EDIT

/**

* Copyright (C) 2007 EDIT

* European Distributed Institute of Taxonomy 

* http://www.e-taxonomy.eu

* 

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.app.berlinModelImport;

import java.util.UUID;

import org.apache.log4j.Logger;

import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration;

import eu.etaxonomy.cdm.app.common.CdmDestinations;

import eu.etaxonomy.cdm.database.DbSchemaValidation;

import eu.etaxonomy.cdm.database.ICdmDataSource;

import eu.etaxonomy.cdm.io.berlinModel.in.BerlinModelImportConfigurator;

import eu.etaxonomy.cdm.io.common.CdmDefaultImport;

import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;

import eu.etaxonomy.cdm.io.common.IImportConfigurator.DO_REFERENCES;

import eu.etaxonomy.cdm.io.common.Source;

import eu.etaxonomy.cdm.model.description.Feature;

import eu.etaxonomy.cdm.model.description.FeatureNode;

import eu.etaxonomy.cdm.model.description.FeatureTree;

import eu.etaxonomy.cdm.model.name.NomenclaturalCode;

/**

 * TODO add the following to a wiki page:

 * HINT: If you are about to import into a mysql data base running under windows and if you wish to dump and restore the resulting data bas under another operation systen 

 * you must set the mysql system variable lower_case_table_names = 0 in order to create data base with table compatible names.

 * 

 * 

 * @author a.mueller

 *

 */

public class MTMooseActivator {

	private static final Logger logger = Logger.getLogger(AlgaTerraActivator.class);

	//database validation status (create, update, validate ...)

	static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE;

	static final Source berlinModelSource = BerlinModelSources.MT_MOOSE();

//	static final ICdmDataSource cdmDestination = CdmDestinations.localH2();

//	static final ICdmDataSource cdmDestination = CdmDestinations.cdm_mt_moose();

	static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_local_mysql_moose();

	static final UUID classificationUuid = UUID.fromString("601d8a00-cffe-4509-af93-b15b543ccf8d");

	static final UUID sourceRefUuid = UUID.fromString("601d8a00-cffe-4509-af93-b15b543ccf8d");

	static final UUID featureTreeUuid = UUID.fromString("4c5b5bbe-6fef-4607-96b2-1b0104eac19e");

	static final Object[] featureKeyList = new Integer[]{7,201,202,203,204,205,206,207}; 

	//check - import

	static final CHECK check = CHECK.CHECK_AND_IMPORT;

	//NomenclaturalCode

	static final NomenclaturalCode nomenclaturalCode = NomenclaturalCode.ICNAFP;

// ****************** ALL *****************************************

	//authors

	static final boolean doAuthors = true;

	//references

	static final DO_REFERENCES doReferences =  DO_REFERENCES.ALL;

	//names

	static final boolean doTaxonNames = true;

	static final boolean doRelNames = true;

	static final boolean doNameStatus = true;

	static final boolean doTypes = true;  

	static final boolean doNameFacts = false;   //no name facts exist  

	//taxa

	static final boolean doTaxa = true;

	static final boolean doRelTaxa = true;

	static final boolean doFacts = false;    //no facts exist

	static final boolean doOccurences = false;   //no occurrences exist

	static final boolean doCommonNames = false;  //nocommon names exist

// ************************ NONE **************************************** //

//	//authors

//	static final boolean doAuthors = false;

//	//references

//	static final DO_REFERENCES doReferences =  DO_REFERENCES.NONE;

//	//names

//	static final boolean doTaxonNames = false;

//	static final boolean doRelNames = false;

//	static final boolean doNameStatus = false;

//	static final boolean doTypes = false;

//	static final boolean doNameFacts = false;

//	

//	//taxa

//	static final boolean doTaxa = false;

//	static final boolean doRelTaxa = false;

//	static final boolean doFacts = false;

//	static final boolean doOccurences = false;

//	static final boolean doCommonNames = false;

	public void invoke(String[] args){

		System.out.println("Start import from BerlinModel("+ berlinModelSource.getDatabase() + ") ...");

		logger.debug("Start");

		//make BerlinModel Source

		Source source = berlinModelSource;

		ICdmDataSource destination = CdmDestinations.chooseDestination(args) != null ? CdmDestinations.chooseDestination(args) : cdmDestination;

		BerlinModelImportConfigurator bmImportConfigurator = BerlinModelImportConfigurator.NewInstance(source,  destination);

		bmImportConfigurator.setClassificationUuid(classificationUuid);

//		bmImportConfigurator.setSourceSecId(sourceSecId);

		bmImportConfigurator.setNomenclaturalCode(nomenclaturalCode);

		bmImportConfigurator.setDoAuthors(doAuthors);

		bmImportConfigurator.setDoReferences(doReferences);

		bmImportConfigurator.setDoTaxonNames(doTaxonNames);

		bmImportConfigurator.setDoRelNames(doRelNames);

		bmImportConfigurator.setDoNameStatus(doNameStatus);

		bmImportConfigurator.setDoTypes(doTypes);

		bmImportConfigurator.setDoNameFacts(doNameFacts);

		bmImportConfigurator.setDoTaxa(doTaxa);

		bmImportConfigurator.setDoRelTaxa(doRelTaxa);

		bmImportConfigurator.setDoFacts(doFacts);

		bmImportConfigurator.setDoOccurrence(doOccurences);

		bmImportConfigurator.setDoCommonNames(doCommonNames);

		bmImportConfigurator.setSourceRefUuid(sourceRefUuid);

		bmImportConfigurator.setDbSchemaValidation(hbm2dll);

		bmImportConfigurator.setCheck(check);

		// invoke import

		CdmDefaultImport<BerlinModelImportConfigurator> bmImport = new CdmDefaultImport<BerlinModelImportConfigurator>();

		bmImport.invoke(bmImportConfigurator);

		if (doFacts && (bmImportConfigurator.getCheck().equals(CHECK.CHECK_AND_IMPORT)  || bmImportConfigurator.getCheck().equals(CHECK.IMPORT_WITHOUT_CHECK) )   ){

			ICdmApplicationConfiguration app = bmImport.getCdmAppController();

			//make feature tree

			FeatureTree tree = TreeCreator.flatTree(featureTreeUuid, bmImportConfigurator.getFeatureMap(), featureKeyList);

			FeatureNode distributionNode = FeatureNode.NewInstance(Feature.DISTRIBUTION());

			tree.getRoot().addChild(distributionNode, 0); 

			app.getFeatureTreeService().saveOrUpdate(tree);

		}

		System.out.println("End import from BerlinModel ("+ source.getDatabase() + ")...");

	}

	/**

	 * @param args

	 */

	public static void main(String[] args) {

		MTMooseActivator activator = new MTMooseActivator();

		activator.invoke(args);

	}

}