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/**
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* Copyright (C) 2017 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.cdm.vaadin.view.registration;
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import java.util.ArrayList;
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import java.util.Arrays;
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import java.util.Collection;
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import java.util.EnumSet;
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import java.util.HashMap;
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import java.util.HashSet;
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import java.util.List;
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import java.util.Map;
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import java.util.Objects;
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import java.util.Set;
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import java.util.Stack;
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import java.util.UUID;
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import org.apache.log4j.Logger;
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import org.springframework.beans.factory.annotation.Autowired;
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import org.springframework.transaction.TransactionStatus;
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import org.vaadin.spring.events.EventScope;
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import org.vaadin.spring.events.annotation.EventBusListenerMethod;
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import com.vaadin.server.SystemError;
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import com.vaadin.spring.annotation.SpringComponent;
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import com.vaadin.spring.annotation.ViewScope;
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import com.vaadin.ui.AbstractField;
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import com.vaadin.ui.Button;
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import com.vaadin.ui.Label;
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import com.vaadin.ui.UI;
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import com.vaadin.ui.VerticalLayout;
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import com.vaadin.ui.Window;
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import eu.etaxonomy.cdm.api.service.INameService;
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import eu.etaxonomy.cdm.api.service.IRegistrationService;
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import eu.etaxonomy.cdm.api.service.config.RegistrationStatusTransitions;
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import eu.etaxonomy.cdm.api.service.dto.RegistrationDTO;
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import eu.etaxonomy.cdm.api.service.dto.RegistrationWorkingSet;
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import eu.etaxonomy.cdm.api.service.exception.RegistrationValidationException;
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import eu.etaxonomy.cdm.api.service.name.TypeDesignationSetManager.TypeDesignationWorkingSetType;
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import eu.etaxonomy.cdm.api.service.registration.IRegistrationWorkingSetService;
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import eu.etaxonomy.cdm.api.utility.RoleProber;
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import eu.etaxonomy.cdm.api.utility.UserHelper;
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import eu.etaxonomy.cdm.cache.CdmTransientEntityAndUuidCacher;
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import eu.etaxonomy.cdm.database.PermissionDeniedException;
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import eu.etaxonomy.cdm.ext.common.ExternalServiceException;
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import eu.etaxonomy.cdm.ext.registration.messages.IRegistrationMessageService;
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import eu.etaxonomy.cdm.model.ICdmEntityUuidCacher;
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import eu.etaxonomy.cdm.model.common.CdmBase;
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import eu.etaxonomy.cdm.model.common.User;
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import eu.etaxonomy.cdm.model.name.NameTypeDesignation;
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import eu.etaxonomy.cdm.model.name.Rank;
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import eu.etaxonomy.cdm.model.name.Registration;
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import eu.etaxonomy.cdm.model.name.RegistrationStatus;
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import eu.etaxonomy.cdm.model.name.TaxonName;
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import eu.etaxonomy.cdm.model.name.TaxonNameFactory;
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import eu.etaxonomy.cdm.model.name.TypeDesignationBase;
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import eu.etaxonomy.cdm.model.reference.Reference;
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import eu.etaxonomy.cdm.model.reference.ReferenceType;
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import eu.etaxonomy.cdm.persistence.hibernate.permission.CRUD;
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import eu.etaxonomy.cdm.ref.EntityReference;
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import eu.etaxonomy.cdm.ref.TypedEntityReference;
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import eu.etaxonomy.cdm.service.CdmFilterablePagingProvider;
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import eu.etaxonomy.cdm.service.CdmFilterablePagingProviderFactory;
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import eu.etaxonomy.cdm.service.CdmStore;
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import eu.etaxonomy.cdm.service.UserHelperAccess;
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import eu.etaxonomy.cdm.vaadin.component.CdmBeanItemContainerFactory;
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import eu.etaxonomy.cdm.vaadin.component.registration.RegistrationItem;
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import eu.etaxonomy.cdm.vaadin.component.registration.RegistrationStatusFieldInstantiator;
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import eu.etaxonomy.cdm.vaadin.component.registration.RegistrationStatusSelect;
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import eu.etaxonomy.cdm.vaadin.event.EditorActionContext;
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import eu.etaxonomy.cdm.vaadin.event.EditorActionTypeFilter;
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import eu.etaxonomy.cdm.vaadin.event.EntityChangeEvent;
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import eu.etaxonomy.cdm.vaadin.event.ReferenceEditorAction;
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import eu.etaxonomy.cdm.vaadin.event.RegistrationEditorAction;
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import eu.etaxonomy.cdm.vaadin.event.ShowDetailsEvent;
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import eu.etaxonomy.cdm.vaadin.event.ShowDetailsEventEntityTypeFilter;
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import eu.etaxonomy.cdm.vaadin.event.TaxonNameEditorAction;
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import eu.etaxonomy.cdm.vaadin.event.TypeDesignationWorkingsetEditorAction;
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import eu.etaxonomy.cdm.vaadin.event.registration.RegistrationWorkingsetAction;
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import eu.etaxonomy.cdm.vaadin.permission.AccessRestrictedView;
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import eu.etaxonomy.cdm.vaadin.permission.RolesAndPermissions;
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import eu.etaxonomy.cdm.vaadin.theme.EditValoTheme;
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import eu.etaxonomy.cdm.vaadin.ui.RegistrationUIDefaults;
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import eu.etaxonomy.cdm.vaadin.ui.config.TaxonNamePopupEditorConfig;
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import eu.etaxonomy.cdm.vaadin.util.CdmTitleCacheCaptionGenerator;
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import eu.etaxonomy.cdm.vaadin.view.name.CachingPresenter;
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import eu.etaxonomy.cdm.vaadin.view.name.NameTypeDesignationPopupEditor;
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import eu.etaxonomy.cdm.vaadin.view.name.SpecimenTypeDesignationWorkingsetPopupEditor;
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import eu.etaxonomy.cdm.vaadin.view.name.TaxonNameEditorPresenter;
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import eu.etaxonomy.cdm.vaadin.view.name.TaxonNamePopupEditor;
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import eu.etaxonomy.cdm.vaadin.view.name.TypeDesignationWorkingsetEditorIdSet;
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import eu.etaxonomy.cdm.vaadin.view.reference.ReferencePopupEditor;
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import eu.etaxonomy.vaadin.mvp.AbstractPopupEditor;
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import eu.etaxonomy.vaadin.mvp.AbstractPresenter;
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import eu.etaxonomy.vaadin.mvp.AbstractView;
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import eu.etaxonomy.vaadin.mvp.BeanInstantiator;
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import eu.etaxonomy.vaadin.ui.navigation.NavigationEvent;
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import eu.etaxonomy.vaadin.ui.view.DoneWithPopupEvent;
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import eu.etaxonomy.vaadin.ui.view.DoneWithPopupEvent.Reason;
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/**
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* @author a.kohlbecker
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* @since Mar 3, 2017
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*
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*/
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@SpringComponent
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@ViewScope
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public class RegistrationWorkingsetPresenter extends AbstractPresenter<RegistrationWorkingsetView> implements CachingPresenter {
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private static final Logger logger = Logger.getLogger(RegistrationWorkingsetPresenter.class);
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private static final long serialVersionUID = 1L;
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@Autowired
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private IRegistrationWorkingSetService regWorkingSetService;
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@Autowired
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private IRegistrationMessageService messageService;
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@Autowired
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private CdmFilterablePagingProviderFactory pagingProviderFactory;
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/**
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* @return the regWorkingSetService
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*/
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public IRegistrationWorkingSetService getWorkingSetService() {
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return regWorkingSetService;
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}
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private RegistrationWorkingSet workingset;
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/**
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* Contains the poupeditor which has neen opend to start the registration of a new name as long as it has not been saved or canceled.
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* There can always only be one popup editor for this purpose.
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*/
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private TaxonNamePopupEditor newNameForRegistrationPopupEditor = null;
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/**
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* Contains
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*/
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private List<Registration> newNameBlockingRegistrations = new ArrayList<>();
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private Map<NameTypeDesignationPopupEditor, UUID> nameTypeDesignationPopupEditorRegistrationUUIDMap = new HashMap<>();
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private ICdmEntityUuidCacher cache;
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private Collection<CdmBase> rootEntities = new HashSet<>();
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/**
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*
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*/
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public RegistrationWorkingsetPresenter() {
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}
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/**
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* Always create a new Store
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*
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* @return
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*/
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protected CdmStore<Registration, IRegistrationService> getRegistrationStore(){
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return new CdmStore<Registration, IRegistrationService>(getRepo(), getRepo().getRegistrationService());
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}
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/**
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* Always create a new Store
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*
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* @return
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*/
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protected CdmStore<TaxonName, INameService> getTaxonNameStore(){
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return new CdmStore<TaxonName, INameService>(getRepo(), getRepo().getNameService());
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}
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/**
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* Checks
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* <ol>
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* <li>if there is NOT any registration for this name created in the current registration system</li>
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* <li>Checks if the name belongs to the current workingset</li>
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* </ol>
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* If both checks are successful the method returns <code>true</code>.
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*/
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public boolean canCreateNameRegistrationFor(TaxonName name) {
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return !getRepo().getRegistrationService().checkRegistrationExistsFor(name) && checkWokingsetContainsProtologe(name);
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}
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/**
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* @param name
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* @return
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*/
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public boolean checkWokingsetContainsProtologe(TaxonName name) {
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Reference nomRef = name.getNomenclaturalReference();
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UUID citationUuid = workingset.getCitationUuid();
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// @formatter:off
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return nomRef != null && (
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// nomref matches
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nomRef.getUuid().equals(citationUuid) ||
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// nomref.inreference matches
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(nomRef.getType() != null && nomRef.getType() == ReferenceType.Section && nomRef.getInReference() != null && nomRef.getInReference().getUuid().equals(citationUuid))
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);
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// @formatter:on
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}
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/**
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* @param doReload TODO
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*
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*/
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protected void refreshView(boolean doReload) {
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if(workingset == null){
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return; // nothing to do
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}
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if(doReload){
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loadWorkingSet(workingset.getCitationUuid());
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}
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applyWorkingset();
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}
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/**
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* {@inheritDoc}
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*/
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@Override
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public void handleViewEntered() {
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super.handleViewEntered();
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// TODO currently cannot specify type more precisely, see AbstractSelect
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// FIXME externalize into class file!!!!!!!!!!!!
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getView().setStatusComponentInstantiator(new RegistrationStatusFieldInstantiator<Object>(){
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private static final long serialVersionUID = 7099181280977511048L;
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@Override
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public AbstractField<Object> create(RegistrationDTO regDto) {
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CdmBeanItemContainerFactory selectFieldFactory = new CdmBeanItemContainerFactory(getRepo());
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// submitters have GrantedAuthorities like REGISTRATION(PREPARATION).[UPDATE]{ab4459eb-3b96-40ba-bfaa-36915107d59e}
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UserHelper userHelper = UserHelperAccess.userHelper().withCache(getCache());
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Set<RegistrationStatus> availableStatus = new HashSet<>();
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boolean canChangeStatus = userHelper.userHasPermission(regDto.registration(), CRUD.UPDATE);
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availableStatus.add(regDto.getStatus());
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if(canChangeStatus){
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if(userHelper.userIsAdmin()){
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availableStatus.addAll(Arrays.asList(RegistrationStatus.values()));
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} else {
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availableStatus.addAll(RegistrationStatusTransitions.possibleTransitions(regDto.getStatus()));
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}
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}
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RegistrationStatusSelect select = new RegistrationStatusSelect(null, selectFieldFactory.buildBeanItemContainer(
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RegistrationStatus.class,
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availableStatus.toArray(new RegistrationStatus[availableStatus.size()]))
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);
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select.setValue(regDto.getStatus());
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select.addValueChangeListener(e -> saveRegistrationStatusChange(regDto.getUuid(), e.getProperty().getValue()));
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select.setEnabled(canChangeStatus);
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select.setNullSelectionAllowed(false);
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return select;
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}
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});
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loadWorkingSet(getView().getCitationUuid());
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applyWorkingset();
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}
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private void applyWorkingset(){
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getView().setWorkingset(workingset);
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// PagingProviders and CacheGenerator for the existingNameCombobox
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activateComboboxes();
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// update the messages
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// updateMessages(); // disabled see #7908
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}
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protected void activateComboboxes() {
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CdmTitleCacheCaptionGenerator<TaxonName> titleCacheGenerator = new CdmTitleCacheCaptionGenerator<TaxonName>();
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getView().getAddExistingNameCombobox().setCaptionGenerator(titleCacheGenerator);
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CdmFilterablePagingProvider<TaxonName, TaxonName> pagingProvider = pagingProviderFactory.taxonNamesWithoutOrthophicIncorrect();
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getView().getAddExistingNameCombobox().loadFrom(pagingProvider, pagingProvider, pagingProvider.getPageSize());
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}
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protected void updateMessages() {
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User user = UserHelperAccess.userHelper().user();
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for (UUID registrationUuid : getView().getRegistrationItemMap().keySet()) {
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Button messageButton = getView().getRegistrationItemMap().get(registrationUuid).regItemButtons.getMessagesButton();
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RegistrationDTO regDto = workingset.getRegistrationDTO(registrationUuid).get();
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try {
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int messageCount = messageService.countActiveMessagesFor(regDto.registration(), user);
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boolean activeMessages = messageCount > 0;
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boolean currentUserIsSubmitter = regDto.getSubmitterUserName() != null && regDto.getSubmitterUserName().equals(UserHelperAccess.userHelper().userName());
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boolean currentUserIsCurator = UserHelperAccess.userHelper().userIs(new RoleProber(RolesAndPermissions.ROLE_CURATION));
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messageButton.setEnabled(false);
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if(currentUserIsCurator){
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if(currentUserIsSubmitter){
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messageButton.setDescription("No point sending messages to your self.");
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} else {
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messageButton.setEnabled(true);
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messageButton.setDescription("Open the messages dialog.");
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}
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} else {
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messageButton.setDescription("Sorry, only a curator can start a conversation.");
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}
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if(activeMessages){
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messageButton.setEnabled(true);
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messageButton.addStyleName(EditValoTheme.BUTTON_HIGHLITE);
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String who = currentUserIsSubmitter ? "curator" : "submitter";
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messageButton.setDescription("The " + who + " is looking forward to your reply.");
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}
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} catch (ExternalServiceException e) {
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messageButton.setComponentError(new SystemError(e.getMessage(), e));
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}
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}
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}
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/**
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* @param referenceID
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*/
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protected void loadWorkingSet(UUID referenceUuid) {
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try {
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workingset = getWorkingSetService().loadWorkingSetByReferenceUuid(referenceUuid, true);
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} catch (RegistrationValidationException error) {
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logger.error(error);
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showErrorDialog("Validation Error", error.getMessage());
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} catch(PermissionDeniedException e){
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logger.info(e);
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((AccessRestrictedView)getView()).setAccessDeniedMessage(e.getMessage());
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}
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cache = new CdmTransientEntityAndUuidCacher(this);
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for(Registration registration : workingset.getRegistrations()) {
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addRootEntity(registration);
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}
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}
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/**
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* @param errorDialogCaption
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* @param errorMessage
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*/
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public void showErrorDialog(String errorDialogCaption, String errorMessage) {
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Window errorDialog = new Window(errorDialogCaption);
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errorDialog.setModal(true);
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VerticalLayout subContent = new VerticalLayout();
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subContent.setMargin(true);
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errorDialog.setContent(subContent);
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subContent.addComponent(new Label(errorMessage));
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UI.getCurrent().addWindow(errorDialog);
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}
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private void saveRegistrationStatusChange(UUID uuid, Object value) {
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Registration reg = getRepo().getRegistrationService().load(uuid);
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if(reg == null){
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// registration was not yet persisted, ignore
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return;
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}
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if(value != null && value instanceof RegistrationStatus){
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if(!Objects.equals(value, reg.getStatus())){
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reg.updateStatusAndDate((RegistrationStatus)value);
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getRegistrationStore().saveBean(reg, (AbstractView)getView());
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refreshView(true);
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}
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} else {
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// only log here as error
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logger.error("Ivalid attempt to set RegistrationStatus to " + Objects.toString(value.toString(), "NULL"));
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}
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}
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@EventBusListenerMethod(filter = EditorActionTypeFilter.Add.class)
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public void onReferenceEditorActionAdd(ReferenceEditorAction event) {
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if(!checkFromOwnView(event)){
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return;
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}
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ReferencePopupEditor popup = openPopupEditor(ReferencePopupEditor.class, event);
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popup.withReferenceTypes(RegistrationUIDefaults.PRINTPUB_REFERENCE_TYPES);
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popup.loadInEditor(null);
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}
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@EventBusListenerMethod(filter = EditorActionTypeFilter.Edit.class)
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public void onReferenceEditorActionEdit(ReferenceEditorAction event) {
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if(!checkFromOwnView(event)){
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return;
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}
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396
|
ReferencePopupEditor popup = openPopupEditor(ReferencePopupEditor.class, event);
|
397
|
popup.withReferenceTypes(RegistrationUIDefaults.PRINTPUB_REFERENCE_TYPES);
|
398
|
popup.withDeleteButton(true);
|
399
|
popup.loadInEditor(event.getEntityUuid());
|
400
|
}
|
401
|
|
402
|
@EventBusListenerMethod
|
403
|
public void onDoneWithReferencePopupEditor(DoneWithPopupEvent event) throws RegistrationValidationException{
|
404
|
if(event.getPopup() instanceof ReferencePopupEditor){
|
405
|
if(event.getReason().equals(Reason.SAVE)){
|
406
|
refreshView(true);
|
407
|
}
|
408
|
}
|
409
|
}
|
410
|
|
411
|
@EventBusListenerMethod
|
412
|
public void onDoneWithSpecimenTypeDesignationWorkingsetPopupEditor(DoneWithPopupEvent event) throws RegistrationValidationException{
|
413
|
if(event.getPopup() instanceof SpecimenTypeDesignationWorkingsetPopupEditor){
|
414
|
if(event.getReason().equals(Reason.SAVE)){
|
415
|
refreshView(true);
|
416
|
}
|
417
|
}
|
418
|
}
|
419
|
|
420
|
@EventBusListenerMethod(filter = EditorActionTypeFilter.Edit.class)
|
421
|
public void onRegistrationEditorAction(RegistrationEditorAction event) {
|
422
|
|
423
|
if(!checkFromOwnView(event)){
|
424
|
return;
|
425
|
}
|
426
|
|
427
|
RegistrationPopupEditor popup = openPopupEditor(RegistrationPopupEditor.class, event);
|
428
|
popup.loadInEditor(event.getEntityUuid());
|
429
|
}
|
430
|
|
431
|
@EventBusListenerMethod(filter = EditorActionTypeFilter.Edit.class)
|
432
|
public void onTaxonNameEditorActionEdit(TaxonNameEditorAction event) {
|
433
|
|
434
|
if(!checkFromOwnView(event)){
|
435
|
return;
|
436
|
}
|
437
|
|
438
|
TaxonNamePopupEditor popup = openPopupEditor(TaxonNamePopupEditor.class, event);
|
439
|
popup.setParentEditorActionContext(event.getContext(), event.getTarget());
|
440
|
popup.withDeleteButton(true);
|
441
|
TaxonNamePopupEditorConfig.configureForNomenclaturalAct(popup);
|
442
|
popup.loadInEditor(event.getEntityUuid());
|
443
|
if(event.hasSource() && event.getSource().isReadOnly()){
|
444
|
// avoid resetting readonly to false
|
445
|
popup.setReadOnly(true);
|
446
|
}
|
447
|
|
448
|
}
|
449
|
|
450
|
|
451
|
@EventBusListenerMethod(filter = EditorActionTypeFilter.Add.class)
|
452
|
public void onTaxonNameEditorActionAdd(TaxonNameEditorAction event) {
|
453
|
|
454
|
if(!checkFromOwnView(event)){
|
455
|
return;
|
456
|
}
|
457
|
|
458
|
getView().getAddNewNameRegistrationButton().setEnabled(false);
|
459
|
if(newNameForRegistrationPopupEditor == null){
|
460
|
TaxonNamePopupEditor popup = openPopupEditor(TaxonNamePopupEditor.class, event);
|
461
|
newNameForRegistrationPopupEditor = popup;
|
462
|
popup.setParentEditorActionContext(event.getContext(), event.getTarget());
|
463
|
popup.grantToCurrentUser(EnumSet.of(CRUD.UPDATE,CRUD.DELETE));
|
464
|
popup.withDeleteButton(true);
|
465
|
popup.setCdmEntityInstantiator(new BeanInstantiator<TaxonName>() {
|
466
|
|
467
|
@Override
|
468
|
public TaxonName createNewBean() {
|
469
|
TaxonName newTaxonName = TaxonNameFactory.NewNameInstance(RegistrationUIDefaults.NOMENCLATURAL_CODE, Rank.SPECIES());
|
470
|
newTaxonName.setNomenclaturalReference(getRepo().getReferenceService().load(workingset.getCitationUuid(), TaxonNameEditorPresenter.REFERENCE_INIT_STRATEGY ));
|
471
|
return newTaxonName;
|
472
|
}
|
473
|
});
|
474
|
TaxonNamePopupEditorConfig.configureForNomenclaturalAct(popup);
|
475
|
popup.loadInEditor(null);
|
476
|
}
|
477
|
}
|
478
|
|
479
|
/**
|
480
|
* Creates a new <code>Registration</code> for a new name that has just been edited
|
481
|
* using a <code>TaxonNamePopupEditor</code>. The popup editor which has been opened to
|
482
|
* edit the new name was remembered in <code>newNameForRegistrationPopupEditor</code>.
|
483
|
* Any blocking registrations which have been created while editing the new name are
|
484
|
* temporarily stored in <code>newNameBlockingRegistrations</code> until the registration
|
485
|
* for the first name has been created. Additional new names are created for example
|
486
|
* when a new name as basionym, replaced synonym, etc to the new name is created.
|
487
|
* <p>
|
488
|
* See also {@link #onTaxonNameEditorActionAdd(TaxonNameEditorAction)}).
|
489
|
*
|
490
|
* @param event
|
491
|
* @throws RegistrationValidationException
|
492
|
*/
|
493
|
@EventBusListenerMethod
|
494
|
public void onDoneWithTaxonnameEditor(DoneWithPopupEvent event) throws RegistrationValidationException{
|
495
|
if(event.getPopup() instanceof TaxonNamePopupEditor){
|
496
|
if(newNameForRegistrationPopupEditor != null && event.getPopup().equals(newNameForRegistrationPopupEditor)){
|
497
|
if(event.getReason().equals(Reason.SAVE)){
|
498
|
try {
|
499
|
// TODO move into a service class --------------
|
500
|
TransactionStatus txStatus = getRepo().startTransaction();
|
501
|
UUID taxonNameUuid = newNameForRegistrationPopupEditor.getBean().getUuid();
|
502
|
if(newNameForRegistrationPopupEditor.getBean().cdmEntity().isPersited()){
|
503
|
getRepo().getSession().refresh(newNameForRegistrationPopupEditor.getBean().cdmEntity());
|
504
|
}
|
505
|
Registration reg = getRepo().getRegistrationService().createRegistrationForName(taxonNameUuid);
|
506
|
if(!newNameBlockingRegistrations.isEmpty()){
|
507
|
for(Registration blockingReg : newNameBlockingRegistrations){
|
508
|
blockingReg = getRepo().getRegistrationService().load(blockingReg.getUuid());
|
509
|
reg.getBlockedBy().add(blockingReg);
|
510
|
}
|
511
|
getRepo().getRegistrationService().saveOrUpdate(reg);
|
512
|
newNameBlockingRegistrations.clear();
|
513
|
}
|
514
|
getRepo().commitTransaction(txStatus);
|
515
|
// --------------------------------------------------
|
516
|
// reload workingset into current session
|
517
|
loadWorkingSet(workingset.getCitationUuid());
|
518
|
} finally {
|
519
|
getRepo().getSession().clear(); // #7702
|
520
|
refreshView(true);
|
521
|
getView().getAddNewNameRegistrationButton().setEnabled(true);
|
522
|
}
|
523
|
}
|
524
|
// nullify and clear the memory on this popup editor in any case (SAVE, CANCEL, DELETE)
|
525
|
newNameForRegistrationPopupEditor = null;
|
526
|
newNameBlockingRegistrations.clear();
|
527
|
getView().getAddNewNameRegistrationButton().setEnabled(true);
|
528
|
} else {
|
529
|
refreshView(true);
|
530
|
}
|
531
|
}
|
532
|
}
|
533
|
|
534
|
|
535
|
/**
|
536
|
* Creates a new Registration for an exiting (previously published) name.
|
537
|
*
|
538
|
* @param event
|
539
|
* @throws RegistrationValidationException
|
540
|
*/
|
541
|
@EventBusListenerMethod
|
542
|
public void onRegistrationWorkflowEventActionStart(RegistrationWorkingsetAction event) throws RegistrationValidationException {
|
543
|
|
544
|
if(!event.isStart()){
|
545
|
return;
|
546
|
}
|
547
|
|
548
|
getView().getAddExistingNameCombobox().commit(); // update the chosen value in the datasource
|
549
|
TaxonName typifiedName = getView().getAddExistingNameCombobox().getValue();
|
550
|
if(typifiedName != null){
|
551
|
boolean doReloadWorkingSet = false;
|
552
|
try {
|
553
|
// TODO move into a service class --------------
|
554
|
TransactionStatus txStatus = getRepo().startTransaction(true);
|
555
|
Reference citation = getRepo().getReferenceService().load(workingset.getCitationUuid(), Arrays.asList("authorship.$", "inReference.authorship.$"));
|
556
|
// here we completely ignore the ExistingNameRegistrationType since the user should not have the choice
|
557
|
// to create a typification only registration in the working (publication) set which contains
|
558
|
// the protologe. This is known from the nomenclatural reference.
|
559
|
if(canCreateNameRegistrationFor(typifiedName)){
|
560
|
// the citation which is the base for workingset contains the protologe of the name and the name has not
|
561
|
// been registered before:
|
562
|
// create a registration for the name and the first typifications
|
563
|
Registration newRegistrationWithExistingName = getRepo().getRegistrationService().createRegistrationForName(typifiedName.getUuid());
|
564
|
workingset.add(new RegistrationDTO(newRegistrationWithExistingName, typifiedName, citation));
|
565
|
doReloadWorkingSet = true;
|
566
|
} else {
|
567
|
if(!checkWokingsetContainsProtologe(typifiedName)){
|
568
|
// create a typification only registration
|
569
|
Registration typificationOnlyRegistration = getRepo().getRegistrationService().newRegistration();
|
570
|
if(!getRepo().getRegistrationService().checkRegistrationExistsFor(typifiedName)){
|
571
|
// oops, yet no registration for this name, so we create it as blocking registration:
|
572
|
Registration blockingNameRegistration = getRepo().getRegistrationService().createRegistrationForName(typifiedName.getUuid());
|
573
|
typificationOnlyRegistration.getBlockedBy().add(blockingNameRegistration);
|
574
|
}
|
575
|
RegistrationDTO regDTO = new RegistrationDTO(typificationOnlyRegistration, typifiedName, citation);
|
576
|
workingset.add(regDTO);
|
577
|
}
|
578
|
}
|
579
|
getRepo().commitTransaction(txStatus);
|
580
|
// --------------------------------------------------
|
581
|
// tell the view to update the workingset
|
582
|
} finally {
|
583
|
getRepo().getSession().clear(); // #7702;
|
584
|
refreshView(doReloadWorkingSet);
|
585
|
getView().getAddExistingNameRegistrationButton().setEnabled(false);
|
586
|
}
|
587
|
} else {
|
588
|
logger.error("Seletced name is NULL");
|
589
|
}
|
590
|
|
591
|
}
|
592
|
|
593
|
|
594
|
@EventBusListenerMethod(filter = EditorActionTypeFilter.Edit.class)
|
595
|
public void onTypeDesignationsEditorActionEdit(TypeDesignationWorkingsetEditorAction event) {
|
596
|
|
597
|
if(!checkFromOwnView(event)){
|
598
|
return;
|
599
|
}
|
600
|
|
601
|
if(event.getWorkingSetType() == TypeDesignationWorkingSetType.SPECIMEN_TYPE_DESIGNATION_WORKINGSET ){
|
602
|
SpecimenTypeDesignationWorkingsetPopupEditor popup = openPopupEditor(SpecimenTypeDesignationWorkingsetPopupEditor.class, event);
|
603
|
popup.setParentEditorActionContext(event.getContext(), event.getTarget());
|
604
|
popup.withDeleteButton(true);
|
605
|
popup.loadInEditor(new TypeDesignationWorkingsetEditorIdSet(event.getRegistrationUuid(), event.getBaseEntityRef()));
|
606
|
if(event.hasSource()){
|
607
|
// propagate readonly state from source button to popup
|
608
|
popup.setReadOnly(event.getSource().isReadOnly());
|
609
|
}
|
610
|
} else {
|
611
|
NameTypeDesignationPopupEditor popup = openPopupEditor(NameTypeDesignationPopupEditor.class, event);
|
612
|
popup.setParentEditorActionContext(event.getContext(), event.getTarget());
|
613
|
popup.withDeleteButton(true);
|
614
|
popup.loadInEditor(new TypeDesignationWorkingsetEditorIdSet(event.getRegistrationUuid(), event.getBaseEntityRef()));
|
615
|
|
616
|
popup.getCitationCombobox().setEnabled(false);
|
617
|
popup.getTypifiedNamesComboboxSelect().setEnabled(false);
|
618
|
|
619
|
if(event.hasSource()){
|
620
|
// propagate readonly state from source button to popup
|
621
|
popup.setReadOnly(event.getSource().isReadOnly());
|
622
|
}
|
623
|
nameTypeDesignationPopupEditorRegistrationUUIDMap.put(popup, event.getRegistrationUuid());
|
624
|
}
|
625
|
}
|
626
|
|
627
|
@EventBusListenerMethod(filter = EditorActionTypeFilter.Add.class)
|
628
|
public void onTypeDesignationWorkingsetAdd(TypeDesignationWorkingsetEditorAction event) {
|
629
|
|
630
|
if(!event.hasSource()){
|
631
|
return;
|
632
|
}
|
633
|
|
634
|
if(event.getWorkingSetType() == TypeDesignationWorkingSetType.SPECIMEN_TYPE_DESIGNATION_WORKINGSET){
|
635
|
SpecimenTypeDesignationWorkingsetPopupEditor popup = openPopupEditor(SpecimenTypeDesignationWorkingsetPopupEditor.class, event);
|
636
|
popup.setParentEditorActionContext(event.getContext(), event.getTarget());
|
637
|
TypeDesignationWorkingsetEditorIdSet identifierSet;
|
638
|
UUID typifiedNameUuid;
|
639
|
|
640
|
RegistrationDTO registrationDTO = workingset.getRegistrationDTO(event.getRegistrationUuid()).get();
|
641
|
EntityReference typifiedNameRef = registrationDTO.getTypifiedNameRef();
|
642
|
if(typifiedNameRef != null){
|
643
|
// case for registrations without name, in which case the typifiedName is only defined via the typedesignations
|
644
|
typifiedNameUuid = typifiedNameRef.getUuid();
|
645
|
} else {
|
646
|
// case of registrations with a name in the nomenclatural act.
|
647
|
typifiedNameUuid = registrationDTO.getNameRef().getUuid();
|
648
|
}
|
649
|
|
650
|
identifierSet = new TypeDesignationWorkingsetEditorIdSet(
|
651
|
event.getRegistrationUuid(),
|
652
|
getView().getCitationUuid(),
|
653
|
typifiedNameUuid
|
654
|
);
|
655
|
popup.grantToCurrentUser(EnumSet.of(CRUD.UPDATE, CRUD.DELETE));
|
656
|
popup.loadInEditor(identifierSet);
|
657
|
popup.withDeleteButton(true);
|
658
|
if(event.hasSource()){
|
659
|
// propagate readonly state from source component to popup
|
660
|
popup.setReadOnly(event.getSource().isReadOnly());
|
661
|
}
|
662
|
} else {
|
663
|
NameTypeDesignationPopupEditor popup = openPopupEditor(NameTypeDesignationPopupEditor.class, event);
|
664
|
popup.setParentEditorActionContext(event.getContext(), event.getTarget());
|
665
|
popup.withDeleteButton(true);
|
666
|
popup.grantToCurrentUser(EnumSet.of(CRUD.UPDATE, CRUD.DELETE));
|
667
|
RegistrationDTO regDto = workingset.getRegistrationDTO(event.getRegistrationUuid()).get();
|
668
|
Reference citation = regDto.getCitation();
|
669
|
nameTypeDesignationPopupEditorRegistrationUUIDMap.put(popup, event.getRegistrationUuid());
|
670
|
popup.setBeanInstantiator(new BeanInstantiator<NameTypeDesignation>() {
|
671
|
|
672
|
@Override
|
673
|
public NameTypeDesignation createNewBean() {
|
674
|
|
675
|
TaxonName typifiedName = getRepo().getNameService().load(event.getTypifiedNameUuid(), Arrays.asList(new String[]{"typeDesignations", "homotypicalGroup"}));
|
676
|
NameTypeDesignation nameTypeDesignation = NameTypeDesignation.NewInstance();
|
677
|
nameTypeDesignation.setCitation(citation);
|
678
|
nameTypeDesignation.getTypifiedNames().add(typifiedName);
|
679
|
return nameTypeDesignation;
|
680
|
}
|
681
|
});
|
682
|
popup.loadInEditor(null);
|
683
|
popup.getCitationCombobox().setEnabled(false);
|
684
|
popup.getTypifiedNamesComboboxSelect().setEnabled(false);
|
685
|
if(event.hasSource()){
|
686
|
// propagate readonly state from source component to popup
|
687
|
popup.setReadOnly(event.getSource().isReadOnly());
|
688
|
}
|
689
|
}
|
690
|
}
|
691
|
|
692
|
/**
|
693
|
* Performs final actions after a TypeDesignationEditor which has been
|
694
|
* opened to add a TypeDesignation to a Registration object which was
|
695
|
* created for an previously published name. Prior adding a typedesignation,
|
696
|
* the according Registration object is dangling, that has no association to
|
697
|
* any entity denoting an nomenclatural act which has a reference to a
|
698
|
* publication. This means that the registration object is not in the
|
699
|
* working set.
|
700
|
*
|
701
|
*
|
702
|
* @param event
|
703
|
* @throws RegistrationValidationException
|
704
|
*/
|
705
|
@EventBusListenerMethod
|
706
|
public void onDoneWithTypeDesignationEditor(DoneWithPopupEvent event) throws RegistrationValidationException{
|
707
|
if(event.getPopup() instanceof SpecimenTypeDesignationWorkingsetPopupEditor){
|
708
|
if(event.getReason().equals(Reason.SAVE)){
|
709
|
// NOTE: adding the SpecimenTypeDesignations to the registration is done in the
|
710
|
// SpecimenTypeDesignationWorkingSetServiceImpl.save(SpecimenTypeDesignationWorkingSetDTO dto) method
|
711
|
refreshView(true);
|
712
|
} else if(event.getReason().equals(Reason.CANCEL)){
|
713
|
// noting to do
|
714
|
}
|
715
|
} else if(event.getPopup() instanceof NameTypeDesignationPopupEditor){
|
716
|
if(event.getReason().equals(Reason.SAVE)){
|
717
|
UUID typeDesignationUuid = ((NameTypeDesignationPopupEditor)event.getPopup()).getBean().getUuid();
|
718
|
getRepo().getSession().clear();
|
719
|
UUID regUUID = nameTypeDesignationPopupEditorRegistrationUUIDMap.get(event.getPopup());
|
720
|
getRepo().getRegistrationService().addTypeDesignation(regUUID, typeDesignationUuid);
|
721
|
getRepo().getSession().clear();
|
722
|
nameTypeDesignationPopupEditorRegistrationUUIDMap.remove(event.getPopup());
|
723
|
refreshView(true);
|
724
|
} else if(event.getReason().equals(Reason.CANCEL)){
|
725
|
// noting to do
|
726
|
}
|
727
|
|
728
|
}
|
729
|
// ignore other editors
|
730
|
}
|
731
|
|
732
|
|
733
|
@EventBusListenerMethod(filter = ShowDetailsEventEntityTypeFilter.RegistrationWorkingSet.class)
|
734
|
public void onShowDetailsEventForRegistrationWorkingSet(ShowDetailsEvent<RegistrationWorkingSet,?> event) {
|
735
|
|
736
|
if(event.getProperty().equals(RegistrationItem.VALIDATION_PROBLEMS)){
|
737
|
List<String> messages = new ArrayList<>();
|
738
|
for(RegistrationDTO dto : workingset.getRegistrationDTOs()){
|
739
|
dto.getValidationProblems().forEach(m -> messages.add(dto.getSummary() + ": " + m));
|
740
|
}
|
741
|
getView().openDetailsPopup("Validation Problems", messages);
|
742
|
}
|
743
|
}
|
744
|
|
745
|
@EventBusListenerMethod
|
746
|
public void onEntityChangeEvent(EntityChangeEvent event){
|
747
|
|
748
|
if(workingset == null){
|
749
|
return;
|
750
|
}
|
751
|
if(Reference.class.isAssignableFrom(event.getEntityType())){
|
752
|
|
753
|
if(workingset.getCitationUuid().equals(event.getEntityUuid())){
|
754
|
if(event.isRemovedType()){
|
755
|
viewEventBus.publish(EventScope.UI, this, new NavigationEvent(StartRegistrationViewBean.NAME));
|
756
|
} else {
|
757
|
refreshView(true);
|
758
|
}
|
759
|
}
|
760
|
|
761
|
} else
|
762
|
if(Registration.class.isAssignableFrom(event.getEntityType())){
|
763
|
if(workingset.getRegistrations().stream().anyMatch(reg -> reg.getUuid() == event.getEntityUuid())){
|
764
|
refreshView(true);
|
765
|
}
|
766
|
} else
|
767
|
if(TaxonName.class.isAssignableFrom(event.getEntityType())){
|
768
|
if(event.getType().equals(EntityChangeEvent.Type.CREATED)){
|
769
|
Stack<EditorActionContext>context = ((AbstractPopupEditor)event.getSourceView()).getEditorActionContext();
|
770
|
EditorActionContext rootContext = context.get(0);
|
771
|
if(rootContext.getParentView().equals(getView()) && event.getSourceView() != newNameForRegistrationPopupEditor){
|
772
|
|
773
|
try {
|
774
|
getRepo().getSession().clear();
|
775
|
TransactionStatus txStatus = getRepo().startTransaction();
|
776
|
// create a blocking registration, the new Registration will be persisted
|
777
|
UUID taxonNameUUID = event.getEntityUuid();
|
778
|
Registration blockingRegistration = getRepo().getRegistrationService().createRegistrationForName(taxonNameUUID);
|
779
|
|
780
|
if(context.get(1).getParentView() instanceof TaxonNamePopupEditor && !((TaxonNamePopupEditor)context.get(1).getParentView()).getBean().cdmEntity().isPersited()){
|
781
|
// Oha!! The event came from a popup editor and the
|
782
|
// first popup in the context is a TaxonNameEditor with un-persisted name
|
783
|
// This is a name for a new registration which has not yet been created.
|
784
|
// It is necessary to store blocking registrations in the newNameBlockingRegistrations
|
785
|
newNameBlockingRegistrations.add(blockingRegistration);
|
786
|
logger.debug("Blocking registration created and memorized");
|
787
|
} else {
|
788
|
// some new name related somehow to an existing registration
|
789
|
TypedEntityReference<Registration> regReference = (TypedEntityReference<Registration>)rootContext.getParentEntity();
|
790
|
RegistrationDTO registrationDTO = workingset.getRegistrationDTO(regReference.getUuid()).get();
|
791
|
Registration registration = registrationDTO.registration();
|
792
|
|
793
|
registration = getRepo().getRegistrationService().load(registration.getUuid());
|
794
|
if(registration == null){
|
795
|
throw new NullPointerException("Registration not found for " + regReference + " which has been hold in the rootContext");
|
796
|
}
|
797
|
registration.getBlockedBy().add(blockingRegistration);
|
798
|
getRepo().getRegistrationService().saveOrUpdate(registration);
|
799
|
getRepo().commitTransaction(txStatus);
|
800
|
logger.debug("Blocking registration created and added to registion");
|
801
|
}
|
802
|
} finally {
|
803
|
getRepo().getSession().clear();
|
804
|
}
|
805
|
} else {
|
806
|
// in case of creating a new name for a registration the parent view is the TaxonNamePopupEditor
|
807
|
// this is set
|
808
|
logger.debug("Non blocking registration, since a new name for a new registration has been created");
|
809
|
}
|
810
|
}
|
811
|
if(workingset.getRegistrationDTOs().stream().anyMatch(reg ->
|
812
|
reg.getTypifiedNameRef() != null
|
813
|
&& reg.getTypifiedNameRef().getUuid().equals(event.getEntityUuid()))){
|
814
|
refreshView(true);
|
815
|
}
|
816
|
} else
|
817
|
if(TypeDesignationBase.class.isAssignableFrom(event.getEntityType())){
|
818
|
if(workingset.getRegistrationDTOs().stream().anyMatch(
|
819
|
reg -> reg.typeDesignations() != null && reg.typeDesignations().stream().anyMatch(
|
820
|
td -> td.getUuid() == event.getEntityUuid()
|
821
|
)
|
822
|
)
|
823
|
){
|
824
|
refreshView(true);
|
825
|
}
|
826
|
}
|
827
|
}
|
828
|
|
829
|
@EventBusListenerMethod(filter = ShowDetailsEventEntityTypeFilter.RegistrationDTO.class)
|
830
|
public void onShowDetailsEventForRegistrationDTO(ShowDetailsEvent<RegistrationDTO, UUID> event) {
|
831
|
|
832
|
// FIXME check from own view!!!
|
833
|
if(getView() == null){
|
834
|
return;
|
835
|
}
|
836
|
|
837
|
UUID registrationUuid = event.getIdentifier();
|
838
|
|
839
|
RegistrationDTO regDto = getWorkingSetService().loadDtoByUuid(registrationUuid);
|
840
|
if(event.getProperty().equals(RegistrationItem.BLOCKED_BY)){
|
841
|
|
842
|
Set<RegistrationDTO> blockingRegs = getWorkingSetService().loadBlockingRegistrations(registrationUuid);
|
843
|
getView().setBlockingRegistrations(registrationUuid, blockingRegs);
|
844
|
} else if(event.getProperty().equals(RegistrationItem.MESSAGES)){
|
845
|
|
846
|
RegistrationMessagesPopup popup = openPopupEditor(RegistrationMessagesPopup.class, null);
|
847
|
popup.loadMessagesFor(regDto.getUuid());
|
848
|
|
849
|
} else if(event.getProperty().equals(RegistrationItem.VALIDATION_PROBLEMS)){
|
850
|
getView().openDetailsPopup("Validation Problems", regDto.getValidationProblems());
|
851
|
}
|
852
|
}
|
853
|
|
854
|
/**
|
855
|
* {@inheritDoc}
|
856
|
*/
|
857
|
@Override
|
858
|
public ICdmEntityUuidCacher getCache() {
|
859
|
return cache;
|
860
|
}
|
861
|
|
862
|
/**
|
863
|
* {@inheritDoc}
|
864
|
*/
|
865
|
@Override
|
866
|
public void addRootEntity(CdmBase entity) {
|
867
|
rootEntities.add(entity);
|
868
|
cache.load(entity);
|
869
|
}
|
870
|
|
871
|
|
872
|
/**
|
873
|
* {@inheritDoc}
|
874
|
*/
|
875
|
@Override
|
876
|
public Collection<CdmBase> getRootEntities() {
|
877
|
return rootEntities;
|
878
|
}
|
879
|
|
880
|
@Override
|
881
|
public void destroy() throws Exception {
|
882
|
super.destroy();
|
883
|
disposeCache();
|
884
|
}
|
885
|
|
886
|
/**
|
887
|
* {@inheritDoc}
|
888
|
*/
|
889
|
@Override
|
890
|
public void disposeCache() {
|
891
|
cache.dispose();
|
892
|
}
|
893
|
|
894
|
}
|