Revision 67426b79
Added by Andreas Müller over 4 years ago
| cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiSourceExport.java | ||
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import java.sql.SQLException; |
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import java.util.ArrayList; |
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import java.util.EnumSet; |
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import java.util.HashSet; |
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import java.util.List; |
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import java.util.Set; |
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import eu.etaxonomy.cdm.model.common.ExtensionType; |
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import eu.etaxonomy.cdm.model.common.IdentifiableSource; |
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import eu.etaxonomy.cdm.model.reference.Reference; |
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import eu.etaxonomy.cdm.model.reference.ReferenceType; |
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/** |
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* The export class for {@link eu.etaxonomy.cdm.model.reference.Reference References}.<p>
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String result = null; |
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try {
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if (reference != null) {
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Set<IdentifiableSource> sourceAll = reference.getSources(); |
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Set<IdentifiableSource> sourceCandidates = filterOriginalPesiDbSources(sourceAll);
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if (sourceCandidates.size() == 1) {
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result = sourceCandidates.iterator().next().getIdInSource(); |
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} else if (sourceCandidates.size() > 1) {
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logger.warn("Reference for RefIdInSource has multiple IdentifiableSources which are candidates for a PESI originalDbSource. RefIdInSource can't be determined correctly and will be left out: " + reference.getUuid() + " (" + reference.getTitleCache() + ")");
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int count = 1; |
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// for (IdentifiableSource source : sources) {
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// result += source.getIdInSource(); |
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// if (count < sources.size()) {
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// result += "; "; |
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// } |
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// count++; |
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// } |
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} |
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} |
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if (reference != null) {
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Set<IdentifiableSource> sourceAll = reference.getSources();
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Set<IdentifiableSource> sourceCandidates = filterPesiSources(sourceAll);
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if (sourceCandidates.size() == 1) {
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result = sourceCandidates.iterator().next().getIdInSource();
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} else if (sourceCandidates.size() > 1) {
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logger.warn("Reference for RefIdInSource has multiple IdentifiableSources which are candidates for a PESI originalDbSource. RefIdInSource can't be determined correctly and will be left out: " + reference.getUuid() + " (" + reference.getTitleCache() + ")");
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int count = 1;
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// for (IdentifiableSource source : sources) {
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// result += source.getIdInSource();
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// if (count < sources.size()) {
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// result += "; ";
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// }
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// count++;
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// }
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}
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}
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} catch (Exception e) {
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e.printStackTrace(); |
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} |
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return result; |
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} |
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private static Set<IdentifiableSource> filterOriginalPesiDbSources( |
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Set<IdentifiableSource> sourceAll) {
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Set<IdentifiableSource> sourceCandidates = new HashSet<>(); |
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for (IdentifiableSource source : sourceAll){
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if (isOriginalPesiDbSource(source)){
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sourceCandidates.add(source); |
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} |
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} |
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return sourceCandidates; |
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} |
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private static boolean isOriginalPesiDbSource(IdentifiableSource source) {
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return (source.getCitation() != null) && |
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source.getCitation().getType().equals(ReferenceType.Database); |
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} |
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// private static Set<IdentifiableSource> filterOriginalPesiDbSources(
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// Set<IdentifiableSource> sourceAll) {
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// Set<IdentifiableSource> sourceCandidates = new HashSet<>();
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// for (IdentifiableSource source : sourceAll){
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// if (isOriginalPesiDbSource(source)){
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// sourceCandidates.add(source);
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// }
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// }
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// return sourceCandidates;
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// }
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// |
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// private static boolean isOriginalPesiDbSource(IdentifiableSource source) {
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// return (source.getCitation() != null) &&
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// source.getCitation().getType().equals(ReferenceType.Database);
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// }
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/** |
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* Returns the <code>OriginalDB</code> attribute. |
Also available in: Unified diff
ref #2717 adapt PesiExport to EuroMed requirements and adapt PesiExportActivatorEM