EDIT

/**

* Copyright (C) 2023 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.cdm.io.caryo;

import java.util.HashMap;

import java.util.HashSet;

import java.util.Map;

import java.util.Set;

import eu.etaxonomy.cdm.common.DoubleResult;

import eu.etaxonomy.cdm.io.mexico.SimpleExcelTaxonImport;

import eu.etaxonomy.cdm.io.mexico.SimpleExcelTaxonImportState;

import eu.etaxonomy.cdm.model.name.TaxonName;

import eu.etaxonomy.cdm.model.reference.Reference;

import eu.etaxonomy.cdm.model.taxon.Taxon;

/**

 * @author a.mueller

 * @date 02.02.2023

 */

public abstract class CaryoSileneaeImportBase extends SimpleExcelTaxonImport<CaryoSileneaeImportConfigurator> {

    private static final long serialVersionUID = -299606747509423614L;

    private Reference secRef = null;

    protected static Map<Integer,TaxonName> nameMap = new HashMap<>();

    private static Map<Integer,Taxon> taxonMap = new HashMap<>();

    protected static Map<Integer,TaxonName> origNameMap = new HashMap<>();

    protected static Map<Integer,TaxonName> orphanedNameMap = new HashMap<>();

    protected static Set<TaxonName> origSpellingNames = new HashSet<>();

    protected static Map<Integer, Integer> accIdMap = new HashMap<>();

    protected static Map<Integer,DoubleResult<String,String>> origPublicationMap = new HashMap<>();

    protected Taxon getTaxon(Integer taxonLinkId) {

        return taxonMap.get(taxonLinkId);

    }

    protected TaxonName getName(Integer nameLinkId) {

        return nameMap.get(nameLinkId);

    }

    protected void putToNameMap(Integer id, TaxonName name) {

        nameMap.put(id, name);

        origNameMap.put(id, name);

        orphanedNameMap.put(id, name);

    }

    protected void putToTaxonMap(Integer id, Taxon taxon) {

        taxonMap.put(id, taxon);

    }

    protected Reference getSecRef(SimpleExcelTaxonImportState<CaryoSileneaeImportConfigurator> state) {

        if (secRef == null){

            secRef = getReferenceService().find(state.getConfig().getSecUuid());

        }

        return secRef;

    }

    protected void newTransaction(SimpleExcelTaxonImportState<CaryoSileneaeImportConfigurator> state) {

        commitTransaction(state.getTransactionStatus());

        secRef = null;

        state.getDeduplicationHelper().reset();

        state.setSourceReference(null);

        System.gc();

        state.setTransactionStatus(startTransaction());

    }

    protected Integer getInt(String value) {

        return isBlank(value) ? null : Integer.valueOf(value);

    }

}