EDIT

<?php

// $Id$

/**

 * Copyright (C) 2007 EDIT

 * European Distributed Institute of Taxonomy

 * http://www.e-taxonomy.eu

 *

 * The contents of this file are subject to the Mozilla Public License Version 1.1

 * See http://www.mozilla.org/MPL/MPL-1.1.html for the full license terms.

 */

/**

 * default title for a taxon page

 *

 * @param NameTO $nameTO

 * @return the formatted taxon name

 */

function theme_cdm_taxon_page_title($taxon, $uuid){

  RenderHints::pushToRenderStack('taxon_page_title');

  if(isset($taxon->name->nomenclaturalReference)){

    $referenceUri = url(path_to_reference($taxon->name->nomenclaturalReference->uuid));

  }

  $out = theme('cdm_taxonName', $taxon->name, null, $referenceUri, false);

  RenderHints::popFromRenderStack();

  return '<span class="'.$taxon->class.'">'.$out.'</span>';

}

/**

 * Default title for a name page

 * @param string $taxon_name The taxon name object

 * @return the formatted name title

 */

function theme_cdm_name_page_title($taxon_name){

  RenderHints::pushToRenderStack('taxon_page_title');

  if(isset($taxon_name->nomenclaturalReference)){

    $referenceUri = url(path_to_reference($taxon_name->nomenclaturalReference->uuid));

  }

  $out = '<span class="'.$taxon_name->class.'">'.theme('cdm_taxonName', $taxon_name, null, $referenceUri, false).'</span>';

  RenderHints::popFromRenderStack();

  return $out;

}

/**

 * A wrapper function that groups available information to show by default, when

 * a taxon page is requested by the browser.

 * Individual themeing has to decide what this page should include (see methods beneath)

 * and what information should go into tabs or should not be shown at all.

 *

 * It is headed by the name of the accepted taxon without author and reference.

 * @param $taxonTO the taxon object

 * @param $page_part name of the part to display,

 *         valid values are: 'description', 'images', 'synonymy', 'all'

 */

function theme_cdm_taxon_page($taxon, $page_part = 'description') {

  global $theme;

  $page_part = variable_get('cdm_dataportal_taxonpage_tabs', 1) ? $page_part : 'all';

  $hideTabs = array();

  // --- GET Images --- //

  $mediaQueryParameters = array("type"=>"ImageFile");

  $selectShowMedia = variable_get('cdm_dataportal_show_media', 0);

  if ($selectShowMedia == 0){

    $media = cdm_ws_get(CDM_WS_PORTAL_TAXON_MEDIA, array($taxon->uuid), queryString($mediaQueryParameters));

  }else{

    $media = cdm_ws_get(CDM_WS_PORTAL_TAXON_SUBTREE_MEDIA, array($taxon->uuid), queryString($mediaQueryParameters));

  }

  if(!isset($media[0])) {

    $hideTabs[] = theme('cdm_taxonpage_tab', 'Images');

  }

  // hideImage flag depending on administative preset

  $hideImages = false;

  if(variable_get('image_hide_rank', '0') != '0'){

    $rankCompare = rank_compare($taxon->name->rank->uuid, variable_get('image_hide_rank', '-99'));

    $hideImages =  ($rankCompare > -1);

  }

  // --- GET specimensOrObersvations --- //

  $specimensOrObersvations = cdm_ws_get(CDM_WS_TAXON, array($taxon->uuid, 'specimensOrObersvations') );

  $specimensOrObersvationsCount = is_array($specimensOrObersvations) ? count($specimensOrObersvations) : 0;

  if($specimensOrObersvationsCount == 0) {

    $hideTabs[] = theme('cdm_taxonpage_tab', 'Specimens');

  }

  // --- GET polytomousKeys --- //

  $polytomousKeysPager = cdm_ws_get(CDM_WS_POLYTOMOUSKEY, null, "findByTaxonomicScope=$taxon->uuid");

  $identificationKeyCount = 0;

  if($polytomousKeysPager){

   $identificationKeyCount += $polytomousKeysPager->count;

  }

  if($identificationKeyCount == 0){

    $hideTabs[] = theme('cdm_taxonpage_tab', 'Keys');

  }

  // -------------------------------------------- //

  // hide tabs

  $tabhide_js = '';

  foreach($hideTabs as $tabText) {

    $tabhide_js .= "$('.tabs.primary').children('li').children('a:contains(\"$tabText\")').hide();\n";

  }

  drupal_add_js("

  $(document).ready(function(){

  $tabhide_js

    });", 'inline');

  $out = '';

  $out .= theme('cdm_back_to_search_result_button');

  //var_dump(variable_get('cdm_dataportal_display_is_accepted_for', CDM_DATAPORTAL_DISPLAY_IS_ACCEPTED_FOR));

  if(variable_get('cdm_dataportal_display_is_accepted_for', CDM_DATAPORTAL_DISPLAY_IS_ACCEPTED_FOR)){

    $out .= theme('cdm_acceptedFor', 'page_general');

  }

  // --- PAGE PART: DESCRIPTION --- //

  if($page_part == 'description' || $page_part == 'all'){

    $featureTree = cdm_ws_get(CDM_WS_FEATURETREE, variable_get(CDM_DATAPORTAL_DEFAULT_FEATURETREE_UUID, UUID_DEFAULT_FEATURETREE));

        $markerTypesEmpty = array();

  $markerTypesEmpty['markerTypes'] = '';

    $taxonDescriptions = cdm_ws_get(CDM_WS_PORTAL_TAXON_DESCRIPTIONS, $taxon->uuid, queryString($markerTypesEmpty)); //retrieve all description for the taxon

	$nonStructuredDescriptions = array();

    if($taxonDescriptions != null){

      foreach ($taxonDescriptions as $taxonDescription) {

        // check if structured description

        $hasStructuredData = cdm_ws_get(CDM_WS_DESCRIPTION_HAS_STRUCTRURED_DATA, $taxonDescription->uuid);

        $hasStructuredData = $hasStructuredData->Boolean == 'true';

        if($hasStructuredData){

          $structured_description_featuretree_uuid = variable_get(CDM_DATAPORTAL_STRUCTURED_DESCRIPTION_FEATURETREE_UUID, false);

          $naturallanguage_textData = cdm_ws_get(CDM_WS_DESCRIPTION_NATURALLANGUAGE_DESCRIPTION, array($taxonDescription->uuid, $structured_description_featuretree_uuid));

          //$out .= print_r($naturallanguage_textData);

          if(!$naturallanguage_textData){

            drupal_set_message('The \'FeatureTree\' for the generation of natural language representations is not configured correctly, please select a \'FeatureTree\' in the '.l('CDM Dataportal Settings', 'admin/settings/cdm_dataportal/layout/taxon'), 'warning');

          }

          $taxonDescription->elements = null;

          $taxonDescription->elements = array($naturallanguage_textData);

        }

        $nonStructuredDescriptions[] = $taxonDescription;

      }

      $taxonDescriptions = null; // release memory

    }

    $mergedTrees = cdm_ws_descriptions_by_featuretree($featureTree, $nonStructuredDescriptions, variable_get('cdm_dataportal_descriptions_separated', FALSE));

    $out .= '<div id="general">';

    $out .= theme('cdm_taxon_page_profile', $taxon, $mergedTrees, $media, $hideImages);

    $out .= '</div>';

  }

  // --- PAGE PART: IMAGES --- //

  if(!$hideImages && $page_part == 'images' || $page_part == 'all'){

    $out .= '<div id="images">';

    if($page_part == 'all'){

      $out .= '<h2>'.t('Images').'</h2>';

    }

    // get the image gallery as configured by the admin

    $taxon_image_gallery = call_user_func_array( 'taxon_image_gallery_' . variable_get('image_gallery_viewer', 'default'),

         array($taxon, $media));

    $out .= $taxon_image_gallery;

    $out .= '</div>';

  }

  // --- PAGE PART: SYNONYMY --- //

  if($page_part == 'synonymy' || $page_part == 'all'){

    $out .= '<div id="synonymy">';

    if($page_part == 'all'){

      $out .= '<h2>'.t('Synonymy').'</h2>';

    }

    $addAcceptedTaxon = variable_get('cdm_dataportal_nomref_in_title', CDM_DATAPORTAL_NOMREF_IN_TITLE);

    $out .= theme('cdm_taxon_page_synonymy', $taxon, $addAcceptedTaxon);

    $out .= '</div>';

  }

  // --- PAGE PART: SPECIMENS --- //

  if($specimensOrObersvationsCount > 0 && ($page_part == 'specimens' || $page_part == 'all') ){

    $out .= '<div id="specimens">';

    if($page_part == 'all'){

      $out .= '<h2>'.t('Specimens').'</h2>';

    }

    $out .= theme('cdm_taxon_page_specimens', $taxon);

    $out .= '</div>';

  }

  // --- PAGE PART: KEYS --- //

  if($identificationKeyCount > 0 && ($page_part == 'keys' || $page_part == 'all') ){

    $out .= '<div id="keys">';

        if($page_part == 'all'){

      $out .= '<h2>'.t('Keys').'</h2>';

    }

    $out .= theme('cdm_block_IdentificationKeys', $taxon->uuid);

    $out .= '</div>';

  }

  return $out;

}

/**

 * Outputs all descriptive data and shows the preferred picture of the

 * accepted taxon.

 *

 */

function theme_cdm_taxon_page_profile($taxon, $mergedTrees, $media = null, $hideImages = false){

  if( variable_get('cdm_dataportal_show_default_image', false) && !$hideImages){

    // preferred image

    // hardcoded for testing;

    $defaultRepresentationPart = false;

    $defaultRepresentationPart->width = 184;

    $defaultRepresentationPart->height = 144;

    $defaultRepresentationPart->uri = drupal_get_path('theme', 'palmweb_2').'/images/no_picture.png';

    // preferred image size 184px × 144

    $imageMaxExtend = 184;

    $out .= '<div id="taxonProfileImage">'.$defaultRepresentationPart->uri.theme('cdm_preferredImage', $media, $defaultRepresentationPart, $imageMaxExtend).'</div>';

  }

  // description TOC

  $out .= theme('cdm_featureTreeTOCs', $mergedTrees);

  // description

  $out .= theme('cdm_featureTrees', $mergedTrees, $taxon);

  return $out;

}

function theme_cdm_taxon_page_specimens($taxon){

  RenderHints::pushToRenderStack('taxon_page_specimens');

  $specimensOrObersvations = cdm_ws_get(CDM_WS_TAXON, array($taxon->uuid, 'specimensOrObersvations') );

  //collect media (fieldObjectMedia, derivedUnitMedia) and add as fields

   foreach($specimensOrObersvations as &$occurrence) {

      $occurrence->_fieldObjectMedia = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array($occurrence->uuid, 'fieldObjectMedia') );

      $occurrence->_derivedUnitMedia = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array($occurrence->uuid, 'derivedUnitMedia') );

      //	  	$derivedUnitFacde = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array($descriptionElement->associatedSpecimenOrObservation->uuid) );

      //	  	$descriptionElement->_titleCache = $derivedUnitFacde->titleCache;

  }

  if(count($specimensOrObersvations) > 0){

    $occurrenceQuery = cdm_ws_get(CDM_WS_GEOSERVICE_OCCURRENCEMAP, $taxon->uuid);

    $occurrenceQuery = $occurrenceQuery->String;

    if(variable_get('cdm_dataportal_map_openlayers', 1)){

      $out .= get_openlayers_map(

        variable_get('cdm_dataportal_geoservice_display_width', false),

        variable_get('cdm_dataportal_geoservice_bounding_box', false),

        $occurrenceQuery,

        null,

        $legendFormatQueryStr,

        variable_get('cdm_dataportal_geoservice_map_caption', '')

      );

    } else {

      //get_image_map($width, $occurrenceQuery = false, $distributionQuery = false, $legendFormatQuery = false, $map_caption = false )

      $out .= get_image_map(

        variable_get('cdm_dataportal_geoservice_display_width', false),

        variable_get('cdm_dataportal_geoservice_bounding_box', false),

        $occurrenceQuery,

        null,

        $legendFormatQueryStr,

        variable_get('cdm_dataportal_geoservice_map_caption', '')

      );

    }

  }

  if($specimensOrObersvations){

    $out_specimenList = '<table class="specimens">';

    $i = 1;

    foreach($specimensOrObersvations as $specimensOrObersvation) {

      $i++;

        $mediaList = array();

        if(is_array($specimensOrObersvation->_fieldObjectMedia)){

          $mediaList = array_merge($mediaList, $specimensOrObersvation->_fieldObjectMedia);

        }

        if(is_array($specimensOrObersvation->_derivedUnitMedia)){

          $mediaList = array_merge($mediaList, $specimensOrObersvation->_derivedUnitMedia);

        }

        // --- render the title cache

        $out_row = '<tr class="descriptionElement descriptionElement_IndividualsAssociation '.($i%2?'odd':'even').'">';

        if($specimensOrObersvation->class != 'FieldObservation'){

          $label_html = cdm_dynabox($specimensOrObersvation->titleCache,

            cdm_compose_url('portal/'.CDM_WS_DERIVEDUNIT_FACADE, array($specimensOrObersvation->uuid)),

            'cdm_derivedUnitFacade',

            'Click for details',

            array('div', 'div'));

        } else {

          $label_html = $specimensOrObersvation->titleCache;

        }

        $out_row .= '<td>' . $label_html . '</td>';

        // --- render associated media

        if(count($mediaList) > 0){

          $gallery_settings = getGallerySettings(CDM_DATAPORTAL_SPECIMEN_GALLERY_NAME);

          $gallery_name =  $specimensOrObersvation->uuid;

          $captionElements = array('#uri'=>t('open media'));

          $gallery_html = theme(

              'cdm_media_gallerie',

              $mediaList,

              $gallery_name ,

              $gallery_settings['cdm_dataportal_media_maxextend'],

              $gallery_settings['cdm_dataportal_media_cols'],

              $gallery_settings['cdm_dataportal_media_maxRows'],

              $captionElements, 'LIGHTBOX', null, null);

        } else {

          $gallery_html = '';

        }

        $out_row .= '<td>'.$gallery_html.'</td></tr>';

        $out_specimenList .= $out_row;

    }

    $out_specimenList .= '</table>';

  }

  $out .= $out_specimenList;

  RenderHints::popFromRenderStack();

  return $out;

}

function specimens_search_form() {

  //form select options

  $form['specimens_search_options'] = array(

    '#type' => 'value',

    '#value' => array(t('No sort'), t('Name'), t('CatalogNumber'), t('Gallery'))

  );

  //the form

  $form['specimens_search'] = array(

    '#title' => t('Speciments sort'),

    '#type' => 'fieldset',

    '#description' => t('Select your sort criteria.'),

    '#collapsible' => TRUE,

    '#collapsed' => FALSE

  );

  //criteria

  $form['specimens_search']['first_criteria'] = array(

    '#title' => t('First criteria'),

    '#type' => 'select',

    '#options' => $form['specimens_search_options']['#value']

  );

  $form['specimens_search']['second_criteria'] = array(

    '#title' => t('Second criteria'),

    '#type' => 'select',

    '#options' => $form['specimens_search_options']['#value']

  );

  $form['specimens_search']['third_criteria'] = array(

    '#title' => t('Third criteria'),

    '#type' => 'select',

    '#options' => $form['specimens_search_options']['#value']

  );

  //submit button

  $form['specimens_search']['submit'] = array(

    '#type' => 'submit',

    '#value' => t('Sort')

  );

  /*

  //from properties

  $form['#method'] = 'post';

  $form['#action'] = 'http://example.com/?q=foo/bar';

  $form['#attributes'] = array(

    'enctype' => 'multipart/form-data',

    'target' => 'name_of_target_frame'

  );

  $form['#prefix'] = '<div class="my-form-class">';

  $form['#suffix'] = '</div>';

  */

  //returning value

  return $form;

}

/**

 * Show whole synonymy for the accepted taxon. Synonymy list is headed by the complete scientific name

 * of the accepted taxon with nomenclatural reference.

 *

 */

function theme_cdm_taxon_page_synonymy($taxon, $addAcceptedTaxon){

  RenderHints::pushToRenderStack('taxon_page_synonymy');

  $synomymie = cdm_ws_get(CDM_WS_PORTAL_TAXON_SYNONYMY, $taxon->uuid);

  $skip = array(UUID_BASIONYM);

  //render accepted taxon

  if($addAcceptedTaxon){

    if(isset($taxon->name->nomenclaturalReference)){

      $referenceUri = url(path_to_reference($taxon->name->nomenclaturalReference->uuid));

    }

    $accepted_name = '<span class="accepted-name">';

    $accepted_name .= theme('cdm_taxonName', $taxon->name, null, $referenceUri);

    $accepted_name .= '</span>';

    $special_annotations_array = array();

    $special_annotations_array[] = $taxon->name;

    $special_annotations_array[] = $taxon;

    $accepted_name .= theme('cdm_annotations_as_footnotekeys',

          $special_annotations_array,

          RenderHints::getRenderPath() . '-annotations');

          RenderHints::setFootnoteListKey(RenderHints::getRenderPath() . '-annotations');

  }

  //render homotypic synonymy group

  $hasHomotypicSynonyms = isset($synomymie->homotypicSynonymsByHomotypicGroup[0]->name->uuid);

  if($accepted_name){

    $out .= $accepted_name;

  }

  if (!$hasHomotypicSynonyms){

    //show typeDesignations even if the homotypic synonymy group is empty

    $typeDesignations = cdm_ws_get(CDM_WS_PORTAL_TAXON_NAMETYPEDESIGNATIONS, $taxon->uuid);

    if($typeDesignations){

      $out .= theme('cdm_typedesignations', $typeDesignations);

    }

    if($typeDesignations || $accepted_name){

      // add empty list for coherent layout

     $out .= '<ul class="homotypicSynonyms">' . '</ul>';

    }

  } else {

    // render the homotypicSynonymyGroup including the type information

    $out .= theme('cdm_homotypicSynonymyGroup', $synomymie->homotypicSynonymsByHomotypicGroup, $taxon->uuid);

  }

  //render accepted taxon heterotypic synonymy groups

  if($synomymie->heterotypicSynonymyGroups) {

    foreach($synomymie->heterotypicSynonymyGroups as $homotypicalGroup){

      $out .= theme('cdm_heterotypicSynonymyGroup', $homotypicalGroup);

    }

  }

  //render taxon relationships

  if(variable_get(CDM_DATAPORTAL_DISPLAY_TAXON_RELATIONSHIPS, CDM_DATAPORTAL_DISPLAY_TAXON_RELATIONSHIPS_DEFAULT)){

    $taxonRelationships = cdm_ws_get(CDM_WS_PORTAL_TAXON_RELATIONS, $taxon->uuid);

    $out .= theme('cdm_taxonRelationships', $taxonRelationships, $taxon);

  }

  //render name relationships

  $name_rels_to_show = variable_get('name_relationships_to_show', null);

  $skip = array();

  if($name_rels_to_show){

    foreach ($name_rels_to_show as $key => $value){

      if ($value === 0){

        $skip[] = $key;

      }

    }

    if (sizeof($name_rels_to_show) != sizeof($skip)){

      $nameRelationships = cdm_ws_get(CDM_WS_PORTAL_TAXON_TO_NAMERELATIONS, $taxon->uuid);

      $out .= theme('cdm_nameRelationships', $nameRelationships, $skip);

    }

  }

  //render the annontations text for the accepted taxa

  if ($addAcceptedTaxon){

    $out .= theme('cdm_footnotes', RenderHints::getRenderPath() . '-annotations', 'li');

  }

  RenderHints::popFromRenderStack();

  return $out;

}

/**

 * TODO Implementation of Hook taxon_image_gallery()

 *

 * @param unknown_type $taxon

 * @param unknown_type $media

 * @return unknown_type

 */

function taxon_image_gallery_default($taxon, $media){

  $hasImages = isset($media[0]);

  if($hasImages){

    //

    $maxExtend = 150;

    $cols = 3;

    $maxRows = false;

    $alternativeMediaUri = null;

    $captionElements = array('title', 'rights', '#uri'=>t('open Image'));

    $gallery_name = $taxon->uuid;

    $mediaLinkType = 'LIGHTBOX';

    //$gallery_settings = getGallerySettings(CDM_DATAPORTAL_MEDIA_GALLERY_NAME);

    $gallery_settings = getGallerySettings(CDM_DATAPORTAL_TAXON_MEDIA_GALLERY_NAME_TAB);

    $out = '<div class="image-gallerie">';

    $out .= theme('cdm_media_gallerie',

      $media,

      $gallery_name,

      $gallery_settings['cdm_dataportal_media_maxextend'],

      $gallery_settings['cdm_dataportal_media_cols'],

      0, // ignore maxrows settings

      $captionElements,

      $mediaLinkType,

      null,

      null,

      $gallery_settings['cdm_dataportal_show_thumbnail_captions']);

      $out .= '</div>';

  }else{

    $out = 'No images available.';

  }

  return $out;

}

/**

 * TODO Implementation of Hook taxon_image_gallery()

 *

 * @param unknown_type $taxon

 * @param unknown_type $media

 * @return unknown_type

 */

function taxon_image_gallery_fsi($taxon, $media){

  $flashLink = isset($media[0]);

  if($flashLink){

    if(module_exists("fsi_gallery")){

    	$out = theme("fsi_gallery", $taxon, $media );

    } else {

    	$message = t('In order to use the FSI gallery you must enable the according ') . l(t("module"), "admin/build/modules");

    	drupal_set_message($message, "error");

    	$out = '<h3>' . $message . '</h3>';

    }

  }else{

    $out = 'No images available.';

  }

  return $out;

}

/**

 * Show a reference in it's atomized form

 */

function theme_cdm_reference_page($referenceTO){

  /*

   if($referenceTO->titleCache) {

    drupal_set_title($referenceTO->titleCache);

    } else {

    drupal_set_title($referenceTO->fullCitation);

    }

    */

  $field_order = array(

    "title",

  //"titleCache",

  //"citation",

    "authorTeam",

    "editor",

    "publisher",

    "placePublished",

    "datePublished",

    "year",

    "edition",      // class Book

    "volume",       // class Article

    "seriesPart",

    "inReference",

  //"inJournal",     // class Article

  //"inBook",        // class BookSection

    "nomRefBase",    // class BookSection, Book, Article

  //"inProceedings", // class InProceedings

    "pages",         // class Article

    "series",        // class Article, PrintSeries

    "school",        // class Thesis

    "institution",   // class Report

    "organization",  // class Proceedings

    "nextVersion",

    "previousVersion",

    "isbn",         // class Book

    "issn",         // class Journal

    "uri",

  );

  /*

   $table_rows = array();

   foreach($field_order as $fieldname){

    if(isset($referenceTO->$fieldname)){

    if($fieldname == "datePublished") {

    $partial = $referenceTO->$fieldname;

    $datePublished = '';

    if($partial->start){

    //var_dump ($partial->start);

    $datePublishedYear = substr($partial->start, 0, 4);

    $datePublishedMonth = substr($partial->start, 5, 2);

    if (!(preg_match('#[0-9]#',$datePublishedMonth))){

    $datePublishedMonth = '00';

    }

    $datePublishedDay = substr($partial->start, 7, 2);

    if (!(preg_match('#[0-9]#',$datePublishedDay))){

    $datePublishedDay = '00';

    }

    $datePublished = $datePublishedYear.'-'.$datePublishedMonth.'-'.$datePublishedDay;

    }

    if($partial->end){

    $datePublished = (strlen($datePublished) > 0 ? ' '.t('to').' ' : '').substr($partial->end, 0, 4).'-'.substr($partial->end, 4, 2).'-'.substr($partial->end, 6, 2);

    }

    $table_rows[] = array(t(ucfirst(strtolower($fieldname))), $datePublished);

    //$datePublished = array(t(ucfirst(strtolower($fieldname))), $datePublished);

    } else if(is_object($referenceTO->$fieldname)){

    if ($fieldname == "authorTeam"){

    $dump = $referenceTO->$fieldname;

    $teammembers = "teamMembers";

    $team = $dump->$teammembers;

    $nameArray = array();

    foreach($team as $member){

    if (strlen($member->lastname)> 0){

    $nname = $member->lastname;

    $name = $nname;

    if (strlen($member->firstname)> 0){

    $vname = $member->firstname;

    $name =$vname." ". $nname;

    }

    $nameArray[] =$name;

    }else{

    if (strlen($member->titleCache)> 0){

    $nameArray[] = $member->titleCache;

    }

    }

    }

    $names = join($nameArray, ", ");

    }else if ($fieldname == "inReference"){

    $type = $referenceTO ->$fieldname-> type;

    $names = $referenceTO-> $fieldname-> titleCache;

    switch ($type) {

    case "Book":

    $fieldname = "in book";

    break;

    case "Journal":

    $fieldname = "in journal";

    break;

    case "Proceedings":

    $fieldname = "in proceedings";

    break;

    }

    }else{

    $names = $referenceTO->$fieldname-> titleCache;

    }

    $table_rows[] = array(t(ucfirst(strtolower($fieldname))), $names);

    //$name = array(t(ucfirst(strtolower($fieldname))), $names);

    } else {

    $table_rows[] = array(t(ucfirst(strtolower($fieldname))), $referenceTO->$fieldname);

    //$name = array(t(ucfirst(strtolower($fieldname))), $referenceTO->$fieldname);

    }

    }

    }

    */

  //select the type of the reference and find the in Reference attribute

  $referenceData = array(

    "title" => NULL,

  //"titleCache",

  //"citation",

    "authorTeam" => NULL,

    "editor" => NULL,

    "publisher" => NULL,

    "placePublished" => NULL,

    "datePublished" => NULL,

    "year" => NULL,

    "edition" => NULL,      // class Book

    "volume" => NULL,       // class Article

    "seriesPart" => NULL,

    "inReference" => NULL,

  //"inJournal",     // class Article

  //"inBook",        // class BookSection

    "nomRefBase" => NULL,    // class BookSection, Book, Article

  //"inProceedings", // class InProceedings

    "pages" => NULL,         // class Article

    "series" => NULL,        // class Article, PrintSeries

    "school" => NULL,        // class Thesis

    "institution" => NULL,   // class Report

    "organization" => NULL,  // class Proceedings

    "nextVersion" => NULL,

    "previousVersion" => NULL,

    "isbn" => NULL,         // class Book

    "issn" => NULL,         // class Journal

    "uri" => NULL,

  );

  foreach($field_order as $fieldname){

    if(isset($referenceTO->$fieldname)){

      switch($fieldname){

        case "datePublished":

          $partial = $referenceTO->$fieldname;

          $datePublished = '';

          if($partial->start){

            $datePublishedYear = substr($partial->start, 0, 4);

            $datePublishedMonth = substr($partial->start, 5, 2);

            if (!(preg_match('#[0-9]#',$datePublishedMonth))){

              $datePublishedMonth = '00';

            }

            $datePublishedDay = substr($partial->start, 7, 2);

            if (!(preg_match('#[0-9]#',$datePublishedDay))){

              $datePublishedDay = '00';

            }

            $datePublished = $datePublishedYear.'-'.$datePublishedMonth.'-'.$datePublishedDay;

          }

          if($partial->end){

            $datePublished = (strlen($datePublished) > 0 ? ' '.t('to').' ' : '').substr($partial->end, 0, 4).'-'.substr($partial->end, 4, 2).'-'.substr($partial->end, 6, 2);

          }

          $referenceData[$fieldname] = $datePublishedYear;

          break;

        default:

          if(is_object($referenceTO->$fieldname)){

            if ($fieldname == "authorTeam"){

              $dump = $referenceTO->$fieldname;

              $teammembers = "teamMembers";

              $team = $dump->$teammembers;

              $nameArray = array();

              foreach($team as $member){

                if (strlen($member->lastname)> 0){

                  $nname = $member->lastname;

                  $name = $nname;

                  if (strlen($member->firstname)> 0){

                    $vname = $member->firstname;

                    $name =$vname." ". $nname;

                  }

                  $nameArray[] =$name;

                }else{

                  if (strlen($member->titleCache)> 0){

                    $nameArray[] = $member->titleCache;

                  }

                }

              }

              $names = join($nameArray, ", ");

              $referenceData[$fieldname] = $names;

            }else if ($fieldname == "inReference"){

              $names = $referenceTO->$fieldname->titleCache;

              $referenceData[$fieldname] = $names;

            }else{

              $names = $referenceTO->$fieldname->titleCache;

              $referenceData[$fieldname] = $names;

            }

          }else{

            $referenceData[$fieldname] = $referenceTO->$fieldname;

          }

      }

    }

  }

  $author_team =  cdm_ws_get(CDM_WS_REFERENCE_AUTHORTEAM, $referenceTO->uuid);

  //return "" . ((strlen($referenceData["authorTeam"])>0) ? ($referenceData["authorTeam"] . '. ') : '')

  return "" . ((strlen($author_team->titleCache)>0) ? ($author_team->titleCache . '. ') : '')

  . ((strlen($referenceData["datePublished"])>0) ? ($referenceData["datePublished"] . '. ') : '')

  . ((strlen($referenceData["title"])>0) ? ($referenceData["title"] . '. ') : "")

  . ((strlen($referenceData["placePublished"])>0) ? ($referenceData["placePublished"] . '. ') : '')

  . ((strlen($referenceData["editor"])>0) ? ($referenceData["editor"] . '. ') : '')

  . ((strlen($referenceData["publisher"])>0) ? ($referenceData["publisher"] . '. ') : '')

  . ((strlen($referenceData["inReference"])>0) ? ($referenceData["inReference"] . '. ') : '')

  . ((strlen($referenceData["series"])>0) ? ($referenceData["series"] . '. ') : '')

  . ((strlen($referenceData["volume"])>0) ? ($referenceData["volume"] . '. ') : '')

  . ((strlen($referenceData["pages"])>0) ? ($referenceData["pages"] . '. ') : '')

  . ((strlen($referenceData["isbn"])>0) ? ($referenceData["isbn"] . '. ') : '')

  . ((strlen($referenceData["issn"])>0) ? ($referenceData["issn"] . '. ') : '')

  . ((strlen($referenceData["uri"])>0) ? ($referenceData["uri"] . '. ') : '');

}

function theme_cdm_media_page($media, $mediarepresentation_uuid = false, $partId = false){

  $out = '';

  // determine which reprresentation and which part to show

  $representationIdx = 0;

  if($mediarepresentation_uuid){

    $i = 0;

    foreach($media->representations as $representation) {

      if($representation->uuid == $mediarepresentation_uuid){

        $representationIdx = $i;

      }

      $i++;

    }

  } else {

    $mediarepresentation_uuid = $media->representations[0]->uuid;

  }

  $partIdx  = 0;

  if(!is_numeric($partId)){

    // assuming it is an uuid

    $i = 0;

    foreach($media->representations[$representationIdx]->parts as $part) {

      if($part->uuid == $partId){

        $partIdx = $i;

      }

      $i++;

    }

  } else {

    // assuming it is an index

    $partIdx = $partId;

  }

  $media_metadata = cdm_read_media_metadata($media);

  //$title = $media->titleCache;

  $title = $media_metadata['title'];

  $imageMaxExtend = variable_get('image-page-maxextend', 400);

  if(!$title){

    $title = 'Media '.$media->uuid.'';

  }

  drupal_set_title($title);

  $out .= '<div class="media">';

  //$out .= '<div class="viewer">';

  $out .= theme(cdm_back_to_image_gallery_button);

  $out .= '<div class="viewer">';

  //$out .= theme('cdm_media_gallerie_image', $representation->parts[$partIdx], $imageMaxExtend);

  $out .= theme('cdm_openlayers_image', $media->representations[$representationIdx]->parts[$partIdx], $imageMaxExtend);

  $out .= '</div>';

  // general media metadata

  //$media_metadata = cdm_ws_get(CDM_WS_MEDIA_METADATA, array($media->uuid));

  //vardump("PRINTING MEDIA METADATA");

  //vardump($media_metadata);

  //vardump("PRINTING MEDIA");

  //vardump($media);

  $metadataToPrint = theme('cdm_media_caption', $media);

  $out .= $metadataToPrint;

  //tabs for the different representations

  //ul.secondary

  $out .= '<ul class="primary">';

  foreach($media->representations as $representation){