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Revision 947ee97b

Added by Andreas Kohlbecker over 3 years ago

fix #9306 filtering designated by reference out for registration list

View differences:

modules/cdm_dataportal/cdm_api/tagged_text.inc
320 320 
}
321 321 

  		




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/**


  		




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 * Extracts from a tagged text array the tagged text for a references which is concatenated with citation


  		




  
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 * Extracts from a tagged text array all tagged text for references which is concatenated with citation


  		




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 * detail separator and citation detail into one single element.


  		




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 *


  		




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 * @param $tagged_text


  		




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 *    The tagged text to operate on


  		




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 * @param string $ref_tag_type


  		




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 *    The tagtype for a secreference is "secReference", but "relSecReference" is also used in case of relationships.


  		




  
  329
  
    
 *    The tag type for a reference is "reference", this is uses as default.


  		




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 * @param bool $replace_with_placeholder


  		




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 *    Indicates the method to add a empty placeholder tagged text alement as relpacement for the extrated tagged text


  		




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 *    elements.


  		




  333
  
  
    
 * @param string $ref_detail_tag_type


  		




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 * @return array


  		




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 */


  		




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function tagged_text_extract_reference(&$tagged_text, $ref_tag_type = "reference", $replace_with_placeholder = false) {


  		




  ......




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  $extracted_tt = array();


  		




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  if (is_array($tagged_text)) {


  		




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    $extract_pos = null;


  		




  341
  
  
    
    for ($i = 0; $i < count($tagged_text); $i++) {


  		




  
  340
  
    
    $tt_legth = count($tagged_text);


  		




  
  341
  
    
    for ($i = 0; $i < $tt_legth; $i++) {


  		




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      if ($tagged_text[$i]->type == $ref_tag_type){


  		




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        if ($i > 0 && $tagged_text[$i - 1]->type == 'separator') {


  		




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          // the reference may be preceeded by a separator in case it is not a in-reference


  		




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          $extracted_tt[] = $tagged_text[$i - 1];


  		




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          unset($tagged_text[$i - 1]);


  		




  347
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        } else {


  		




  348
  
  
    
          // need to add a separator to since the reference tagged text will become the first element


  		




  
  348
  
    
          // need to add a separator since the reference tagged text will become the first element


  		




  349
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          // ant thus will not be preceded by a separator


  		




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          $extracted_tt[] = tagged_text_new('separator', ' ');


  		




  351
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        }


  		




  ......




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        } else {


  		




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          unset($tagged_text[$i]);


  		




  358
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        }


  		




  359
  
  
    
        break;


  		




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      }


  		




  361
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    }


  		




  362
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  }


  		




  ......




  381
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  $extracted_tt = array();


  		




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  if (is_array($tagged_text)) {


  		




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    $extract_pos = null;


  		




  384
  
  
    
    for ($i = 0; $i < count($tagged_text) - 1; $i++) {


  		




  
  383
  
    
    $tt_length = count($tagged_text);


  		




  
  384
  
    
    for ($i = 0; $i < $tt_length - 1; $i++) {


  		




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      if ($tagged_text[$i + 1]->type == $ref_tag_type && $tagged_text[$i]->type == "separator"){


  		




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        $extracted_tt[0] = $tagged_text[$i];


  		




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        $extracted_tt[1] = $tagged_text[$i + 1];


  		












  

    
      modules/cdm_dataportal/includes/name.inc
    
  





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    );


  		




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  }


  		




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  cdm_tagged_text_add_options($registration_dto->summaryTaggedText, $tagged_text_options);


  		




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  $taggged_text_expanded = cdm_tagged_text_expand_entity_references($registration_dto->summaryTaggedText);


  		




  787
  
  
    
  foreach ($taggged_text_expanded  as $tagged_text){


  		




  
  786
  
    
  tagged_text_extract_reference($registration_dto->summaryTaggedText);


  		




  
  787
  
    
  $tagged_text_expanded = cdm_tagged_text_expand_entity_references($registration_dto->summaryTaggedText);


  		




  
  788
  
    
  foreach ($tagged_text_expanded  as $tagged_text){


  		




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    if(isset($tagged_text->entityReference->type) && $tagged_text->entityReference->type == 'SpecimenTypeDesignation') {


  		




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      $mediaDTOs = cdm_ws_get('typedesignation/$0/media', array($tagged_text->entityReference->uuid));


  		




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      if(isset($mediaDTOs[0]->uri)){


  		




  ......




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      }


  		




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    }


  		




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  }


  		




  797
  
  
    
  $registation_markup = cdm_tagged_text_to_markup($taggged_text_expanded);


  		




  
  798
  
    
  $registation_markup = cdm_tagged_text_to_markup($tagged_text_expanded);


  		




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  foreach($media_link_map as $media_url_key => $link){


  		




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    $registation_markup = str_replace($media_url_key, $link, $registation_markup);


  		




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  }


  		












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