.etaxonomy.cdm.io.common.ResultSetPartitioner; |
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import eu.etaxonomy.cdm.io.common.mapping.DbImportMapping; |
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import eu.etaxonomy.cdm.io.common.mapping.DbImportMarkerMapper; |
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import eu.etaxonomy.cdm.io.common.mapping.DbImportObjectCreationMapper; |
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import eu.etaxonomy.cdm.io.common.mapping.DbImportTaxIncludedInMapper; |
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import eu.etaxonomy.cdm.io.common.mapping.DbNotYetImplementedMapper; |
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import eu.etaxonomy.cdm.io.common.mapping.IMappingImport; |
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import eu.etaxonomy.cdm.io.eflora.centralAfrica.checklist.validation.CentralAfricaChecklistTaxonImportValidator; |
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import eu.etaxonomy.cdm.model.common.CdmBase; |
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import eu.etaxonomy.cdm.model.description.Distribution; |
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import eu.etaxonomy.cdm.model.description.PresenceTerm; |
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import eu.etaxonomy.cdm.model.description.TaxonDescription; |
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import eu.etaxonomy.cdm.model.location.NamedArea; |
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import eu.etaxonomy.cdm.model.location.TdwgArea; |
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import eu.etaxonomy.cdm.model.name.BotanicalName; |
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import eu.etaxonomy.cdm.model.name.Rank; |
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import eu.etaxonomy.cdm.model.reference.Reference; |
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import eu.etaxonomy.cdm.model.reference.ReferenceFactory; |
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import eu.etaxonomy.cdm.model.taxon.Taxon; |
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import eu.etaxonomy.cdm.model.taxon.TaxonBase; |
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import eu.etaxonomy.cdm.model.taxon.TaxonNode; |
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import eu.etaxonomy.cdm.model.taxon.Classification; |
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import eu.etaxonomy.cdm.strategy.parser.NonViralNameParserImpl; |
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/** |
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* @author a.mueller |
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* @created 20.02.2010 |
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* @version 1.0 |
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*/ |
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@Component |
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public class CentralAfricaChecklistReferenceImport extends CentralAfricaChecklistImportBase<Reference> implements IMappingImport<Reference, CentralAfricaChecklistImportState>{
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private static final Logger logger = Logger.getLogger(CentralAfricaChecklistReferenceImport.class); |
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private Map<UUID, Taxon> higherTaxonMap;
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private DbImportMapping<?,?> mapping;
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private DbImportMapping mapping; |
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private int modCount = 10000; |
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// private int modCount = 10000; |
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private static final String pluralString = "references"; |
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private static final String dbTableName = "checklist"; |
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private static final Class cdmTargetClass = TaxonBase.class; |
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private static final Class<?> cdmTargetClass = TaxonBase.class;
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private static final String strOrderBy = " ORDER BY source "; |
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public CentralAfricaChecklistReferenceImport(){
|
| ... | ... | |
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return strQuery; |
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} |
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/* (non-Javadoc) |
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* @see eu.etaxonomy.cdm.io.erms.ErmsImportBase#getMapping() |
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*/ |
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protected DbImportMapping getMapping() {
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@Override |
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protected DbImportMapping<?,?> getMapping() {
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if (mapping == null){
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mapping = new DbImportMapping(); |
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mapping.addMapper(DbImportObjectCreationMapper.NewInstance(this, "source", REFERENCE_NAMESPACE)); |
| ... | ... | |
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return mapping; |
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} |
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/* (non-Javadoc) |
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* @see eu.etaxonomy.cdm.io.berlinModel.in.BerlinModelImportBase#getRecordQuery(eu.etaxonomy.cdm.io.berlinModel.in.BerlinModelImportConfigurator) |
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*/ |
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@Override |
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protected String getRecordQuery(CentralAfricaChecklistImportConfigurator config) {
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String strSelect = " SELECT DISTINCT source "; |
| ... | ... | |
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return result; |
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} |
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/* (non-Javadoc) |
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* @see eu.etaxonomy.cdm.io.common.mapping.IMappingImport#createObject(java.sql.ResultSet) |
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*/ |
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public Reference createObject(ResultSet rs, CentralAfricaChecklistImportState state) throws SQLException {
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Reference ref = ReferenceFactory.newGeneric(); |
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@Override |
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public Reference<?> createObject(ResultSet rs, CentralAfricaChecklistImportState state) throws SQLException {
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Reference<?> ref = ReferenceFactory.newGeneric(); |
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String sourceString = rs.getString("source");
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ref.setTitle(sourceString); |
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return ref; |
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} |
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/* (non-Javadoc) |
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* @see eu.etaxonomy.cdm.io.common.CdmIoBase#doCheck(eu.etaxonomy.cdm.io.common.IImportConfigurator) |
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*/ |
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@Override |
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protected boolean doCheck(CentralAfricaChecklistImportState state){
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IOValidator<CentralAfricaChecklistImportState> validator = new CentralAfricaChecklistTaxonImportValidator(); |
Also available in: Unified diff
reintegrate cdmlib-app-3.3 branch into trunk