Revision 2d481abb
Added by Katja Luther almost 10 years ago
| cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/faunaEuropaea/FaunaEuropaeaRelTaxonIncludeImport.java | ||
|---|---|---|
| 50 | 50 |
private static final Logger logger = Logger.getLogger(FaunaEuropaeaRelTaxonIncludeImport.class); |
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//private static final String acceptedTaxonUUID = "A9C24E42-69F5-4681-9399-041E652CF338"; // any accepted taxon uuid, taken from original fauna europaea database |
| 52 | 52 |
//private static final String acceptedTaxonUUID = "E23E6295-836A-4332-BF72-7D29949C7C60"; //faunaEu_1_3 |
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private static final String acceptedTaxonUUID = "BB9CDF6C-BBA3-4AC7-A3FD-648A14F518A0"; //for faunEu (2.4) |
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//private static final String acceptedTaxonUUID = "bab7642e-f733-4a21-848d-a15250d2f4ed"; //for faunEu (2.4) |
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private static final String acceptedTaxonUUID = "DADA6F44-B7B5-4C0A-9F32-980F54B02C36"; // for MfNFaunaEuropaea |
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private Reference<?> sourceRef; |
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private static String ALL_SYNONYM_FROM_CLAUSE = " FROM Taxon INNER JOIN Taxon AS Parent " + |
| ... | ... | |
| 108 | 109 |
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Classification tree = getClassificationFor(state, sourceRef); |
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commitTransaction(txStatus); |
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/* |
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logger.warn("Before processParentsChildren");
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ProfilerController.memorySnapshot(); |
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*/ |
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if (state.getConfig().isDoTaxonomicallyIncluded()) {
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logger.warn("Before processParentsChildren" + state.getConfig().isDoTaxonomicallyIncluded());
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//ProfilerController.memorySnapshot(); |
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if (state.getConfig().isDoTaxonomicallyIncluded()) {
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processParentsChildren(state); |
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} |
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/* |
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logger.warn("Before processMissappliedNames");
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ProfilerController.memorySnapshot(); |
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*/ |
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logger.warn("Before processMissappliedNames" + state.getConfig().isDoMisappliedNames());
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//ProfilerController.memorySnapshot(); |
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if (state.getConfig().isDoMisappliedNames()) {
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processMisappliedNames(state); |
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} |
| ... | ... | |
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logger.warn("End RelTaxon doInvoke");
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ProfilerController.memorySnapshot(); |
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*/ |
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logger.info("End making taxa...");
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logger.info("End making relationships......");
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return; |
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} |
| ... | ... | |
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} |
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} |
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} |
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rs = null; |
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if (childParentMap != null){
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logger.info("processParentsChildren... last commit");
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createAndCommitParentChildRelationships( |
| ... | ... | |
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logger.error("SQLException:" + e);
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state.setUnsuccessfull(); |
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} |
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childParentMap = null; |
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return; |
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} |
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|
| ... | ... | |
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} |
| 396 | 398 |
|
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storeSynonymRelationships(rs, count, state); |
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rs = null; |
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} catch (SQLException e) {
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logger.error("SQLException:" + e);
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state.setUnsuccessfull(); |
Also available in: Unified diff
changes in Fauna Europeae Import and Index Fungorum Import and PESI Export