Revision 5d5e8580
Added by Andreas Müller over 9 years ago
| app-import/src/main/java/eu/etaxonomy/cdm/io/cyprus/CyprusDistributionImport.java | ||
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import eu.etaxonomy.cdm.api.service.pager.Pager; |
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import eu.etaxonomy.cdm.common.CdmUtils; |
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import eu.etaxonomy.cdm.io.common.TdwgAreaProvider; |
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import eu.etaxonomy.cdm.io.common.mapping.IInputTransformer; |
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import eu.etaxonomy.cdm.io.common.mapping.UndefinedTransformerMethodException; |
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import eu.etaxonomy.cdm.io.excel.common.ExcelImporterBase; |
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import eu.etaxonomy.cdm.model.description.DescriptionBase; |
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import eu.etaxonomy.cdm.model.description.DescriptionElementBase; |
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import eu.etaxonomy.cdm.model.description.Distribution; |
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTermBase; |
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import eu.etaxonomy.cdm.model.description.PresenceTerm; |
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm; |
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import eu.etaxonomy.cdm.model.description.TaxonDescription; |
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import eu.etaxonomy.cdm.model.location.Country; |
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import eu.etaxonomy.cdm.model.location.NamedArea; |
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import eu.etaxonomy.cdm.model.location.NamedAreaLevel; |
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import eu.etaxonomy.cdm.model.location.NamedAreaType; |
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import eu.etaxonomy.cdm.model.location.Country; |
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import eu.etaxonomy.cdm.model.name.BotanicalName; |
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import eu.etaxonomy.cdm.model.reference.Reference; |
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import eu.etaxonomy.cdm.model.reference.ReferenceFactory; |
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// TaxonDescription description = getTaxonDescription(taxon, NO_IMAGE_GALLERY, CREATE); |
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TaxonDescription description = getNewDescription(state, taxon); |
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PresenceAbsenceTermBase<?> status = getStatus(taxon);
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PresenceAbsenceTerm status = getStatus(taxon); |
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status = removeDoubtfulStatus(status); |
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removeDistributions(taxon); |
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|
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return desc; |
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} |
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private PresenceAbsenceTermBase<?> indigenousStatus;
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private PresenceAbsenceTermBase<?> casualStatus;
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private PresenceAbsenceTermBase<?> nonInvasiveStatus;
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private PresenceAbsenceTermBase<?> invasiveStatus;
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private PresenceAbsenceTermBase<?> questionableStatus;
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private PresenceAbsenceTerm indigenousStatus; |
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private PresenceAbsenceTerm casualStatus; |
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private PresenceAbsenceTerm nonInvasiveStatus; |
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private PresenceAbsenceTerm invasiveStatus; |
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private PresenceAbsenceTerm questionableStatus; |
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private PresenceAbsenceTermBase<?> removeDoubtfulStatus(PresenceAbsenceTermBase<?> status) {
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private PresenceAbsenceTerm removeDoubtfulStatus(PresenceAbsenceTerm status) {
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if (status == null){
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return null; |
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} |
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}else if (status.getUuid().equals(CyprusTransformer.questionableDoubtfulUuid)){
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status = questionableStatus; |
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}else if (status.getUuid().equals(CyprusTransformer.cultivatedDoubtfulUuid)){
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status = PresenceTerm.CULTIVATED(); |
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status = PresenceAbsenceTerm.CULTIVATED();
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} |
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return status; |
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} |
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private PresenceAbsenceTermBase<?> getStatus(Taxon taxon) {
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Set<PresenceAbsenceTermBase<?>> statusSet = new HashSet<PresenceAbsenceTermBase<?>>();
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private PresenceAbsenceTerm getStatus(Taxon taxon) {
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Set<PresenceAbsenceTerm> statusSet = new HashSet<PresenceAbsenceTerm>();
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Set<Distribution> existingDistributions = getExistingDistributions(taxon); |
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if (existingDistributions.size() > 1){
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logger.warn("There is more than 1 distribution: " + taxon.getTitleCache());
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} |
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for (Distribution distribution: existingDistributions){
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PresenceAbsenceTermBase<?> status = distribution.getStatus();
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PresenceAbsenceTerm status = distribution.getStatus(); |
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statusSet.add(status); |
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} |
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|
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* |
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*/ |
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private void loadStatus() {
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indigenousStatus = (PresenceTerm)getTermService().find(CyprusTransformer.indigenousUuid); |
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casualStatus = (PresenceTerm)getTermService().find(CyprusTransformer.casualUuid); |
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nonInvasiveStatus = (PresenceTerm)getTermService().find(CyprusTransformer.nonInvasiveUuid); |
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invasiveStatus = (PresenceTerm)getTermService().find(CyprusTransformer.invasiveUuid); |
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questionableStatus = (PresenceTerm)getTermService().find(CyprusTransformer.questionableUuid); |
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indigenousStatus = (PresenceAbsenceTerm)getTermService().find(CyprusTransformer.indigenousUuid);
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casualStatus = (PresenceAbsenceTerm)getTermService().find(CyprusTransformer.casualUuid);
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nonInvasiveStatus = (PresenceAbsenceTerm)getTermService().find(CyprusTransformer.nonInvasiveUuid);
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invasiveStatus = (PresenceAbsenceTerm)getTermService().find(CyprusTransformer.invasiveUuid);
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questionableStatus = (PresenceAbsenceTerm)getTermService().find(CyprusTransformer.questionableUuid);
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} |
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/** |
Also available in: Unified diff
adapt app-import to model 3.4.1