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Revision 3ef2e1bd

Added by Andreas Müller over 7 years ago

ref #5974 Remove synonym relationships (not finished yet)

View differences:

app-import/src/main/java/eu/etaxonomy/cdm/io/edaphobase/EdaphobaseSynonymyImport.java
24 24 
import eu.etaxonomy.cdm.model.common.CdmBase;
25 25 
import eu.etaxonomy.cdm.model.reference.Reference;
26 26 
import eu.etaxonomy.cdm.model.taxon.Synonym;
27 
import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
27 
import eu.etaxonomy.cdm.model.taxon.SynonymType;
28 28 
import eu.etaxonomy.cdm.model.taxon.Taxon;
29 29 
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
30 30 

  		




  ......




  41
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    private static final String tableName = "tax_synonym";


  		




  43
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  44
  
  
    
    private static final String pluralString = "synonym relationships";


  		




  
  44
  
    
    private static final String pluralString = "related synonyms";


  		




  45
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  47
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    /**


  		




  ......




  92
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                    if (synonymCandidate == null){


  		




  93
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                        logger.warn("Synonym " + synId + " not found for synonymRelations (tax_synonym): " + id);


  		




  94
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                    }else if (synonymCandidate.isInstanceOf(Taxon.class)){


  		




  95
  
  
    
                        String message = "Synonym ("+synId+") is not synonym but accepted (valid). Can't add synonym relationship for tax_synonym: "+id;


  		




  
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                        String message = "Synonym ("+synId+") is not synonym but accepted (valid). Can't add synonym for tax_synonym: "+id;


  		




  96
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                        logger.warn(message);


  		




  97
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                    }else{


  		




  98
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                        Synonym synonym = CdmBase.deproxy(synonymCandidate, Synonym.class);


  		




  ......




  100
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                        if (accepted == null){


  		




  101
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                            logger.warn("Accepted(parent) taxon " + accId + " not found for tax_synonym " + id );


  		




  102
  102
  
    
                        }else if(accepted.isInstanceOf(Synonym.class)){


  		




  103
  
  
    
                            String message = "Taxon ("+accId+") is not accepted but synonym. Can't add synonym relationship for tax_synonym: "+id;


  		




  
  103
  
    
                            String message = "Taxon ("+accId+") is not accepted but synonym. Can't add synonym for tax_synonym: "+id;


  		




  104
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                            logger.warn(message);


  		




  105
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                        }else{


  		




  106
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                            Taxon taxon = CdmBase.deproxy(accepted, Taxon.class);


  		




  107
  
  
    
                            taxon.addSynonym(synonym, SynonymRelationshipType.SYNONYM_OF());


  		




  
  107
  
    
                            taxon.addSynonym(synonym, SynonymType.SYNONYM_OF());


  		




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                            taxaToSave.add(synonym);


  		




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                            taxaToSave.add(taxon);


  		




  110
  110
  
    
                        }


  		












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