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<?php
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/**
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* @file
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* Search related functions.
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*/
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/**
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* Returns a Drupal path to a search form for a CDM webservice.
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*
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* For a given CDM webservice end-point, the drupal page path to the
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* according search form is returned.
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* cdm webservice end points are defined in constant variables like:
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* <code>CDM_WS_PORTAL_TAXON_FIND</code> and
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* <code>CDM_WS_PORTAL_TAXON_FINDBY_DESCRIPTIONELEMENT_FULLTEXT</code>
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*
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* @param string $ws_endpoint
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* The cdm webservice endpoint for which to find the search form path.
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*
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* @return string
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* The Drupal path found.
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*/
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function cdm_dataportal_search_form_path_for_ws($ws_endpoint) {
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static $form_ws_map = array(
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CDM_WS_PORTAL_TAXON_FIND => "cdm_dataportal/search",
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CDM_WS_PORTAL_TAXON_FINDBY_DESCRIPTIONELEMENT_FULLTEXT => "cdm_dataportal/search/taxon_by_description",
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);
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return $form_ws_map[$ws_endpoint];
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}
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/**
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* Prepares a form array for a general purpose search form.
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*
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* The form is used for general purpose search functionality in the
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* dataportal. The form returned is populated with all nessecary fields
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* for internal processing and has the textfield element $form['query']
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* which holds the query term.
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* he sub tree array can be extended to contain additional search parameters.
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*
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* @param string $action_path
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* The Drupal path to be put into the action url to which the form will
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* be submitted.
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* @param string $search_webservice
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* The cdm-remote webservice to be used, valid values are defined by
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* the constants: FIXME.
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* @param string $query_field_default_value
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* @param string $query_field_description
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* @param string $process
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* The value for #process, if NULL (default), 'cdm_dataportal_search_process'
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* is used.
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*
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* @return array
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* The prepared form array.
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*/
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function cdm_dataportal_search_form_prepare($action_path, $search_webservice, $query_field_default_value, $query_field_description, $process = NULL) {
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if ($process == NULL) {
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$process = 'cdm_dataportal_search_process';
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}
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$form['#method'] = 'get';
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/*
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$form['#process'] = array(
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$process => array(),
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);
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*/
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$form['#action'] = url($action_path, array(
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'absolute' => TRUE,
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));
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$form['ws'] = array(
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'#type' => 'hidden',
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'#value' => $search_webservice,
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'#name' => 'ws',
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);
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$form['query'] = array(
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'#weight' => 0,
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'#type' => 'textfield',
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'#size' => 68,
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// Comment @WA: this causes the description to display also when hovering over
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// the textfield.
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// I think this should be removed, although it is currently there in
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// D5 portals.
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'#attributes' => array(
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'title' => $query_field_description,
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),
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'#description' => $query_field_description,
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'#value' => $query_field_default_value,
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// '#description' => $query_field_description,
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);
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$form['search'] = array(
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'#weight' => 3,
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'#tree' => TRUE,
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// '#type' => $advancedForm ? 'fieldset': 'hidden',
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'#title' => t('Options'),
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);
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// Clean URL get forms breaks if we don't give it a 'q'.
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if (!(bool) variable_get('clean_url', '0')) {
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$form['search']['q'] = array(
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'#type' => 'hidden',
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'#value' => $action_path,
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'#name' => 'q',
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);
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}
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$form['submit'] = array(
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'#weight' => 5,
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'#type' => 'submit',
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'#name' => '',
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'#value' => t('Search'),
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);
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return $form;
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}
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/**
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* Creates a search form for searching on taxa.
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*
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* If advanced $advancedForm id TRUE the form will offer additinal choices
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*
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* @param unknown_type $form
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* @param unknown_type $form_state
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* @param bool $advancedForm
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* default is FALSE
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* @param bool $classificationSelect
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* set TRUE to offer a classifiaction selector in the form - default is FALSE
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* if only available in the advanced mode
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*
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* @return
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* the form array
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*
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*/
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function cdm_dataportal_search_taxon_form($form, &$form_state, $advancedForm = FALSE, $classificationSelect = TRUE) {
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global $theme_key;
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$tdwg_level_select = (isset($_SESSION['cdm']['search']['tdwg_level_select']) ? $_SESSION['cdm']['search']['tdwg_level_select'] : 2);
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$selected_areas = (isset($_SESSION['cdm']['search']['area']) ? $_SESSION['cdm']['search']['area'] : FALSE);
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$query_field_default_value = (isset($_SESSION['cdm']['search']['query']) ? $_SESSION['cdm']['search']['query'] : '');
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$form = cdm_dataportal_search_form_prepare('cdm_dataportal/search/results/taxon', CDM_WS_PORTAL_TAXON_FIND, $query_field_default_value, t('Enter the name or part of a name you wish to search for. The asterisk character * can always be used as wildcard.'), NULL);
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if (!$advancedForm) {
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$form['query']['#size'] = 20;
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}
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$form['search']['pageSize'] = array(
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'#weight' => -1,
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'#type' => 'hidden',
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'#value' => variable_get('cdm_dataportal_search_items_on_page', 25),
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);
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$form['search']['pageNumber'] = array(
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'#weight' => -1,
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'#type' => 'hidden',
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'#value' => 0,
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);
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if ($advancedForm) {
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// --- ADVANCED SEARCH FORM ---
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//
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// Get presets from settings.
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$preset_doTaxa = variable_get('cdm_search_doTaxa', 1);
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$preset_doSynonyms = variable_get('cdm_search_doSynonyms', 1);
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$preset_doTaxaByCommonNames = variable_get('cdm_search_doTaxaByCommonNames', 0);
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$preset_doMisappliedNames = variable_get('cdm_search_doMisappliedNames', 1);
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$preset_UseDefaults = variable_get('cdm_search_use_default_values', 1);
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$preset_classification_uuid = get_taxonomictree_uuid_selected();
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// Overwrite presets by user choice stored in session.
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if (isset($_SESSION['cdm']['search']) && !$preset_UseDefaults) {
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$preset_doTaxa = (isset($_SESSION['cdm']['search']['doTaxa']) ? 1 : 0);
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$preset_doSynonyms = (isset($_SESSION['cdm']['search']['doSynonyms']) ? 1 : 0);
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$preset_doMisappliedNames = (isset($_SESSION['cdm']['search']['doMisappliedNames']) ? 1 : 0);
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$preset_doTaxaByCommonNames = (isset($_SESSION['cdm']['search']['doTaxaByCommonNames']) ? 1 : 0);
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if (isset($_SESSION['cdm']['search']['tree'])) {
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$preset_classification_uuid = $_SESSION['cdm']['search']['tree'];
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}
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}
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if ($classificationSelect === TRUE) {
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$form['search']['tree'] = array(
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'#title' => t('Classification'),
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'#weight' => 1,
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'#type' => 'select',
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'#default_value' => get_taxonomictree_uuid_selected(),
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'#options' => cdm_get_taxontrees_as_options(TRUE),
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'#description' => t('A filter to limit the search to a specific classification.')
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);
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}
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// General search parameters.
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$form['search']['doTaxa'] = array(
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'#weight' => 2,
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'#type' => 'checkbox',
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'#title' => t('Search for accepted taxa'),
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'#value' => $preset_doTaxa,
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);
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$form['search']['doSynonyms'] = array(
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'#weight' => 3,
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'#type' => 'checkbox',
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'#title' => t('Search for synonyms'),
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'#value' => $preset_doSynonyms,
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);
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$form['search']['doMisappliedNames'] = array(
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'#weight' => 4,
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'#type' => 'checkbox',
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'#title' => t('Search for misapplied names'),
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'#value' => $preset_doMisappliedNames,
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);
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$form['search']['doTaxaByCommonNames'] = array(
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'#weight' => 5,
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'#type' => 'checkbox',
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'#title' => t('Search for common names'),
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'#value' => $preset_doTaxaByCommonNames
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);
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// Geographic Range.
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$form['search']['geographic_range'] = array(
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'#type' => 'fieldset',
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'#weight' => 5,
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'#tree' => TRUE,
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'#title' => t('Geographic range'),
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);
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$form['search']['geographic_range']['tdwg_level_select'] = array(
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'#type' => 'radios',
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'#title' => t('Select a TDWG distribution level and code'),
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'#default_value' => $tdwg_level_select,
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'#options' => array(
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t('TDWG level-1, i.e. a continent'),
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t('TDWG level-2'),
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t('TDWG level-3, i.e. a country'),
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t('TDWG level-4'),
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),
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);
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$tdwg[1] = cdm_ws_get(CDM_WS_TDWG_LEVEL, '1');
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$tdwg[2] = cdm_ws_get(CDM_WS_TDWG_LEVEL, '2');
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$tdwg[3] = cdm_ws_get(CDM_WS_TDWG_LEVEL, '3');
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$tdwg[4] = cdm_ws_get(CDM_WS_TDWG_LEVEL, '4');
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$tdwg_js = '';
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foreach ($tdwg as $key => $tdwg_level) {
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$tdwgOptions = array();
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$tdwgOptionsSelected = array();
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foreach ($tdwg_level as $area) {
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$representation = $area->representations[0];
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$tdwgOptions[$representation->abbreviatedLabel] = $area->representation_L10n;
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if (is_array($selected_areas) && in_array($representation->abbreviatedLabel, $selected_areas)) {
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// $area->uuid;
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$tdwgOptionsSelected[] = $representation->abbreviatedLabel;
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}
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}
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asort($tdwgOptions);
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$form['search']['geographic_range']['tdwg_level_' . $key] = array(
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'#type' => 'select',
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'#title' => t('TDWG level') . ' ' . $key,
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'#default_value' => $tdwgOptionsSelected,
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'#multiple' => TRUE,
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'#options' => $tdwgOptions,
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);
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$tdwg_js .= "$('#edit-search-geographic-range-tdwg-level-$key').parent()" . ($tdwg_level_select + 1 == $key ? '.show()' : '.hide()') . ";\n";
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}
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drupal_add_js(
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"jQuery(document).ready(function($){
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$(\"input[name='search[geographic_range][tdwg_level_select]']\").change(
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function(){
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var selectId = $(\"input[name='search[geographic_range][tdwg_level_select]']:checked\").val();
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var i;
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for(i = 0; i < 4; i++){
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if(selectId == i){
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$('#edit-search-geographic-range-tdwg-level-' + (i + 1) ).parent().fadeIn('slow');
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$('#edit-search-geographic-range-tdwg-level-' + (i + 1)).children().removeAttr('selected');
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} else {
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$('#edit-search-geographic-range-tdwg-level-' + (i + 1)).parent().fadeOut('slow');
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$('#edit-search-geographic-range-tdwg-level-' + (i + 1)).children().removeAttr('selected');
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}
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}
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}
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);
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$tdwg_js
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});",
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array('type' => 'inline'));
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}
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else {
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// --- SIMPLE SEARCH FORM ---
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//
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$preset_doTaxa = variable_get('cdm_search_doTaxa', 1);
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$preset_doSynonyms = variable_get('cdm_search_doSynonyms', 1);
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$preset_doTaxaByCommonNames = variable_get('cdm_search_doTaxaByCommonNames', 0);
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$preset_doMisappliedNames = variable_get('cdm_search_doMisappliedNames', 1);
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$preset_UseDefaults = variable_get('cdm_search_use_default_values', 1);
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// Overwrite presets by user choice stored in session.
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if (isset($_SESSION['cdm']['search']) && !$preset_UseDefaults) {
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$preset_doMisappliedNames = (isset($_SESSION['cdm']['search']['doMisappliedNames']) ? 1 : 0);
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}
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$form['search']['doTaxa'] = array(
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'#weight' => -2,
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'#type' => 'hidden',
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'#value' => $preset_doTaxa,
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);
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$form['search']['doSynonyms'] = array(
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'#weight' => -3,
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'#type' => 'hidden',
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'#value' => $preset_doSynonyms,
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);
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$form['search']['doMisappliedNames'] = array(
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'#weight' => -4,
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'#type' => 'checkbox',
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'#title' => t('Misapplied names'),
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'#value' => $preset_doMisappliedNames,
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);
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$form['search']['doTaxaByCommonNames'] = array(
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'#weight' => -5,
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'#type' => 'hidden',
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'#value' => $preset_doTaxaByCommonNames,
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);
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}
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return $form;
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}
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/**
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* @todo Please document this function.
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* @see http://drupal.org/node/1354
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*/
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function cdm_dataportal_search_taxon_form_advanced($form, &$form_state) {
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return cdm_dataportal_search_taxon_form($form, $form_state, TRUE);
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}
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/**
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* Search form for the searching taxa by the findByDescriptionElementFullText
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* rest service.
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*/
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function cdm_dataportal_search_taxon_by_description_form() {
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$query_field_default_value = (isset($_SESSION['cdm']['search']['query']) ? $_SESSION['cdm']['search']['query'] : '');
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$form = cdm_dataportal_search_form_prepare(
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'cdm_dataportal/search/results/taxon',
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CDM_WS_PORTAL_TAXON_FINDBY_DESCRIPTIONELEMENT_FULLTEXT,
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$query_field_default_value,
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t("Enter the text you wish to search for. The asterisk character * can be
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used as wildcard. Terms can be combined with 'AND'. To search for a
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full phrase enclose the terms in parentheses. For more syntactial
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options please refer to the !link.", array(
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'!link' => l(t('Apache Lucene - Query Parser Syntax'), 'http://lucene.apache.org/core/old_versioned_docs/versions/2_9_1/queryparsersyntax.html', array(
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'attributes' => array('absolute' => TRUE, 'html' => TRUE))),
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)),
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NULL
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);
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$form['search']['tree'] = array(
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'#weight' => -1,
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'#type' => 'hidden',
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'#value' => get_taxonomictree_uuid_selected(),
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);
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$form['search']['hl'] = array(
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'#weight' => -1,
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'#type' => 'hidden',
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'#value' => 1,
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);
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// Only avaiable to admins:
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if (!isset($_SESSION['cdm']['search']['clazz'])) {
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$_SESSION['cdm']['search']['clazz'] = '';
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}
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if (module_exists("user") && user_access('administer')) {
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$form['search']['clazz'] = array(
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'#type' => 'select',
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'#title' => t('Limit to DescriptionElement type'),
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'#default_value' => $_SESSION['cdm']['search']['clazz'],
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'#options' => cdm_descriptionElementTypes_as_option(TRUE),
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);
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}
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/*
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see cdm_get_featureTrees_as_options() ... $treeRepresentation =
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$featureTree->titleCache; if(is_array($featureTree->root->children) &&
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count($featureTree->root->children) > 0){ // render the hierarchic tree
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structure $treeDetails = '<div class="featuretree_structure">'
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//.cdm_featureTree_elements_toString($featureTree->root)
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.theme('featureTree_hierarchy', $featureTree->uuid) .'</div>'; $form =
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array(); $form['featureTree-'.$featureTree->uuid] = array( '#type' =>
|
392
|
'fieldset', '#title' => t('Show details'), '#collapsible' => TRUE,
|
393
|
'#collapsed' => TRUE, );
|
394
|
$form['featureTree-'.$featureTree->uuid]['details'] =
|
395
|
array('#value'=>$treeDetails); $treeRepresentation .= drupal_render($form);
|
396
|
*/
|
397
|
|
398
|
$profile_featureTree = get_profile_featureTree();
|
399
|
$feature_options = _featureTree_nodes_as_feature_options($profile_featureTree->root);
|
400
|
if (isset($_SESSION['cdm']['search']['features'])) {
|
401
|
$form['search']['features'] = array(
|
402
|
'#type' => 'checkboxes',
|
403
|
'#title' => t('Limit to selected features'),
|
404
|
'#default_value' => $_SESSION['cdm']['search']['features'],
|
405
|
'#options' => $feature_options,
|
406
|
);
|
407
|
}
|
408
|
else {
|
409
|
$form['search']['features'] = array(
|
410
|
'#type' => 'checkboxes',
|
411
|
'#title' => t('Limit to selected features'),
|
412
|
'#options' => $feature_options,
|
413
|
);
|
414
|
}
|
415
|
return $form;
|
416
|
}
|
417
|
|
418
|
/**
|
419
|
* Reads the query parameters from $_REQUEST and modifies and adds additional query parameters if nessecary.
|
420
|
*
|
421
|
* - Filters $_REQUEST by a list of valid request parameters
|
422
|
* - modifies geographic_range parameters
|
423
|
* - adds taxon tree uuid if it is missing and if it should not be
|
424
|
* ignored (parameter value = 'IGNORE')
|
425
|
* - and more
|
426
|
*
|
427
|
*
|
428
|
* @return
|
429
|
* the processed request parameters submitted by the search form and
|
430
|
* also stores them in $_SESSION['cdm']['search']
|
431
|
*/
|
432
|
function cdm_dataportal_search_form_request() {
|
433
|
|
434
|
$form_params = array();
|
435
|
|
436
|
if (isset($_REQUEST['search']) && is_array($_REQUEST['search'])) {
|
437
|
array_deep_copy($_REQUEST['search'], $form_params);
|
438
|
}
|
439
|
|
440
|
if (isset($_REQUEST['pager']) && is_array($_REQUEST['pager'])) {
|
441
|
$form_params = array_merge($form_params, $_REQUEST['pager']);
|
442
|
}
|
443
|
|
444
|
$form_params['query'] = trim($_REQUEST['query']);
|
445
|
|
446
|
// --- handle geographic range
|
447
|
// Split of geographic range.
|
448
|
if (isset($_REQUEST['search']['geographic_range']) && is_array($_REQUEST['search']['geographic_range'])) {
|
449
|
$geographicRange = $_REQUEST['search']['geographic_range'];
|
450
|
// Remove from form.
|
451
|
unset($form_params['geographic_range']);
|
452
|
$form_params['tdwg_level_select'] = $geographicRange['tdwg_level_select'];
|
453
|
for ($i = 1; $i < 5; $i++) {
|
454
|
if (isset($geographicRange['tdwg_level_' . $i])) {
|
455
|
$form_params['area'] = $geographicRange['tdwg_level_' . $i];
|
456
|
}
|
457
|
}
|
458
|
}
|
459
|
|
460
|
// simple search will not submit a 'tree' query parameter, so we add it here from
|
461
|
// what is stored in the session unless 'simple_search_ignore_classification'
|
462
|
// is checked in the settings
|
463
|
if (!isset($form_params['tree']) && !variable_get('simple_search_ignore_classification', 1)) {
|
464
|
$form_params['tree'] = get_taxonomictree_uuid_selected();
|
465
|
}
|
466
|
// if the 'NONE' classification has been chosen (adanced search) delete the tree information
|
467
|
// to avoid unknown uuid exceptions in the cdm service
|
468
|
if (isset($form_params['tree']) && ($form_params['tree'] == 'NONE' || ! is_uuid($form_params['tree']))) {
|
469
|
// $form_params['ignore_classification'] = TRUE;
|
470
|
unset($form_params['tree']);
|
471
|
}
|
472
|
// else {
|
473
|
// $form_params['ignore_classification'] = NULL;
|
474
|
// }
|
475
|
|
476
|
// Store in session.
|
477
|
$_SESSION['cdm']['search'] = $form_params;
|
478
|
|
479
|
return $form_params;
|
480
|
}
|
481
|
|
482
|
/**
|
483
|
* Provides the classification the last search has been run on if any.
|
484
|
*
|
485
|
* This function should only be used after the cdm_dataportal_search_execute() handler has been run,
|
486
|
* otherwise it will return the infomation from the last search executed. The information is retrieved from
|
487
|
* the $_SESSION variable: $_SESSION['cdm']['search']['tree']
|
488
|
*
|
489
|
* @return
|
490
|
* the CDM classification instance which has been used a filter for the last processed search
|
491
|
* or NULL, it it was on all classifications
|
492
|
*/
|
493
|
function cdm_dataportal_searched_in_classification() {
|
494
|
|
495
|
$classification = &drupal_static(__FUNCTION__);
|
496
|
|
497
|
if (!isset($classification)) {
|
498
|
if (isset($_SESSION['cdm']['search']['tree'])) {
|
499
|
$classification = cdm_ws_get(CDM_WS_PORTAL_TAXONOMY, ($_SESSION['cdm']['search']['tree']));
|
500
|
} else {
|
501
|
$classification = FALSE;
|
502
|
}
|
503
|
}
|
504
|
|
505
|
return $classification !== FALSE ? $classification : NULL;
|
506
|
}
|
507
|
|
508
|
/**
|
509
|
* Removes Drupal internal form elements from query.
|
510
|
*/
|
511
|
function cdm_dataportal_search_process($form, &$form_state) {
|
512
|
unset($form['form_id']);
|
513
|
unset($form['form_token']);
|
514
|
return $form;
|
515
|
}
|
516
|
|
517
|
/**
|
518
|
* Sends a search request at the cdm web server.
|
519
|
*
|
520
|
* The parameters to build the query are taken obtained by calling
|
521
|
* cdm_dataportal_search_form_request() which reads the query parameters
|
522
|
* from $_REQUEST and add additional query parameters if nessecary.
|
523
|
*
|
524
|
* @see cdm_dataportal_search_form_request()
|
525
|
*
|
526
|
*/
|
527
|
function cdm_dataportal_search_execute() {
|
528
|
|
529
|
// Store as last search in session.
|
530
|
$_SESSION['cdm']['last_search'] = $_SERVER['REQUEST_URI'];
|
531
|
|
532
|
// Validate the search webservice parameter:
|
533
|
if (!isset($_REQUEST['ws'])) {// Check is ws.
|
534
|
// Endpoint is unknown.
|
535
|
drupal_set_message(t('webservice parameter \'ws\' missing'), 'warning');
|
536
|
return NULL;
|
537
|
}
|
538
|
if (!cdm_dataportal_search_form_path_for_ws($_REQUEST['ws'])) {// Check is ws.
|
539
|
// Endpoint is unknown.
|
540
|
drupal_set_message(t('Invalid search webservice parameter \'ws\' given'), 'warning');
|
541
|
return NULL;
|
542
|
}
|
543
|
|
544
|
// read the query parameters from $_REQUEST and add additional query parameters if nessecary.
|
545
|
$request_params = cdm_dataportal_search_form_request();
|
546
|
|
547
|
$taxonPager = cdm_ws_get($_REQUEST['ws'], NULL, queryString($request_params));
|
548
|
|
549
|
return $taxonPager;
|
550
|
}
|