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# Date Author Comment
209a4cf6 11/18/2016 04:35 PM Andreas Müller

ref #3934 Latest changes in Salvador import

805b65b2 11/18/2016 04:35 PM Andreas Müller

Adapt BgbmInstancesUpdater to new databases

70f32474 11/18/2016 04:35 PM Andreas Müller

Add nom. illeg. superfl. to allowed nom.states. without basionym in BM import

bf075ec4 11/18/2016 04:35 PM Andreas Müller

Adapt BMTaxonRelationExport to new Synonym model

12c99f84 11/18/2016 04:35 PM Andreas Müller

cleanup

8ec912fc 11/18/2016 04:26 PM Andreas Müller

Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps

13ab8f7a 11/18/2016 04:26 PM Andreas Müller

minor

92afad3d 11/10/2016 01:32 PM Andreas Müller

Merge branch 'master' of ssh://dev.e-taxonomy.eu/var/git/cdmlib-apps

Conflicts:
app-import/src/main/java/eu/etaxonomy/cdm/app/common/CdmDestinations.java
app-import/src/main/java/eu/etaxonomy/cdm/app/sdd/SDDExportActivator.java
app-import/src/main/java/eu/etaxonomy/cdm/app/sdd/SDDImportActivator.java

b6e8ecc0 11/10/2016 12:54 PM Andreas Müller

Cleanup and remove deprecated method

1ba3392b 11/10/2016 12:53 PM Andreas Müller

Update Salvador import

a6c3d024 11/07/2016 10:41 AM Andreas Kohlbecker

fix #5862 by correctly managing dependencies

f4682883 10/21/2016 02:52 PM Andreas Müller

ref #3925 fix excluded flag for Cuba

030ad7c6 10/13/2016 01:42 PM Andreas Müller

ref #5499 latest changes to Edaphobase import

3ef2e1bd 10/13/2016 01:41 PM Andreas Müller

ref #5974 Remove synonym relationships (not finished yet)

a4947270 10/13/2016 01:30 PM Andreas Müller

ref #3658 remove nomenclaturalCode

5eb888b1 09/21/2016 12:00 PM Patrick Plitzner

ref #5448 Remove unnecessary saving

a3140a55 09/21/2016 12:00 PM Patrick Plitzner

ref #5448 Enhance name checking

dd2c540b 09/20/2016 12:23 PM Andreas Kohlbecker

fix #6035 one more broken character

dc4d1922 09/20/2016 11:45 AM Andreas Kohlbecker

fix #6093 including more taxa into algea registry import

3c85c23f 09/19/2016 02:14 PM Andreas Kohlbecker

ref #6097 filter to include algae only - better match pattern

6a1ec853 09/19/2016 01:33 PM Andreas Kohlbecker

#6097 filter to include algae only

91b69818 09/19/2016 01:33 PM Andreas Kohlbecker

moving TestDatabase back to main - a couple of classes had complie errors

67432178 09/19/2016 08:16 AM Andreas Müller

move test classes in app-import

30165a24 09/17/2016 12:27 AM Andreas Kohlbecker

fix #6095 log duplicate registrations during import

ac956ff7 09/16/2016 05:20 PM Andreas Kohlbecker

fix #6094 importing 'registration' data into an Extension object

73871c73 09/16/2016 11:13 AM Andreas Kohlbecker

ref #6026 SpecimenType = FOSSIL for fossil taxa/names

046ccd06 09/16/2016 08:19 AM Andreas Kohlbecker

ref #6026 more parser improvements and tests

13ed824e 09/15/2016 10:22 PM Andreas Kohlbecker

ref #6026 more parser improvements and tests

f4ce5055 09/15/2016 05:51 PM Andreas Kohlbecker

ref #6026 improving specimenType parsers: better recognition of 'Coll. something' types

5e52d4ec 09/15/2016 05:33 PM Andreas Kohlbecker

ref #6026 solving problems in date and specimenType parsers, also implementing tests

ab85455e 09/15/2016 02:04 PM Andreas Kohlbecker

ref #6035 adding more character fixed and adding source referenence for all names

776a6d47 09/13/2016 12:12 AM Andreas Kohlbecker

ref #6026 'Coll. Lange-Bertalot..' as titleCache of Collection

74d84f79 09/13/2016 12:07 AM Andreas Kohlbecker

ref #6026 using genera as higher taxon for species

658c4382 09/12/2016 03:34 PM Andreas Kohlbecker

fix #6068

bdf849a5 09/12/2016 03:03 PM Andreas Kohlbecker

ref #6026 3 more character replacement rule

b67e063e 09/12/2016 02:36 PM Andreas Kohlbecker

ref #6026 fixing rank

945f3ef3 09/12/2016 12:36 PM Andreas Kohlbecker

ref #6026 fixing bug in publication regex pattern

438dd662 09/12/2016 12:08 PM Andreas Kohlbecker

ref #6026 speedup of import and fixing a minor bug

  • speedup by special handling for hardly to parse reference
  • minor bug during camparison of basionym names
d918758a 09/12/2016 11:33 AM Andreas Kohlbecker

ref #6026 keepgin deteced ref type in case of 'Vorabdruck'

1496a7e6 09/09/2016 04:57 PM Andreas Kohlbecker

ref #6026 NameTypes (with minor problems)

962dc999 09/09/2016 12:21 PM Andreas Kohlbecker

ref #6026 FieldUnit locality working

7a2e883f 09/09/2016 09:20 AM Andreas Kohlbecker

minor

bcc15deb 09/09/2016 09:05 AM Patrick Plitzner

#5448 Imporve name check for multiple ex authors

38b8e920 09/09/2016 09:05 AM Patrick Plitzner

#5448 Improve import of families

  • clone families for checklist
  • load in related objects method
307bc7da 09/09/2016 09:05 AM Patrick Plitzner

#5448 Change abbrev label of unranked infraspecfic rank before importing

d27fae52 09/09/2016 09:05 AM Patrick Plitzner

ref #5448 Reduce multiple ex authors to only two

abf1c13b 09/09/2016 09:05 AM Patrick Plitzner

ref #5448 Reduce multiple ex authors to only two

cf536939 09/09/2016 09:05 AM Katja Luther

adaption to specimen import changes

5c81a80c 09/09/2016 09:05 AM Patrick Plitzner

#5448 Fix import of hybrid formula

19ed9439 09/09/2016 09:05 AM Patrick Plitzner

ref #5448 code cleanup

4cb8b437 09/09/2016 09:05 AM Patrick Plitzner

#5448 Refactor hybrid name import/check

817f2688 09/09/2016 09:05 AM Patrick Plitzner

#5448 Use SEQNUM as id column

  • enhance hybrid name check
62c9db2c 09/09/2016 09:05 AM Patrick Plitzner

#5448 Import genus hybrid formulas

09549132 09/09/2016 09:05 AM Patrick Plitzner

#5448 Support corner cases

  • SPI and KMB as ranks
  • nomenclatural status type
  • HYB name checking
f39b51ab 09/09/2016 09:05 AM Patrick Plitzner

#5448 Handle rank "SPI"

1677827c 09/09/2016 09:05 AM Patrick Plitzner

#5448 Import non-CDM ranks

20fc4e0b 09/09/2016 09:05 AM Patrick Plitzner

#5448 Remove non-exisiting hybrid category

933eee97 09/09/2016 09:05 AM Patrick Plitzner

#5448 Import HYB 'nf'

1d5daa79 09/09/2016 09:05 AM Patrick Plitzner

#5448 Import rank "SAM"

48003e9f 09/09/2016 09:05 AM Andreas Müller

#6000 Use new CASUAL Method instead of deprecated INTRODUCED_ADVENTITIOUS

42c9c152 09/09/2016 09:05 AM Patrick Plitzner

#5448 Add "distinct" to SQL query as family table contains duplicate
rows

a2c424c2 09/09/2016 09:05 AM Patrick Plitzner

#5488 Improve import of family taxa

  • Load families in related object methods
4af5ff7a 09/09/2016 09:05 AM Patrick Plitzner

#5448 Fix hybrid import where specific epithets are not from same genus

6dee9f63 09/09/2016 09:05 AM Patrick Plitzner

#5448 Add family rank

71b0a23c 09/09/2016 09:05 AM Patrick Plitzner

#5448 Fix hybrid import where specific epithets are not from same genus

72bde1d7 09/09/2016 08:59 AM Andreas Kohlbecker

ref #6026 handling 'Vorabdrucke' as Book Volume/Issue

9ee079fa 09/09/2016 07:36 AM Andreas Kohlbecker

ref #6026 support for making statistics on parsed type data - typo

c167aac2 09/08/2016 03:40 PM Andreas Kohlbecker

ref #6026 importing Basionyms

9cc443ab 09/08/2016 02:47 PM Andreas Kohlbecker

ref #6026 support for making statistics on parsed type data:
Type parsing statistics:

  • Type: field 'Type' can not be parsed (parse problem of whole typeString)
  • Type: fielUnitStr can not be parsed (parse problem of fielUnitStr)
  • Type: Could not parse specimen (parse problems in holotype, isotype)
1968849d 09/08/2016 02:38 PM Andreas Kohlbecker

ref #6026 better type parsing

  • FieldUnit: collector, fieldnumber, date
  • Specimen: Collection, Subcollection, accession number Does not work in all cases
64c0db54 09/07/2016 02:56 PM Andreas Kohlbecker

ref #6026 two more date parsing rules

adff9167 09/07/2016 12:20 PM Andreas Kohlbecker

ref #6026 type parsing

  • parsing of specimen types
f465df63 09/06/2016 12:13 PM Andreas Kohlbecker

ref #6026 publication date parsing completed

c83f34f1 09/06/2016 08:58 AM Andreas Kohlbecker

ref #6009 improved plublication date parsing

  • all dates recognized
  • all months recognized
  • special time spans not implemented (Winter, Fall, April-June, etc)
bde99bfd 09/06/2016 08:55 AM Andreas Kohlbecker

ref #6009 improved plublication date parsing

5c7f2505 08/30/2016 02:07 PM Andreas Kohlbecker

ref #6035 more character replacement rules

e082affd 08/30/2016 01:26 PM Andreas Kohlbecker

fix #6035 character replacement rules

b0a3a620 08/30/2016 12:46 PM Andreas Kohlbecker

removing unused code

a51be4dc 08/30/2016 11:46 AM Andreas Kohlbecker

Alternative data files

565df21b 08/04/2016 10:16 PM Andreas Kohlbecker

ref #6026 first basic import of types

1a924f2f 08/03/2016 04:09 PM Andreas Kohlbecker

ref #6026 multiple improvements

  • better ranks for incertis sedis and old Classes
  • Caveats as annotations
e7ed2bb6 08/03/2016 07:52 AM Andreas Kohlbecker

ref #6026 multiple improvements

  • importing notes as annotations
  • improved rank guessing
  • solving performance problems related to classification root node
  • better tilecache and nameCache plausibility checks
f261b330 08/02/2016 10:21 AM Andreas Kohlbecker

ref #6026 multiple improvements

  • better handling of fossil taxa
  • Authors spelling as misspellings
  • fix related to publication year
  • "Author abbreviation not checked" as annotations
4cebdf13 08/01/2016 04:30 PM Andreas Kohlbecker

#6026 import of taxa and names working

8bec79dd 07/27/2016 05:13 PM Andreas Kohlbecker

Initial set of classes for the IAPT import

cc9d28ec 07/26/2016 09:01 AM Patrick Plitzner

#5448 Pass rank and nomenclatural code to name parser creation

d4f17a57 07/26/2016 08:11 AM Patrick Plitzner

#5448 Import hybrid with more than 2 parents with protected titlecache

70f3e481 07/26/2016 08:07 AM Patrick Plitzner

#5448 Add missing ranks to transformer

9e2583cf 07/25/2016 04:43 PM Patrick Plitzner

#5448 Enhance taxon name check

e3cf774c 07/25/2016 04:42 PM Patrick Plitzner

#5448 Fix import of families

c8c58de5 07/18/2016 05:05 PM Patrick Plitzner

#5448 change DB table name

ae538f84 07/18/2016 05:05 PM Patrick Plitzner

#5448 Fix import of hybrids due to merge conflicts

d5e984f6 07/18/2016 05:04 PM Patrick Plitzner

#5448 Fix potential NPEs

6375d175 07/18/2016 10:44 AM Patrick Plitzner

#5448 Fix title cache and LIE issues

c0c4c356 07/18/2016 10:44 AM Patrick Plitzner

#5448 Import cultivar as CultivarPlantName

c98ea2df 07/18/2016 10:40 AM Patrick Plitzner

#5448 Add taxa to their respective families

308d3755 07/18/2016 10:40 AM Patrick Plitzner

#5448 Import families

9e7339f0 07/18/2016 10:40 AM Patrick Plitzner

#5448 javadoc

5e20e0f2 07/18/2016 10:40 AM Patrick Plitzner

#5448 Fix possible NPE

e138a102 07/18/2016 10:40 AM Patrick Plitzner

#5448 Avoid clonig of all taxa for all classifications