Revision 539b7820
Added by Andreas Müller over 5 years ago
| app-import/src/main/java/eu/etaxonomy/cdm/io/greece/FloraHellenicaTaxonImport.java | ||
|---|---|---|
| 94 | 94 |
initOtherTerms(state); |
| 95 | 95 |
|
| 96 | 96 |
String line = state.getCurrentLine() + ": "; |
| 97 |
HashMap<String, String> record = state.getOriginalRecord();
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|
| 97 |
Map<String, String> record = state.getOriginalRecord(); |
|
| 98 | 98 |
|
| 99 | 99 |
Set<String> keys = record.keySet(); |
| 100 | 100 |
for (String key: keys) {
|
| ... | ... | |
| 185 | 185 |
private void makeChorologicalCategory(SimpleExcelTaxonImportState<CONFIG> state, String line, String noStr, |
| 186 | 186 |
TaxonDescription desc) {
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| 187 | 187 |
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HashMap<String, String> record = state.getOriginalRecord();
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Map<String, String> record = state.getOriginalRecord(); |
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| 189 | 189 |
String valueStr = getValue(record, CHOROLOGICAL_CATEGOGY); |
| 190 | 190 |
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| 191 | 191 |
String value = valueStr; |
| ... | ... | |
| 260 | 260 |
*/ |
| 261 | 261 |
private void makeLifeform(SimpleExcelTaxonImportState<CONFIG> state, String line, String noStr, |
| 262 | 262 |
TaxonDescription desc) {
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HashMap<String, String> record = state.getOriginalRecord();
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Map<String, String> record = state.getOriginalRecord(); |
|
| 264 | 264 |
String value = getValue(record, LIFE_FORM); |
| 265 | 265 |
String[] splits = value.split("\\s+");
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| 266 | 266 |
if (splits.length > 2){
|
| ... | ... | |
| 309 | 309 |
*/ |
| 310 | 310 |
private void handleHabitat(SimpleExcelTaxonImportState<CONFIG> state, CategoricalData catData, String label, |
| 311 | 311 |
UUID uuidHabitat, String line, String noStr) {
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| 312 |
HashMap<String, String> record = state.getOriginalRecord();
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Map<String, String> record = state.getOriginalRecord(); |
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| 313 | 313 |
String value = getValue(record, "" + label); |
| 314 | 314 |
if (value == null){
|
| 315 | 315 |
//do nothing |
| ... | ... | |
| 354 | 354 |
* @param noStr |
| 355 | 355 |
* @return |
| 356 | 356 |
*/ |
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private Taxon makeTaxon(SimpleExcelTaxonImportState<CONFIG> state, String line, HashMap<String, String> record,
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| 357 |
private Taxon makeTaxon(SimpleExcelTaxonImportState<CONFIG> state, String line, Map<String, String> record, |
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| 358 | 358 |
String noStr) {
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| 359 | 359 |
|
| 360 | 360 |
TaxonNode familyTaxon = getFamilyTaxon(record, state); |
| ... | ... | |
| 457 | 457 |
* @return |
| 458 | 458 |
*/ |
| 459 | 459 |
private TaxonNode makeGenusNode(SimpleExcelTaxonImportState<CONFIG> state, |
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HashMap<String, String> record, String genusStr) {
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Map<String, String> record, String genusStr) {
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| 461 | 461 |
IBotanicalName name = TaxonNameFactory.NewBotanicalInstance(Rank.GENUS()); |
| 462 | 462 |
name.setGenusOrUninomial(genusStr); |
| 463 | 463 |
name = replaceNameAuthorsAndReferences(state, name); |
| ... | ... | |
| 486 | 486 |
* @param state |
| 487 | 487 |
* @return |
| 488 | 488 |
*/ |
| 489 |
private TaxonNode getFamilyTaxon(HashMap<String, String> record, SimpleExcelTaxonImportState<CONFIG> state) {
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| 489 |
private TaxonNode getFamilyTaxon(Map<String, String> record, SimpleExcelTaxonImportState<CONFIG> state) {
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| 490 | 490 |
String familyStr = getValue(record, "Family"); |
| 491 | 491 |
if (familyStr == null){
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| 492 | 492 |
return null; |
| ... | ... | |
| 518 | 518 |
* @param state |
| 519 | 519 |
* @return |
| 520 | 520 |
*/ |
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private TaxonNode getGroupTaxon(HashMap<String, String> record, SimpleExcelTaxonImportState<CONFIG> state) {
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private TaxonNode getGroupTaxon(Map<String, String> record, SimpleExcelTaxonImportState<CONFIG> state) {
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| 522 | 522 |
String groupStr = getValue(record, "Group"); |
| 523 | 523 |
if (groupStr == null){
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| 524 | 524 |
return null; |
| ... | ... | |
| 575 | 575 |
*/ |
| 576 | 576 |
private void handleDistribution(SimpleExcelTaxonImportState<CONFIG> state, |
| 577 | 577 |
TaxonDescription desc, String key, UUID uuid, String line, String id) {
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HashMap<String, String> record = state.getOriginalRecord();
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Map<String, String> record = state.getOriginalRecord(); |
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| 579 | 579 |
String value = getValue(record, key); |
| 580 | 580 |
if (value == null || value.matches("[x\\.\\?]")){
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| 581 | 581 |
NamedArea area = getNamedArea(state, uuid, null, null, null, null, null); |
| ... | ... | |
| 603 | 603 |
|
| 604 | 604 |
private void handleStatus(SimpleExcelTaxonImportState<CONFIG> state, |
| 605 | 605 |
TaxonDescription desc, String key, UUID uuid, String line, String id) {
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HashMap<String, String> record = state.getOriginalRecord();
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Map<String, String> record = state.getOriginalRecord(); |
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| 607 | 607 |
String value = getValue(record, key); |
| 608 | 608 |
DescriptionElementBase descEl; |
| 609 | 609 |
if (state.getConfig().isStatusAsDistribution()){
|
| ... | ... | |
| 654 | 654 |
private void handleSingleStatus(SimpleExcelTaxonImportState<CONFIG> state, CategoricalData catData, |
| 655 | 655 |
UUID uuidStatus, String line) {
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| 656 | 656 |
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HashMap<String, String> record = state.getOriginalRecord();
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Map<String, String> record = state.getOriginalRecord(); |
|
| 658 | 658 |
String value = getValue(record, "Status"); |
| 659 | 659 |
if (value == null || value.matches("(\\??Range-restricted|\\??Xenophyte)")){
|
| 660 | 660 |
State statusState = this.getStateTerm(state, uuidStatus, null, null, null, statusVoc); |
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