Revision 3ef2e1bd
Added by Andreas Müller over 7 years ago
| cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/out/PesiRelTaxonExport.java | ||
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import eu.etaxonomy.cdm.model.name.TaxonNameBase; |
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import eu.etaxonomy.cdm.model.taxon.Classification; |
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import eu.etaxonomy.cdm.model.taxon.Synonym; |
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import eu.etaxonomy.cdm.model.taxon.SynonymRelationship; |
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import eu.etaxonomy.cdm.model.taxon.Taxon; |
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import eu.etaxonomy.cdm.model.taxon.TaxonBase; |
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import eu.etaxonomy.cdm.model.taxon.TaxonNode; |
| ... | ... | |
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private boolean saveSynonymAndSynNameRelationships(PesiExportState state, Taxon childNodeTaxon) {
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boolean success = true; |
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for (SynonymRelationship synRel : childNodeTaxon.getSynonymRelations()) { // synonyms of accepted taxon
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Synonym synonym = synRel.getSynonym(); |
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for (Synonym synonym : childNodeTaxon.getSynonyms()) { // synonyms of accepted taxon
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TaxonNameBase<?,?> synonymTaxonName = synonym.getName(); |
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if (! isPesiTaxon(synonym)){
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logger.warn("Synonym " + synonym.getId() + " of synonym relation " + synRel.getId() + " is not a PESI taxon. Can't export relationship");
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logger.warn("Synonym " + synonym.getId() + " is not a PESI taxon. Can't export relationship");
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continue; |
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} |
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|
| ... | ... | |
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invokeSynonyms(state, synonymTaxonName); |
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try {
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if (neededValuesNotNull(synonym, state)) {
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doCount(count++, modCount, pluralString); |
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success &= mapping.invoke(synonym); |
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Set<SynonymRelationship> synonymRelations = synonym.getSynonymRelations(); |
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state.setCurrentFromObject(synonym); |
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for (SynonymRelationship synonymRelationship : synonymRelations) { //needed? Maybe to make sure that there are no partial synonym relations missed ??
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try {
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if (neededValuesNotNull(synonymRelationship, state)) {
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doCount(count++, modCount, pluralString); |
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success &= mapping.invoke(synonymRelationship); |
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} |
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} catch (SQLException e) {
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logger.error("SynonymRelationship (" + synonymRelationship.getUuid() + ") could not be stored : " + e.getMessage());
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} |
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} catch (SQLException e) {
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logger.error("Synonym (" + synonym.getUuid() + ") could not be stored : " + e.getMessage());
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} |
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// SynonymNameRelationship |
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success &= saveNameRelationships(state, synonym); |
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} |
| ... | ... | |
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} |
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} |
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private boolean neededValuesNotNull(Synonym synonym, PesiExportState state) {
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boolean result = true; |
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if (getTaxonFk1(synonym, state) == null) {
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logger.warn("TaxonFk1 is NULL, but is not allowed to be. Therefore no record was written to export database for this relationship: " + relationship.getUuid());
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result = false; |
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} |
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return result; |
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} |
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/** |
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* Checks whether needed values for an entity are NULL. |
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* @return |
Also available in: Unified diff
ref #5974 Remove synonym relationships (not finished yet)