ref #5458 Split classification and taxa in two separate combo boxes
ref #5458 Remove unnecessary method parameters
ref #5458 Remove natural sorting from node retrieval
ref #5458 Error handling
ref #5458 Add root node to node container constructor
ref #5458 refactor API method
ref #5458 Remove unnecessary text
ref #5458 Fix details view
ref #5458 add white space to SQL query
ref #5458 fix assignment of new distribution if it was null before
ref #5458 code cleanup
ref #5458 Fix and streamline SQL distribution query
ref #5458 Revert SQL streamlining
ref #5458 streamlined SQL query
ref #5458 Cleanup and stability for distribution editor
ref #5458 Code cleanup
ref #5458 Fix grouping and add ordering of taxon node table
Fix potential NPE
Fix test (There are 29 relation types now)
Optimize taxon node container #5458
Remove unused init strategy properties #54
Implement taxon node container to be used in selection view and settings window #5458
Refactored setting window to work on taxon nodes #5458
Fix compile bug in vaadin
Show classifications first in selection box #5458
Renaming #5458
Fix label of selection box #5458
Only allow taxa >= species in selection view #5458
Show list of taxon nodes in selection view #5458
Refactor presenter to work on a list of taxon nodes #5458
Refactor SQL query to work on a list of taxon nodes #5458
Vaadin H2 test database updated
minor
Revert "fix for 4.0 update"
This reverts commit f005d5fe176805dbaad3b009684875d55d0b10fe.
fix for update to 4.0
fix project for version 4.0
fix project after dependency updates
removing unwanted test file
Adapt to tagged text methods change to protected
adding missing include
ignoring test which fails on jgitflow relase finish
Adapt to changed 'save' call in services layer
updated test db for new model changes and updated test data accordingly
merged from master
testing git flow publish
testing for remote feature
removed incorrect test datasource setting and corresponding factory class
NewTaxonBasePresenterTest.xml : adjusted ids in test data to avoid unique key issue unitils.properties : reverted back to standard h2 jdbs driver
pom.xml : set explicit memory parameters for tests StatusPresenterTest : corrected test to adjust for new rank filter
NewTaxonBaseComposite : add exception handling when name already exists StatusComposite : added tab sheet with main / excluded tabs CdmQueryFactory, LeafNodeTaxonContainer : added rank filter for ranks below species aggregate NewTaxonBasePresenter : added check if name exists...
ConceptRelationshipComposite, ConceptRelationshipView : using source from event to set primary composite LeafNodeTaxonContainer : checking for nulls SelectionEvent : added source object as member StatusComposite : adding component as source instead of in the list of objects...
set default limit in sql queries to 15000
related to #4886 ConceptRelationshipComposite, D3ConceptRelationshipTree, ConceptRelationshipPresenter, IConceptRelationshipComponentListener, d3.conceptrelationshiptree_connector.js : added possibility to clear concept relationship tree CdmChangeEvent : added new constructor with possibility to add source component...
Fixed layout issues. StatusComposite : added async operation for disableing components when reloading taxa
StatusComposite : seperated init and refresh methods for the txa table, using seperate method to set visible comun ids LeafNodeTaxonContainer : corrected isSynonym method
Fixed problem for toolbar and new authentification object. Added getter method to CdmVaadinAuthentication, in order to get the principal object with user name and roles.
Merge branch 'creditor'
StatusComposite : added 'set as unresolved' action to context menu LeafNodeTaxonContainer : added sorting of synonym container
EditConceptRelationshipComposite : show notification only when creating concept relationship NewTaxonBaseComposite : added second sec. combobox for the case of creating synonyms INewTaxonBaseComponentListener, NewTaxonBasePresenter : creating separate containers for acc. taxon and synonym references...
setting authentication in security context of UI thread
fix for #4844 CdmVaadinAuthentication : new class used for authentication AuthenticationPresenter, AbstractAuthenticatedUI, CdmVaadinSessionUtilities, AuthenticationView, IAuthenticationComponent : using new authentication object linked to host and context path...
StatusComposite : using new added context menu addon instead of vaadin actions ConceptRelationshipView : setting classification combobox to read only for classifications from url
added context menu addon : https://vaadin.com/directory#!addon/contextmenu
async switched off
EditConceptRelationshipComposite, EditConceptRelationshipPresenter : hack for checking relationship rules (currently only for congruence) INewTaxonBaseComponentListener, NewTaxonBaseComposite, NewTaxonBasePresenter : Setting default secundum when addin taxon / synonym...
Fixed selection view and replaced twin selection component with combobox
fixed display issue with deproxy method
*added new config window *added settings icon *removed edit button from toolbar *added double click listener *added sql container and changed query *added popupView for better editing *saving back works properly
revert authentication check
edit/styles.scss : indent for synonyms ConceptRelationshipPresenterTest : updated json to include direction
ConceptRelationshipComposite : ui fixes for controls EditConceptRelationshipComposite : changed polling interval to 1 sec IStatusComposite, StatusComposite, StatusPresenter, ConceptRelationshipUI, ConceptRelationshipView : allowing setting of classifications via url parameters...
ConceptRelationshipComposite : added methods to update controls EditConceptRelationshipComposite : added bi-directional capability
updated test for direction info
git merge test 2
git merge test
corrected string check
ConceptRelationshipComposite : made direction aware EditConceptRelationshipComposite : made direction aware and added arrows as hints StatusComposite, ConceptRelationshipView : moved taxon table drop handler from status composite to view edit.scss, styles.css : added arrow styles
reverting back authentication hack
D3ConceptRelationshipTree, ConceptRelationshipComposite, ConceptRelationshipPresenter, ConceptRelationshipView, IConceptRelationshipComponentListener : added directional variable to display cr tree in both direction d3.conceptrelationshiptree_connector.js : updated to handle bi-directional display...
ConceptRelationshipComposite: added enabling / disabling of edit / delete buttons and firing event when edit concept relationship dialog is opened EditConceptRelationshipComposite : fixed problems with async calls , adapted to updated operation class, added show in dialog method...
new event handling system for basic event which just have a string id
ConceptRelationshipComposite, StatusComposite : implemented drag drop for new concept relationship CdmDataChangeService, SelectionService : making sure events list is cleared after fire
EditConceptRelationshipComposite : updated ui, added save + cancel + drag&drop functionality ConceptRelationshipComposite : using the EditConceptRelationshipComposite StatusComposite : set drag&drop mode ConceptRelationshipPresenter, EditConceptRelationshipPresenter : moved create, update, edit methods to EditConceptRelationshipPresenter...
EditConceptRelationshipComposite : updated composite for new and edit functionality IdAndUuid -> IdAndUuidName : new identity object with name NewTaxonBaseComposite, StatusComposite, NewTaxonBasePresenter, IConceptRelationshipComponentListener, INewTaxonBaseComponentListener : changed IdUuid to IdUuidName...
syncing with master
Merge branch 'master' of wp5.e-taxonomy.eu:/var/git/cdm-vaadin into creditor
CdmProgressComponent : Component which indicates progress via text and a progress bar NewTaxonBaseComposite, StatusComposite : Added taxon name field for synonym creation and using new operation and progress component objects StatusComposite : Corrections...
added corrected dataset
added spy.log to .gitignore corrected dataset in NewTaxonBasePresenterTest added application package to test applicationContext
properties file for p6spy (only for testing)
new component to edit taxon relationships
StatusPresenter : moved logic to container StatusComposite, NewTaxonBasePresenterTest, NewTaxonBasePresenterTest : added classification id argument for taxon creation
added classification as argument for NewTaxonBaseComposite to allow for creation of taxon node
Added test classes for javascript component integration using d3.js and the new concept relationship editor
ConceptRelationshipComposite, ConceptRelationshipPresenter, IConceptRelationshipComponentListener : composite / presenter for the new concept relationship view D3ConceptRelationshipTree, D3ConceptRelationshipTreeState : js component + state for the concept relationship composite...