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/**
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* Copyright (C) 2008 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.io.pesi.faunaEuropaea;
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import org.apache.log4j.Logger;
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import eu.etaxonomy.cdm.database.ICdmDataSource;
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import eu.etaxonomy.cdm.io.common.IImportConfigurator;
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import eu.etaxonomy.cdm.io.common.ImportConfiguratorBase;
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import eu.etaxonomy.cdm.io.common.Source;
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import eu.etaxonomy.cdm.io.common.mapping.IInputTransformer;
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import eu.etaxonomy.cdm.io.pesi.out.PesiTransformer;
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import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
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import eu.etaxonomy.cdm.model.reference.Reference;
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import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
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/**
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* @author a.babadshanjan
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* @since 08.05.2009
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*/
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public class FaunaEuropaeaImportConfigurator extends ImportConfiguratorBase<FaunaEuropaeaImportState, Source> implements IImportConfigurator {
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private static final long serialVersionUID = 3218446329444903409L;
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private static final Logger logger = Logger.getLogger(FaunaEuropaeaImportConfigurator.class);
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//TODO
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private static IInputTransformer defaultTransformer = null;
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private boolean doBasionyms = true;
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private boolean doTaxonomicallyIncluded = true;
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private boolean doMisappliedNames = true;
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private boolean doHeterotypicSynonyms = true;
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private boolean doHeterotypicSynonymsForBasionyms ;
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private boolean doOccurrence = true;
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private boolean doVernacularNames = true;
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private boolean doAssociatedSpecialists = true;
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private boolean doInferredSynonyms = true;
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public boolean isDoVernacularNames() {
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return doVernacularNames;
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}
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public void setDoVernacularNames(boolean doVernacularNames) {
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this.doVernacularNames = doVernacularNames;
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}
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public boolean isDoTypes() {
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return doTypes;
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}
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/* Max number of taxa to be saved with one service call */
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private int limitSave = 5000;
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private Reference auctReference;
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@Override
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@SuppressWarnings("unchecked")
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protected void makeIoClassList() {
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ioClassList = new Class[] {
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FaunaEuropaeaAuthorImport.class,
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FaunaEuropaeaUsersImport.class,
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FaunaEuropaeaTaxonNameImport.class,
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FaunaEuropaeaRelTaxonIncludeImport.class,
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FaunaEuropaeaDistributionImport.class,
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FaunaEuropaeaHeterotypicSynonymImport.class,
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FaunaEuropaeaRefImport.class,
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FaunaEuropaeaAdditionalTaxonDataImport.class,
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FaunaEuropaeaVernacularNamesImport.class
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};
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};
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public static FaunaEuropaeaImportConfigurator NewInstance(Source source, ICdmDataSource destination){
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return new FaunaEuropaeaImportConfigurator(source, destination);
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}
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private FaunaEuropaeaImportConfigurator(Source source, ICdmDataSource destination) {
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super(defaultTransformer);
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setSource(source);
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setDestination(destination);
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setNomenclaturalCode(NomenclaturalCode.ICZN);
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}
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// public static FaunaEuropaeaImportConfigurator NewInstance(ICdmDataSource source, ICdmDataSource destination){
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// return new FaunaEuropaeaImportConfigurator(source, destination);
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//}
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// private FaunaEuropaeaImportConfigurator(ICdmDataSource source, ICdmDataSource destination) {
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// super(defaultTransformer);
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// setSource(source);
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// setDestination(destination);
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// setNomenclaturalCode(NomenclaturalCode.ICBN);
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// }
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.ImportConfiguratorBase#getSourceReference()
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*/
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@Override
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public Reference getSourceReference() {
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//TODO
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if (this.sourceReference == null){
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logger.warn("getSource Reference not yet fully implemented");
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sourceReference = ReferenceFactory.newDatabase();
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sourceReference.setTitleCache("Fauna Europaea database", true);
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if (this.getSourceRefUuid() != null){
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sourceReference.setUuid(this.getSourceRefUuid());
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}
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}
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return sourceReference;
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.ImportConfiguratorBase#getSourceReference()
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*/
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public Reference getAuctReference() {
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//TODO
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if (auctReference == null){
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auctReference = ReferenceFactory.newPersonalCommunication();
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auctReference.setTitleCache("auct.", true);
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auctReference.setUuid(PesiTransformer.uuidSourceRefAuct);
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}
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return auctReference;
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.IImportConfigurator#getSourceNameString()
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*/
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@Override
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public String getSourceNameString() {
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if (this.getSource() == null) {
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return null;
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}else{
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return this.getSource().toString();
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}
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.common.IImportConfigurator#getNewState()
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*/
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@Override
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public FaunaEuropaeaImportState getNewState() {
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return new FaunaEuropaeaImportState(this);
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}
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/**
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* @return the doBasionyms
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*/
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public boolean isDoBasionyms() {
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return doBasionyms;
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}
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/**
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* @param doBasionyms the doBasionyms to set
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*/
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public void setDoBasionyms(boolean doBasionyms) {
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this.doBasionyms = doBasionyms;
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}
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/**
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* @return the doTaxonomicallyIncluded
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*/
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public boolean isDoTaxonomicallyIncluded() {
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return doTaxonomicallyIncluded;
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}
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/**
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* @param doTaxonomicallyIncluded the doTaxonomicallyIncluded to set
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*/
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public void setDoTaxonomicallyIncluded(boolean doTaxonomicallyIncluded) {
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this.doTaxonomicallyIncluded = doTaxonomicallyIncluded;
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}
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/**
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* @return the doMisappliedNames
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*/
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public boolean isDoMisappliedNames() {
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return doMisappliedNames;
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}
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/**
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* @param doMisappliedNames the doMisappliedNames to set
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*/
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public void setDoMisappliedNames(boolean doMisappliedNames) {
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this.doMisappliedNames = doMisappliedNames;
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}
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/**
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* @return the doHeterotypicSynonyms
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*/
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public boolean isDoHeterotypicSynonyms() {
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return doHeterotypicSynonyms;
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}
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/**
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* @param doHeterotypicSynonyms the doHeterotypicSynonyms to set
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*/
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public void setDoHeterotypicSynonyms(boolean doHeterotypicSynonyms) {
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this.doHeterotypicSynonyms = doHeterotypicSynonyms;
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}
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/**
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* @param auctReference the auctReference to set
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*/
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public void setAuctReference(Reference auctReference) {
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this.auctReference = auctReference;
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}
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/**
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* @return the limitSave
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*/
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public int getLimitSave() {
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return limitSave;
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}
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/**
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* @param limitSave the limitSave to set
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*/
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public void setLimitSave(int limitSave) {
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this.limitSave = limitSave;
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}
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/**
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* @param doHeterotypicSynonymsForBasionyms the doHeterotypicSynonymsForBasionyms to set
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*/
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public void setDoHeterotypicSynonymsForBasionyms(
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boolean doHeterotypicSynonymsForBasionyms) {
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this.doHeterotypicSynonymsForBasionyms = doHeterotypicSynonymsForBasionyms;
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}
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/**
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* @return the doHeterotypicSynonymsForBasionyms
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*/
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public boolean isDoHeterotypicSynonymsForBasionyms() {
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return doHeterotypicSynonymsForBasionyms;
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.tcsrdf.IImportConfigurator#isDoOccurrence()
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*/
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public boolean isDoOccurrence() {
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return doOccurrence;
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.cdm.io.tcsrdf.IImportConfigurator#setDoOccurrence(boolean)
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*/
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public void setDoOccurrence(boolean doOccurrence) {
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this.doOccurrence = doOccurrence;
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}
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private boolean doAuthors = true;
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//references
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private DO_REFERENCES doReferences = DO_REFERENCES.ALL;
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//names
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private final boolean doTypes = true;
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//taxa
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private boolean doTaxa = true;
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private boolean doRelTaxa = true;
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public boolean isDoAuthors() {
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return doAuthors;
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}
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public void setDoAuthors(boolean doAuthors) {
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this.doAuthors = doAuthors;
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}
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public DO_REFERENCES getDoReferences() {
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return doReferences;
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}
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public void setDoReferences(DO_REFERENCES doReferences) {
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this.doReferences = doReferences;
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}
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// public boolean isDoTypes() {
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// return doTypes;
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// }
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// public void setDoTypes(boolean doTypes) {
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// this.doTypes = doTypes;
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// }
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public boolean isDoTaxa() {
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return doTaxa;
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}
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public void setDoTaxa(boolean doTaxa) {
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this.doTaxa = doTaxa;
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}
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public boolean isDoRelTaxa() {
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return doRelTaxa;
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}
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public void setDoRelTaxa(boolean doRelTaxa) {
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this.doRelTaxa = doRelTaxa;
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}
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public boolean isDoAssociatedSpecialists() {
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return this.doAssociatedSpecialists;
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}
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public void setDoAssociatedSpecialists(boolean doAssociatedSpecialists){
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this.doAssociatedSpecialists = doAssociatedSpecialists;
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}
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/**
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* @return the doInferredSynonyms
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*/
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public boolean isDoInferredSynonyms() {
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return doInferredSynonyms;
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}
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public void setDoInferredSynonyms(boolean doInferredSynonyms){
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this.doInferredSynonyms = doInferredSynonyms;
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}
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}
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