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Revision 9cc443ab

ID9cc443ab282b641d08999f4f4346e04012a8eb41
Parent 1968849d
Child c167aac2

Added by Andreas Kohlbecker about 5 years ago

ref #6026 support for making statistics on parsed type data:
Type parsing statistics:
- Type: field 'Type' can not be parsed (parse problem of whole typeString)
- Type: fielUnitStr can not be parsed (parse problem of fielUnitStr)
- Type: Could not parse specimen (parse problems in holotype, isotype)

View differences:

app-import/src/main/java/eu/etaxonomy/cdm/io/iapt/IAPTExcelImport.java
295 295
            FieldUnit fieldUnit = parseFieldUnit(fieldUnitStr, regNumber, state);
296 296
            if(fieldUnit == null) {
297 297
                // create a field unit with only a titleCache using the fieldUnitStr substring
298
                logger.warn(csvReportLine(regNumber, "Type: fielUnitStr can not be parsed", fieldUnitStr));
298 299
                fieldUnit = FieldUnit.NewInstance();
299 300
                fieldUnit.setTitleCache(fieldUnitStr, true);
300 301
                getOccurrenceService().save(fieldUnit);
......
310 311
            FieldUnit fieldUnit = FieldUnit.NewInstance();
311 312
            fieldUnit.setTitleCache(typeStr, true);
312 313
            getOccurrenceService().save(fieldUnit);
313
            logger.warn(csvReportLine(regNumber, "Type field can not be parsed", typeStr));
314
            logger.warn(csvReportLine(regNumber, "Type: field 'Type' can not be parsed", typeStr));
314 315
        }
315 316
        getNameService().save(taxonName);
316 317
    }
......
614 615
                    }
615 616

  
616 617
                    if(collectionCode == null && instituteStr == null){
617
                        logger.warn(csvReportLine(regNumber, "neither 'collectionCode' nor 'institute' found in ", text));
618
                        logger.warn(csvReportLine(regNumber, "Type: neither 'collectionCode' nor 'institute' found in ", text));
618 619
                        continue;
619 620
                    }
620 621
                    collection = getCollection(collectionCode, instituteStr, subCollectionStr);
......
624 625
            }
625 626
        }
626 627
        if(specimen == null) {
627
            logger.warn(csvReportLine(regNumber, "Could not parse specimen fieldUnit", typeName.name().toString(), text));
628
            logger.warn(csvReportLine(regNumber, "Type: Could not parse specimen", typeName.name().toString(), text));
628 629
        }
629 630
        if(unusualAccessionNumber){
630
            logger.warn(csvReportLine(regNumber, "Unusual accession number", typeName.name().toString(), text, accessionNumber));
631
            logger.warn(csvReportLine(regNumber, "Type: Unusual accession number", typeName.name().toString(), text, accessionNumber));
631 632
        }
632 633
        return specimen;
633 634
    }

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