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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.app.greece;
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import java.util.Collection;
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import java.util.List;
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import java.util.Map;
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import java.util.Set;
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import org.apache.log4j.Logger;
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import org.springframework.transaction.TransactionStatus;
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import eu.etaxonomy.cdm.api.application.CdmApplicationController;
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import eu.etaxonomy.cdm.app.common.CdmDestinations;
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import eu.etaxonomy.cdm.common.CdmUtils;
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import eu.etaxonomy.cdm.database.DbSchemaValidation;
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import eu.etaxonomy.cdm.database.ICdmDataSource;
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import eu.etaxonomy.cdm.io.api.application.CdmIoApplicationController;
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import eu.etaxonomy.cdm.model.common.CdmBase;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.LanguageString;
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import eu.etaxonomy.cdm.model.description.Feature;
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import eu.etaxonomy.cdm.model.description.TaxonDescription;
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import eu.etaxonomy.cdm.model.description.TextData;
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import eu.etaxonomy.cdm.model.taxon.TaxonNode;
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import eu.etaxonomy.cdm.model.taxon.TaxonNodeStatus;
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/**
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* @author a.mueller
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* @since 18.07.2020
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*/
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public class GreeceExcludedNoteDeleterActivator {
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private static final Logger logger = Logger.getLogger(GreeceExcludedNoteDeleterActivator.class);
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static final ICdmDataSource cdmDestination = CdmDestinations.cdm_local_greece();
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// static final ICdmDataSource cdmDestination = CdmDestinations.cdm_production_greece_checklist();
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static boolean testOnly = false;
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private void deleteExcludedNote(ICdmDataSource cdmDestination){
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CdmApplicationController app = CdmIoApplicationController.NewInstance(cdmDestination, DbSchemaValidation.VALIDATE);
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TransactionStatus tx = app.startTransaction();
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List<TaxonNode> list = app.getTaxonNodeService().list(TaxonNode.class, null, null, null, null);
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for (TaxonNode taxonNode : list){
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if (!taxonNode.getStatusNote().isEmpty()){
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Collection<LanguageString> nodeNotes = taxonNode.getStatusNote().values();
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if (nodeNotes.size() > 1){
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logger.warn("More than 1 language reprepresentation exists. Taxon not handled. NodeId: " + taxonNode.getId());
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}else{
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String noteStr = nodeNotes.iterator().next().getText();
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if (taxonNode.getStatus() != TaxonNodeStatus.EXCLUDED){
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logger.warn("NoteStr exists but status was not 'excluded' but " + taxonNode.getStatus() + "; " + taxonNode.getTaxon().getName().getTitleCache() + "; NodeId: " + taxonNode.getId());
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continue;
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}
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Set<TextData> descrNote = taxonNode.getTaxon().getDescriptionItems(Feature.NOTES(), TextData.class);
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if (descrNote.size()>1){
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logger.warn("More than 1 language reprepresentation exists. Taxon not handled. Taxon: " + taxonNode.getTaxon().getName().getTitleCache() + "; NodeId: " + taxonNode.getId());
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}else if (descrNote.isEmpty()){
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logger.warn("No description note found. Taxon: "+ taxonNode.getTaxon().getName().getTitleCache() + "; NodeId: " + taxonNode.getId());
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}else{
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TextData textNote = descrNote.iterator().next();
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Map<Language, LanguageString> multiText = textNote.getMultilanguageText();
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if (multiText == null ||multiText.isEmpty()){
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logger.warn("MultiText is empty or null. NodeId: " + taxonNode.getId());
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}else if (multiText.values().size() > 1){
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logger.warn("More than 1 language exists for multitext. Taxon not handled. NodeId: " + taxonNode.getId());
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}else{
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String singleText = multiText.values().iterator().next().getText();
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if (CdmUtils.nullSafeEqual(noteStr, singleText)){
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TaxonDescription description = CdmBase.deproxy(textNote.getInDescription(), TaxonDescription.class);
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description.removeElement(textNote);
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if (description.getElements().isEmpty()){
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app.getDescriptionService().deleteDescription(description);
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// logger.warn("Removed description. " + taxonNode.getTaxon().getName().getTitleCache() + "; " + taxonNode.getId());
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}else{
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logger.warn("Removed. " + taxonNode.getTaxon().getName().getTitleCache() + "; " + taxonNode.getId());
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}
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}else{
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logger.warn("NoteStr and textNote exist but differ. NoteStr: " + noteStr + "; textNote: "+ textNote + "; Taxon: " + taxonNode.getTaxon().getName().getTitleCache() + "; TaxonNode id: " + taxonNode.getId());
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}
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}
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}
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}
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}
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}
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if (testOnly){
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tx.setRollbackOnly();
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}
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app.commitTransaction(tx);
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}
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public static void main(String[] args) {
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GreeceExcludedNoteDeleterActivator me = new GreeceExcludedNoteDeleterActivator();
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try {
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me.deleteExcludedNote(cdmDestination);
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} catch (Exception e) {
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e.printStackTrace();
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}
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System.exit(0);
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}
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}
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