Revision ac9742df
Added by Patrick Plitzner over 6 years ago
| app-import/src/main/java/eu/etaxonomy/cdm/io/redlist/gefaesspflanzen/RedListGefaesspflanzenImportNames.java | ||
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import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase; |
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import eu.etaxonomy.cdm.model.common.CdmBase; |
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import eu.etaxonomy.cdm.model.name.BotanicalName; |
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatus; |
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType; |
|
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import eu.etaxonomy.cdm.model.name.Rank; |
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import eu.etaxonomy.cdm.model.name.TaxonNameBase; |
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import eu.etaxonomy.cdm.model.taxon.Synonym; |
| ... | ... | |
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String authorKombString = rs.getString(RedListUtil.AUTOR_KOMB); |
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String authorBasiString = rs.getString(RedListUtil.AUTOR_BASI); |
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|
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//---NAME--- |
|
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if(CdmUtils.isBlank(taxNameString) && CdmUtils.isBlank(ep1String)){
|
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RedListUtil.logMessage(id, "No name found!", logger); |
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} |
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Rank rank = makeRank(state, rangString); |
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Rank rank = makeRank(id, state, rangString);
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|
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if(rank==null){
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RedListUtil.logMessage(id, "Rank could not be resolved.", logger); |
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} |
| ... | ... | |
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name.setInfraSpecificEpithet(ep3String); |
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} |
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} |
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//nomenclatural status |
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NomenclaturalStatusType status = makeNomenclaturalStatus(id, state, nomZusatzString); |
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if(status!=null){
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name.addStatus(NomenclaturalStatus.NewInstance(status)); |
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} |
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|
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|
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//--- AUTHORS --- |
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//combination author |
| ... | ... | |
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state.getTaxonMap().put(id, taxonBase.getUuid()); |
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} |
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private Rank makeRank(RedListGefaesspflanzenImportState state, String rankStr) {
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private Rank makeRank(long id, RedListGefaesspflanzenImportState state, String rankStr) {
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|
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Rank rank = null; |
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try {
|
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rank = state.getTransformer().getRankByKey(rankStr); |
| ... | ... | |
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e.printStackTrace(); |
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} |
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if(rank==null){
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logger.error(rankStr+" could not be associated to a known rank.");
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RedListUtil.logMessage(id, rankStr+" could not be associated to a known rank.", logger);
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|
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} |
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return rank; |
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} |
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|
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private NomenclaturalStatusType makeNomenclaturalStatus(long id, RedListGefaesspflanzenImportState state, String nomZusatzString) {
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NomenclaturalStatusType status = null; |
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try {
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status = state.getTransformer().getNomenclaturalStatusByKey(nomZusatzString); |
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} catch (UndefinedTransformerMethodException e) {
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e.printStackTrace(); |
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} |
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if(status==null){
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RedListUtil.logMessage(id, nomZusatzString+" could not be associated to a known nomenclatural status.", logger); |
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} |
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return status; |
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} |
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|
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|
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|
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@Override |
| app-import/src/main/java/eu/etaxonomy/cdm/io/redlist/gefaesspflanzen/RedListGefaesspflanzenTransformer.java | ||
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|
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import eu.etaxonomy.cdm.io.common.mapping.InputTransformerBase; |
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import eu.etaxonomy.cdm.io.common.mapping.UndefinedTransformerMethodException; |
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType; |
|
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import eu.etaxonomy.cdm.model.name.Rank; |
| 18 | 19 |
|
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/** |
| ... | ... | |
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return null; |
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} |
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|
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@Override |
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public NomenclaturalStatusType getNomenclaturalStatusByKey(String key) throws UndefinedTransformerMethodException {
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if (key == null){return null;}
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if (key.equals("nom. cons.")){return NomenclaturalStatusType.CONSERVED();}
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else if (key.equals("nom. illeg.")){return NomenclaturalStatusType.ILLEGITIMATE();}
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else if (key.equals("nom. inval.")){return NomenclaturalStatusType.INVALID();}
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else if (key.equals("nom. ambig.")){return NomenclaturalStatusType.AMBIGUOUS();}
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else if (key.equals("nom. nud.")){return NomenclaturalStatusType.NUDUM();}
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else if (key.equals("nom. rejic.")){return NomenclaturalStatusType.REJECTED();}
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else if (key.equals("nom. utique rejic.")){return NomenclaturalStatusType.UTIQUE_REJECTED();}
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else if (key.equals("nom. utique rejic. pro.")){return NomenclaturalStatusType.UTIQUE_REJECTED_PROP();}
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else if (key.equals("comb. nov.")){return NomenclaturalStatusType.COMB_NOV();}
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return null; |
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} |
|
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|
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} |
Also available in: Unified diff
Import nomenclatural status