EDIT

/**

 * Copyright (C) 2007 EDIT

 * European Distributed Institute of Taxonomy 

 * http://www.e-taxonomy.eu

 * 

 * The contents of this file are subject to the Mozilla Public License Version 1.1

 * See LICENSE.TXT at the top of this package for the full license terms.

 */

package eu.etaxonomy.cdm.app.synthesysImport;

import java.net.URI;

import java.net.URISyntaxException;

import org.apache.log4j.Logger;

import eu.etaxonomy.cdm.app.common.CdmDestinations;

import eu.etaxonomy.cdm.database.DbSchemaValidation;

import eu.etaxonomy.cdm.database.ICdmDataSource;

import eu.etaxonomy.cdm.io.common.CdmDefaultImport;

import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;

import eu.etaxonomy.cdm.io.specimen.excel.in.SpecimenSynthesysExcelImportConfigurator;

public class SpecimenImportActivator {

	@SuppressWarnings("unused")

	private static Logger logger = Logger.getLogger(SpecimenImportActivator.class);

	//database validation status (create, update, validate ...)

	static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE;

	final static String excelSource = "/home/patricia/Desktop/CDMtabular6493890c4d_18_11_08.xls";

//	final static String xmlSource = "C:\\localCopy\\eclipse\\cdmlib\\app-import\\src\\main\\resources\\specimenABCD\\CDMtabular9c04a474e2_23_09_08.xls";	

	static final ICdmDataSource cdmDestination = CdmDestinations.localH2();

	//check - import

	static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK;

	/**

	 * @param args

	 */

	public static void main(String[] args) {

		URI source;

		try {

			source = new URI(excelSource);

			System.out.println(source);

			System.out.println("Start import from  Synthesys Specimen data("+ source.toString() + ") ...");

			ICdmDataSource destination = cdmDestination;

			SpecimenSynthesysExcelImportConfigurator specimenImportConfigurator = SpecimenSynthesysExcelImportConfigurator.NewInstance(source,  destination);

			specimenImportConfigurator.setSourceSecId("specimen");

			specimenImportConfigurator.setCheck(check);

			specimenImportConfigurator.setDbSchemaValidation(hbm2dll);

			specimenImportConfigurator.setDoAutomaticParsing(true);

			specimenImportConfigurator.setReUseExistingMetadata(true);

			specimenImportConfigurator.setReUseTaxon(true);

			specimenImportConfigurator.setSourceReference(null);

			specimenImportConfigurator.setTaxonReference(null);

			// invoke import

			CdmDefaultImport<SpecimenSynthesysExcelImportConfigurator> specimenImport = new CdmDefaultImport<SpecimenSynthesysExcelImportConfigurator>();

			//new Test().invoke(tcsImportConfigurator);

			specimenImport.invoke(specimenImportConfigurator);

			System.out.println("End import from SpecimenData ("+ source.toString() + ")...");

		} catch (URISyntaxException e) {

			e.printStackTrace();

		}

	}

}