Revision 8422c0cd
Added by Andreas Müller almost 8 years ago
| app-import/src/main/java/eu/etaxonomy/cdm/io/berlinModel/in/BerlinModelReferenceImport.java | ||
|---|---|---|
| 259 | 259 |
|
| 260 | 260 |
//for the concept reference a fixed uuid may be needed -> change uuid |
| 261 | 261 |
Integer sourceSecId = (Integer)config.getSourceSecId(); |
| 262 |
Reference<?> sec = refToSave.get(sourceSecId);
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|
| 262 |
Reference sec = refToSave.get(sourceSecId); |
|
| 263 | 263 |
|
| 264 | 264 |
if (sec != null){
|
| 265 | 265 |
sec.setUuid(config.getSecUuid()); |
| ... | ... | |
| 309 | 309 |
|
| 310 | 310 |
if (inRefFk != null){
|
| 311 | 311 |
|
| 312 |
Reference<?> thisRef = relatedReferencesMap.get(String.valueOf(refId));
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|
| 312 |
Reference thisRef = relatedReferencesMap.get(String.valueOf(refId)); |
|
| 313 | 313 |
|
| 314 |
Reference<?> inRef = relatedReferencesMap.get(String.valueOf(inRefFk));
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|
| 314 |
Reference inRef = relatedReferencesMap.get(String.valueOf(inRefFk)); |
|
| 315 | 315 |
|
| 316 | 316 |
if (thisRef != null){
|
| 317 | 317 |
if (inRef == null){
|
| ... | ... | |
| 410 | 410 |
Boolean thesisFlag = (Boolean)valueMap.get("thesisFlag".toLowerCase());
|
| 411 | 411 |
|
| 412 | 412 |
|
| 413 |
Reference<?> referenceBase;
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| 413 |
Reference referenceBase; |
|
| 414 | 414 |
logger.debug("RefCategoryFk: " + categoryFk);
|
| 415 | 415 |
|
| 416 | 416 |
if (thesisFlag){
|
| ... | ... | |
| 489 | 489 |
BerlinModelImportState state, |
| 490 | 490 |
ResultSetPartitioner partitioner, |
| 491 | 491 |
int refId, |
| 492 |
Reference<?> ref,
|
|
| 492 |
Reference ref, |
|
| 493 | 493 |
RefCounter refCounter, |
| 494 | 494 |
Map<Integer, Reference> refToSave |
| 495 | 495 |
) throws SQLException{
|
| ... | ... | |
| 506 | 506 |
String strNomAuthorTeamFk = String.valueOf(nomAuthorTeamFk); |
| 507 | 507 |
TeamOrPersonBase<?> nomAuthor = teamMap.get(strNomAuthorTeamFk); |
| 508 | 508 |
|
| 509 |
Reference<?> sourceReference = state.getTransactionalSourceReference();
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|
| 509 |
Reference sourceReference = state.getTransactionalSourceReference(); |
|
| 510 | 510 |
|
| 511 | 511 |
//preliminary |
| 512 | 512 |
if (isPreliminary){
|
| ... | ... | |
| 545 | 545 |
* @param referenceBase |
| 546 | 546 |
* @param nomReference |
| 547 | 547 |
*/ |
| 548 |
private void copyCreatedUpdated(Reference<?> biblioReference, Reference nomReference) {
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| 548 |
private void copyCreatedUpdated(Reference biblioReference, Reference nomReference) {
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|
| 549 | 549 |
biblioReference.setCreatedBy(nomReference.getCreatedBy()); |
| 550 | 550 |
biblioReference.setCreated(nomReference.getCreated()); |
| 551 | 551 |
biblioReference.setUpdatedBy(nomReference.getUpdatedBy()); |
| ... | ... | |
| 553 | 553 |
|
| 554 | 554 |
} |
| 555 | 555 |
|
| 556 |
private Reference<?> makeArticle (Map<String, Object> valueMap, Map<Integer, Reference> refToSave, Map<String, Reference> relatedReferences){
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|
| 556 |
private Reference makeArticle (Map<String, Object> valueMap, Map<Integer, Reference> refToSave, Map<String, Reference> relatedReferences){
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|
| 557 | 557 |
|
| 558 | 558 |
IArticle article = ReferenceFactory.newArticle(); |
| 559 | 559 |
Object inRefFk = valueMap.get("inRefFk".toLowerCase());
|
| ... | ... | |
| 569 | 569 |
logger.warn ("Article has no inreference: " + refId);
|
| 570 | 570 |
} |
| 571 | 571 |
makeStandardMapper(valueMap, (Reference)article); //url, pages, series, volume |
| 572 |
return (Reference<?>)article;
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| 572 |
return (Reference)article; |
|
| 573 | 573 |
} |
| 574 | 574 |
|
| 575 |
private Reference<?> makePartOfOtherTitle (Map<String, Object> valueMap,
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| 575 |
private Reference makePartOfOtherTitle (Map<String, Object> valueMap, |
|
| 576 | 576 |
Map<Integer, Reference> refToSave, Map<String, Reference> relatedReferences){
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| 577 | 577 |
|
| 578 |
Reference<?> result;
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| 578 |
Reference result; |
|
| 579 | 579 |
Object inRefFk = valueMap.get("inRefFk".toLowerCase());
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| 580 | 580 |
Integer inRefCategoryFk = (Integer)valueMap.get("inRefCategoryFk".toLowerCase());
|
| 581 | 581 |
Integer refId = (Integer)valueMap.get("refId".toLowerCase());
|
| ... | ... | |
| 591 | 591 |
}else if (inRefCategoryFk == REF_BOOK){
|
| 592 | 592 |
//BookSection |
| 593 | 593 |
IBookSection bookSection = ReferenceFactory.newBookSection(); |
| 594 |
result = (Reference<?>)bookSection;
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|
| 594 |
result = (Reference)bookSection; |
|
| 595 | 595 |
}else if (inRefCategoryFk == REF_ARTICLE){
|
| 596 | 596 |
//Article |
| 597 | 597 |
logger.info("Reference (refId = " + refId + ") of type 'part_of_other_title' is part of 'article'." +
|
| ... | ... | |
| 635 | 635 |
return result; |
| 636 | 636 |
} |
| 637 | 637 |
|
| 638 |
private Reference<?> makeWebSite(Map<String, Object> valueMap){
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| 638 |
private Reference makeWebSite(Map<String, Object> valueMap){
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|
| 639 | 639 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Website'");}
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| 640 |
Reference<?> webPage = ReferenceFactory.newWebPage();
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| 640 |
Reference webPage = ReferenceFactory.newWebPage(); |
|
| 641 | 641 |
makeStandardMapper(valueMap, webPage); //placePublished, publisher |
| 642 | 642 |
return webPage; |
| 643 | 643 |
} |
| 644 | 644 |
|
| 645 |
private Reference<?> makeUnknown(Map<String, Object> valueMap){
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| 645 |
private Reference makeUnknown(Map<String, Object> valueMap){
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| 646 | 646 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Unknown'");}
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| 647 |
Reference<?> generic = ReferenceFactory.newGeneric();
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| 647 |
Reference generic = ReferenceFactory.newGeneric(); |
|
| 648 | 648 |
// generic.setSeries(series); |
| 649 | 649 |
makeStandardMapper(valueMap, generic); //pages, placePublished, publisher, series, volume |
| 650 | 650 |
return generic; |
| 651 | 651 |
} |
| 652 | 652 |
|
| 653 |
private Reference<?> makeInformal(Map<String, Object> valueMap){
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| 653 |
private Reference makeInformal(Map<String, Object> valueMap){
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| 654 | 654 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Informal'");}
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| 655 |
Reference<?> generic = ReferenceFactory.newGeneric();
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| 655 |
Reference generic = ReferenceFactory.newGeneric(); |
|
| 656 | 656 |
// informal.setSeries(series); |
| 657 | 657 |
makeStandardMapper(valueMap, generic);//editor, pages, placePublished, publisher, series, volume |
| 658 | 658 |
String informal = (String)valueMap.get("InformalRefCategory".toLowerCase());
|
| ... | ... | |
| 662 | 662 |
return generic; |
| 663 | 663 |
} |
| 664 | 664 |
|
| 665 |
private Reference<?> makeDatabase(Map<String, Object> valueMap){
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| 665 |
private Reference makeDatabase(Map<String, Object> valueMap){
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| 666 | 666 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Database'");}
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| 667 |
Reference<?> database = ReferenceFactory.newDatabase();
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| 667 |
Reference database = ReferenceFactory.newDatabase(); |
|
| 668 | 668 |
makeStandardMapper(valueMap, database); //? |
| 669 | 669 |
return database; |
| 670 | 670 |
} |
| 671 | 671 |
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| 672 |
private Reference<?> makeJournal(Map<String, Object> valueMap){
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| 672 |
private Reference makeJournal(Map<String, Object> valueMap){
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| 673 | 673 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Journal'");}
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| 674 |
Reference<?> journal = ReferenceFactory.newJournal();
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| 674 |
Reference journal = ReferenceFactory.newJournal(); |
|
| 675 | 675 |
|
| 676 | 676 |
Set<String> omitAttributes = new HashSet<String>(); |
| 677 | 677 |
String series = "series"; |
| ... | ... | |
| 684 | 684 |
return journal; |
| 685 | 685 |
} |
| 686 | 686 |
|
| 687 |
private Reference<?> makeBook(
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| 687 |
private Reference makeBook( |
|
| 688 | 688 |
Map<String, Object> valueMap, |
| 689 | 689 |
Map<Integer, Reference> refToSave, |
| 690 | 690 |
Map<String, Reference> relatedReferences){
|
| 691 | 691 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Book'");}
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| 692 |
Reference<?> book = ReferenceFactory.newBook();
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| 692 |
Reference book = ReferenceFactory.newBook(); |
|
| 693 | 693 |
Integer refId = (Integer)valueMap.get("refId".toLowerCase());
|
| 694 | 694 |
|
| 695 | 695 |
//Set bookAttributes = new String[]{"edition", "isbn", "pages","publicationTown","publisher","volume"};
|
| ... | ... | |
| 729 | 729 |
* @param relatedNomReferences |
| 730 | 730 |
* @return |
| 731 | 731 |
*/ |
| 732 |
private Reference<?> getReferenceFromMaps(
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| 732 |
private Reference getReferenceFromMaps( |
|
| 733 | 733 |
int inRefFkInt, |
| 734 | 734 |
Map<Integer, Reference> refToSaveMap, |
| 735 | 735 |
Map<String, Reference> relatedRefMap) {
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| 736 |
Reference<?> result = null;
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| 736 |
Reference result = null; |
|
| 737 | 737 |
result = refToSaveMap.get(inRefFkInt); |
| 738 | 738 |
if (result == null){
|
| 739 | 739 |
result = relatedRefMap.get(String.valueOf(inRefFkInt)); |
| ... | ... | |
| 741 | 741 |
return result; |
| 742 | 742 |
} |
| 743 | 743 |
|
| 744 |
private Reference<?> makePrintSeries(Map<String, Object> valueMap){
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| 744 |
private Reference makePrintSeries(Map<String, Object> valueMap){
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| 745 | 745 |
if (logger.isDebugEnabled()){logger.debug("RefType 'PrintSeries'");}
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| 746 |
Reference<?> printSeries = ReferenceFactory.newPrintSeries();
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| 746 |
Reference printSeries = ReferenceFactory.newPrintSeries(); |
|
| 747 | 747 |
makeStandardMapper(valueMap, printSeries, null); |
| 748 | 748 |
return printSeries; |
| 749 | 749 |
} |
| 750 | 750 |
|
| 751 |
private Reference<?> makeProceedings(Map<String, Object> valueMap){
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| 751 |
private Reference makeProceedings(Map<String, Object> valueMap){
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| 752 | 752 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Proceedings'");}
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| 753 |
Reference<?> proceedings = ReferenceFactory.newProceedings();
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| 753 |
Reference proceedings = ReferenceFactory.newProceedings(); |
|
| 754 | 754 |
makeStandardMapper(valueMap, proceedings, null); |
| 755 | 755 |
return proceedings; |
| 756 | 756 |
} |
| 757 | 757 |
|
| 758 |
private Reference<?> makeThesis(Map<String, Object> valueMap){
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| 758 |
private Reference makeThesis(Map<String, Object> valueMap){
|
|
| 759 | 759 |
if (logger.isDebugEnabled()){logger.debug("RefType 'Thesis'");}
|
| 760 |
Reference<?> thesis = ReferenceFactory.newThesis();
|
|
| 760 |
Reference thesis = ReferenceFactory.newThesis(); |
|
| 761 | 761 |
makeStandardMapper(valueMap, thesis, null); |
| 762 | 762 |
return thesis; |
| 763 | 763 |
} |
| 764 | 764 |
|
| 765 | 765 |
|
| 766 |
private Reference<?> makeJournalVolume(Map<String, Object> valueMap){
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| 766 |
private Reference makeJournalVolume(Map<String, Object> valueMap){
|
|
| 767 | 767 |
if (logger.isDebugEnabled()){logger.debug("RefType 'JournalVolume'");}
|
| 768 | 768 |
//Proceedings proceedings = Proceedings.NewInstance(); |
| 769 |
Reference<?> journalVolume = ReferenceFactory.newGeneric();
|
|
| 769 |
Reference journalVolume = ReferenceFactory.newGeneric(); |
|
| 770 | 770 |
makeStandardMapper(valueMap, journalVolume, null); |
| 771 | 771 |
logger.warn("Journal volumes not yet implemented. Generic created instead but with errors");
|
| 772 | 772 |
return journalVolume; |
| 773 | 773 |
} |
| 774 | 774 |
|
| 775 |
private boolean makeStandardMapper(Map<String, Object> valueMap, Reference<?> ref){
|
|
| 775 |
private boolean makeStandardMapper(Map<String, Object> valueMap, Reference ref){
|
|
| 776 | 776 |
return makeStandardMapper(valueMap, ref, null); |
| 777 | 777 |
} |
| 778 | 778 |
|
Also available in: Unified diff
Remove generics from Reference in cdmlib-app #5830