Revision 5643a5ae
Added by Andreas Müller over 11 years ago
| app-import/src/main/java/eu/etaxonomy/cdm/io/globis/GlobisCurrentSpeciesImport.java | ||
|---|---|---|
| 216 | 216 |
|
| 217 | 217 |
handleCommonNames(state, rs, species); |
| 218 | 218 |
|
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this.doIdCreatedUpdatedNotes(state, species, rs, taxonId, REFERENCE_NAMESPACE);
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this.doIdCreatedUpdatedNotes(state, species, rs, taxonId, TAXON_NAMESPACE);
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| 220 | 220 |
|
| 221 | 221 |
objectsToSave.add(species); |
| 222 | 222 |
|
| ... | ... | |
| 253 | 253 |
countryStr = normalizeCountry(countryStr); |
| 254 | 254 |
} |
| 255 | 255 |
|
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WaterbodyOrCountry country = WaterbodyOrCountry.getWaterbodyOrCountryByLabel(countryStr); |
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| 257 |
if (country == null){
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try {
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country = (WaterbodyOrCountry)state.getTransformer().getNamedAreaByKey(countryStr); |
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} catch (UndefinedTransformerMethodException e) {
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e.printStackTrace(); |
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} |
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} |
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WaterbodyOrCountry country = getCountry(state, countryStr); |
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| 264 | 257 |
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| 265 | 258 |
if (country != null){
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| 266 | 259 |
TaxonDescription desc = getTaxonDescription(species, state.getTransactionalSourceReference(), false, true); |
| ... | ... | |
| 274 | 267 |
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| 275 | 268 |
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| 276 | 269 |
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|
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| 278 | 270 |
/** |
| 279 | 271 |
* @param countryStr |
| 280 | 272 |
* @return |
| ... | ... | |
| 362 | 354 |
taxon = Taxon.NewInstance(name, state.getTransactionalSourceReference()); |
| 363 | 355 |
|
| 364 | 356 |
taxonMap.put(key, taxon); |
| 365 |
handleAuthor(author, name); |
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| 357 |
handleAuthorAndYear(author, name);
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|
| 366 | 358 |
getTaxonService().save(taxon); |
| 367 | 359 |
} |
| 368 | 360 |
|
| ... | ... | |
| 385 | 377 |
|
| 386 | 378 |
} |
| 387 | 379 |
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private INonViralNameParser parser = NonViralNameParserImpl.NewInstance(); |
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| 391 | 380 |
/* (non-Javadoc) |
| 392 | 381 |
* @see eu.etaxonomy.cdm.io.common.mapping.IMappingImport#createObject(java.sql.ResultSet, eu.etaxonomy.cdm.io.common.ImportStateBase) |
| 393 | 382 |
*/ |
| ... | ... | |
| 405 | 394 |
zooName.setInfraGenericEpithet(subGenusEpi); |
| 406 | 395 |
} |
| 407 | 396 |
zooName.setGenusOrUninomial(genusEpi); |
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handleAuthor(author, zooName); |
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handleAuthorAndYear(author, zooName);
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| 409 | 398 |
|
| 410 | 399 |
Taxon taxon = Taxon.NewInstance(zooName, state.getTransactionalSourceReference()); |
| 411 | 400 |
|
| ... | ... | |
| 415 | 404 |
|
| 416 | 405 |
|
| 417 | 406 |
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/** |
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* @param author |
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* @param zooName |
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*/ |
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private void handleAuthor(String author, ZoologicalName zooName) {
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if (isBlank(author)){
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return; |
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} |
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try {
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if(author.matches(".*\\,\\s\\[\\d{4}\\].*")){
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author = author.replace("[", "").replace("]", "");
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} |
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if (author.contains("?")){
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author = author.replace("H?bner", "H\u00fcbner");
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author = author.replace("Oberth?r", "Oberth\u00fcr");
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} |
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parser.parseAuthors(zooName, author); |
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} catch (StringNotParsableException e) {
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logger.warn("Author could not be parsed: " + author);
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zooName.setAuthorshipCache(author, true); |
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} |
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} |
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| 441 | 407 |
|
| 442 | 408 |
/* (non-Javadoc) |
| 443 | 409 |
* @see eu.etaxonomy.cdm.io.berlinModel.in.IPartitionedIO#getRelatedObjectsForPartition(java.sql.ResultSet) |
| ... | ... | |
| 465 | 431 |
} catch (SQLException e) {
|
| 466 | 432 |
throw new RuntimeException(e); |
| 467 | 433 |
} |
| 468 |
return result; } |
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return result; |
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} |
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| 469 | 436 |
|
| 470 | 437 |
/* (non-Javadoc) |
| 471 | 438 |
* @see eu.etaxonomy.cdm.io.common.CdmIoBase#doCheck(eu.etaxonomy.cdm.io.common.IImportConfigurator) |
Also available in: Unified diff
update Globis import