Revision 925afb79
Added by Andreas Müller over 4 years ago
| cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/indexFungorum/IndexFungorumGeneraImport.java | ||
|---|---|---|
| 78 | 78 |
try {
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| 79 | 79 |
while (rs.next()){
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| 80 | 80 |
|
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//TODO |
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//DisplayName, NomRefCache |
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| 81 |
//Don't use (created bei Marc): DisplayName, NomRefCache |
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| 83 | 82 |
|
| 84 | 83 |
Double id = (Double)rs.getObject("RECORD NUMBER");
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| 85 | 84 |
|
| ... | ... | |
| 114 | 113 |
success = false; |
| 115 | 114 |
} |
| 116 | 115 |
return success; |
| 117 |
|
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| 118 | 116 |
} |
| 119 | 117 |
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| 120 | 118 |
private Taxon getParentTaxon(IndexFungorumImportState state, ResultSet rs) throws SQLException {
|
| ... | ... | |
| 159 | 157 |
@Override |
| 160 | 158 |
public Map<Object, Map<String, ? extends CdmBase>> getRelatedObjectsForPartition(ResultSet rs, IndexFungorumImportState state) {
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| 161 | 159 |
String nameSpace; |
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Class<?> cdmClass; |
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Set<String> idSet; |
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Map<Object, Map<String, ? extends CdmBase>> result = new HashMap<Object, Map<String, ? extends CdmBase>>();
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// Class<?> cdmClass;
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// Set<String> idSet;
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Map<Object, Map<String, ? extends CdmBase>> result = new HashMap<>(); |
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| 165 | 163 |
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| 166 | 164 |
try{
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Set<String> taxonNameSet = new HashSet<String>();
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// Set<String> taxonNameSet = new HashSet<>();
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| 168 | 166 |
while (rs.next()){
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| 169 | 167 |
// handleForeignKey(rs, taxonIdSet,"tu_acctaxon" ); |
| 170 | 168 |
} |
| 171 | 169 |
|
| 172 | 170 |
//taxon map |
| 173 | 171 |
nameSpace = NAMESPACE_SUPRAGENERIC_NAMES ; |
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cdmClass = TaxonBase.class;
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// cdmClass = Taxon.class;
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| 175 | 173 |
// idSet = taxonNameSet; |
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Map<String, TaxonBase<?>> taxonMap = new HashMap<String, TaxonBase<?>>(); |
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List<TaxonBase> list = getTaxonService().listTaxaByName(Taxon.class, "*", null, null, null, "*", null, 1000000, null); |
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Map<String, TaxonBase<?>> taxonMap = new HashMap<>(); |
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@SuppressWarnings("rawtypes")
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List<TaxonBase> list = getTaxonService().listTaxaByName(Taxon.class, "*", null, null, null, "*", null, 1000000, null); |
|
| 178 | 177 |
for (TaxonBase<?> taxon : list){
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| 179 | 178 |
taxonMap.put(CdmBase.deproxy(taxon.getName()).getGenusOrUninomial(), taxon); |
| 180 | 179 |
} |
| ... | ... | |
| 182 | 181 |
|
| 183 | 182 |
//sourceReference |
| 184 | 183 |
Reference sourceReference = getReferenceService().find(PesiTransformer.uuidSourceRefIndexFungorum); |
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Map<String, Reference> referenceMap = new HashMap<String, Reference>();
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Map<String, Reference> referenceMap = new HashMap<>(); |
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| 186 | 185 |
referenceMap.put(SOURCE_REFERENCE, sourceReference); |
| 187 | 186 |
result.put(NAMESPACE_REFERENCE, referenceMap); |
| 188 | 187 |
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