Revision 19730251
Added by Cherian Mathew about 9 years ago
| src/main/java/eu/etaxonomy/cdm/vaadin/presenter/NewTaxonBasePresenter.java | ||
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import java.util.List; |
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import java.util.UUID; |
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import eu.etaxonomy.cdm.api.service.INameService; |
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import org.springframework.transaction.TransactionStatus; |
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import eu.etaxonomy.cdm.api.application.ICdmApplicationConfiguration; |
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import eu.etaxonomy.cdm.api.service.IClassificationService; |
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import eu.etaxonomy.cdm.api.service.IReferenceService; |
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import eu.etaxonomy.cdm.api.service.ITaxonNodeService; |
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import eu.etaxonomy.cdm.api.service.ITaxonService; |
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import eu.etaxonomy.cdm.model.common.CdmBase; |
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import eu.etaxonomy.cdm.model.name.NonViralName; |
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import eu.etaxonomy.cdm.model.reference.Reference; |
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import eu.etaxonomy.cdm.model.taxon.Classification; |
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import eu.etaxonomy.cdm.model.taxon.Synonym; |
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import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType; |
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import eu.etaxonomy.cdm.model.taxon.Taxon; |
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import eu.etaxonomy.cdm.model.taxon.TaxonNode; |
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import eu.etaxonomy.cdm.strategy.parser.NonViralNameParserImpl; |
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import eu.etaxonomy.cdm.vaadin.container.CdmSQLContainer; |
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import eu.etaxonomy.cdm.vaadin.container.IdAndUuid; |
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import eu.etaxonomy.cdm.vaadin.util.CdmSpringContextHelper; |
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private final CdmSQLContainer secRefContainer; |
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private final IReferenceService referenceService; |
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private final ITaxonNodeService taxonNodeService; |
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private final ITaxonService taxonService; |
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private final INameService nameService;
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private final IClassificationService classificationService;
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private final ICdmApplicationConfiguration app; |
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/* (non-Javadoc) |
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} |
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public NewTaxonBasePresenter() throws SQLException {
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secRefContainer = CdmSQLContainer.newInstance("Reference");
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referenceService = CdmSpringContextHelper.getReferenceService(); |
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taxonNodeService = CdmSpringContextHelper.getTaxonNodeService(); |
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taxonService = CdmSpringContextHelper.getTaxonService(); |
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nameService = CdmSpringContextHelper.getNameService(); |
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classificationService = CdmSpringContextHelper.getClassificationService(); |
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app = CdmSpringContextHelper.getApplicationConfiguration(); |
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} |
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/* (non-Javadoc) |
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* @see eu.etaxonomy.cdm.vaadin.view.INewTaxonBaseComponentListener#newTaxon(java.lang.String, java.lang.Object) |
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* @see eu.etaxonomy.cdm.vaadin.view.INewTaxonBaseComponentListener#newTaxon(java.lang.String, java.lang.Object, java.util.UUID)
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*/ |
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@Override |
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public IdAndUuid newTaxon(String scientificName, Object secRefItemId) {
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public IdAndUuid newTaxon(String scientificName, Object secRefItemId, UUID classificationUuid) {
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TransactionStatus tx = app.startTransaction(); |
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UUID uuid = secRefContainer.getUuid(secRefItemId); |
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Reference sec = CdmBase.deproxy(referenceService.load(uuid), Reference.class); |
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NonViralName name = NonViralName.NewInstance(null); |
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NonViralNameParserImpl parser = NonViralNameParserImpl.NewInstance(); |
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NonViralName name = parser.parseFullName(scientificName); |
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name.setTitleCache(scientificName, true); |
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nameService.save(name); |
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Taxon newTaxon = Taxon.NewInstance(name, sec); |
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// TODO : add new TaxonNode since we want to have it show up |
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// in the table |
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UUID newUuid = taxonService.save(newTaxon); |
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return new IdAndUuid(newTaxon.getId(), newUuid); |
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List<String> CLASSIFICATION_INIT_STRATEGY = Arrays.asList(new String []{
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"rootNode.childNodes" |
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}); |
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Classification classification = CdmBase.deproxy(classificationService.load(classificationUuid, CLASSIFICATION_INIT_STRATEGY), Classification.class); |
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TaxonNode newTaxonNode = classification.addChildTaxon(newTaxon, null, null); |
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UUID newUuid = taxonNodeService.saveOrUpdate(newTaxonNode); |
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app.commitTransaction(tx); |
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return new IdAndUuid(newTaxon.getId(), newTaxonNode.getTaxon().getUuid()); |
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} |
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/* (non-Javadoc) |
| ... | ... | |
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*/ |
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@Override |
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public IdAndUuid newSynonym(String scientificName, Object secRefItemId, UUID accTaxonUuid) {
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TransactionStatus tx = app.startTransaction(); |
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List<String> ACC_TAXON_INIT_STRATEGY = Arrays.asList(new String []{
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"synonymRelations" |
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}); |
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UUID refUuid = secRefContainer.getUuid(secRefItemId); |
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Reference sec = CdmBase.deproxy(referenceService.load(refUuid), Reference.class); |
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NonViralName name = NonViralName.NewInstance(null); |
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NonViralNameParserImpl parser = NonViralNameParserImpl.NewInstance(); |
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NonViralName name = parser.parseFullName(scientificName); |
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name.setTitleCache(scientificName, true); |
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Taxon accTaxon = CdmBase.deproxy(taxonService.load(accTaxonUuid, ACC_TAXON_INIT_STRATEGY), Taxon.class); |
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Synonym newSynonym = Synonym.NewInstance(name, sec); |
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accTaxon.addSynonym(newSynonym, SynonymRelationshipType.SYNONYM_OF()); |
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UUID newUuid = taxonService.save(newSynonym); |
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app.commitTransaction(tx); |
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return new IdAndUuid(newSynonym.getId(), newUuid); |
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} |
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Also available in: Unified diff
added classification as argument for NewTaxonBaseComposite to allow for creation of taxon node