Revision 991ae630
Added by Andreas Kohlbecker over 2 years ago
| modules/cdm_dataportal/includes/name.inc | ||
|---|---|---|
| 626 | 626 |
); |
| 627 | 627 |
|
| 628 | 628 |
// name |
| 629 |
$name_relations = null; |
|
| 629 | 630 |
if($registration_dto->nameRef){
|
| 630 | 631 |
$name = cdm_ws_get(CDM_WS_PORTAL_NAME, $registration_dto->nameRef->uuid); |
| 631 | 632 |
cdm_load_tagged_full_title($name); |
| 632 | 633 |
$render_array['nomenclatural_act']['published_name'] = markup_to_render_array('<div class="published-name">' . render_taxon_or_name($name, url(path_to_name($name->uuid))) . '</div>', 0);
|
| 633 | 634 |
$name_relations = cdm_ws_fetch_all(str_replace("$0", $registration_dto->nameRef->uuid, CDM_WS_PORTAL_NAME_NAME_RELATIONS));
|
| 634 |
$render_array['nomenclatural_act']['name_relations'] = compose_name_relationships_list($name_relations, $registration_dto->nameRef->uuid, null); |
|
| 635 |
$render_array['nomenclatural_act']['name_relations']['#weight'] = 10; |
|
| 635 |
// need to create the name relationships later, so that the foot notes are in correct order, see section // name relations |
|
| 636 | 636 |
} else {
|
| 637 | 637 |
// in this case the registration must have a |
| 638 | 638 |
$name = cdm_ws_get(CDM_WS_PORTAL_NAME, $registration_dto->typifiedNameRef->uuid); |
| 639 | 639 |
$render_array['typified_name'] = markup_to_render_array('<p class="typified-name">for ' . render_taxon_or_name($name, url(path_to_name($name->uuid))) . '</p>', 40);
|
| 640 | 640 |
} |
| 641 |
|
|
| 641 | 642 |
// typedesignation in detail |
| 642 | 643 |
if(is_object($registration_dto->orderdTypeDesignationWorkingSets)) {
|
| 643 | 644 |
$field_unit_uuids = array(); |
| ... | ... | |
| 668 | 669 |
drupal_set_message("Unimplemented type: " . $tokens[0], 'error');
|
| 669 | 670 |
} |
| 670 | 671 |
} |
| 671 |
// type designations wich are in this nomenclatural act. |
|
| 672 |
// type designations which are in this nomenclatural act.
|
|
| 672 | 673 |
if (count($name_type_designation_refs) > 0) {
|
| 673 | 674 |
$render_array['nomenclatural_act']['name_type_designations'] = compose_name_type_designations($name_type_designation_refs); |
| 674 | 675 |
$render_array['nomenclatural_act']['name_type_designations']['#prefix'] = '<p class="name_type_designations">'; |
| ... | ... | |
| 683 | 684 |
} |
| 684 | 685 |
} |
| 685 | 686 |
|
| 687 |
// name relations |
|
| 688 |
if($name_relations){
|
|
| 689 |
$render_array['nomenclatural_act']['name_relations'] = compose_name_relationships_list($name_relations, $registration_dto->nameRef->uuid, null); |
|
| 690 |
$render_array['nomenclatural_act']['name_relations']['#weight'] = 10; |
|
| 691 |
} |
|
| 692 |
|
|
| 686 | 693 |
// citation |
| 687 | 694 |
if ($with_citation) {
|
| 688 | 695 |
$render_array['citation'] = markup_to_render_array( |
| ... | ... | |
| 694 | 701 |
$render_array['nomenclatural_act']['#weight'] + 10 ); |
| 695 | 702 |
} |
| 696 | 703 |
|
| 697 |
$render_array['footnotes'] = markup_to_render_array( |
|
| 698 |
theme('cdm_annotation_footnotes', ['footnoteListKey' => RenderHints::getFootnoteListKey() ]),
|
|
| 699 |
12 |
|
| 704 |
$render_array['nomenclatural_act']['footnotes'] = markup_to_render_array(render_cdm_footnotes(), |
|
| 705 |
100 |
|
| 700 | 706 |
); |
| 701 | 707 |
|
| 702 | 708 |
// registration date and office |
| ... | ... | |
| 936 | 942 |
} |
| 937 | 943 |
$out .= ': ' . render_taxon_or_name($name_type_designation->typeName, $link_to_name_page, $referenceUri, TRUE, TRUE); |
| 938 | 944 |
} |
| 945 |
$annotations_and_sources = handle_annotations_and_sources( |
|
| 946 |
$name_type_designation, |
|
| 947 |
typedesignations_annotations_and_sources_config(), |
|
| 948 |
'', |
|
| 949 |
RenderHints::getFootnoteListKey()); |
|
| 950 |
$out .= $annotations_and_sources['foot_note_keys']; |
|
| 939 | 951 |
} |
| 940 | 952 |
} // END NameTypeDesignation |
| 941 | 953 |
|
| ... | ... | |
| 989 | 1001 |
|
| 990 | 1002 |
} |
| 991 | 1003 |
|
| 1004 |
|
|
| 992 | 1005 |
$out .= '<'. $element_tag .' class="' . html_class_attribute_ref($specimen_type_designation) . '">'; |
| 993 | 1006 |
$out .= type_designation_status_label_markup($specimen_type_designation) . $type_citation_markup; |
| 994 | 1007 |
|
| ... | ... | |
| 1003 | 1016 |
if($link_to_specimen_page && isset($derivedUnitFacadeInstance->specimenLabel) && $derivedUnitFacadeInstance->specimenLabel){
|
| 1004 | 1017 |
$specimen_markup = str_replace($derivedUnitFacadeInstance->specimenLabel, l($derivedUnitFacadeInstance->specimenLabel, path_to_specimen($specimen_type_designation->typeSpecimen->uuid)), $specimen_markup); |
| 1005 | 1018 |
} |
| 1019 |
$annotations_and_sources = handle_annotations_and_sources( |
|
| 1020 |
$derivedUnitFacadeInstance, |
|
| 1021 |
typedesignations_annotations_and_sources_config(), |
|
| 1022 |
'', |
|
| 1023 |
RenderHints::getFootnoteListKey() |
|
| 1024 |
); |
|
| 1006 | 1025 |
$out .= ': <span class="' . html_class_attribute_ref($specimen_type_designation->typeSpecimen) . '">' |
| 1007 | 1026 |
. $specimen_markup |
| 1008 | 1027 |
. '</span>'; // . ': ' . theme('cdm_specimen', array('specimenTypeDesignation' => $derivedUnitFacadeInstance));
|
| 1009 | 1028 |
if(!empty($derivedUnitFacadeInstance->preferredStableUri)){
|
| 1010 | 1029 |
$out .= ' ' . l($derivedUnitFacadeInstance->preferredStableUri, $derivedUnitFacadeInstance->preferredStableUri, array('absolute' => true));
|
| 1011 | 1030 |
} |
| 1031 |
$out .= $annotations_and_sources['foot_note_keys']; |
|
| 1012 | 1032 |
} |
| 1013 | 1033 |
|
| 1014 | 1034 |
|
| ... | ... | |
| 1031 | 1051 |
'bibliography_aware' => false |
| 1032 | 1052 |
), |
| 1033 | 1053 |
'', |
| 1034 |
RenderHints::getFootnoteListKey() // passing a defined key to avoid separate annotation footnote key see https://dev.e-taxonomy.eu/redmine/issues/8543 |
|
| 1054 |
RenderHints::getFootnoteListKey() // passing a defined key to avoid a separate annotation footnote key see https://dev.e-taxonomy.eu/redmine/issues/8543
|
|
| 1035 | 1055 |
); |
| 1036 | 1056 |
$encasement = $textual_type_designation->verbatim ? '"' : ''; |
| 1037 | 1057 |
$out .= '<' . $element_tag . ' class="' . html_class_attribute_ref($textual_type_designation) . '">' . type_designation_status_label_markup(null) |
| ... | ... | |
| 1043 | 1063 |
} |
| 1044 | 1064 |
} |
| 1045 | 1065 |
|
| 1046 |
// Footnotes for citations, collection acronym?s.
|
|
| 1066 |
// Footnotes for citations, collection acronyms. |
|
| 1047 | 1067 |
// footnotes should be rendered in the parent element so we |
| 1048 | 1068 |
// are relying on the FootnoteListKey set there |
| 1049 | 1069 |
$_fkey = FootnoteManager::addNewFootnote( |
| ... | ... | |
| 1094 | 1114 |
/** |
| 1095 | 1115 |
* Composes the TypedEntityReference to name type designations passed as associatve array. |
| 1096 | 1116 |
* |
| 1097 |
* @param $type_entity_refs array |
|
| 1117 |
* @param $type_entity_refs_by_status array
|
|
| 1098 | 1118 |
* an associative array of name type type => TypedEntityReference for name type designations as |
| 1099 | 1119 |
* produced by the eu.etaxonomy.cdm.api.service.name.TypeDesignationSetManager |
| 1100 | 1120 |
* |
| 1101 | 1121 |
* @ingroup compose |
| 1102 | 1122 |
*/ |
| 1103 |
function compose_name_type_designations($type_entity_refs){
|
|
| 1123 |
function compose_name_type_designations($type_entity_refs_by_status){
|
|
| 1104 | 1124 |
$render_array = array(); |
| 1105 | 1125 |
$preferredStableUri = ''; |
| 1106 |
foreach($type_entity_refs as $type_status => $name_types){
|
|
| 1107 |
foreach ($name_types as $name_type){
|
|
| 1108 |
$type_designation = cdm_ws_get(CDM_WS_TYPEDESIGNATION, array($name_type->uuid, 'preferredUri')); |
|
| 1126 |
foreach($type_entity_refs_by_status as $type_status => $name_type_entityRefs){
|
|
| 1127 |
foreach ($name_type_entityRefs as $name_type_entity_ref){
|
|
| 1128 |
$type_designation = cdm_ws_get(CDM_WS_TYPEDESIGNATION, array($name_type_entity_ref->uuid, 'preferredUri')); |
|
| 1129 |
$footnote_keys = ''; |
|
| 1130 |
|
|
| 1109 | 1131 |
if(isset($type_designation->typeSpecimen->preferredStableUri) && $type_designation->typeSpecimen->preferredStableUri){
|
| 1110 | 1132 |
$preferredStableUri = $type_designation->typeSpecimen->preferredStableUri; |
| 1111 | 1133 |
} |
| 1112 |
$render_array[] = markup_to_render_array('<div class="name_type_designation ' . html_class_attribute_ref($name_type) . '"><span class="type-status">'. ucfirst($type_status) . "</span>: "
|
|
| 1113 |
. $name_type->label |
|
| 1134 |
// annotations and sources for the $derived_unit_facade_dto |
|
| 1135 |
$annotations_and_sources = handle_annotations_and_sources( |
|
| 1136 |
$name_type_entity_ref, |
|
| 1137 |
typedesignations_annotations_and_sources_config(), |
|
| 1138 |
'', |
|
| 1139 |
RenderHints::getFootnoteListKey() |
|
| 1140 |
); |
|
| 1141 |
|
|
| 1142 |
$render_array[] = markup_to_render_array('<div class="name_type_designation ' . html_class_attribute_ref($name_type_entity_ref) . '"><span class="type-status">'. ucfirst($type_status) . "</span>: "
|
|
| 1143 |
. $name_type_entity_ref->label |
|
| 1114 | 1144 |
. ($preferredStableUri ? " ". l($preferredStableUri, $preferredStableUri) : '') |
| 1145 |
. $annotations_and_sources['foot_note_keys'] |
|
| 1115 | 1146 |
. '</div>'); |
| 1116 | 1147 |
} |
| 1117 | 1148 |
} |
| ... | ... | |
| 1138 | 1169 |
|
| 1139 | 1170 |
$render_array = array(); |
| 1140 | 1171 |
|
| 1141 |
static $annotations_and_sources_config = [ |
|
| 1142 |
'sources_as_content' => TRUE, |
|
| 1143 |
'link_to_name_used_in_source' => FALSE, |
|
| 1144 |
'link_to_reference' => TRUE, |
|
| 1145 |
'add_footnote_keys' => FALSE, |
|
| 1146 |
'bibliography_aware' => FALSE |
|
| 1147 |
]; |
|
| 1148 |
|
|
| 1149 | 1172 |
$type_designation_list = array(); |
| 1150 | 1173 |
uksort($type_entity_refs, "compare_type_designation_status_labels"); |
| 1151 | 1174 |
foreach($type_entity_refs as $type_status => $type_designation_entity_refs){
|
| ... | ... | |
| 1166 | 1189 |
// annotations and sources for the $derived_unit_facade_dto |
| 1167 | 1190 |
$annotations_and_sources = handle_annotations_and_sources( |
| 1168 | 1191 |
$derived_unit_facade_dto, |
| 1169 |
$annotations_and_sources_config,
|
|
| 1192 |
typedesignations_annotations_and_sources_config(),
|
|
| 1170 | 1193 |
'', |
| 1171 |
null
|
|
| 1194 |
RenderHints::getFootnoteListKey()
|
|
| 1172 | 1195 |
); |
| 1173 | 1196 |
$source_citations = $annotations_and_sources['source_references']; |
| 1174 | 1197 |
$foot_note_keys = $annotations_and_sources['foot_note_keys']; |
| ... | ... | |
| 1240 | 1263 |
return $render_array; |
| 1241 | 1264 |
} |
| 1242 | 1265 |
|
| 1266 |
/** |
|
| 1267 |
* Provides the default configuration for typedesignations which |
|
| 1268 |
* are passed to the handle_annotations_and_sources() |
|
| 1269 |
* function: |
|
| 1270 |
* - 'sources_as_content' => TRUE, |
|
| 1271 |
* - 'link_to_name_used_in_source' => FALSE, |
|
| 1272 |
* - 'link_to_reference' => TRUE, |
|
| 1273 |
* - 'add_footnote_keys' => FALSE, |
|
| 1274 |
* - 'bibliography_aware' => FALSE |
|
| 1275 |
* |
|
| 1276 |
* @return array |
|
| 1277 |
*/ |
|
| 1278 |
function typedesignations_annotations_and_sources_config() {
|
|
| 1279 |
static $annotations_and_sources_config = [ |
|
| 1280 |
'sources_as_content' => TRUE, |
|
| 1281 |
'link_to_name_used_in_source' => FALSE, |
|
| 1282 |
'link_to_reference' => TRUE, |
|
| 1283 |
'add_footnote_keys' => FALSE, |
|
| 1284 |
'bibliography_aware' => FALSE |
|
| 1285 |
]; |
|
| 1286 |
return $annotations_and_sources_config; |
|
| 1287 |
} |
|
| 1288 |
|
|
| 1243 | 1289 |
/** |
| 1244 | 1290 |
* @param $name_rel |
| 1245 | 1291 |
* @param $current_name_uuid |
| ... | ... | |
| 1393 | 1439 |
$render_array = compose_name_relationships($name_relations, $name_rel_type_filter, $current_name_uuid, $current_taxon_uuid, $list_prefix, $list_suffix, $item_prefix, $item_suffix); |
| 1394 | 1440 |
|
| 1395 | 1441 |
RenderHints::popFromRenderStack(); |
| 1396 |
$render_array['footnotes'] = markup_to_render_array(theme('cdm_footnotes', array('footnoteListKey' => RenderHints::getFootnoteListKey())));
|
|
| 1397 | 1442 |
if(RenderHints::getFootnoteListKey() == $key) {
|
| 1443 |
$render_array['footnotes'] = markup_to_render_array(theme('cdm_footnotes', array('footnoteListKey' => RenderHints::getFootnoteListKey())));
|
|
| 1398 | 1444 |
RenderHints::clearFootnoteListKey(); |
| 1399 | 1445 |
} |
| 1400 | 1446 |
return $render_array; |
Also available in: Unified diff
ref #8850 annotations for FieldUnits and nameTypeDesignations in registration and name page