1
|
<?php
|
2
|
// $Id$
|
3
|
|
4
|
/**
|
5
|
* Copyright (C) 2007 EDIT
|
6
|
* European Distributed Institute of Taxonomy
|
7
|
* http://www.e-taxonomy.eu
|
8
|
*
|
9
|
* The contents of this file are subject to the Mozilla Public License Version 1.1
|
10
|
* See http://www.mozilla.org/MPL/MPL-1.1.html for the full license terms.
|
11
|
*/
|
12
|
|
13
|
|
14
|
function _add_js_openlayers_map(){
|
15
|
|
16
|
drupal_add_js(drupal_get_path('module', 'cdm_dataportal').'/js/OpenLayers/OpenLayers.js', 'core', 'header');
|
17
|
drupal_add_js(drupal_get_path('module', 'cdm_dataportal').'/js/openlayers_map.js');
|
18
|
drupal_add_js("
|
19
|
if (Drupal.jsEnabled) {
|
20
|
$(document).ready(function() {
|
21
|
$('#openlayers_map').cdm_openlayers_map('"
|
22
|
.variable_get('cdm_dataportal_geoservice_access_point', false)."', {
|
23
|
legendPosition: 3,
|
24
|
displayWidth: '" . variable_get('cdm_dataportal_geoservice_display_width', false) . "',
|
25
|
boundingBox: '" . variable_get('cdm_dataportal_geoservice_bounding_box', false) . "',
|
26
|
distributionOpacity: '" . variable_get('cdm_dataportal_geoservice_distributionOpacity', '0.5') . "',
|
27
|
legendOpacity: '" . variable_get('cdm_dataportal_geoservice_legendOpacity', '0.5') . "'
|
28
|
});
|
29
|
});
|
30
|
}", 'inline');
|
31
|
|
32
|
}
|
33
|
|
34
|
function theme_cdm_feature_nodesTOC($featureNodes){
|
35
|
|
36
|
$out .= '<ul>';
|
37
|
|
38
|
foreach($featureNodes as $node){
|
39
|
// process $descriptionElements with content only
|
40
|
if(is_array($node->descriptionElements) && count($node->descriptionElements) > 0 || count($node->children) > 0){
|
41
|
|
42
|
$featureRepresentation = isset($node->feature->representation_L10n) ? $node->feature->representation_L10n : 'Feature';
|
43
|
// HACK to implement images for taxa, should be removed
|
44
|
if($node->feature->uuid != UUID_IMAGE){
|
45
|
$out .= '<li>'.l(t(theme('cdm_feature_name', $featureRepresentation)), $_GET['q'], array("class"=>"toc"), NULL, generalizeString($featureRepresentation)).'</li>';
|
46
|
}
|
47
|
}
|
48
|
}
|
49
|
|
50
|
$out .= '</ul>';
|
51
|
return $out;
|
52
|
}
|
53
|
|
54
|
function theme_cdm_feature_name($feature_name){
|
55
|
//TODO replace by using translations ?
|
56
|
switch($feature_name){
|
57
|
default: return t(ucfirst($feature_name));
|
58
|
}
|
59
|
}
|
60
|
|
61
|
function theme_cdm_featureTrees($mergedTrees, $taxon){
|
62
|
if(!$mergedTrees){
|
63
|
return;
|
64
|
}
|
65
|
foreach($mergedTrees as &$mTree){
|
66
|
//TODO diplay title and reference in case of multiple $mergedTrees -> theme
|
67
|
$out .= theme('cdm_feature_nodes', $mTree->root->children, $taxon);
|
68
|
}
|
69
|
return $out;
|
70
|
}
|
71
|
|
72
|
|
73
|
|
74
|
function theme_cdm_featureTreeTOCs($mergedTrees){
|
75
|
|
76
|
if(!$mergedTrees){
|
77
|
return;
|
78
|
}
|
79
|
//FIXME
|
80
|
$out = '<div class="featureTOC">';
|
81
|
$out .= '<h2>' . t('Content') .'</h2>';
|
82
|
|
83
|
//TODO diplay title and reference in case of multiple $mergedTrees -> theme
|
84
|
|
85
|
foreach($mergedTrees as &$mTree){
|
86
|
$out .= theme('cdm_feature_nodesTOC', $mTree->root->children);
|
87
|
}
|
88
|
|
89
|
$out .= '</div>';
|
90
|
return $out;
|
91
|
}
|
92
|
|
93
|
|
94
|
|
95
|
function theme_cdm_feature_nodes($featureNodes, $taxon){
|
96
|
|
97
|
RenderHints::pushToRenderStack('feature_nodes');
|
98
|
$gallery_settings = getGallerySettings(CDM_DATAPORTAL_DESCRIPTION_GALLERY_NAME);
|
99
|
|
100
|
foreach($featureNodes as $node){
|
101
|
// process $descriptionElements with content only
|
102
|
if(is_array($node->descriptionElements) && count($node->descriptionElements) > 0 || count($node->children) > 0){
|
103
|
$featureRepresentation = isset($node->feature->representation_L10n) ? $node->feature->representation_L10n : 'Feature';
|
104
|
$block->module = 'cdm_dataportal';
|
105
|
|
106
|
if($node->feature->uuid != UUID_IMAGE){
|
107
|
$block->delta = generalizeString($featureRepresentation);
|
108
|
$block->subject = theme('cdm_feature_name', $featureRepresentation);
|
109
|
$block->module = "cdm_dataportal-feature";
|
110
|
$block->content = '';
|
111
|
|
112
|
// Display cdm distribution map TODO this is a HACK to a proper generic implementation?
|
113
|
if($node->feature->uuid == UUID_DISTRIBUTION){
|
114
|
$block->content .= theme('cdm_distribution_map', $taxon);
|
115
|
}
|
116
|
|
117
|
//get the text for the feature block
|
118
|
//if ($node->feature->titleCache == 'Common Name'){
|
119
|
if ($node->feature->uuid == UUID_COMMON_NAME){
|
120
|
$block->content .= theme('cdm_common_names', $node->descriptionElements);
|
121
|
} else {
|
122
|
$block->content .= theme('cdm_descriptionElements', $node->descriptionElements, $node->feature->uuid, $taxon->uuid);
|
123
|
}
|
124
|
|
125
|
// get media for the feature block
|
126
|
$media_list = cdm_dataportal_media_from_descriptionElements($node->descriptionElements);
|
127
|
$captionElements = array('title', 'rights');
|
128
|
//$block->content .= theme('cdm_media_gallerie', $media_list, "test", 150, 4, false, $captionElements);
|
129
|
$block->content .= theme('cdm_media_gallery', $media_list,
|
130
|
CDM_DATAPORTAL_DESCRIPTION_GALLERY_NAME.'_'.$node->feature->uuid,
|
131
|
$gallery_settings['cdm_dataportal_media_maxextend'],
|
132
|
$gallery_settings['cdm_dataportal_media_cols'],
|
133
|
$gallery_settings['cdm_dataportal_media_maxRows'],
|
134
|
$captionElements
|
135
|
);
|
136
|
|
137
|
$block->content .= theme('cdm_footnotes', $node->feature->uuid);
|
138
|
$block->content .= theme('cdm_annotation_footnotes', $node->feature->uuid);
|
139
|
|
140
|
// set anchor; FIXME put anchor in $block->subject
|
141
|
$out .= '<a name="'.$block->delta.'"></a>';
|
142
|
$out .= theme('block', $block);
|
143
|
|
144
|
}
|
145
|
}
|
146
|
// theme
|
147
|
if(count($node->children) > 0){
|
148
|
/*
|
149
|
$out .= '<div class="nested_description_elements">';
|
150
|
$out .= theme('cdm_feature_nodes', $node->children, $taxon);
|
151
|
$out .= '</div>';
|
152
|
*/
|
153
|
$text = '';
|
154
|
foreach ($node->children as $child){
|
155
|
//$out .= theme('cdm_descriptionElementTextData', $child->descriptionElements[0], false);
|
156
|
if (is_array($child->descriptionElements)){//if condition added to avoid warnings
|
157
|
foreach ($child->descriptionElements as $element) {
|
158
|
$description = str_replace("\n", "<br/>", $element->multilanguageText_L10n->text);
|
159
|
$description = str_replace($element->feature->titleCache, '<em>' . $element->feature->titleCache . '</em>', $description);
|
160
|
}
|
161
|
$text .= $description;
|
162
|
$description = '';
|
163
|
}
|
164
|
}
|
165
|
$out .= $text;
|
166
|
}
|
167
|
|
168
|
}
|
169
|
RenderHints::popFromRenderStack();
|
170
|
return $out;
|
171
|
}
|
172
|
|
173
|
|
174
|
|
175
|
|
176
|
function theme_cdm_descriptionElementArray($elementArray, $feature, $glue = '', $sortArray = false, $enclosingHtml = 'ul'){
|
177
|
$out = '<'.$enclosingHtml.' class="description" id="'.$feature->representation_L10n.'">';
|
178
|
|
179
|
if($sortArray) sort($elementArray);
|
180
|
|
181
|
$out .= join($elementArray, $glue);
|
182
|
|
183
|
$out .= '</'.$enclosingHtml.'>';
|
184
|
return $out;
|
185
|
}
|
186
|
|
187
|
|
188
|
function theme_cdm_descriptionElement_CommonTaxonName($element){
|
189
|
$out = $element->language->representation_L10n . ' (' . $element->area->titleCache . '): ' . $element->name;
|
190
|
return $out;
|
191
|
}
|
192
|
/**
|
193
|
* TODO: assign a new name to the function? because it is used for the citations
|
194
|
* textdata elements and not for all text data description elements
|
195
|
* @param $element The description element which contains the text information
|
196
|
* @param $asListElement A boolean which determines whether the citations should
|
197
|
* be renderer as a list or not
|
198
|
* @return unknown_type Html to be renderized in drupal
|
199
|
*/
|
200
|
function theme_cdm_descriptionElementTextData($element, $asListElement, $feature_uuid){
|
201
|
$description = str_replace("\n", "<br/>", $element->multilanguageText_L10n->text);
|
202
|
$sourceRefs = '';
|
203
|
$result = array();
|
204
|
$out;
|
205
|
$res_author;
|
206
|
$res_date;
|
207
|
|
208
|
if(is_array($element->sources)){
|
209
|
foreach($element->sources as $source){
|
210
|
$referenceCitation = theme('cdm_DescriptionElementSource', $source);
|
211
|
if($description && strlen($description) > 0 && $referenceCitation ){
|
212
|
$sourceRefs .= ' ('.$referenceCitation.')' ;
|
213
|
}else if ($referenceCitation){
|
214
|
$sourceRefs = $referenceCitation;
|
215
|
}
|
216
|
|
217
|
if(strlen($sourceRefs) > 0){
|
218
|
$sourceRefs = '<span class="sources">' . $sourceRefs . '</span>';
|
219
|
}
|
220
|
|
221
|
if ($source->nameUsedInSource->uuid){ //do a link to name page
|
222
|
$name_used_in_source_link_to_show = l($source->nameUsedInSource->titleCache,
|
223
|
path_to_name($source->nameUsedInSource->uuid),
|
224
|
array(), NULL, NULL, FALSE ,TRUE);
|
225
|
}else if (strlen($source->nameUsedInSource->originalNameString) > 0){ //show a text without link
|
226
|
$name_used_in_source_link_to_show = $source->nameUsedInSource->originalNameString;
|
227
|
}
|
228
|
|
229
|
if ($asListElement){
|
230
|
$out = '<li class="descriptionText">' . $name_used_in_source_link_to_show;
|
231
|
//adding ":" if necesary
|
232
|
if ($name_used_in_source_link_to_show && ($description || $sourceRefs)){
|
233
|
$out .= ': ';
|
234
|
}
|
235
|
$out .= $description . $sourceRefs . theme('cdm_annotations_as_footnotekeys', $element) . '</li>';
|
236
|
}else{
|
237
|
if ($name_used_in_source_link_to_show){
|
238
|
$name_used_in_source_link_to_show = ' (name in source: '. $name_used_in_source_link_to_show . ')';
|
239
|
}
|
240
|
$out = $description . $sourceRefs . $name_used_in_source_link_to_show;
|
241
|
}
|
242
|
}
|
243
|
}
|
244
|
//if no sources, print the description
|
245
|
if(!isset($out)) {
|
246
|
$out = $description;
|
247
|
}
|
248
|
//printing annotations footnotes
|
249
|
//$out .= theme('cdm_annotations_as_footnotekeys', $element);
|
250
|
// add annotations as footnote key
|
251
|
//$out .= theme('cdm_annotations_as_footnotekeys', $element); move above
|
252
|
return $out;
|
253
|
}
|
254
|
|
255
|
function theme_cdm_common_names($elements){
|
256
|
$text_data_out = '';
|
257
|
$common_name_out = '';
|
258
|
$separator = ',';
|
259
|
$textData_commonNames = array();
|
260
|
|
261
|
if (is_array($elements)){
|
262
|
foreach ($elements as $element){
|
263
|
if ($element->class == 'CommonTaxonName'){
|
264
|
//$key = '<b>' . $element->language->representation_L10n . '</b> (' . $element->area->titleCache . ')';
|
265
|
$key = '<b>' . $element->language->representation_L10n . '</b>';
|
266
|
$key .= (strlen($element->area->titleCache)>0) ? ' (' . $element->area->titleCache . ')' : '';
|
267
|
$common_names[$key][] = $element;
|
268
|
}else if ($element->class == 'TextData' && $element->feature->uuid == UUID_COMMON_NAME){
|
269
|
$textData_commonNames[] = $element;
|
270
|
}
|
271
|
}
|
272
|
}
|
273
|
//handling common names
|
274
|
if (count($common_names) > 0){
|
275
|
//sorting the a-array based on the area (key)
|
276
|
ksort($common_names);
|
277
|
//creating the output to be render by drupal
|
278
|
foreach ($common_names as $key => $elements){
|
279
|
|
280
|
$rendered_element_list = '';
|
281
|
foreach($elements as $element){
|
282
|
$sourcesFootnoteKeyList = '';
|
283
|
// addinf footnotes sources
|
284
|
foreach($element->sources as $source){
|
285
|
if(_is_original_source_type($source)){
|
286
|
$_fkey = FootnoteManager::addNewFootnote(UUID_COMMON_NAME, theme('cdm_DescriptionElementSource', $source, false));
|
287
|
$sourcesFootnoteKeyList .= theme('cdm_footnote_key', $_fkey, ($sourcesFootnoteKeyList ? $separator : ''));
|
288
|
}
|
289
|
}
|
290
|
$rendered_element_list .= (strlen($rendered_element_list) > 0 ? ', ': '') . $element->name . $sourcesFootnoteKeyList;
|
291
|
}
|
292
|
$common_name_out .= (strlen($common_name_out) > 0 ? '; ': '') . $key . ': ' . $rendered_element_list;
|
293
|
|
294
|
}
|
295
|
}
|
296
|
//handling commons names as text data
|
297
|
foreach($textData_commonNames as $text_data_element){
|
298
|
$text_data_out .= theme('cdm_descriptionElementTextData', $text_data_element, true, $text_data_element->feature->uuid);
|
299
|
}
|
300
|
$out_array[] = $text_data_out;
|
301
|
return $common_name_out . theme('cdm_descriptionElementArray', $out_array, $element->feature);
|
302
|
}
|
303
|
|
304
|
/**
|
305
|
* Theme a list of description elements, usually of a specific feature type
|
306
|
* @param $descriptionElements
|
307
|
* @return unknown_type
|
308
|
*/
|
309
|
function theme_cdm_descriptionElements($descriptionElements, $featureUuid, $taxon_uuid){
|
310
|
$outArray = array();
|
311
|
if(variable_get('distribution_sort', false)){
|
312
|
$glue = '';
|
313
|
$enclosingHtml = 'dl';
|
314
|
} else {
|
315
|
$glue = '';
|
316
|
$enclosingHtml = 'ul';
|
317
|
}
|
318
|
$sortOutArray = false;
|
319
|
$distributionElements = array();
|
320
|
|
321
|
RenderHints::pushToRenderStack('cdm_descriptionElements');
|
322
|
$common_names = theme('cdm_common_names', $descriptionElements);
|
323
|
if(is_array($descriptionElements)){//avoiding warning box in drupal for flora malesiana
|
324
|
foreach($descriptionElements as $descriptionElement){
|
325
|
if($descriptionElement->feature->uuid == UUID_DISTRIBUTION){
|
326
|
if($descriptionElement->class == 'Distribution'){
|
327
|
$distributionElements[]= $descriptionElement;
|
328
|
} else if($descriptionElement->class == 'TextData'){
|
329
|
$asListElement = false;
|
330
|
$repr = theme ('cdm_descriptionElementTextData', $descriptionElement, $asListElement, $descriptionElement->feature->uuid);
|
331
|
|
332
|
if( !array_search($repr, $outArray)){
|
333
|
$outArray[] = $repr;
|
334
|
$glue = '<br/> ';
|
335
|
$sortOutArray = true;
|
336
|
$enclosingHtml = 'p';
|
337
|
}
|
338
|
}
|
339
|
}else if($descriptionElement->class == 'TextData'){
|
340
|
$asListElement = true;
|
341
|
$outArray[] = theme('cdm_descriptionElementTextData', $descriptionElement, $asListElement, $descriptionElement->feature->uuid);
|
342
|
}else if ($descriptionElement->class == 'CommonTaxonName') {
|
343
|
$outArray[] = theme('cdm_descriptionElement_CommonTaxonName', $descriptionElement);
|
344
|
}else {
|
345
|
$outArray[] = '<li>No method for rendering unknown description class: '.$descriptionElement->classType.'</li>';
|
346
|
}
|
347
|
}
|
348
|
}
|
349
|
//if feature = NAME USAGE sort the list of sources
|
350
|
//this is ONLY for FLORA MALESIANA and FLORE d'AFRIQUE CENTRALE
|
351
|
if($descriptionElement->feature->uuid == UUID_NAME_USAGE){
|
352
|
sort($outArray);
|
353
|
}
|
354
|
|
355
|
if(variable_get('distribution_sort', false)){
|
356
|
$outArray[] = theme('cdm_description_ordered_distributions', $taxon_uuid, $distributionElements);
|
357
|
}else{
|
358
|
$outArray[] = theme('cdm_descriptionElementDistribution', $distributionElements);
|
359
|
}
|
360
|
//$outArray[] = theme('cdm_descriptionElementDistribution', $distributionElements);
|
361
|
//$outArray[] = theme('cdm_description_ordered_distributions', $taxon_uuid, $distributionElements);
|
362
|
|
363
|
// take the feature of the last $descriptionElement
|
364
|
$feature = $descriptionElement->feature;
|
365
|
$out = theme('cdm_descriptionElementArray', $outArray, $feature, $glue, $sortOutArray, $enclosingHtml);
|
366
|
|
367
|
RenderHints::popFromRenderStack();
|
368
|
return $out;
|
369
|
}
|
370
|
|
371
|
/**
|
372
|
*
|
373
|
* @param unknown_type $descriptionElements
|
374
|
* @return unknown_type
|
375
|
*/
|
376
|
function theme_cdm_descriptionElementDistribution($descriptionElements){
|
377
|
$out = '';
|
378
|
$separator = ',';
|
379
|
RenderHints::pushToRenderStack('descriptionElementDistribution');
|
380
|
RenderHints::setFootnoteListKey(UUID_DISTRIBUTION);
|
381
|
foreach($descriptionElements as $descriptionElement){
|
382
|
// annotations as footnotes
|
383
|
//$annotationFootnoteKeys = theme('cdm_annotations_as_footnotekeys', $descriptionElement);
|
384
|
$footNoteKeys = cdm_annotations_as_footnotekeys($descriptionElement);
|
385
|
// source references as footnotes
|
386
|
foreach($descriptionElement->sources as $source){
|
387
|
if(_is_original_source_type($source)){
|
388
|
$fn_key = FootnoteManager::addNewFootnote(RenderHints::getFootnoteListKey(), theme('cdm_DescriptionElementSource', $source, false));
|
389
|
cdm_add_footnote_to_array($footNoteKeys, $fn_key);// ensure uniqueness of the footnote keys
|
390
|
}
|
391
|
}
|
392
|
// sort and render footnote keys
|
393
|
$footnoteKeyListStr = '';
|
394
|
asort($footNoteKeys);
|
395
|
foreach($footNoteKeys as $footNoteKey){
|
396
|
$footnoteKeyListStr .= theme('cdm_footnote_key', $footNoteKey, ($footnoteKeyListStr ? $separator : ''));
|
397
|
}
|
398
|
$out .= '<span class="descriptionElement descriptionElement-'.$descriptionElement->uuid.'">'.$descriptionElement->area->representation_L10n . $footnoteKeyListStr . ' </span>';
|
399
|
}
|
400
|
|
401
|
//$out = substr($out, 0, strlen($out)-strlen($separator) );
|
402
|
|
403
|
RenderHints::popFromRenderStack();
|
404
|
return $out;
|
405
|
|
406
|
}
|
407
|
|
408
|
function theme_cdm_description_ordered_distributions($taxon_uuid, $descriptionElements){
|
409
|
|
410
|
if ($descriptionElements == null){
|
411
|
return '';
|
412
|
}
|
413
|
$out = '';
|
414
|
$separator = ',';
|
415
|
RenderHints::pushToRenderStack('descriptionElementDistribution');
|
416
|
RenderHints::setFootnoteListKey(UUID_DISTRIBUTION);
|
417
|
|
418
|
//getting all the taxon description for a given taxon
|
419
|
$taxonDescriptions = cdm_ws_get(CDM_WS_PORTAL_TAXON_DESCRIPTIONS, $taxon_uuid);
|
420
|
foreach ($taxonDescriptions as $description){
|
421
|
$descriptions_uuids[] = $description->uuid;
|
422
|
}
|
423
|
//getting the sortered distributions (omiting level ??)
|
424
|
$request_params = array();
|
425
|
$request_params['omitLevels'] = UUID_NAMEDAREALEVEL_TDWGLEVEL_2;
|
426
|
//$ordered_areas = cdm_ws_get(CDM_WS_PORTAL_DESCRIPTION_AREAS_TREE, $descriptions_uuids, queryString($request_params));
|
427
|
$ordered_areas2 = cdm_ws_get(CDM_WS_PORTAL_DESCRIPTION_DISTRIBUTION_TREE, $descriptions_uuids, queryString($request_params));
|
428
|
$ordered_areas2 = $ordered_areas2->rootElement->children;
|
429
|
|
430
|
//printing the distributions
|
431
|
foreach ($ordered_areas2 as $element_l1){//level 1
|
432
|
|
433
|
if ($element_l1->data){
|
434
|
$out .= '<dt>' . $element_l1->data->area->representation_L10n . ':</dt> ';
|
435
|
}
|
436
|
$out .= '<dd>';
|
437
|
foreach ($element_l1->children as $element_l3){//level 3
|
438
|
$out_l4 = '';
|
439
|
if ($element_l3->data){
|
440
|
$l3 = $element_l3->data->area->representation_L10n;
|
441
|
}
|
442
|
if (sizeof($element_l3->children) == 0){
|
443
|
$footnoteKeyListStr2 = '';
|
444
|
$footNoteKeys2 = cdm_annotations_as_footnotekeys($element_l3->data);
|
445
|
foreach($element_l3->data->sources as $source){
|
446
|
if(_is_original_source_type($source)){
|
447
|
//$footNoteKeys2[] = FootnoteManager::addNewFootnote(RenderHints::getFootnoteListKey(), theme('cdm_DescriptionElementSource', $source, false));
|
448
|
$fn_key = FootnoteManager::addNewFootnote(RenderHints::getFootnoteListKey(), theme('cdm_DescriptionElementSource', $source, false));
|
449
|
cdm_add_footnote_to_array($footNoteKeys2, $fn_key);
|
450
|
}
|
451
|
}
|
452
|
foreach($footNoteKeys2 as $key){
|
453
|
$footnoteKeyListStr2 .= theme('cdm_footnote_key', $key, ($footnoteKeyListStr2 ? $separator : ''));
|
454
|
}
|
455
|
$out_l4 .= $l3 . $footnoteKeyListStr2 . ', ';
|
456
|
}
|
457
|
foreach ($element_l3->children as $element_l4){//level 4
|
458
|
if ($element_l4->data){
|
459
|
$l4 = $element_l4->data->area->representation_L10n;
|
460
|
if (strlen($l4) > 0){
|
461
|
//$out_l4 .= $l4;
|
462
|
$footnoteKeyListStr = '';
|
463
|
$footNoteKeys = cdm_annotations_as_footnotekeys($element_l4->data);
|
464
|
if(isset($element_l4->data->sources)){
|
465
|
foreach($element_l4->data->sources as $source){
|
466
|
if(_is_original_source_type($source)){
|
467
|
//$footNoteKeys[] = FootnoteManager::addNewFootnote(RenderHints::getFootnoteListKey(), theme('cdm_DescriptionElementSource', $source, false));
|
468
|
$fn_key = FootnoteManager::addNewFootnote(RenderHints::getFootnoteListKey(), theme('cdm_DescriptionElementSource', $source, false));
|
469
|
cdm_add_footnote_to_array($footNoteKeys, $fn_key);
|
470
|
}
|
471
|
}
|
472
|
}
|
473
|
foreach($footNoteKeys as $key){
|
474
|
$footnoteKeyListStr .= theme('cdm_footnote_key', $key, ($footnoteKeyListStr ? $separator : ''));
|
475
|
}
|
476
|
$out_l4 .= $l4 . $footnoteKeyListStr .', ';
|
477
|
}
|
478
|
}
|
479
|
}
|
480
|
$out_l4 = substr($out_l4, 0, -2);
|
481
|
//$out_l4 = '<span class="descriptionElement descriptionElement-' . $element_l4->data->uuid.'">' . $out_l4 . '</span>';
|
482
|
$pieces1 = explode(", ", $out_l4);
|
483
|
$pieces2 = explode('<span class="footnote-key', $pieces1[0]);
|
484
|
if (((sizeof($pieces1) == 1) && substr_count($pieces2[0], $l3) > 0) || strlen($out_l4)<2){
|
485
|
$out .= $out_l4 . '; ';
|
486
|
}else{
|
487
|
$out .= $l3 . ' (' . $out_l4 . '); ';
|
488
|
}
|
489
|
}
|
490
|
$out = substr($out, 0, -2);
|
491
|
$out .= '.</dd>';
|
492
|
}
|
493
|
RenderHints::popFromRenderStack();
|
494
|
return $out;
|
495
|
|
496
|
//ignoring the root element because is garbage
|
497
|
/*
|
498
|
$ordered_areas = $ordered_areas->rootElement->children;
|
499
|
$out = '';
|
500
|
|
501
|
foreach ($ordered_areas as $element_l1){//level 1
|
502
|
if ($element_l1->data){
|
503
|
//$result[] = $element_l1->data->titleCache;
|
504
|
$out .= '<b>' . $element_l1->data->titleCache . ':</b> ';
|
505
|
}
|
506
|
foreach ($element_l1->children as $element_l2){//level 2
|
507
|
$out_l3 = '';
|
508
|
if ($element_l2->data){
|
509
|
//$result[][] = $element_l2->data->titleCache;
|
510
|
//$out .= $element_l2->data->titleCache . '[';
|
511
|
}
|
512
|
foreach ($element_l2->children as $element_l3){//level 3
|
513
|
$out_l4 = '';
|
514
|
if ($element_l3->data){
|
515
|
//$result[][][] = $element_l3->data->titleCache;
|
516
|
$out .= $element_l3->data->titleCache;
|
517
|
|
518
|
$l3 = $element_l3->data->titleCache;
|
519
|
}
|
520
|
foreach ($element_l3->children as $element_l4){//level 4
|
521
|
if ($element_l4->data){
|
522
|
//$result[][][][] = $element_14->data->titleCache;
|
523
|
$l4 = $element_l4->data->titleCache;
|
524
|
if (sizeof($l4) != 0 && $l4 != $l3){
|
525
|
$out_l4 .= $l4 . ', ';
|
526
|
}
|
527
|
}
|
528
|
}
|
529
|
$out_l4 = substr($out_l4, 0, -2);
|
530
|
if($out_l4){
|
531
|
$out .= ' (' . $out_l4 . '); ';
|
532
|
}else{
|
533
|
$out .= '; ';
|
534
|
}
|
535
|
}
|
536
|
}
|
537
|
$out = substr($out, 0, -2);
|
538
|
$out .= '<br>';
|
539
|
}
|
540
|
*/
|
541
|
}
|
542
|
|
543
|
|
544
|
function theme_cdm_DescriptionElementSource($descriptionElementSource, $doLink = TRUE){
|
545
|
|
546
|
if(isset($descriptionElementSource->citation)){
|
547
|
$out = theme('cdm_reference', $descriptionElementSource->citation, $descriptionElementSource->citationMicroReference, $doLink);
|
548
|
}
|
549
|
return $out;
|
550
|
}
|
551
|
|
552
|
|
553
|
/*
|
554
|
function theme_cdm_descriptionElementDistribution($descriptionElements){
|
555
|
|
556
|
$out = '';
|
557
|
$separator = ',';
|
558
|
RenderHints::pushToRenderStack('descriptionElementDistribution');
|
559
|
RenderHints::setFootnoteListKey(UUID_DISTRIBUTION);
|
560
|
foreach($descriptionElements as $descriptionElement){
|
561
|
// annotations as footnotes
|
562
|
$annotationFootnoteKeys = theme('cdm_annotations_as_footnotekeys', $descriptionElement);
|
563
|
// source references as footnotes
|
564
|
$sourcesFootnoteKeyList = '';
|
565
|
foreach($descriptionElement->sources as $source){
|
566
|
if(_is_original_source_type($source)){
|
567
|
$_fkey = FootnoteManager::addNewFootnote(UUID_DISTRIBUTION, theme('cdm_DescriptionElementSource', $source, false));
|
568
|
$sourcesFootnoteKeyList .= theme('cdm_footnote_key', $_fkey, UUID_DISTRIBUTION, ($sourcesFootnoteKeyList ? $separator : ''));
|
569
|
}
|
570
|
}
|
571
|
if($annotationFootnoteKeys && $sourcesFootnoteKeyList){
|
572
|
$annotationFootnoteKeys .= $separator;
|
573
|
}
|
574
|
$out .= $descriptionElement->area->representation_L10n . $annotationFootnoteKeys . $sourcesFootnoteKeyList . ' ';
|
575
|
}
|
576
|
|
577
|
$out = substr($out, 0, strlen($out)-strlen($separator) );
|
578
|
|
579
|
RenderHints::popFromRenderStack();
|
580
|
return $out;
|
581
|
|
582
|
}
|
583
|
*/
|
584
|
|
585
|
|
586
|
/**
|
587
|
* TODO
|
588
|
* Quick-and-dirty solution to show distribution service to exemplar groups
|
589
|
*
|
590
|
* @param unknown_type $featureTo
|
591
|
* @return unknown
|
592
|
*/
|
593
|
function theme_cdm_distribution_map($taxon){
|
594
|
|
595
|
$server = variable_get('cdm_dataportal_geoservice_access_point', false);
|
596
|
|
597
|
if(!$server){
|
598
|
//warning message
|
599
|
drupal_set_message('No \'Geoservice Access Point\' has been set so far. '
|
600
|
. 'Please configure the variable \'Geoservice Access Point\' here '
|
601
|
. l('CDM Dataportal Settings', 'admin/settings/cdm_dataportal/geo'), 'warning');
|
602
|
//message to render
|
603
|
return "<p>No geoservice specified</p>";
|
604
|
}else{
|
605
|
$fontStyles = array(0 => "plane", 1 => "italic");
|
606
|
|
607
|
$map_data_parameters = cdm_ws_get(CDM_WS_GEOSERVICE_DISTRIBUTIONMAP, $taxon->uuid);
|
608
|
$query_string = $map_data_parameters->String;
|
609
|
if(!$query_string){
|
610
|
// the $query_string is empty if there are no distribution areas defined
|
611
|
return ;
|
612
|
}
|
613
|
|
614
|
$query_string = str_replace('%3A', ":", $query_string);
|
615
|
|
616
|
$display_width = variable_get('cdm_dataportal_geoservice_display_width', false);
|
617
|
$bounding_box = variable_get('cdm_dataportal_geoservice_bounding_box', false);
|
618
|
$labels_on = variable_get('cdm_dataportal_geoservice_labels_on', 0);
|
619
|
|
620
|
$query_string .= ($display_width ? '&img=false&ms=' . $display_width: '').
|
621
|
($bounding_box ? '&bbox=' . $bounding_box : '')
|
622
|
. ($labels_on ? '&labels=' . $labels_on : '');
|
623
|
|
624
|
if(variable_get('cdm_dataportal_map_openlayers', 1)){
|
625
|
|
626
|
/* =========== display distributions using the openlayers map viewer =========== */
|
627
|
|
628
|
$legend_url_font_size = variable_get('cdm_dataportal_geoservice_legend_font_size', 10);
|
629
|
$legend_url_font_style = variable_get('cdm_dataportal_geoservice_legend_font_style', 1);
|
630
|
$legend_url_font_style = $fontStyles[$legend_url_font_style];
|
631
|
$legend_url_icon_width = variable_get('cdm_dataportal_geoservice_legend_icon_width', 35);
|
632
|
$legend_url_icon_height = variable_get('cdm_dataportal_geoservice_legend_icon_height', 15);
|
633
|
|
634
|
//$legendQueryStr = $geoserver_uri . "/GetLegendGraphic?SERVICE=WMS&VERSION=1.1.1&format=image".urlencode('/')."png&TRANSPARENT=TRUE";
|
635
|
$legendFormatQueryStr = "format=image".urlencode('/')."png&TRANSPARENT=TRUE";
|
636
|
$legendFormatQueryStr .= "&WIDTH=".$legend_url_icon_width."&HEIGHT=".$legend_url_icon_height."&";
|
637
|
$legendFormatQueryStr .="layer=topp".urlencode(':')."tdwg_level_4&LEGEND_OPTIONS=forceLabels".urlencode(':')."on;fontStyle".urlencode(':').$legend_url_font_style.";fontSize".urlencode(':').$legend_url_font_size."&SLD=".urlencode($sldLegend);
|
638
|
|
639
|
$out = get_openlayers_map(
|
640
|
$display_width,
|
641
|
null,
|
642
|
$query_string,
|
643
|
$legendFormatQueryStr,
|
644
|
variable_get('cdm_dataportal_geoservice_map_caption', '')
|
645
|
);
|
646
|
|
647
|
} else {
|
648
|
// simple image
|
649
|
$mapStaticCaption = '&mc_s=Georgia,15,blue&mc=' . variable_get('cdm_dataportal_geoservice_map_caption', '');
|
650
|
|
651
|
$query_string .= ($display_width ? '&img=true&ms=' . $display_width: '')
|
652
|
.'&img=true&legend=1&mlp=3' . $mapStaticCaption . '&recalculate=false';
|
653
|
|
654
|
$mapUri = url($server. '/areas.php?' .$map_data_parameters->String, $query_string);
|
655
|
$out .= '<img class="distribution_map" src="' . $mapUri . '" alt="Distribution Map" />';
|
656
|
}
|
657
|
/*
|
658
|
// add a simple legend
|
659
|
if(variable_get('cdm_dataportal_geoservice_legend_on', TRUE)){
|
660
|
$legenddata = array(
|
661
|
'native' => "4daf4a",
|
662
|
'native_doubtfully_native' => "377eb8",
|
663
|
'cultivated' => "984ea3",
|
664
|
'introduced' => "ff7f00",
|
665
|
'introduced adventitious' => "ffff33",
|
666
|
'introduced cultivated' => "a65628",
|
667
|
'introduced naturalized' => "f781bf"
|
668
|
);
|
669
|
|
670
|
$out .= '<div class="distribution_map_legend">';
|
671
|
foreach($legenddata as $term => $color){
|
672
|
$out .= '<img style="width: 3em; height: 1em; background-color: #'.$color.'" src="'.
|
673
|
drupal_get_path('module', 'cdm_dataportal').'/images/clear.gif" />'.t($term).' ';
|
674
|
}
|
675
|
$out .= '</div>';
|
676
|
|
677
|
}
|
678
|
*/
|
679
|
return $out;
|
680
|
}
|
681
|
}
|