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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.app.wp6.palmae;
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import java.io.File;
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import java.net.MalformedURLException;
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import java.net.URISyntaxException;
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import java.net.URL;
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import org.apache.log4j.Logger;
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import org.springframework.transaction.TransactionStatus;
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import eu.etaxonomy.cdm.app.common.CdmDestinations;
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import eu.etaxonomy.cdm.database.DbSchemaValidation;
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import eu.etaxonomy.cdm.database.ICdmDataSource;
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import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
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import eu.etaxonomy.cdm.io.common.IImportConfigurator;
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import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
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import eu.etaxonomy.cdm.io.common.ImportResult;
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import eu.etaxonomy.cdm.io.taxonx.TaxonXImportConfigurator;
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/**
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* @author a.mueller
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* @since 20.06.2008
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* @version 1.0
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*/
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public class PalmaeTaxonXImportActivator {
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private static final Logger logger = Logger.getLogger(PalmaeTaxonXImportActivator.class);
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//database validation status (create, update, validate ...)
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static DbSchemaValidation hbm2dll = DbSchemaValidation.UPDATE;
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//static final String tcsSource = TcsSources.taxonX_local();
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//static File source = TcsSources.taxonX_localDir();
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static File source = new File("target/classes/taxonX");
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static ICdmDataSource cdmDestination = CdmDestinations.localH2Palmae();
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//check - import
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static CHECK check = CHECK.IMPORT_WITHOUT_CHECK;
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static boolean doDescriptions = true;
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static boolean doNomenclature = true;
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static boolean doMods = true;
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public ImportResult runImport(){
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ImportResult success = new ImportResult();
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//make destination
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ICdmDataSource destination = cdmDestination;
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TaxonXImportConfigurator taxonXImportConfigurator = TaxonXImportConfigurator.NewInstance(null, destination);
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// invoke import
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CdmDefaultImport<IImportConfigurator> cdmImport = new CdmDefaultImport<IImportConfigurator>();
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taxonXImportConfigurator.setDoFacts(doDescriptions);
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taxonXImportConfigurator.setDoTypes(doNomenclature);
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taxonXImportConfigurator.setDoMods(doMods);
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taxonXImportConfigurator.setCheck(check);
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taxonXImportConfigurator.setDbSchemaValidation(hbm2dll);
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cdmImport.startController(taxonXImportConfigurator, destination);
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//new Test().invoke(tcsImportConfigurator);
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if (source.isDirectory()){
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makeDirectory(cdmImport, taxonXImportConfigurator, source);
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}else{
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try {
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success = importFile(cdmImport, taxonXImportConfigurator, source);
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} catch (URISyntaxException e) {
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success.addException(e);
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e.printStackTrace();
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}
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}
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return success;
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}
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private ImportResult makeDirectory(CdmDefaultImport<IImportConfigurator> cdmImport, TaxonXImportConfigurator taxonXImportConfigurator, File source){
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ImportResult success = new ImportResult();
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int count = 0;
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for (File file : source.listFiles() ){
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if (file.isFile()){
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doCount(count++, 300, "Files");
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try {
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success = importFile(cdmImport, taxonXImportConfigurator, file);
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} catch (URISyntaxException e) {
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success = new ImportResult();
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success.addException(e);
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e.printStackTrace();
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}
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}else{
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if (! file.getName().startsWith(".")){
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makeDirectory(cdmImport, taxonXImportConfigurator, file);
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}
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}
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}
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return success;
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}
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private ImportResult importFile(CdmDefaultImport<IImportConfigurator> cdmImport,
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TaxonXImportConfigurator config, File file) throws URISyntaxException{
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ImportResult success ;
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try{
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URL url = file.toURI().toURL();
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config.setSource(url.toURI());
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String originalSourceId = file.getName();
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originalSourceId =originalSourceId.replace(".xml", "");
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logger.debug(originalSourceId);
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config.setOriginalSourceId(originalSourceId);
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TransactionStatus tx = cdmImport.getCdmAppController().startTransaction();
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success = cdmImport.invoke(config);
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cdmImport.getCdmAppController().commitTransaction(tx);
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return success;
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} catch (MalformedURLException e) {
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logger.warn(e);
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success = new ImportResult();
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success.addException(e);
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return success;
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}
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}
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protected void doCount(int count, int modCount, String pluralString){
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if ((count % modCount ) == 0 && count!= 0 ){ logger.info(pluralString + " handled: " + (count));}
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}
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/**
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* @param args
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*/
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public static void main(String[] args) {
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System.out.println("Start import from Source("+ source.toString() + ") ...");
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PalmaeTaxonXImportActivator importer = new PalmaeTaxonXImportActivator();
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importer.runImport();
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System.out.println("End import from Source ("+ source.toString() + ")...");
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}
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}
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