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cdmlib-apps / app-import @ 72bde1d7

# Date Author Comment
72bde1d7 09/09/2016 08:59 AM Andreas Kohlbecker

ref #6026 handling 'Vorabdrucke' as Book Volume/Issue

9ee079fa 09/09/2016 07:36 AM Andreas Kohlbecker

ref #6026 support for making statistics on parsed type data - typo

c167aac2 09/08/2016 03:40 PM Andreas Kohlbecker

ref #6026 importing Basionyms

9cc443ab 09/08/2016 02:47 PM Andreas Kohlbecker

ref #6026 support for making statistics on parsed type data:
Type parsing statistics:
- Type: field 'Type' can not be parsed (parse problem of whole typeString)
- Type: fielUnitStr can not be parsed (parse problem of fielUnitStr)
- Type: Could not parse specimen (parse problems in holotype, isotype)

1968849d 09/08/2016 02:38 PM Andreas Kohlbecker

ref #6026 better type parsing
- FieldUnit: collector, fieldnumber, date
- Specimen: Collection, Subcollection, accession number
Does not work in all cases

64c0db54 09/07/2016 02:56 PM Andreas Kohlbecker

ref #6026 two more date parsing rules

adff9167 09/07/2016 12:20 PM Andreas Kohlbecker

ref #6026 type parsing
- parsing of specimen types

f465df63 09/06/2016 12:13 PM Andreas Kohlbecker

ref #6026 publication date parsing completed

c83f34f1 09/06/2016 08:58 AM Andreas Kohlbecker

ref #6009 improved plublication date parsing
- all dates recognized
- all months recognized
- special time spans not implemented (Winter, Fall, April-June, etc)

bde99bfd 09/06/2016 08:55 AM Andreas Kohlbecker

ref #6009 improved plublication date parsing

5c7f2505 08/30/2016 02:07 PM Andreas Kohlbecker

ref #6035 more character replacement rules

e082affd 08/30/2016 01:26 PM Andreas Kohlbecker

fix #6035 character replacement rules

b0a3a620 08/30/2016 12:46 PM Andreas Kohlbecker

removing unused code

a51be4dc 08/30/2016 11:46 AM Andreas Kohlbecker

Alternative data files

565df21b 08/04/2016 10:16 PM Andreas Kohlbecker

ref #6026 first basic import of types

1a924f2f 08/03/2016 04:09 PM Andreas Kohlbecker

ref #6026 multiple improvements
- better ranks for incertis sedis and old Classes
- Caveats as annotations

e7ed2bb6 08/03/2016 07:52 AM Andreas Kohlbecker

ref #6026 multiple improvements
- importing notes as annotations
- improved rank guessing
- solving performance problems related to classification root node
- better tilecache and nameCache plausibility checks

f261b330 08/02/2016 10:21 AM Andreas Kohlbecker

ref #6026 multiple improvements
- better handling of fossil taxa
- Authors spelling as misspellings
- fix related to publication year
- "Author abbreviation not checked" as annotations

4cebdf13 08/01/2016 04:30 PM Andreas Kohlbecker

#6026 import of taxa and names working

92ef0c45 07/27/2016 05:27 PM Andreas Kohlbecker

Fixing strange dependency problem related to spring-orm version

8bec79dd 07/27/2016 05:13 PM Andreas Kohlbecker

Initial set of classes for the IAPT import

35b4c4a3 07/26/2016 05:13 PM Andreas Kohlbecker

removing build.xml

8c25844f 07/26/2016 05:12 PM Andreas Kohlbecker

gitignore

6ab8444c 07/26/2016 05:09 PM Andreas Kohlbecker

Fixing repository settings and project group id

cc9d28ec 07/26/2016 09:01 AM Patrick Plitzner

#5448 Pass rank and nomenclatural code to name parser creation

d4f17a57 07/26/2016 08:11 AM Patrick Plitzner

#5448 Import hybrid with more than 2 parents with protected titlecache

70f3e481 07/26/2016 08:07 AM Patrick Plitzner

#5448 Add missing ranks to transformer

9e2583cf 07/25/2016 04:43 PM Patrick Plitzner

#5448 Enhance taxon name check

e3cf774c 07/25/2016 04:42 PM Patrick Plitzner

#5448 Fix import of families

c8c58de5 07/18/2016 05:05 PM Patrick Plitzner

#5448 change DB table name

ae538f84 07/18/2016 05:05 PM Patrick Plitzner

#5448 Fix import of hybrids due to merge conflicts

d5e984f6 07/18/2016 05:04 PM Patrick Plitzner

#5448 Fix potential NPEs

a6b3a090 07/18/2016 12:34 PM Patrick Plitzner

#5448 Import annotation infos
- hybrid formula
- ehrd, atlas, kart, flor, rl2015, wissk

6375d175 07/18/2016 10:44 AM Patrick Plitzner

#5448 Fix title cache and LIE issues

c0c4c356 07/18/2016 10:44 AM Patrick Plitzner

#5448 Import cultivar as CultivarPlantName

c98ea2df 07/18/2016 10:40 AM Patrick Plitzner

#5448 Add taxa to their respective families

308d3755 07/18/2016 10:40 AM Patrick Plitzner

#5448 Import families

9e7339f0 07/18/2016 10:40 AM Patrick Plitzner

#5448 javadoc

5e20e0f2 07/18/2016 10:40 AM Patrick Plitzner

#5448 Fix possible NPE

e138a102 07/18/2016 10:40 AM Patrick Plitzner

#5448 Avoid clonig of all taxa for all classifications

e85d547d 07/18/2016 10:40 AM Patrick Plitzner

#5448 Save concept relations

a4854e75 07/18/2016 10:40 AM Patrick Plitzner

#5448 typo

75733adf 07/18/2016 10:40 AM Patrick Plitzner

#5448 Set species epithet for species groups and aggregates

783428fc 07/18/2016 10:40 AM Patrick Plitzner

#5448 Move import of concept relationships to classification import
class
- there we already have the accepted taxa for the synonyms

b4aea28a 07/14/2016 08:59 AM Patrick Plitzner

#5448 Set meaningful reference names

231d88bb 07/14/2016 08:42 AM Patrick Plitzner

Small additions to import
- import nomenclatural status extra information to ruleConsidered
- refresh title cache of taxa to correctly display sec ref
- advanced title cache consistency check
- import common name with german language

1788e0c6 07/07/2016 01:03 PM Andreas Müller

Adapt cdmlib-app poms to new version

0429965c 07/06/2016 01:18 AM Andreas Müller

#5822 / #5892 Mexico rubiaceae import

1760dc20 06/29/2016 01:55 PM Andreas Müller

#5791 Adapt type of E+M vocabulary.

f02a23b5 06/21/2016 05:50 PM Patrick Plitzner

Add missing nomenclatural status and taxon relations to transformer
#5448

026fe0de 06/21/2016 05:50 PM Patrick Plitzner

Add missing taxa to related objects #5448

27434a93 06/21/2016 02:39 PM Andreas Müller

Add id_1 mapping to mexico

ad6b62ca 06/21/2016 10:35 AM Patrick Plitzner

Fix ClassCastException, improve taxon name check, fix rank evaluation
#5448

b2ce7834 06/20/2016 05:08 PM Andreas Müller

Update to mexico import #5822 / #5892

766713c7 06/20/2016 10:48 AM Patrick Plitzner

Import synonyms of other classifications #5448

e2cf0d65 06/20/2016 10:48 AM Patrick Plitzner

Set sec reference for all taxa #5448

4066cdd4 06/17/2016 11:47 PM Andreas Müller

minor

11b06c28 06/17/2016 11:47 PM Andreas Müller

First version of Mexico import #5822

a5c6f965 06/02/2016 02:19 PM Patrick Plitzner

Update version number and add itextpdf due to version depency conflict

be0841bf 06/02/2016 02:09 PM Patrick Plitzner

Improve name check for unranked taxa #5448

9301ba90 06/02/2016 02:09 PM Patrick Plitzner

Import unranked taxa #5448

b3b2515e 06/02/2016 02:09 PM Patrick Plitzner

Refactoring/code clean-up #5448

fac4774f 06/02/2016 02:09 PM Patrick Plitzner

Import common name #5448

7f40ba60 06/02/2016 02:09 PM Patrick Plitzner

Import additional hybrid variants #5448

64879c3f 05/31/2016 11:41 AM Patrick Plitzner

Set source ref for taxa #5448

cefdede1 05/30/2016 10:22 AM Patrick Plitzner

Improve taxon name check #5448

8422c0cd 05/25/2016 12:52 PM Andreas Müller

Remove generics from Reference in cdmlib-app #5830

64cd7355 05/25/2016 10:25 AM Patrick Plitzner

Improve logging messages #5448

a1c44317 05/25/2016 10:24 AM Patrick Plitzner

Add SEQNUM #5448

74525264 05/25/2016 10:24 AM Patrick Plitzner

Import hybrid formulas #5448

4ae09d10 05/24/2016 04:44 PM Patrick Plitzner

Add taxa to classifications #5448

a9cb0bc8 05/24/2016 10:28 AM Patrick Plitzner

Correctly set relationship direction #5448

bac828e0 05/24/2016 10:28 AM Patrick Plitzner

Import concept relations E, W, K, AW, AO, R, O, S #5448

f3f4d328 05/23/2016 07:41 PM Patrick Plitzner

Refactor names and taxa creation #5448

d72d4db9 05/23/2016 07:17 PM Patrick Plitzner

Add 8 more classifications #5448

48cd39f3 05/23/2016 05:53 PM Patrick Plitzner

improve taxon name check #5448
- add new string constants

c9ec6fc8 05/23/2016 04:31 PM Patrick Plitzner

Set trinomial hybrids #5448
- improve taxon name check

1726e8f0 05/23/2016 03:47 PM Patrick Plitzner

Avoid duplicate UUIDs by fixing the order of adding original sources
#5448

8f6337ac 05/22/2016 10:24 AM Patrick Plitzner

Handle hybrid names (only binomial at the moment)

268abe46 05/22/2016 10:23 AM Patrick Plitzner

Fix typo

f586dcf5 05/18/2016 03:13 PM Patrick Plitzner

Fix ClassCastException and ordering #5452

6ad13c4b 05/18/2016 02:56 PM Patrick Plitzner

Refactor constants

0b2466d9 05/18/2016 09:31 AM Patrick Plitzner

Ordering of XML elements and some refactoring #5452

60f8f830 05/11/2016 05:53 PM Patrick Plitzner

Export concept realtion type #5452

9a62ab6a 05/11/2016 05:53 PM Patrick Plitzner

Adjust import/export path #5452

33ba11bd 05/11/2016 05:53 PM Patrick Plitzner

Refactored conceptCode map and TaxonRelation map #5452

48879be4 05/11/2016 03:00 PM Andreas Müller

Update BgbmInstancesUpdater

4ed5c440 05/11/2016 10:52 AM Patrick Plitzner

Export concept relationships

e6c321b7 05/11/2016 10:52 AM Patrick Plitzner

Change imported classification name

fb87cdf0 05/10/2016 06:09 PM Patrick Plitzner

Remove unused generic and logger

4a31998d 05/10/2016 06:04 PM Patrick Plitzner

Export taxNr

a7ed8d4b 05/10/2016 04:35 PM Patrick Plitzner

Fix export of TextData

56946f39 05/10/2016 04:34 PM Patrick Plitzner

Use ISO date

da891ec9 05/10/2016 04:34 PM Patrick Plitzner

Import taxNr as identifier of taxon

c40d7820 05/10/2016 01:45 PM Patrick Plitzner

Remove supporsCategoricalData flag for TextData features

d2ca0a1c 05/10/2016 12:21 PM Patrick Plitzner

Export synonymy and TextData
- some refactoring

5dbdbb23 05/10/2016 12:21 PM Patrick Plitzner

Set root element attributes

6930747c 05/09/2016 05:45 PM Patrick Plitzner

Export features ("Eigenschaften")

3262d093 05/09/2016 05:44 PM Patrick Plitzner

Refactored term import

ff9af820 05/04/2016 05:58 PM Patrick Plitzner

Sort exported taxon list

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