Revision f89ecd52
Added by Andreas Müller over 1 year ago
| src/main/java/eu/etaxonomy/cdm/dataInserter/RegistrationRequiredDataInserter.java | ||
|---|---|---|
| 17 | 17 |
import java.util.Set; |
| 18 | 18 |
import java.util.UUID; |
| 19 | 19 |
|
| 20 |
import org.apache.logging.log4j.Level; |
|
| 21 | 20 |
import org.apache.logging.log4j.LogManager; |
| 22 | 21 |
import org.apache.logging.log4j.Logger; |
| 23 | 22 |
import org.hibernate.Session; |
| ... | ... | |
| 233 | 232 |
return repo.getSession(); |
| 234 | 233 |
} |
| 235 | 234 |
}; |
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LogUtils.setLevel(logger, Level.DEBUG); |
|
| 235 |
|
|
| 237 | 236 |
int chunksize = 1000; |
| 238 | 237 |
int pageIndex = 0; |
| 239 | 238 |
TransactionStatus tx; |
| 240 | 239 |
Pager<Taxon> taxonPage; |
| 241 | 240 |
List<TaxonBase> taxa = new ArrayList<>(); |
| 242 |
logger.debug("======= fixing sec refrences =========");
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|
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LogUtils.logAsDebug(logger, "======= fixing sec refrences =========");
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|
| 243 | 242 |
while(true){
|
| 244 | 243 |
tx = repo.startTransaction(false); |
| 245 | 244 |
taxonPage = repo.getTaxonService().page(Taxon.class, chunksize, pageIndex++, null, null); |
| ... | ... | |
| 254 | 253 |
repo.commitTransaction(tx); |
| 255 | 254 |
} |
| 256 | 255 |
|
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logger.debug("======= creating taxon graph =========");
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LogUtils.logAsDebug(logger, "======= creating taxon graph =========");
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|
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pageIndex = 0; |
| 259 | 258 |
Pager<TaxonName> page; |
| 260 | 259 |
while(true){
|
| ... | ... | |
| 264 | 263 |
repo.commitTransaction(tx); |
| 265 | 264 |
break; |
| 266 | 265 |
} |
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logger.debug(TAXON_GRAPH_CREATE + ": chunk " + pageIndex + "/" + Math.ceil(page.getCount() / chunksize));
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|
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LogUtils.logAsDebug(logger, TAXON_GRAPH_CREATE + ": chunk " + pageIndex + "/" + Math.ceil(page.getCount() / chunksize));
|
|
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taxa = new ArrayList<>(); |
| 269 | 268 |
|
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for(TaxonName name : page.getRecords()){
|
| ... | ... | |
| 273 | 272 |
if(illegitimType == null){
|
| 274 | 273 |
Taxon taxon; |
| 275 | 274 |
try {
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logger.debug("Processing name: " + name.getTitleCache() + " [" + name.getRank().getLabel() + "]");
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LogUtils.logAsDebug(logger, "Processing name: " + name.getTitleCache() + " [" + name.getRank().getLabel() + "]");
|
|
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taxon = processor.assureSingleTaxon(name); |
| 278 | 277 |
processor.updateEdges(taxon); |
| 279 | 278 |
taxa.add(taxon); |
| ... | ... | |
| 281 | 280 |
logger.error(e.getMessage()); |
| 282 | 281 |
} |
| 283 | 282 |
} else {
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logger.debug("Skipping illegitimate name: " + name.getTitleCache() + " " + illegitimType.getLabel() + " [" + name.getRank().getLabel() + "]");
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LogUtils.logAsDebug(logger, "Skipping illegitimate name: " + name.getTitleCache() + " " + illegitimType.getLabel() + " [" + name.getRank().getLabel() + "]");
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|
| 285 | 284 |
} |
| 286 | 285 |
} else {
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logger.debug("Skipping name: " + name.getTitleCache() + " [" + (name.getRank() != null ? name.getRank().getLabel() : "NULL") + "]");
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LogUtils.logAsDebug(logger, "Skipping name: " + name.getTitleCache() + " [" + (name.getRank() != null ? name.getRank().getLabel() : "NULL") + "]");
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|
| 288 | 287 |
} |
| 289 | 288 |
} |
| 290 | 289 |
repo.getTaxonService().saveOrUpdate(taxa); |
| src/main/java/eu/etaxonomy/vaadin/mvp/AbstractPopupEditor.java | ||
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| 17 | 17 |
import java.util.Set; |
| 18 | 18 |
import java.util.Stack; |
| 19 | 19 |
|
| 20 |
import org.apache.logging.log4j.Level; |
|
| 21 | 20 |
import org.apache.logging.log4j.LogManager; |
| 22 | 21 |
import org.apache.logging.log4j.Logger; |
| 23 | 22 |
import org.vaadin.spring.events.EventScope; |
| ... | ... | |
| 429 | 428 |
viewEventBus.publish(EventScope.UI, this, new DoneWithPopupEvent(this, Reason.CANCEL)); |
| 430 | 429 |
} |
| 431 | 430 |
|
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/** |
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* @return |
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*/ |
|
| 435 | 431 |
private void delete() {
|
| 436 | 432 |
viewEventBus.publish(this, new EditorDeleteEvent<DTO>(this, fieldGroup.getItemDataSource().getBean())); |
| 437 | 433 |
viewEventBus.publish(EventScope.UI, this, new DoneWithPopupEvent(this, Reason.DELETE)); |
| ... | ... | |
| 478 | 474 |
} |
| 479 | 475 |
} |
| 480 | 476 |
|
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/** |
|
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* @param invalidFields |
|
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*/ |
|
| 484 | 477 |
private void updateFieldNotifications(Map<Field<?>, InvalidValueException> invalidFields) {
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| 485 | 478 |
for(Field<?> f : invalidFields.keySet()){
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| 486 | 479 |
if(f instanceof AbstractField){
|
| 487 | 480 |
String message = invalidFields.get(f).getHtmlMessage(); |
| 488 |
((AbstractField)f).setComponentError(new UserError(message, ContentMode.HTML, ErrorLevel.ERROR)); |
|
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((AbstractField<?>)f).setComponentError(new UserError(message, ContentMode.HTML, ErrorLevel.ERROR));
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|
| 489 | 482 |
} |
| 490 | 483 |
} |
| 491 |
|
|
| 492 | 484 |
} |
| 493 | 485 |
|
| 494 | 486 |
// ------------------------ field adding methods ------------------------ // |
| ... | ... | |
| 613 | 605 |
if(propertyId == null){
|
| 614 | 606 |
// not found in the editor field group. Maybe the field is bound to a nested fieldgroup? |
| 615 | 607 |
// 1. find the NestedFieldGroup implementations from the field up to the editor |
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LogUtils.setLevel(logger, Level.DEBUG); |
|
| 617 | 608 |
PropertyIdPath nestedPropertyIds = new PropertyIdPath(); |
| 618 |
Field parentField = field; |
|
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Field<?> parentField = field;
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HasComponents parentComponent = parentField.getParent(); |
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logger.debug("field: " + parentField.getClass().getSimpleName());
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LogUtils.logAsDebug(logger, "field: " + parentField.getClass().getSimpleName());
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| 621 | 612 |
while(parentComponent != null){
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logger.debug("parentComponent: " + parentComponent.getClass().getSimpleName());
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LogUtils.logAsDebug(logger, "parentComponent: " + parentComponent.getClass().getSimpleName());
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| 623 | 614 |
if(NestedFieldGroup.class.isAssignableFrom(parentComponent.getClass()) && AbstractField.class.isAssignableFrom(parentComponent.getClass())){
|
| 624 | 615 |
Optional<FieldGroup> parentFieldGroup = ((NestedFieldGroup)parentComponent).getFieldGroup(); |
| 625 | 616 |
if(parentFieldGroup.isPresent()){
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| 626 | 617 |
Object propId = parentFieldGroup.get().getPropertyId(parentField); |
| 627 | 618 |
if(propId != null){
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logger.debug("propId: " + propId.toString());
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LogUtils.logAsDebug(logger, "propId: " + propId.toString());
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| 629 | 620 |
nestedPropertyIds.addParent(propId); |
| 630 | 621 |
} |
| 631 |
logger.debug("parentField: " + parentField.getClass().getSimpleName());
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parentField = (Field)parentComponent; |
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LogUtils.logAsDebug(logger, "parentField: " + parentField.getClass().getSimpleName());
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parentField = (Field<?>)parentComponent;
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| 633 | 624 |
} else {
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logger.debug("parentFieldGroup is null, continuing ...");
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LogUtils.logAsDebug(logger, "parentFieldGroup is null, continuing ...");
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| 635 | 626 |
} |
| 636 | 627 |
} else if(parentComponent == this) {
|
| 637 | 628 |
// we reached the editor itself |
| 638 | 629 |
Object propId = fieldGroup.getPropertyId(parentField); |
| 639 | 630 |
if(propId != null){
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logger.debug("propId: " + propId.toString());
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LogUtils.logAsDebug(logger, "propId: " + propId.toString());
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| 641 | 632 |
nestedPropertyIds.addParent(propId); |
| 642 | 633 |
} |
| 643 | 634 |
propertyIdPath = nestedPropertyIds; |
Also available in: Unified diff
ref #10072 some adaptations for setLevel in vaadin