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/**
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* Copyright (C) 2017 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.vaadin.view.name;
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import java.util.Collection;
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import java.util.EnumSet;
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import java.util.HashMap;
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import java.util.List;
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import java.util.Map;
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import java.util.UUID;
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import org.apache.commons.lang3.BooleanUtils;
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import org.springframework.context.annotation.Scope;
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import org.springframework.security.core.GrantedAuthority;
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import com.vaadin.data.Property;
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import com.vaadin.data.Property.ValueChangeListener;
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import com.vaadin.spring.annotation.SpringComponent;
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import com.vaadin.ui.AbstractField;
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import com.vaadin.ui.Alignment;
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import com.vaadin.ui.CheckBox;
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import com.vaadin.ui.GridLayout;
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import com.vaadin.ui.ListSelect;
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import com.vaadin.ui.TextField;
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import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
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import eu.etaxonomy.cdm.model.common.AnnotationType;
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import eu.etaxonomy.cdm.model.common.CdmBase;
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import eu.etaxonomy.cdm.model.common.RelationshipBase.Direction;
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import eu.etaxonomy.cdm.model.name.NameRelationshipType;
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import eu.etaxonomy.cdm.model.name.Rank;
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import eu.etaxonomy.cdm.model.name.TaxonName;
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import eu.etaxonomy.cdm.model.reference.Reference;
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import eu.etaxonomy.cdm.vaadin.component.TextFieldNFix;
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import eu.etaxonomy.cdm.vaadin.component.common.FilterableAnnotationsField;
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import eu.etaxonomy.cdm.vaadin.component.common.TeamOrPersonField;
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import eu.etaxonomy.cdm.vaadin.event.ReferenceEditorAction;
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import eu.etaxonomy.cdm.vaadin.event.TaxonNameEditorAction;
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import eu.etaxonomy.cdm.vaadin.event.TaxonNameEditorActionStrRep;
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import eu.etaxonomy.cdm.vaadin.model.name.NameRelationshipDTO;
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import eu.etaxonomy.cdm.vaadin.model.name.TaxonNameDTO;
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import eu.etaxonomy.cdm.vaadin.permission.AccessRestrictedView;
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import eu.etaxonomy.cdm.vaadin.permission.CdmEditDeletePermissionTester;
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import eu.etaxonomy.cdm.vaadin.ui.RegistrationUIDefaults;
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import eu.etaxonomy.cdm.vaadin.util.TeamOrPersonBaseCaptionGenerator;
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import eu.etaxonomy.cdm.vaadin.util.converter.SetToListConverter;
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import eu.etaxonomy.vaadin.component.NameRelationField;
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import eu.etaxonomy.vaadin.component.ReloadableLazyComboBox;
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import eu.etaxonomy.vaadin.component.SwitchableTextField;
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import eu.etaxonomy.vaadin.component.ToManyRelatedEntitiesComboboxSelect;
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import eu.etaxonomy.vaadin.component.ToOneRelatedEntityCombobox;
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import eu.etaxonomy.vaadin.component.WeaklyRelatedEntityCombobox;
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import eu.etaxonomy.vaadin.event.EditorActionType;
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import eu.etaxonomy.vaadin.mvp.AbstractCdmDTOPopupEditor;
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/**
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* @author a.kohlbecker
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* @since May 22, 2017
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*
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*/
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@SpringComponent
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@Scope("prototype")
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public class TaxonNamePopupEditor extends AbstractCdmDTOPopupEditor<TaxonNameDTO, TaxonName, TaxonNameEditorPresenter>
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implements TaxonNamePopupEditorView, AccessRestrictedView{
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private static final long serialVersionUID = -7037436241474466359L;
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private final static int GRID_COLS = 4;
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private final static int GRID_ROWS = 19;
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private static final boolean HAS_BASIONYM_DEFAULT = false;
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private AbstractField<String> genusOrUninomialField;
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private AbstractField<String> infraGenericEpithetField;
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private AbstractField<String> specificEpithetField;
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private AbstractField<String> infraSpecificEpithetField;
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private SwitchableTextField fullTitleCacheFiled;
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private SwitchableTextField protectedNameCacheField;
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private ToOneRelatedEntityCombobox<Reference> nomReferenceCombobox;
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private TextField nomenclaturalReferenceDetail;
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private TeamOrPersonField exBasionymAuthorshipField;
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private TeamOrPersonField basionymAuthorshipField;
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private ToManyRelatedEntitiesComboboxSelect<TaxonName> basionymsComboboxSelect;
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private ToManyRelatedEntitiesComboboxSelect<TaxonName> replacedSynonymsComboboxSelect;
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private NameRelationField validationField;
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private NameRelationField orthographicVariantField;
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private CheckBox basionymToggle;
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private CheckBox replacedSynonymsToggle;
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private CheckBox validationToggle;
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private CheckBox orthographicVariantToggle;
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private ListSelect rankSelect;
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private TeamOrPersonField combinationAuthorshipField;
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private TeamOrPersonField exCombinationAuthorshipField;
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private EnumSet<TaxonNamePopupEditorMode> modesActive = EnumSet.noneOf(TaxonNamePopupEditorMode.class);
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private Boolean isInferredCombinationAuthorship = null;
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private Boolean isInferredBasionymAuthorship = null;
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private Boolean isInferredExBasionymAuthorship = null;
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private Map<AbstractField, Property.ValueChangeListener> authorshipUpdateListeners = new HashMap<>();
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private Boolean isInferredExCombinationAuthorship;
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private int specificEpithetFieldRow;
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private ValueChangeListener updateFieldVisibilityListener = e -> updateFieldVisibility();
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private FilterableAnnotationsField annotationsListField;
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private AnnotationType[] editableAnotationTypes = RegistrationUIDefaults.EDITABLE_ANOTATION_TYPES;
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private int genusOrUninomialRow;
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/**
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* By default AnnotationType.EDITORIAL() is enabled.
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*
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* @return the editableAnotationTypes
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*/
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@Override
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public AnnotationType[] getEditableAnotationTypes() {
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return editableAnotationTypes;
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}
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/**
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* By default AnnotationType.EDITORIAL() is enabled.
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*
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*
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* @param editableAnotationTypes the editableAnotationTypes to set
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*/
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@Override
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public void setEditableAnotationTypes(AnnotationType ... editableAnotationTypes) {
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this.editableAnotationTypes = editableAnotationTypes;
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}
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/**
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* @param layout
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* @param dtoType
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*/
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public TaxonNamePopupEditor() {
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super(new GridLayout(GRID_COLS, GRID_ROWS), TaxonNameDTO.class);
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}
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/**
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* {@inheritDoc}
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*/
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@Override
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public String getWindowCaption() {
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return "Name editor";
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}
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/**
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* {@inheritDoc}
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*/
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@Override
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public int getWindowWidth() {
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return 800;
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}
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/**
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* {@inheritDoc}
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*/
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@Override
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public void focusFirst() {
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// titleField.focus();
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}
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/**
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* {@inheritDoc}
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*/
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@Override
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protected String getDefaultComponentStyles() {
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return "tiny";
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}
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/**
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* {@inheritDoc}
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*/
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@Override
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protected void initContent() {
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GridLayout grid = (GridLayout)getFieldLayout();
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grid.setSizeFull();
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grid.setHideEmptyRowsAndColumns(true);
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grid.setSpacing(true);
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grid.setColumnExpandRatio(0, 0.3f);
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grid.setColumnExpandRatio(1, 0.3f);
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grid.setColumnExpandRatio(2, 0.3f);
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grid.setColumnExpandRatio(3, 0.0f);
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/*
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- nameType: preset, needs to be set in the presenter for new names
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- appendedPhrase: -> TODO field
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- nomenclaturalMicroReference: -> TODO field
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- nomenclaturalReference -> field but disabled for REGISTRY
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- rank -> SelectField which determines the visiblity of the other fields
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- fullTitleCache + protectedFullTitleCache -> SwitchableTextField : ADVANCED_MODE
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- nameCache + protectedNameCache -> SwitchableTextField : ADVANCED_MODE
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- homotypicalGroup -> hidden
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- typeDesignations -> hidden
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- descriptions -> hidden
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- taxonBases -> hidden
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- registrations -> hidden
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- relationsFromThisName-> TODO implement later
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- relationsToThisName -> TODO implement later
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- genusOrUninomial -> textField
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- infraGenericEpithet -> textField
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- specificEpithet -> textField
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- infraSpecificEpithet -> textField
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- authorshipCache + protectedAuthorshipCache -> SwitchableTextField : only ADVANCED_MODE and disabled for REGISTRY
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- basionymAuthorship -> field but disabled for REGISTRY, basionym is set as nameRelationShip
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- combinationAuthorship -> field but disabled for REGISTRY author team of the reference
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- exCombinationAuthorship -> textField
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- exBasionymAuthorship -> textField
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- status -> TODO field
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- monomHybrid -> TODO implement hybrids later
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- binomHybrid -> TODO implement hybrids later
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- trinomHybrid -> TODO implement hybrids later
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- hybridParentRelations -> TODO implement hybrids later
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- hybridChildRelations -> TODO implement hybrids later
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- hybridFormula -> TODO implement hybrids later
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** ViralName attributes **
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- acronym
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** BacterialName attributes **
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- subGenusAuthorship
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- nameApprobation
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- breed
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- publicationYear
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- originalPublicationYear
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- cultivarName
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*/
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int row = 0;
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rankSelect = new ListSelect("Rank");
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rankSelect.setNullSelectionAllowed(false);
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rankSelect.setRows(1);
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rankSelect.setWidth(100, Unit.PERCENTAGE);
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addField(rankSelect, "rank", 0, row, 1, row);
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grid.setComponentAlignment(rankSelect, Alignment.TOP_RIGHT);
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row++;
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basionymToggle = new CheckBox("With basionym");
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basionymToggle.setValue(HAS_BASIONYM_DEFAULT);
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basionymToggle.setStyleName(getDefaultComponentStyles());
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grid.addComponent(basionymToggle, 0, row);
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grid.setComponentAlignment(basionymToggle, Alignment.BOTTOM_LEFT);
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replacedSynonymsToggle = new CheckBox("With replaced synonym");
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grid.addComponent(replacedSynonymsToggle, 1, row);
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grid.setComponentAlignment(replacedSynonymsToggle, Alignment.BOTTOM_LEFT);
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validationToggle = new CheckBox("Validation");
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grid.addComponent(validationToggle, 2, row);
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grid.setComponentAlignment(validationToggle, Alignment.BOTTOM_LEFT);
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orthographicVariantToggle = new CheckBox("Orthographic variant");
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grid.addComponent(orthographicVariantToggle, 3, row);
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grid.setComponentAlignment(orthographicVariantToggle, Alignment.BOTTOM_LEFT);
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row++;
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// fullTitleCache
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fullTitleCacheFiled = addSwitchableTextField("Full title cache", "fullTitleCache", "protectedFullTitleCache", 0, row, GRID_COLS-1, row);
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fullTitleCacheFiled.setWidth(100, Unit.PERCENTAGE);
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row++;
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protectedNameCacheField = addSwitchableTextField("Name cache", "nameCache", "protectedNameCache", 0, row, GRID_COLS-1, row);
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protectedNameCacheField.setWidth(100, Unit.PERCENTAGE);
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row++;
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genusOrUninomialRow = row;
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genusOrUninomialField = addTextField("Genus or uninomial", "genusOrUninomial", 0, row, 1, row);
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genusOrUninomialField.setWidth(200, Unit.PIXELS);
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infraGenericEpithetField = addTextField("Infrageneric epithet", "infraGenericEpithet", 2, row, 3, row);
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infraGenericEpithetField.setWidth(200, Unit.PIXELS);
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row++;
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specificEpithetFieldRow = row;
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specificEpithetField = addTextField("Specific epithet", "specificEpithet", 0, row, 1, row);
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specificEpithetField.setWidth(200, Unit.PIXELS);
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infraSpecificEpithetField = addTextField("Infraspecific epithet", "infraSpecificEpithet", 2, row, 3, row);
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infraSpecificEpithetField.setWidth(200, Unit.PIXELS);
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row++;
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combinationAuthorshipField = new TeamOrPersonField("Combination author(s)", TeamOrPersonBaseCaptionGenerator.CacheType.NOMENCLATURAL_TITLE);
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combinationAuthorshipField.setWidth(100, Unit.PERCENTAGE);
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addField(combinationAuthorshipField, "combinationAuthorship", 0, row, GRID_COLS-1, row);
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row++;
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nomReferenceCombobox = new ToOneRelatedEntityCombobox<Reference>("Nomenclatural reference", Reference.class);
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// nomReferenceCombobox.setImmediate(true);
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nomReferenceCombobox.addClickListenerAddEntity(e -> getViewEventBus().publish(
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this,
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new ReferenceEditorAction(EditorActionType.ADD, null, nomReferenceCombobox, this)
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));
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nomReferenceCombobox.addClickListenerEditEntity(e -> {
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if(nomReferenceCombobox.getValue() != null){
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getViewEventBus().publish(this,
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new ReferenceEditorAction(
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EditorActionType.EDIT,
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nomReferenceCombobox.getValue().getUuid(),
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e.getButton(),
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nomReferenceCombobox,
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this)
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);
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}
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});
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// nomReferenceCombobox.getSelect().addValueChangeListener(e -> logger.debug("nomReferenceCombobox value changed #1"));
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// nomReferenceCombobox.setWidth(300, Unit.PIXELS);
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nomReferenceCombobox.setWidth("100%");
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addField(nomReferenceCombobox, "nomenclaturalReference", 0, row, 3, row);
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row++;
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nomenclaturalReferenceDetail = addTextField("Reference detail", "nomenclaturalMicroReference", 0, row, 2, row);
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nomenclaturalReferenceDetail.setWidth(100, Unit.PERCENTAGE);
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// --------------- Basionyms
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row++;
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basionymsComboboxSelect = new ToManyRelatedEntitiesComboboxSelect<TaxonName>(TaxonName.class, "Basionym");
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basionymsComboboxSelect.setConverter(new SetToListConverter<TaxonName>());
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addField(basionymsComboboxSelect, "basionyms", 0, row, 3, row);
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basionymsComboboxSelect.setWidth(100, Unit.PERCENTAGE);
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basionymsComboboxSelect.withEditButton(true);
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basionymsComboboxSelect.setEditPermissionTester(new CdmEditDeletePermissionTester());
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basionymsComboboxSelect.setEditActionListener(e -> {
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Object fieldValue = e.getSource().getValue();
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UUID beanUuid = null;
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if(fieldValue != null){
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beanUuid = ((CdmBase)fieldValue).getUuid();
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}
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ReloadableLazyComboBox<TaxonName> lazyCombobox = (ReloadableLazyComboBox<TaxonName>) e.getSource();
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getViewEventBus().publish(this, new TaxonNameEditorAction(e.getAction(), beanUuid, null, lazyCombobox, this));
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});
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grid.setComponentAlignment(basionymsComboboxSelect, Alignment.TOP_RIGHT);
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row++;
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basionymAuthorshipField = new TeamOrPersonField("Basionym author(s)", TeamOrPersonBaseCaptionGenerator.CacheType.NOMENCLATURAL_TITLE);
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basionymAuthorshipField.setWidth(100, Unit.PERCENTAGE);
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addField(basionymAuthorshipField, "basionymAuthorship", 0, row, GRID_COLS-1, row);
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row++;
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exBasionymAuthorshipField = new TeamOrPersonField("Ex-basionym author(s)", TeamOrPersonBaseCaptionGenerator.CacheType.NOMENCLATURAL_TITLE);
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exBasionymAuthorshipField.setWidth(100, Unit.PERCENTAGE);
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addField(exBasionymAuthorshipField, "exBasionymAuthorship", 0, row, GRID_COLS-1, row);
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// --------------- ReplacedSynonyms
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row++;
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replacedSynonymsComboboxSelect = new ToManyRelatedEntitiesComboboxSelect<TaxonName>(TaxonName.class, "Replaced synonyms");
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replacedSynonymsComboboxSelect.setConverter(new SetToListConverter<TaxonName>());
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addField(replacedSynonymsComboboxSelect, "replacedSynonyms", 0, row, 3, row);
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replacedSynonymsComboboxSelect.setWidth(100, Unit.PERCENTAGE);
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replacedSynonymsComboboxSelect.withEditButton(true);
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replacedSynonymsComboboxSelect.setEditPermissionTester(new CdmEditDeletePermissionTester());
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replacedSynonymsComboboxSelect.setEditActionListener(e -> {
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Object fieldValue = e.getSource().getValue();
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UUID beanUuid = null;
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if(fieldValue != null){
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beanUuid = ((CdmBase)fieldValue).getUuid();
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}
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ReloadableLazyComboBox<TaxonName> lazyCombobox = (ReloadableLazyComboBox<TaxonName>) e.getSource();
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403
|
getViewEventBus().publish(this, new TaxonNameEditorAction(e.getAction(), beanUuid, null, lazyCombobox, this));
|
404
|
});
|
405
|
grid.setComponentAlignment(replacedSynonymsComboboxSelect, Alignment.TOP_RIGHT);
|
406
|
|
407
|
// --------------- Validation
|
408
|
row++;
|
409
|
validationField = new NameRelationField("Validation", "Validated name", Direction.relatedTo, NameRelationshipType.VALIDATED_BY_NAME());
|
410
|
validationField.setWidth(100, Unit.PERCENTAGE);
|
411
|
ToOneRelatedEntityCombobox<TaxonName> validatedNameComboBox = validationField.getRelatedNameComboBox();
|
412
|
validatedNameComboBox.addClickListenerAddEntity(e -> getViewEventBus().publish(
|
413
|
this,
|
414
|
new TaxonNameEditorAction(EditorActionType.ADD, null, validatedNameComboBox, this)
|
415
|
));
|
416
|
validatedNameComboBox.addClickListenerEditEntity(e -> {
|
417
|
if(validatedNameComboBox.getValue() != null){
|
418
|
getViewEventBus().publish(this,
|
419
|
new TaxonNameEditorAction(
|
420
|
EditorActionType.EDIT,
|
421
|
validatedNameComboBox.getValue().getUuid(),
|
422
|
e.getButton(),
|
423
|
validatedNameComboBox,
|
424
|
this)
|
425
|
);
|
426
|
}
|
427
|
});
|
428
|
ToOneRelatedEntityCombobox<Reference> validationCitatonComboBox = validationField.getCitatonComboBox();
|
429
|
validationCitatonComboBox.addClickListenerAddEntity(e -> getViewEventBus().publish(
|
430
|
// NOTE: adding new references is currently not allowed for name relations, see NameRelationField!!
|
431
|
this,
|
432
|
new ReferenceEditorAction(EditorActionType.ADD, null, validationCitatonComboBox, this)
|
433
|
));
|
434
|
validationCitatonComboBox.addClickListenerEditEntity(e -> {
|
435
|
if(validationCitatonComboBox.getValue() != null){
|
436
|
getViewEventBus().publish(this,
|
437
|
new ReferenceEditorAction(
|
438
|
EditorActionType.EDIT,
|
439
|
validationCitatonComboBox.getValue().getUuid(),
|
440
|
e.getButton(),
|
441
|
validationCitatonComboBox,
|
442
|
this)
|
443
|
);
|
444
|
}
|
445
|
});
|
446
|
addField(validationField, "validationFor", 0, row, 3, row);
|
447
|
grid.setComponentAlignment(validationField, Alignment.TOP_RIGHT);
|
448
|
|
449
|
// ------- Orthographic Variant (Correction)
|
450
|
row++;
|
451
|
orthographicVariantField = new NameRelationField("Orthographic variant", "Name variant", Direction.relatedTo, NameRelationshipType.ORTHOGRAPHIC_VARIANT());
|
452
|
orthographicVariantField.setWidth(100, Unit.PERCENTAGE);
|
453
|
// corrected name must have same
|
454
|
ToOneRelatedEntityCombobox<TaxonName> orthographicVariantCombobox = orthographicVariantField.getRelatedNameComboBox();
|
455
|
orthographicVariantCombobox.addClickListenerAddEntity(e -> getViewEventBus().publish(
|
456
|
this,
|
457
|
new TaxonNameEditorAction(EditorActionType.ADD, null, orthographicVariantCombobox, this)
|
458
|
));
|
459
|
orthographicVariantCombobox.addClickListenerEditEntity(e -> {
|
460
|
if(orthographicVariantCombobox.getValue() != null){
|
461
|
getViewEventBus().publish(this,
|
462
|
new TaxonNameEditorAction(
|
463
|
EditorActionType.EDIT,
|
464
|
orthographicVariantCombobox.getValue().getUuid(),
|
465
|
e.getButton(),
|
466
|
orthographicVariantCombobox,
|
467
|
this)
|
468
|
);
|
469
|
}
|
470
|
});
|
471
|
ToOneRelatedEntityCombobox<Reference> orthographicCorrectionCitatonComboBox = orthographicVariantField.getCitatonComboBox();
|
472
|
orthographicCorrectionCitatonComboBox.addClickListenerAddEntity(e -> getViewEventBus().publish(
|
473
|
// NOTE: adding new references is currently not allowed for name relations, see NameRelationField!!
|
474
|
this,
|
475
|
new ReferenceEditorAction(EditorActionType.ADD, null, orthographicCorrectionCitatonComboBox, this)
|
476
|
));
|
477
|
orthographicCorrectionCitatonComboBox.addClickListenerEditEntity(e -> {
|
478
|
if(orthographicCorrectionCitatonComboBox.getValue() != null){
|
479
|
getViewEventBus().publish(this,
|
480
|
new ReferenceEditorAction(
|
481
|
EditorActionType.EDIT,
|
482
|
orthographicCorrectionCitatonComboBox.getValue().getUuid(),
|
483
|
e.getButton(),
|
484
|
orthographicCorrectionCitatonComboBox,
|
485
|
this)
|
486
|
);
|
487
|
}
|
488
|
});
|
489
|
addField(orthographicVariantField, "orthographicVariant", 0, row, 3, row);
|
490
|
grid.setComponentAlignment(orthographicVariantField, Alignment.TOP_RIGHT);
|
491
|
|
492
|
row++;
|
493
|
exCombinationAuthorshipField = new TeamOrPersonField("Ex-combination author(s)", TeamOrPersonBaseCaptionGenerator.CacheType.NOMENCLATURAL_TITLE);
|
494
|
exCombinationAuthorshipField.setWidth(100, Unit.PERCENTAGE);
|
495
|
addField(exCombinationAuthorshipField, "exCombinationAuthorship", 0, row, GRID_COLS-1, row);
|
496
|
|
497
|
row++;
|
498
|
annotationsListField = new FilterableAnnotationsField("Editorial notes");
|
499
|
annotationsListField.setWidth(100, Unit.PERCENTAGE);
|
500
|
annotationsListField.setAnnotationTypesVisible(editableAnotationTypes);
|
501
|
addField(annotationsListField, "annotations", 0, row, GRID_COLS-1, row);
|
502
|
|
503
|
// -----------------------------------------------------------------------------
|
504
|
|
505
|
setAdvancedModeEnabled(true);
|
506
|
registerAdvancedModeComponents(fullTitleCacheFiled, protectedNameCacheField);
|
507
|
|
508
|
registerAdvancedModeComponents(combinationAuthorshipField);
|
509
|
registerAdvancedModeComponents(basionymAuthorshipField);
|
510
|
registerAdvancedModeComponents(exBasionymAuthorshipField);
|
511
|
registerAdvancedModeComponents(exCombinationAuthorshipField);
|
512
|
|
513
|
registerAdvancedModeComponents(combinationAuthorshipField.getCachFields());
|
514
|
registerAdvancedModeComponents(exCombinationAuthorshipField.getCachFields());
|
515
|
registerAdvancedModeComponents(basionymAuthorshipField.getCachFields());
|
516
|
registerAdvancedModeComponents(exBasionymAuthorshipField.getCachFields());
|
517
|
|
518
|
setAdvancedMode(false);
|
519
|
|
520
|
//TODO remove below line once #7858 is fixed
|
521
|
withDeleteButton(false);
|
522
|
|
523
|
}
|
524
|
|
525
|
protected TeamOrPersonBase inferBasiomynAuthors() {
|
526
|
List<TaxonName> basionyms = basionymsComboboxSelect.getValue();
|
527
|
if(!basionyms.isEmpty() && basionyms.get(0) != null){
|
528
|
TaxonName basionym = basionyms.get(0);
|
529
|
if(basionym.getCombinationAuthorship() != null){
|
530
|
return basionym.getCombinationAuthorship();
|
531
|
} else if(basionym.getNomenclaturalReference() != null){
|
532
|
return basionym.getNomenclaturalReference().getAuthorship();
|
533
|
}
|
534
|
}
|
535
|
return null;
|
536
|
}
|
537
|
|
538
|
protected TeamOrPersonBase inferExBasiomynAuthors() {
|
539
|
List<TaxonName> basionyms = basionymsComboboxSelect.getValue();
|
540
|
if(!basionyms.isEmpty() && basionyms.get(0) != null){
|
541
|
TaxonName basionym = basionyms.get(0);
|
542
|
return basionym.getExCombinationAuthorship();
|
543
|
}
|
544
|
return null;
|
545
|
}
|
546
|
|
547
|
protected TeamOrPersonBase inferCombinationAuthors() {
|
548
|
Reference nomRef = nomReferenceCombobox.getValue();
|
549
|
if(nomRef != null) {
|
550
|
return nomRef.getAuthorship();
|
551
|
}
|
552
|
return null;
|
553
|
}
|
554
|
|
555
|
protected TeamOrPersonBase inferExCombinationAuthors() {
|
556
|
NameRelationshipDTO nameRelationDTO = validationField.getValue();
|
557
|
if(nameRelationDTO != null && nameRelationDTO.getOtherName() != null){
|
558
|
TaxonName validatedName = nameRelationDTO.getOtherName();
|
559
|
if(validatedName.getCombinationAuthorship() != null) {
|
560
|
return validatedName.getCombinationAuthorship();
|
561
|
} else if(validatedName.getNomenclaturalReference() != null){
|
562
|
return validatedName.getNomenclaturalReference().getAuthorship();
|
563
|
}
|
564
|
}
|
565
|
return null;
|
566
|
}
|
567
|
|
568
|
@Override
|
569
|
protected void afterItemDataSourceSet() {
|
570
|
|
571
|
|
572
|
rankSelect.addValueChangeListener(updateFieldVisibilityListener);
|
573
|
basionymToggle.addValueChangeListener(e -> {
|
574
|
updateAuthorshipFields();
|
575
|
});
|
576
|
validationToggle.addValueChangeListener(e -> {
|
577
|
updateAuthorshipFields();
|
578
|
});
|
579
|
replacedSynonymsToggle.addValueChangeListener(e -> {
|
580
|
boolean enable = e.getProperty().getValue() != null && (Boolean)e.getProperty().getValue();
|
581
|
replacedSynonymsComboboxSelect.setVisible(enable);
|
582
|
});
|
583
|
orthographicVariantToggle.addValueChangeListener(e -> {
|
584
|
boolean enable = e.getProperty().getValue() != null && (Boolean)e.getProperty().getValue();
|
585
|
orthographicVariantField.setVisible(enable);
|
586
|
});
|
587
|
|
588
|
TaxonNameDTO taxonNameDTO = getBean();
|
589
|
boolean showBasionymSection = taxonNameDTO.getBasionyms().size() > 0
|
590
|
|| taxonNameDTO.getBasionymAuthorship() != null
|
591
|
|| taxonNameDTO.getExBasionymAuthorship() != null;
|
592
|
basionymToggle.setValue(showBasionymSection);
|
593
|
basionymToggle.setReadOnly(showBasionymSection);
|
594
|
|
595
|
boolean showReplacedSynonyms = taxonNameDTO.getReplacedSynonyms().size() > 0;
|
596
|
replacedSynonymsToggle.setValue(showReplacedSynonyms);
|
597
|
replacedSynonymsToggle.setReadOnly(showReplacedSynonyms);
|
598
|
replacedSynonymsComboboxSelect.setVisible(showReplacedSynonyms);
|
599
|
|
600
|
boolean showValidationSection = taxonNameDTO.getValidationFor() != null || taxonNameDTO.getExCombinationAuthorship() != null;
|
601
|
validationToggle.setValue(showValidationSection);
|
602
|
validationToggle.setReadOnly(showValidationSection);
|
603
|
|
604
|
boolean showOrthographicCorrectionSection = taxonNameDTO.getOrthographicVariant() != null;
|
605
|
orthographicVariantToggle.setValue(showOrthographicCorrectionSection);
|
606
|
orthographicVariantToggle.setReadOnly(showOrthographicCorrectionSection);
|
607
|
|
608
|
if(isModeEnabled(TaxonNamePopupEditorMode.AUTOFILL_AUTHORSHIP_DATA)){
|
609
|
updateAuthorshipFields();
|
610
|
}
|
611
|
if(isModeEnabled(TaxonNamePopupEditorMode.NOMENCLATURALREFERENCE_SECTION_EDITING_ONLY) && getBean().getNomenclaturalReference() != null) {
|
612
|
nomReferenceCombobox.setDescription("Selection limited to nomenclatural reference and parts of it.");
|
613
|
}
|
614
|
if(isModeEnabled(TaxonNamePopupEditorMode.REQUIRE_NOMENCLATURALREFERENCE)) {
|
615
|
if(combinationAuthorshipField.getValue() == null){
|
616
|
nomReferenceCombobox.setRequired(true);
|
617
|
nomReferenceCombobox.setImmediate(true);
|
618
|
} else {
|
619
|
combinationAuthorshipField.addValueChangeListener(e -> {
|
620
|
if(e.getProperty().getValue() == null){
|
621
|
nomReferenceCombobox.setRequired(true);
|
622
|
nomReferenceCombobox.setImmediate(true);
|
623
|
}
|
624
|
});
|
625
|
}
|
626
|
}
|
627
|
}
|
628
|
|
629
|
/**
|
630
|
* Updates all authorship fields if the an authorship field is empty this method attempts to infer the
|
631
|
* authors from the related nomenclatural reference or taxon name.
|
632
|
* <p>
|
633
|
* Finally the {@link #updateFieldVisibility()} is invoked.
|
634
|
*
|
635
|
* @param taxonName
|
636
|
*/
|
637
|
@Override
|
638
|
public void updateAuthorshipFields() {
|
639
|
|
640
|
TaxonNameDTO taxonName = getBean();
|
641
|
|
642
|
// ------------- CombinationAuthors
|
643
|
isInferredCombinationAuthorship = updateAuthorshipFieldData(
|
644
|
taxonName.getCombinationAuthorship(),
|
645
|
inferCombinationAuthors(),
|
646
|
combinationAuthorshipField,
|
647
|
nomReferenceCombobox.getSelect(),
|
648
|
isInferredCombinationAuthorship);
|
649
|
|
650
|
|
651
|
// ------------- Basionym and ExBasionymAuthors
|
652
|
if(BooleanUtils.isTrue(basionymToggle.getValue())){
|
653
|
|
654
|
isInferredBasionymAuthorship = updateAuthorshipFieldData(
|
655
|
taxonName.getBasionymAuthorship(),
|
656
|
inferBasiomynAuthors(),
|
657
|
basionymAuthorshipField,
|
658
|
basionymsComboboxSelect,
|
659
|
isInferredBasionymAuthorship
|
660
|
);
|
661
|
|
662
|
isInferredExBasionymAuthorship = updateAuthorshipFieldData(
|
663
|
taxonName.getExBasionymAuthorship(),
|
664
|
inferExBasiomynAuthors(),
|
665
|
exBasionymAuthorshipField,
|
666
|
basionymsComboboxSelect,
|
667
|
isInferredExBasionymAuthorship
|
668
|
);
|
669
|
|
670
|
}
|
671
|
|
672
|
// ------------- Validation and ExCombinationAuthors
|
673
|
isInferredExCombinationAuthorship = updateAuthorshipFieldData(
|
674
|
taxonName.getExCombinationAuthorship(),
|
675
|
inferExCombinationAuthors(),
|
676
|
exCombinationAuthorshipField,
|
677
|
validationField.getRelatedNameComboBox(),
|
678
|
isInferredExCombinationAuthorship
|
679
|
);
|
680
|
|
681
|
updateFieldVisibility();
|
682
|
}
|
683
|
|
684
|
|
685
|
/**
|
686
|
*
|
687
|
* @param authorship
|
688
|
* the value of the taxonName authorship field
|
689
|
* @param inferredAuthors
|
690
|
* the value inferred from other fields which may be set as authorship to the taxon name
|
691
|
* @param authorshipField
|
692
|
* the ui element to edit the taxonName authorship field
|
693
|
* @param updateTriggerField
|
694
|
* @param lastInferredAuthorshipState
|
695
|
* @return
|
696
|
*/
|
697
|
protected Boolean updateAuthorshipFieldData(TeamOrPersonBase<?> authorship, TeamOrPersonBase inferredAuthors,
|
698
|
TeamOrPersonField authorshipField, AbstractField updateTriggerField,
|
699
|
Boolean lastInferredAuthorshipState) {
|
700
|
|
701
|
if(authorship == null){
|
702
|
authorshipField.setValue(inferredAuthors);
|
703
|
lastInferredAuthorshipState = true;
|
704
|
} else {
|
705
|
boolean authorshipMatch = authorship == inferredAuthors;
|
706
|
if(lastInferredAuthorshipState == null){
|
707
|
// initialization of authorshipState, this comes only into account when the editor is just being initialized
|
708
|
lastInferredAuthorshipState = authorshipMatch;
|
709
|
}
|
710
|
if(!authorshipMatch && lastInferredAuthorshipState){
|
711
|
// update the combinationAuthorshipField to follow changes of the nomenclatural reference in case it was autofilled before
|
712
|
authorshipField.setValue(inferredAuthors);
|
713
|
lastInferredAuthorshipState = true;
|
714
|
}
|
715
|
}
|
716
|
|
717
|
if(updateTriggerField != null){
|
718
|
// IMPORTANT!
|
719
|
// this ChangeListener must be added at this very late point in the editor lifecycle so that it is called after
|
720
|
// the ToOneRelatedEntityReloader which may have been added to the updateTriggerField in the presenters handleViewEntered() method.
|
721
|
// Otherwise we risk multiple representation problems in the hibernate session
|
722
|
if(!authorshipUpdateListeners.containsKey(updateTriggerField)){
|
723
|
ValueChangeListener listener = e -> {
|
724
|
logger.debug(" value changed #2");
|
725
|
updateAuthorshipFields();
|
726
|
};
|
727
|
updateTriggerField.addValueChangeListener(listener);
|
728
|
authorshipUpdateListeners.put(updateTriggerField, listener);
|
729
|
}
|
730
|
}
|
731
|
|
732
|
return lastInferredAuthorshipState;
|
733
|
}
|
734
|
|
735
|
/**
|
736
|
* @param rank
|
737
|
* @return
|
738
|
*/
|
739
|
private void updateFieldVisibility() {
|
740
|
|
741
|
// TODO use getField() instead and remove field references
|
742
|
Rank rank = (Rank) rankSelect.getValue();
|
743
|
|
744
|
boolean isSpeciesOrBelow = !rank.isHigher(Rank.SPECIES());
|
745
|
Boolean withBasionymSection = BooleanUtils.isTrue(basionymToggle.getValue());
|
746
|
Boolean withValidationSection = BooleanUtils.isTrue(validationToggle.getValue());
|
747
|
Boolean withOrthographicCorrectionSection = BooleanUtils.isTrue(orthographicVariantToggle.getValue());
|
748
|
|
749
|
if(isModeEnabled(TaxonNamePopupEditorMode.VALIDATE_AGAINST_HIGHER_NAME_PART)){
|
750
|
if(isSpeciesOrBelow) {
|
751
|
if(TextField.class.isAssignableFrom(genusOrUninomialField.getClass())){
|
752
|
WeaklyRelatedEntityCombobox<TaxonName> combobox = new WeaklyRelatedEntityCombobox<TaxonName>("-> this caption will be replaced <-", TaxonName.class);
|
753
|
combobox.addClickListenerAddEntity(e -> getViewEventBus().publish(
|
754
|
this,
|
755
|
new TaxonNameEditorActionStrRep(
|
756
|
EditorActionType.ADD,
|
757
|
e.getButton(),
|
758
|
combobox,
|
759
|
this)
|
760
|
));
|
761
|
combobox.addClickListenerEditEntity(e -> {
|
762
|
if(combobox.getValue() != null){
|
763
|
getViewEventBus().publish(this,
|
764
|
new TaxonNameEditorActionStrRep(
|
765
|
EditorActionType.EDIT,
|
766
|
combobox.getIdForValue(),
|
767
|
e.getButton(),
|
768
|
combobox,
|
769
|
this)
|
770
|
);
|
771
|
}
|
772
|
});
|
773
|
genusOrUninomialField = replaceComponent("genusOrUninomial", genusOrUninomialField, combobox, 0, genusOrUninomialRow, 1, genusOrUninomialRow);
|
774
|
}
|
775
|
} else {
|
776
|
if(WeaklyRelatedEntityCombobox.class.isAssignableFrom(genusOrUninomialField.getClass())) {
|
777
|
genusOrUninomialField = replaceComponent("genusOrUninomial", genusOrUninomialField, new TextFieldNFix(), 0, genusOrUninomialRow, 1, genusOrUninomialRow);
|
778
|
}
|
779
|
}
|
780
|
}
|
781
|
|
782
|
if(isModeEnabled(TaxonNamePopupEditorMode.VALIDATE_AGAINST_HIGHER_NAME_PART)){
|
783
|
if(rank.isInfraSpecific()) {
|
784
|
if(TextField.class.isAssignableFrom(specificEpithetField.getClass())) {
|
785
|
WeaklyRelatedEntityCombobox<TaxonName> combobox = new WeaklyRelatedEntityCombobox<TaxonName>("-> this caption will be replaced <-", TaxonName.class);
|
786
|
specificEpithetField = replaceComponent("specificEpithet", specificEpithetField, combobox, 0, specificEpithetFieldRow, 1, specificEpithetFieldRow);
|
787
|
combobox.addClickListenerAddEntity(e -> getViewEventBus().publish(
|
788
|
this,
|
789
|
new TaxonNameEditorActionStrRep(EditorActionType.ADD, e.getButton(), combobox, this)
|
790
|
));
|
791
|
combobox.addClickListenerEditEntity(e -> {
|
792
|
if(combobox.getValue() != null){
|
793
|
getViewEventBus().publish(this,
|
794
|
new TaxonNameEditorActionStrRep(
|
795
|
EditorActionType.EDIT,
|
796
|
combobox.getIdForValue(),
|
797
|
e.getButton(),
|
798
|
combobox,
|
799
|
this)
|
800
|
);
|
801
|
}
|
802
|
});
|
803
|
}
|
804
|
} else {
|
805
|
if(WeaklyRelatedEntityCombobox.class.isAssignableFrom(specificEpithetField.getClass())) {
|
806
|
specificEpithetField = replaceComponent("specificEpithet", specificEpithetField, new TextFieldNFix(), 0, specificEpithetFieldRow, 1, specificEpithetFieldRow);
|
807
|
}
|
808
|
}
|
809
|
}
|
810
|
|
811
|
if(isModeEnabled(TaxonNamePopupEditorMode.ORTHOGRAPHIC_CORRECTION)){
|
812
|
orthographicVariantField.setCaption("Orthographic correction");
|
813
|
orthographicVariantField.getRelatedNameComboBox().setCaption("Corrected name");
|
814
|
orthographicVariantToggle.setCaption("Orthographic correction");
|
815
|
} else {
|
816
|
orthographicVariantField.setCaption("Orthographic variant");
|
817
|
orthographicVariantField.getRelatedNameComboBox().setCaption("Name variant");
|
818
|
orthographicVariantToggle.setCaption("Orthographic variant");
|
819
|
}
|
820
|
|
821
|
specificEpithetField.setVisible(isSpeciesOrBelow);
|
822
|
infraSpecificEpithetField.setVisible(rank.isInfraSpecific());
|
823
|
infraGenericEpithetField.setVisible(rank.isInfraGeneric());
|
824
|
|
825
|
basionymsComboboxSelect.setVisible(withBasionymSection);
|
826
|
|
827
|
combinationAuthorshipField.setVisible(isInferredCombinationAuthorship != null && !isInferredCombinationAuthorship);
|
828
|
basionymAuthorshipField.setVisible(withBasionymSection && isInferredBasionymAuthorship != null && !isInferredBasionymAuthorship);
|
829
|
exBasionymAuthorshipField.setVisible(withBasionymSection && isInferredExBasionymAuthorship != null && !isInferredExBasionymAuthorship);
|
830
|
|
831
|
validationField.setVisible(withValidationSection);
|
832
|
exCombinationAuthorshipField.setVisible(withValidationSection && isInferredExCombinationAuthorship != null && !isInferredExCombinationAuthorship);
|
833
|
|
834
|
orthographicVariantField.setVisible(withOrthographicCorrectionSection);
|
835
|
|
836
|
// if(taxonName != null){
|
837
|
// if(modesActive.contains(TaxonNamePopupEditorMode.AUTOFILL_AUTHORSHIP_DATA)){
|
838
|
// }
|
839
|
// }
|
840
|
|
841
|
infraSpecificEpithetField.setVisible(rank.isInfraSpecific());
|
842
|
specificEpithetField.setVisible(isSpeciesOrBelow);
|
843
|
infraGenericEpithetField.setVisible(rank.isInfraGenericButNotSpeciesGroup());
|
844
|
genusOrUninomialField.setCaption(isSpeciesOrBelow ? "Genus" : "Uninomial");
|
845
|
}
|
846
|
|
847
|
|
848
|
@Override
|
849
|
public void cancel() {
|
850
|
authorshipUpdateListeners.keySet().forEach(field -> field.removeValueChangeListener(authorshipUpdateListeners.get(field)));
|
851
|
rankSelect.removeValueChangeListener(updateFieldVisibilityListener);
|
852
|
super.cancel();
|
853
|
}
|
854
|
|
855
|
/**
|
856
|
* {@inheritDoc}
|
857
|
*/
|
858
|
@Override
|
859
|
public boolean allowAnonymousAccess() {
|
860
|
return false;
|
861
|
}
|
862
|
|
863
|
/**
|
864
|
* {@inheritDoc}
|
865
|
*/
|
866
|
@Override
|
867
|
public Collection<Collection<GrantedAuthority>> allowedGrantedAuthorities() {
|
868
|
return null;
|
869
|
}
|
870
|
|
871
|
/**
|
872
|
* {@inheritDoc}
|
873
|
*/
|
874
|
@Override
|
875
|
public ToOneRelatedEntityCombobox<Reference> getNomReferenceCombobox() {
|
876
|
return nomReferenceCombobox;
|
877
|
}
|
878
|
|
879
|
/**
|
880
|
* {@inheritDoc}
|
881
|
*/
|
882
|
@Override
|
883
|
public ToManyRelatedEntitiesComboboxSelect<TaxonName> getBasionymComboboxSelect() {
|
884
|
return basionymsComboboxSelect;
|
885
|
}
|
886
|
|
887
|
/**
|
888
|
* {@inheritDoc}
|
889
|
*/
|
890
|
@Override
|
891
|
public ToManyRelatedEntitiesComboboxSelect<TaxonName> getReplacedSynonymsComboboxSelect() {
|
892
|
return replacedSynonymsComboboxSelect;
|
893
|
}
|
894
|
|
895
|
/**
|
896
|
* {@inheritDoc}
|
897
|
*/
|
898
|
@Override
|
899
|
public ListSelect getRankSelect() {
|
900
|
return rankSelect;
|
901
|
}
|
902
|
|
903
|
/**
|
904
|
* {@inheritDoc}
|
905
|
*/
|
906
|
@Override
|
907
|
public AbstractField<String> getGenusOrUninomialField(){
|
908
|
return genusOrUninomialField;
|
909
|
}
|
910
|
|
911
|
/**
|
912
|
* @return the exBasionymAuthorshipField
|
913
|
*/
|
914
|
@Override
|
915
|
public TeamOrPersonField getExBasionymAuthorshipField() {
|
916
|
return exBasionymAuthorshipField;
|
917
|
}
|
918
|
|
919
|
/**
|
920
|
* @return the basionymAuthorshipField
|
921
|
*/
|
922
|
@Override
|
923
|
public TeamOrPersonField getBasionymAuthorshipField() {
|
924
|
return basionymAuthorshipField;
|
925
|
}
|
926
|
|
927
|
/**
|
928
|
* @return the combinationAuthorshipField
|
929
|
*/
|
930
|
@Override
|
931
|
public TeamOrPersonField getCombinationAuthorshipField() {
|
932
|
return combinationAuthorshipField;
|
933
|
}
|
934
|
|
935
|
/**
|
936
|
* @return the exCombinationAuthorshipField
|
937
|
*/
|
938
|
@Override
|
939
|
public TeamOrPersonField getExCombinationAuthorshipField() {
|
940
|
return exCombinationAuthorshipField;
|
941
|
}
|
942
|
|
943
|
@Override
|
944
|
public NameRelationField getValidationField(){
|
945
|
return validationField;
|
946
|
}
|
947
|
|
948
|
@Override
|
949
|
public NameRelationField getOrthographicVariantField() {
|
950
|
return orthographicVariantField;
|
951
|
}
|
952
|
|
953
|
@Override
|
954
|
public void enableMode(TaxonNamePopupEditorMode mode){
|
955
|
modesActive.add(mode);
|
956
|
}
|
957
|
|
958
|
@Override
|
959
|
public boolean isModeEnabled(TaxonNamePopupEditorMode mode){
|
960
|
return modesActive.contains(mode);
|
961
|
}
|
962
|
|
963
|
@Override
|
964
|
public void disableMode(TaxonNamePopupEditorMode mode){
|
965
|
modesActive.remove(mode);
|
966
|
}
|
967
|
|
968
|
@Override
|
969
|
public EnumSet<TaxonNamePopupEditorMode> getModesActive(){
|
970
|
return modesActive;
|
971
|
}
|
972
|
|
973
|
@Override
|
974
|
public CheckBox getBasionymToggle() {
|
975
|
return basionymToggle;
|
976
|
}
|
977
|
|
978
|
@Override
|
979
|
public FilterableAnnotationsField getAnnotationsField() {
|
980
|
return annotationsListField;
|
981
|
}
|
982
|
|
983
|
/**
|
984
|
* {@inheritDoc}
|
985
|
*/
|
986
|
@Override
|
987
|
public void setReadOnly(boolean readOnly) {
|
988
|
boolean basionymToggleReadonly = basionymToggle.isReadOnly();
|
989
|
boolean validationToggleReadonly = validationToggle.isReadOnly();
|
990
|
super.setReadOnly(readOnly);
|
991
|
combinationAuthorshipField.setEditorReadOnly(readOnly);
|
992
|
exCombinationAuthorshipField.setEditorReadOnly(readOnly);
|
993
|
basionymAuthorshipField.setEditorReadOnly(readOnly);
|
994
|
exBasionymAuthorshipField.setEditorReadOnly(readOnly);
|
995
|
// preserve old readonly states if they were true
|
996
|
if(basionymToggleReadonly){
|
997
|
basionymToggle.setReadOnly(true);
|
998
|
}
|
999
|
if(validationToggleReadonly){
|
1000
|
validationToggle.setReadOnly(true);
|
1001
|
}
|
1002
|
}
|
1003
|
|
1004
|
|
1005
|
|
1006
|
/**
|
1007
|
* @return the infraGenericEpithetField
|
1008
|
*/
|
1009
|
@Override
|
1010
|
public AbstractField<String> getInfraGenericEpithetField() {
|
1011
|
return infraGenericEpithetField;
|
1012
|
}
|
1013
|
|
1014
|
/**
|
1015
|
* @return the specificEpithetField
|
1016
|
*/
|
1017
|
@Override
|
1018
|
public AbstractField<String> getSpecificEpithetField() {
|
1019
|
return specificEpithetField;
|
1020
|
}
|
1021
|
|
1022
|
/**
|
1023
|
* @return the infraSpecificEpithetField
|
1024
|
*/
|
1025
|
@Override
|
1026
|
public AbstractField<String> getInfraSpecificEpithetField() {
|
1027
|
return infraSpecificEpithetField;
|
1028
|
}
|
1029
|
|
1030
|
|
1031
|
}
|