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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.io.cuba;
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import java.util.UUID;
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import org.apache.commons.lang.StringUtils;
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import org.apache.log4j.Logger;
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import eu.etaxonomy.cdm.io.common.mapping.InputTransformerBase;
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import eu.etaxonomy.cdm.io.common.mapping.UndefinedTransformerMethodException;
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm;
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/**
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* @author a.mueller
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* @since 01.03.2010
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*/
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public final class CubaTransformer extends InputTransformerBase {
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private static final long serialVersionUID = 1070018208741186271L;
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@SuppressWarnings("unused")
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private static final Logger logger = Logger.getLogger(CubaTransformer.class);
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//references
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public static final UUID uuidRefFRC = UUID.fromString("c1caf6a2-5083-4f44-8f97-9abe23a84cd8");
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public static final UUID uuidRefAS = UUID.fromString("1f15291a-b4c5-4e15-960f-d0145a250539");
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public static final UUID uuidRefFC = UUID.fromString("c5a0bfb8-85b2-422d-babe-423aa2e24c35");
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public static final UUID uuidRefSanchez = UUID.fromString("251a51e2-8371-42e2-b042-063ecaaef241");
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//refPteridophyta
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protected static final UUID uuidRefPteridophyta78 = UUID.fromString("e9f68d98-c706-4bb6-8cbf-2be1f3897469");
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protected static final UUID uuidRefPteridophyta2 = UUID.fromString("910ae303-bd67-4dce-bb12-aebf889ca3fd");
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protected static final UUID uuidRefPteridophyta3 = UUID.fromString("80f83b9a-2aa4-4dfb-bbcd-457d3ed9e836");
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protected static final UUID uuidRefPteridophyta5 = UUID.fromString("bf41be7c-5832-4659-be47-66b94bf393f4");
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protected static final UUID uuidRefPteridophyta8_82 = UUID.fromString("21ca49a2-4243-4041-b876-13dfbcc7abb8");
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protected static final UUID uuidRefPteridophyta7 = uuidRefSanchez;
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//featureUUID
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public static final UUID uuidAlternativeFamily = UUID.fromString("a005f8a1-6377-4641-a826-185f67136860");
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public static final UUID uuidAlternativeFamily2 = UUID.fromString("ff15b54a-6785-4ba0-acb6-8fb2eab80a6a");
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//presenceTerm
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protected static final UUID nonNativeDoubtfullyNaturalisedUuid = UUID.fromString("a1e26234-831e-4190-9fe3-011aca09ddba");
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// private static final UUID adventiveAlienUuid = UUID.fromString("06e48a0b-3e48-4ef8-9bdd-0755880e99ce");
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// private static final UUID cultivatedOnlyUuid = UUID.fromString("9cca5c3b-aced-41c4-accc-f800b67168f8");
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protected static final UUID occasionallyCultivatedUuid = UUID.fromString("936c3f9a-6099-4322-9792-0a72c6c2ce25");
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// private static final UUID doubtfulIndigenousUuid = UUID.fromString("f47f4f4e-9d84-459a-b747-27a1af24ab7a");
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protected static final UUID doubtfulIndigenousDoubtfulUuid = UUID.fromString("7ddfd94d-01a4-496c-a6d6-18584c00af59");
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protected static final UUID rareCasualUuid = UUID.fromString("8914ce0d-7d31-4c88-8317-985f2b3a493b");
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protected static final UUID endemicDoubtfullyPresentUuid = UUID.fromString("5f954f08-267a-4928-b073-12328f74c187");
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protected static final UUID naturalisedDoubtfullyPresentUuid = UUID.fromString("9e0b413b-5a68-4e5b-91f2-227b4f832466");
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protected static final UUID nonNativeDoubtfullyPresentUuid = UUID.fromString("c42ca644-1773-4230-a2ee-328a5d4a21ab");
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private static final UUID endemicInErrorUuid = UUID.fromString("679b215d-c231-4ee2-ae12-3ffc3dd528ad");
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private static final UUID adventiveInErrorUuid = UUID.fromString("9b910b7b-43e3-4260-961c-6063b11cb7dc");
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private static final UUID nonNativeInErrorUuid = UUID.fromString("b9153d90-9e31-465a-a28c-79077a8ed4c2");
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private static final UUID naturalisedInErrorUuid = UUID.fromString("8d918a37-3add-4e1c-a233-c37dbee209aa");
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//Named Areas
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public static final UUID uuidCubaVocabulary = UUID.fromString("2119f610-1f93-4d87-af28-40aeefaca100");
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// public static final UUID uuidCyprusDivisionsAreaLevel = UUID.fromString("ff52bbd9-f73d-4476-af39-f3991fa892bd");
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public static final UUID uuidCuba = UUID.fromString("d0144a6e-0e17-4a1d-bce5-d464a2aa7229");
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public static final UUID uuidWesternCuba = UUID.fromString("53ee35a5-03dd-4c1e-9b23-1a0d08489684");
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public static final UUID uuidPinarDelRio = UUID.fromString("ee1bae89-b6a8-4b89-a864-238fe3c4dbf3");
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public static final UUID uuidHabana = UUID.fromString("ff906b63-6e74-4a38-b492-73d32817ad3a");
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public static final UUID uuidCiudadHabana = UUID.fromString("af96dc90-ef03-4e2c-9c65-50dd1cca4f4f");
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public static final UUID uuidMayabeque = UUID.fromString("7813fc47-1038-49d0-9fc7-07d245abcf2d");
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public static final UUID uuidArtemisa = UUID.fromString("7e236945-1097-43f7-9deb-dedf3f45dfe1");
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public static final UUID uuidMatanzas = UUID.fromString("bc280278-1b67-4766-ba28-e3a5c215d6a9");
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public static final UUID uuidIslaDeLaJuventud = UUID.fromString("0e0683d6-90d4-4b0f-834e-05737ca9b2b4");
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public static final UUID uuidCentralCuba = UUID.fromString("25eb5879-358e-4ff7-837d-101569d5d843");
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public static final UUID uuidVillaClara = UUID.fromString("4de5e35d-fdad-49d0-a5c8-dc44e4e844a0");
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public static final UUID uuidCienfuegos = UUID.fromString("c4189205-4543-4f4d-b211-6f899734a2f1");
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public static final UUID uuidSanctiSpiritus = UUID.fromString("70ee99b9-d006-4a08-a8c2-19269d60865f");
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public static final UUID uuidCiegoDeAvila = UUID.fromString("2ce7f4bc-4142-4866-b156-cf5300973c6d");
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public static final UUID uuidCamaguey = UUID.fromString("4a4e2ab9-bce1-4018-8654-e7dfe6ea9a0f");
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public static final UUID uuidLasTunas = UUID.fromString("6e0e9c28-23fe-4ea7-8ae1-75e1dce385e9");
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public static final UUID uuidEastCuba = UUID.fromString("6a9ed0e2-7d3a-4620-9376-720c166674ee");
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public static final UUID uuidGranma = UUID.fromString("7098418f-992a-4888-b4a0-722870bc7c69");
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public static final UUID uuidHolguin = UUID.fromString("1595e1f2-5ae6-4db7-982c-552c26130051");
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public static final UUID uuidSantiagoDeCuba = UUID.fromString("838a2e44-f3cc-4d89-83a8-6f83c6f9726d");
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public static final UUID uuidGuantanamo = UUID.fromString("3a76b1af-da3a-44a3-859f-eeba5ad6f58b");
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public static final UUID uuidEspanola = UUID.fromString("27d9d0f3-cd5f-4f3e-979d-64e47b6b5768");
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public static final UUID uuidJamaica = UUID.fromString("2825a0ee-0bd1-49d5-afb4-bac80db5551f");
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public static final UUID uuidPuertoRico = UUID.fromString("9fca701d-4899-4266-a29f-0d136670c795");
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public static final UUID uuidSmallerAntilles = UUID.fromString("9720309a-2467-4aad-992e-b3c34b95d8d7");
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public static final UUID uuidBahamas = UUID.fromString("23615e27-e916-48f4-8d49-8c148106216c");
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public static final UUID uuidCaymanIslands = UUID.fromString("f53ea0b5-3bca-4e95-9a10-2d13edcd7501");
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public static final UUID uuidNorthAmerica = UUID.fromString("5ab08324-baa2-4121-8c37-e1d558b51f2f");
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public static final UUID uuidCentralAmerica = UUID.fromString("4d972402-5ef8-43d8-a377-f0b6dd88d32e");
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public static final UUID uuidSouthAmerica = UUID.fromString("0fccc041-ce9d-40d5-8b9b-d7d833feed38");
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public static final UUID uuidOldWorld = UUID.fromString("c6b45544-01df-4c97-bb29-9058964c5b57");
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@Override
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public UUID getNamedAreaUuid(String key) throws UndefinedTransformerMethodException {
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if (StringUtils.isBlank(key)){return null;
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}else if (key.equalsIgnoreCase("Cu")){return uuidCuba;
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}else if (key.equalsIgnoreCase("CuW")){return uuidWesternCuba;
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}else if (key.equalsIgnoreCase("PR*")){return uuidPinarDelRio;
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}else if (key.equalsIgnoreCase("PR PR*")){return uuidPinarDelRio;
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// }else if (key.equals("HAB")){return uuidHabana;
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}else if (key.equalsIgnoreCase("Hab*")){return uuidCiudadHabana;
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}else if (key.equalsIgnoreCase("Hab(*)")){return uuidCiudadHabana;
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}else if (key.equalsIgnoreCase("May")){return uuidMayabeque;
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}else if (key.equalsIgnoreCase("Art")){return uuidArtemisa;
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}else if (key.equalsIgnoreCase("Mat")){return uuidMatanzas;
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}else if (key.equalsIgnoreCase("IJ")){return uuidIslaDeLaJuventud;
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}else if (key.equalsIgnoreCase("CuC")){return uuidCentralCuba;
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}else if (key.equalsIgnoreCase("VC")){return uuidVillaClara;
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}else if (key.equalsIgnoreCase("Ci")){return uuidCienfuegos;
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}else if (key.equalsIgnoreCase("SS")){return uuidSanctiSpiritus;
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}else if (key.equalsIgnoreCase("CA")){return uuidCiegoDeAvila;
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}else if (key.equalsIgnoreCase("Cam")){return uuidCamaguey;
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}else if (key.equalsIgnoreCase("LT")){return uuidLasTunas;
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}else if (key.equalsIgnoreCase("CuE")){return uuidEastCuba;
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}else if (key.equalsIgnoreCase("Gr")){return uuidGranma;
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}else if (key.equalsIgnoreCase("Ho")){return uuidHolguin;
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}else if (key.equalsIgnoreCase("SC")){return uuidSantiagoDeCuba;
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}else if (key.equalsIgnoreCase("Gu")){return uuidGuantanamo;
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}else if (key.equalsIgnoreCase("Esp")){return uuidEspanola;
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}else if (key.equalsIgnoreCase("Ja")){return uuidJamaica;
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}else if (key.equalsIgnoreCase("PR")){return uuidPuertoRico;
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}else if (key.equalsIgnoreCase("Men")){return uuidSmallerAntilles;
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}else if (key.equalsIgnoreCase("Bah")){return uuidBahamas;
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}else if (key.equalsIgnoreCase("Cay")){return uuidCaymanIslands;
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}else if (key.equalsIgnoreCase("AmN")){return uuidNorthAmerica;
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}else if (key.equalsIgnoreCase("AmC")){return uuidCentralAmerica;
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}else if (key.equalsIgnoreCase("AmS")){return uuidSouthAmerica;
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}else if (key.equalsIgnoreCase("VM")){return uuidOldWorld;
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}else{
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return null;
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}
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}
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@Override
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public UUID getPresenceTermUuid(String key) throws UndefinedTransformerMethodException {
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if (StringUtils.isBlank(key)){return null;
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// }else if (key.equalsIgnoreCase("Ind.")){return CyprusTransformer.indigenousUuid;
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// }else if (key.equalsIgnoreCase("+")){return CyprusTransformer.indigenousUuid;
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// }else if (key.equalsIgnoreCase("?Ind.")){return CyprusTransformer.indigenousDoubtfulUuid;
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// }else if (key.equalsIgnoreCase("?")){return CyprusTransformer.indigenousDoubtfulUuid;
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// }else if (key.equalsIgnoreCase("?Cult.")){return CyprusTransformer.cultivatedDoubtfulUuid;
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// }else if (key.equalsIgnoreCase("Ind.?")){return doubtfulIndigenousUuid;
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// }else if (key.equalsIgnoreCase("D")){return doubtfulIndigenousUuid;
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}else if (key.equalsIgnoreCase("?Ind.?")){return doubtfulIndigenousDoubtfulUuid;
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}else if (key.equalsIgnoreCase("??")){return doubtfulIndigenousDoubtfulUuid;
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}else if (key.equalsIgnoreCase("Dud.")){return nonNativeDoubtfullyNaturalisedUuid;
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}else if (key.equalsIgnoreCase("P")){return nonNativeDoubtfullyNaturalisedUuid;
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// }else if (key.equalsIgnoreCase("Adv.")){return adventiveAlienUuid;
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// }else if (key.equalsIgnoreCase("A")){return adventiveAlienUuid;
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}else if (key.equalsIgnoreCase("(A)")){return rareCasualUuid;
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}else if (key.equalsIgnoreCase("(C)")){return occasionallyCultivatedUuid;
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}else if (key.equalsIgnoreCase("?E")){return endemicDoubtfullyPresentUuid;
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}else if (key.equalsIgnoreCase("?Nat.")){return naturalisedDoubtfullyPresentUuid;
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}else if (key.equalsIgnoreCase("?N")){return naturalisedDoubtfullyPresentUuid;
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}else if (key.equalsIgnoreCase("?Dud.")){return nonNativeDoubtfullyPresentUuid;
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}else if (key.equalsIgnoreCase("?P")){return nonNativeDoubtfullyPresentUuid;
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}else if (key.equalsIgnoreCase("-End.")){return endemicInErrorUuid;
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}else if (key.equalsIgnoreCase("-E")){return endemicInErrorUuid;
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}else if (key.equalsIgnoreCase("-Nat.")){return naturalisedInErrorUuid;
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}else if (key.equalsIgnoreCase("-N")){return naturalisedInErrorUuid;
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}else if (key.equalsIgnoreCase("-Dud.")){return nonNativeInErrorUuid;
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}else if (key.equalsIgnoreCase("-P")){return nonNativeInErrorUuid;
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}else if (key.equalsIgnoreCase("-Adv.")){return adventiveInErrorUuid;
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}else if (key.equalsIgnoreCase("-A")){return adventiveInErrorUuid;
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}else{
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return null;
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}
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}
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@Override
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public PresenceAbsenceTerm getPresenceTermByKey(String key) throws UndefinedTransformerMethodException {
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if (StringUtils.isBlank(key)){return null;
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}else if (key.equalsIgnoreCase("E")){return PresenceAbsenceTerm.ENDEMIC_FOR_THE_RELEVANT_AREA();
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}else if (key.equalsIgnoreCase("+")){return PresenceAbsenceTerm.NATIVE();
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}else if (key.equalsIgnoreCase("Ind.")){return PresenceAbsenceTerm.NATIVE();
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}else if (key.equalsIgnoreCase("Ind.?")){return PresenceAbsenceTerm.NATIVE_DOUBTFULLY_NATIVE();
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}else if (key.equalsIgnoreCase("D")){return PresenceAbsenceTerm.NATIVE_DOUBTFULLY_NATIVE();
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}else if (key.equalsIgnoreCase("-Ind.")){return PresenceAbsenceTerm.NATIVE_REPORTED_IN_ERROR();
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}else if (key.equalsIgnoreCase("?Ind.")){return PresenceAbsenceTerm.NATIVE_PRESENCE_QUESTIONABLE();
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}else if (key.equalsIgnoreCase("?")){return PresenceAbsenceTerm.NATIVE_PRESENCE_QUESTIONABLE();
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}else if (key.equalsIgnoreCase("Adv.")){return PresenceAbsenceTerm.CASUAL();
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}else if (key.equalsIgnoreCase("A")){return PresenceAbsenceTerm.CASUAL();
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}else if (key.equalsIgnoreCase("Nat.")){return PresenceAbsenceTerm.NATURALISED();
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}else if (key.equalsIgnoreCase("N")){return PresenceAbsenceTerm.NATURALISED();
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}else if (key.equalsIgnoreCase("Cult.")){return PresenceAbsenceTerm.CULTIVATED();
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}else if (key.equalsIgnoreCase("C")){return PresenceAbsenceTerm.CULTIVATED();
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}else if (key.equalsIgnoreCase("?Cult.")){return PresenceAbsenceTerm.CULTIVATED_PRESENCE_QUESTIONABLE();
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}else if (key.equalsIgnoreCase("-Cult.")){return PresenceAbsenceTerm.CULTIVATED_REPORTED_IN_ERROR();
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// }else if (key.equalsIgnoreCase("-C")){return PresenceAbsenceTerm.CULTIVATED_REPORTED_IN_ERROR();
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}else if (key.equalsIgnoreCase("--")){return PresenceAbsenceTerm.REPORTED_IN_ERROR();
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// }else if (key.equalsIgnoreCase("--")){return PresenceAbsenceTerm;
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}else{
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return null;
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}
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}
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@Override
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public UUID getFeatureUuid(String key) throws UndefinedTransformerMethodException {
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if (key == null){
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244
|
return null;
|
|
245
|
}else if (key.equalsIgnoreCase("Alt.Fam.")){
|
|
246
|
return uuidAlternativeFamily;
|
|
247
|
}else if (key.equalsIgnoreCase("Alt.Fam.2")){
|
|
248
|
return uuidAlternativeFamily2;
|
|
249
|
}else{
|
|
250
|
throw new RuntimeException("feature not defined: " + key);
|
|
251
|
}
|
|
252
|
}
|
|
253
|
|
|
254
|
|
|
255
|
|
|
256
|
}
|