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c70b93c3
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Andreas Kohlbecker
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<?php
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f19f47fa
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Andreas Kohlbecker
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/**
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* @file
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* Page functions.
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*
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* @copyright
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* (C) 2007-2012 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this module are subject to the Mozilla
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* Public License Version 1.1.
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c70b93c3
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Andreas Kohlbecker
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* @see http://www.mozilla.org/MPL/MPL-1.1.html
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*
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* @author
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f19f47fa
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Andreas Kohlbecker
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* - Andreas Kohlbecker <a.kohlbecker@BGBM.org>
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*/
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/**
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* Creates a render array representing the ocurrences associetad with the $taxon.
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*
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* The resulting render array contains two elements:
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* - 'map': A map showing all point locations of the occurences is availabale
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* - 'specimen_list': the list of occurences prepated as table for theme_table()
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*
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* @param object $taxon
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* A cdm Taxon object
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* @return
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* A render array suitable for drupal_render()
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*
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c70b93c3
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Andreas Kohlbecker
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*/
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f19f47fa
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Andreas Kohlbecker
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function cdm_dataportal_taxon_page_specimens($taxon) {
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1ce9afb7
|
Patric Plitzner
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$render_array = array();
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RenderHints::pushToRenderStack('taxon_page_specimens');
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| 37 |
30f78c59
|
Andreas Kohlbecker
|
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| 38 |
b8afc4bb
|
Patric Plitzner
|
$relationship_choice = variable_get(CDM_AGGREGATE_BY_TAXON_RELATIONSHIPS, unserialize(CDM_AGGREGATE_BY_TAXON_RELATIONSHIPS_DEFAULT));
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$relationship_choice['direct'] = get_selection($relationship_choice['direct']);
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$relationship_choice['invers'] = get_selection($relationship_choice['invers']);
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$by_associatedtaxon_query_parameters = array(
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'relationshipsInvers' => implode(',', $relationship_choice['invers']),
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'relationships' => implode(',', $relationship_choice['direct']),
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);
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if (isset($_REQUEST['pager']) && is_array($_REQUEST['pager'])) {
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$by_associatedtaxon_query_parameters = array_merge($by_associatedtaxon_query_parameters, $_REQUEST['pager']);
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}
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$by_associatedtaxon_query = http_build_query($by_associatedtaxon_query_parameters);
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$pager = cdm_ws_get(CDM_WS_OCCURRENCE_BY_ASSOCIATEDTAXON,
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null,
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$by_associatedtaxon_query . '&taxonUuid=' . $taxon->uuid
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);
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$specimensOrObservations = array();
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if(isset($pager->records[0])){
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$specimensOrObservations = $pager->records;
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}
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// order occurrences by date but types should be on top of the list
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$type_specimens = array();
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$other_occurrences = array();
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foreach ($specimensOrObservations as &$occurrence) {
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$typeDesignationsPager = cdm_ws_get(CDM_WS_OCCURRENCE . '/$0/specimenTypeDesignations', $occurrence->uuid);
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if (isset($typeDesignationsPager->count) && $typeDesignationsPager->count > 0) {
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$type_specimens[] = $occurrence;
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} else {
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$other_occurrences[] = $occurrence;
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}
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}
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$specimensOrObservations = array_merge($type_specimens, $other_occurrences);
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// Collect media (fieldObjectMedia, derivedUnitMedia) and add as a custom field
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// $occurrence->_fieldObjectMedia
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foreach ($specimensOrObservations as &$occurrence) {
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$occurrence->_fieldObjectMedia = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array(
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$occurrence->uuid,
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'fieldObjectMedia',
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));
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$occurrence->_derivedUnitMedia = cdm_ws_get(CDM_WS_DERIVEDUNIT_FACADE, array(
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$occurrence->uuid,
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'derivedUnitMedia',
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));
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}
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b5c89485
|
Patric Plitzner
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// --- get map service HTTP query parameters
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b8afc4bb
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Patric Plitzner
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if (count($specimensOrObservations) > 0) {
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62cd8253
|
Patric Plitzner
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$occurrence_queryDto = cdm_ws_get(CDM_WS_GEOSERVICE_OCCURRENCEMAP, $taxon->uuid, $by_associatedtaxon_query);
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b8afc4bb
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Patric Plitzner
|
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e0613197
|
Andreas Kohlbecker
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$map_visibility = variable_get(SPECIMEN_MAP_VISIBILITY, SPECIMEN_MAP_VISIBILITY_DEFAULT);
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if($map_visibility == 'always' ||
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variable_get(SPECIMEN_MAP_VISIBILITY, SPECIMEN_MAP_VISIBILITY_DEFAULT) == 'automatic' &&
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| 96 |
378bc1ce
|
Andreas Kohlbecker
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(isset($occurrence_queryDto->fieldUnitPoints[0]) || isset($occurrence_queryDto->derivedUnitPoints[0]))
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)
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{
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$occurrence_query = $occurrence_queryDto->occurrenceQuery;
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$legend_format_query = null;
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$distribution_query = NULL;
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$render_array['map'] = compose_map('specimens', $occurrence_query, $distribution_query, $legend_format_query, array());
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}
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b8afc4bb
|
Patric Plitzner
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}
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1ce9afb7
|
Patric Plitzner
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if(variable_get('cdm_dataportal_compressed_specimen_derivate_table')){
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//COMPRESSED SPECIMEN DERIVATE TABLE
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4cb163f8
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Patric Plitzner
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$associatedFieldUnitsQuery_parameters = array();
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if (isset($_REQUEST['pager']) && is_array($_REQUEST['pager'])) {
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$associatedFieldUnitsQuery_parameters = array_merge($associatedFieldUnitsQuery_parameters, $_REQUEST['pager']);
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}
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$by_associatedtaxon_query = http_build_query($associatedFieldUnitsQuery_parameters);
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2e82a602
|
Patrick Plitzner
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$pagerFieldUnits = cdm_ws_get(CDM_WS_PORTAL_TAXON,
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array($taxon->uuid, 'associatedFieldUnits'),
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$by_associatedtaxon_query . '&pageSize=' . variable_get('cdm_dataportal_compressed_specimen_derivate_table_page_size')
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);
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7d8ef9fa
|
Patric Plitzner
|
// get icon images
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9cf53dd8
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Patrick Plitzner
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$expand_icon = font_awesome_icon_markup(
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'fa-plus-square-o',
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array(
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'alt'=>'Show details',
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'class' => array('expand_icon')
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)
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);
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$collapse_icon = font_awesome_icon_markup(
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'fa-minus-square-o',
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array(
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'alt'=>'Show details',
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'class' => array('collapse_icon')
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)
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);
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1ce9afb7
|
Patric Plitzner
|
$detail_image_icon = '<img title="Detail Image" src="' . base_path() . drupal_get_path('module', 'cdm_dataportal') . '/images/detail_image_derivate-16x16-32.png' . '"/>';
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$checked_box_icon = '<img src="' . base_path() . drupal_get_path('module', 'cdm_dataportal') . '/images/step_done.gif' . '"/>';
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$sequence_icon = '<img title="Molecular Data" src="' . base_path() . drupal_get_path('module', 'cdm_dataportal') . '/images/sequence_derivate-16x16-32.png' . '"/>';
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d7e61010
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Patric Plitzner
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$character_data_icon = '<img title="Character Data" src="' . base_path() . drupal_get_path('module', 'cdm_dataportal') . '/images/character_data_derivate-16x16-32.png' . '"/>';
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4cb163f8
|
Patric Plitzner
|
if (isset($pagerFieldUnits->records[0])) {
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1ce9afb7
|
Patric Plitzner
|
$rowcount = 0;
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4cb163f8
|
Patric Plitzner
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foreach ($pagerFieldUnits->records as $fieldUnit) {
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1ce9afb7
|
Patric Plitzner
|
//get derivate hierarchy for the FieldUnit
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$derivateHierarchy = cdm_ws_get(CDM_WS_PORTAL_OCCURRENCE, array($fieldUnit->uuid, 'derivateHierarchy'), 'taxonUuid=' . $taxon->uuid);
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if($derivateHierarchy){
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//summary row
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$rows[] = array(
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'data' => array(
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b8783a48
|
Patric Plitzner
|
array(
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44eebb6f
|
Patric Plitzner
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'data' => $expand_icon . $collapse_icon,
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'class' => array('summary_row_cell', 'summary_row_icon', 'expand_column')
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b8783a48
|
Patric Plitzner
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),
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array(
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'data' => $derivateHierarchy->country,
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'class' => array('summary_row_cell')
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),
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array(
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'data' => $derivateHierarchy->date,
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'class' => array('summary_row_cell')
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),
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array(
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'data' => $derivateHierarchy->collection,
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'class' => array('summary_row_cell')
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),
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array(
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'data' => $derivateHierarchy->herbarium,
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'class' => array('summary_row_cell')
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),
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1ce9afb7
|
Patric Plitzner
|
array(
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'data' => $derivateHierarchy->hasType? $checked_box_icon:"",
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b8783a48
|
Patric Plitzner
|
'class' => array('summary_row_cell', 'summary_row_icon')
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1ce9afb7
|
Patric Plitzner
|
),
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array(
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'data' => $derivateHierarchy->hasSpecimenScan? $checked_box_icon:"",
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b8783a48
|
Patric Plitzner
|
'class' => array('summary_row_cell', 'summary_row_icon')
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1ce9afb7
|
Patric Plitzner
|
),
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b8783a48
|
Patric Plitzner
|
array(
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'data' => ($derivateHierarchy->hasDna? $sequence_icon :"")." "
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.($derivateHierarchy->hasDetailImage?$detail_image_icon:"")." "
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.($derivateHierarchy->hasCharacterData?$character_data_icon:""),
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'class' => array('summary_row_cell', 'summary_row_icon')
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)
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| 180 |
1ce9afb7
|
Patric Plitzner
|
),
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'id' => ('derivate_summary' . $rowcount), // summary row id
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'class' => array('summary_row'),
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);
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| 185 |
e3d43134
|
Patric Plitzner
|
//assemble field unit details
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$detail_html = "";
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| 187 |
7d8ef9fa
|
Patric Plitzner
|
// - taxon name
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| 188 |
e3d43134
|
Patric Plitzner
|
if (variable_get('cdm_dataportal_compressed_specimen_derivate_table_show_determined_as') && $derivateHierarchy->taxonName) {
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| 189 |
0ee2b205
|
Patrick Plitzner
|
$detail_html .= create_label("Associated with") . $derivateHierarchy->taxonName . "<br>";
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| 190 |
db390e35
|
Patric Plitzner
|
}
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| 191 |
a9ed34ad
|
Andreas Kohlbecker
|
// - protologue
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| 192 |
e3d43134
|
Patric Plitzner
|
if ($derivateHierarchy->protologue) {
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//$detail_html .= "<strong>Protologue:</strong> " . $derivateHierarchy->protologue . "<br>"
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}
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| 195 |
7d8ef9fa
|
Patric Plitzner
|
// - citation
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| 196 |
e3d43134
|
Patric Plitzner
|
if ($derivateHierarchy->citation) {
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| 197 |
3dd58832
|
Patric Plitzner
|
$detail_html .= create_label("Citation") . $derivateHierarchy->citation . "<br>";
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| 198 |
1ce9afb7
|
Patric Plitzner
|
}
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| 199 |
e3d43134
|
Patric Plitzner
|
//assemble specimen details
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| 200 |
9af9c5b3
|
Patric Plitzner
|
if($derivateHierarchy->preservedSpecimenDTOs){
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foreach($derivateHierarchy->preservedSpecimenDTOs as $preservedSpecimenDTO) {
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| 202 |
3dd58832
|
Patric Plitzner
|
$detail_html .= "<br>";
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| 203 |
30845bda
|
Andreas Kohlbecker
|
$detail_html .= render_cdm_specimen_page($preservedSpecimenDTO);
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| 204 |
9af9c5b3
|
Patric Plitzner
|
}
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| 205 |
e3d43134
|
Patric Plitzner
|
}
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| 206 |
3dd58832
|
Patric Plitzner
|
$detail_html .= "<br>";
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| 207 |
1ce9afb7
|
Patric Plitzner
|
//detail row resp. one BIG detail cell
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| 208 |
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$rows[] = array(
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| 209 |
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'data' => array(
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| 210 |
b8783a48
|
Patric Plitzner
|
array(
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| 211 |
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'data' => "", //empty first column
|
| 212 |
44eebb6f
|
Patric Plitzner
|
'class' => array('expand_column')
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| 213 |
b8783a48
|
Patric Plitzner
|
),
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| 214 |
1ce9afb7
|
Patric Plitzner
|
array(
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| 215 |
|
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'data' => $detail_html,
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| 216 |
b8783a48
|
Patric Plitzner
|
'colspan' => 7,
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| 217 |
1ce9afb7
|
Patric Plitzner
|
),
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| 218 |
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),
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| 219 |
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'id' => ('derivate_details' . $rowcount),//details row ID
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| 220 |
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'class' => array('detail_row'),
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| 221 |
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);
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| 222 |
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$rowcount++;
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| 223 |
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}
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| 224 |
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}
|
| 225 |
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}
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| 226 |
f19f47fa
|
Andreas Kohlbecker
|
|
| 227 |
1ce9afb7
|
Patric Plitzner
|
$tableId = "derivate_hierarchy_table";
|
| 228 |
|
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$derivateHierarchyTable = array(
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| 229 |
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"#theme" => "table",
|
| 230 |
|
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"#weight" => 2,
|
| 231 |
44eebb6f
|
Patric Plitzner
|
"#header" => array(
|
| 232 |
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array(
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| 233 |
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'data' => "",
|
| 234 |
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'class' => array('expand_column')
|
| 235 |
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),
|
| 236 |
f097a7d6
|
Patric Plitzner
|
"Country", "Date", "Collector + collecting number", "Herbaria", "Type", "Scan", "Derivatives"),
|
| 237 |
1ce9afb7
|
Patric Plitzner
|
"#rows" => $rows,
|
| 238 |
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"#attributes" => array(
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| 239 |
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"id" => $tableId,
|
| 240 |
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"border" => 2
|
| 241 |
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)
|
| 242 |
f19f47fa
|
Andreas Kohlbecker
|
);
|
| 243 |
|
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| 244 |
1ce9afb7
|
Patric Plitzner
|
//add toggle functionality to derivate hierarchy table
|
| 245 |
|
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drupal_add_js_rowToggle("#".$tableId);
|
| 246 |
f19f47fa
|
Andreas Kohlbecker
|
|
| 247 |
1ce9afb7
|
Patric Plitzner
|
$render_array['derivate_hierarchy_table'] = $derivateHierarchyTable;
|
| 248 |
4cb163f8
|
Patric Plitzner
|
$render_array['pager'] = markup_to_render_array(
|
| 249 |
|
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theme('cdm_pager', array(
|
| 250 |
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'pager' => $pagerFieldUnits,
|
| 251 |
|
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'path' => $_REQUEST['q'],
|
| 252 |
|
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'parameters' => $_REQUEST
|
| 253 |
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)),
|
| 254 |
|
|
10 // weight
|
| 255 |
|
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);
|
| 256 |
f19f47fa
|
Andreas Kohlbecker
|
}
|
| 257 |
1ce9afb7
|
Patric Plitzner
|
else{
|
| 258 |
|
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//BOTTOM-UP-SPECIMEN-TABLE
|
| 259 |
|
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// --- generate the specimen list as table
|
| 260 |
|
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$specimen_table = array(
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| 261 |
|
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'#theme' => 'table',
|
| 262 |
|
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'#weight' => 2,
|
| 263 |
|
|
// prefix attributes and rows with '#' to let it pass to the theme function,
|
| 264 |
|
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// otherwise it is handled as child render array
|
| 265 |
|
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'#attributes' => array('class' => 'specimens'),
|
| 266 |
|
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'#rows' => array(),
|
| 267 |
|
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);
|
| 268 |
f19f47fa
|
Andreas Kohlbecker
|
|
| 269 |
1ce9afb7
|
Patric Plitzner
|
if ($specimensOrObservations) {
|
| 270 |
|
|
|
| 271 |
|
|
foreach ($specimensOrObservations as $specimenOrObservation) {
|
| 272 |
|
|
|
| 273 |
|
|
$mediaList = array();
|
| 274 |
|
|
if (is_array($specimenOrObservation->_fieldObjectMedia)) {
|
| 275 |
|
|
$mediaList = array_merge($mediaList, $specimenOrObservation->_fieldObjectMedia);
|
| 276 |
|
|
}
|
| 277 |
|
|
if (is_array($specimenOrObservation->_derivedUnitMedia)) {
|
| 278 |
|
|
$mediaList = array_merge($mediaList, $specimenOrObservation->_derivedUnitMedia);
|
| 279 |
|
|
}
|
| 280 |
|
|
|
| 281 |
|
|
// typelabel will contain the typeStatus
|
| 282 |
|
|
$type_label = '';
|
| 283 |
|
|
$typeDesignationPager = cdm_ws_get(CDM_WS_OCCURRENCE . '/$0/specimenTypeDesignations', $specimenOrObservation->uuid);
|
| 284 |
0e533708
|
Patric Plitzner
|
if (isset($typeDesignationPager) and isset($typeDesignationPager->records)) {
|
| 285 |
1ce9afb7
|
Patric Plitzner
|
$type_status = array();
|
| 286 |
|
|
foreach ($typeDesignationPager->records as $typeDesignation) {
|
| 287 |
|
|
if (isset($typeDesignation->typeStatus->representation_L10n)){
|
| 288 |
|
|
$type_status[] = $typeDesignation->typeStatus->representation_L10n;
|
| 289 |
|
|
}
|
| 290 |
|
|
}
|
| 291 |
|
|
$type_label = implode(', ', $type_status);
|
| 292 |
|
|
if($type_label){
|
| 293 |
|
|
$type_label .= ': ' ;
|
| 294 |
|
|
}
|
| 295 |
|
|
}
|
| 296 |
|
|
|
| 297 |
|
|
// --- Specimen entry as dynamic label:
|
| 298 |
|
|
// -> Dynabox for the specimenOrObservation
|
| 299 |
|
|
$gallery_name = $specimenOrObservation->uuid;
|
| 300 |
|
|
|
| 301 |
|
|
$derived_unit_ws_request = cdm_compose_url(CDM_WS_OCCURRENCE, array( $specimenOrObservation->uuid));
|
| 302 |
|
|
$label_html = cdm_dynabox(
|
| 303 |
cea412e7
|
Andreas Kohlbecker
|
$specimenOrObservation->uuid,
|
| 304 |
|
|
$type_label . $specimenOrObservation->titleCache,
|
| 305 |
|
|
$derived_unit_ws_request,
|
| 306 |
|
|
'cdm_specimenOrObservation',
|
| 307 |
|
|
'Click for details',
|
| 308 |
|
|
array('div', 'div'),
|
| 309 |
|
|
array(),
|
| 310 |
|
|
null, // $content_element_selector
|
| 311 |
|
|
'function(){ jQuery(\'#media_gallery_' . $gallery_name . '\').hide(); }', // open_callback
|
| 312 |
|
|
'function(){ jQuery(\'#media_gallery_' . $gallery_name . '\').show(); }' // close_callback
|
| 313 |
1ce9afb7
|
Patric Plitzner
|
);
|
| 314 |
|
|
|
| 315 |
|
|
// --- Render associated media.
|
| 316 |
|
|
$gallery_html = '';
|
| 317 |
|
|
if (count($mediaList) > 0) {
|
| 318 |
|
|
$gallery_settings = getGallerySettings(CDM_DATAPORTAL_SPECIMEN_GALLERY_NAME);
|
| 319 |
|
|
$captionElements = array(
|
| 320 |
|
|
'#uri' => t('open media'),
|
| 321 |
|
|
);
|
| 322 |
|
|
|
| 323 |
a9815578
|
Andreas Kohlbecker
|
$gallery_html = compose_cdm_media_gallerie(array(
|
| 324 |
1ce9afb7
|
Patric Plitzner
|
'mediaList' => $mediaList,
|
| 325 |
|
|
'galleryName' => $gallery_name,
|
| 326 |
|
|
'maxExtend' => $gallery_settings['cdm_dataportal_media_maxextend'],
|
| 327 |
|
|
'cols' => $gallery_settings['cdm_dataportal_media_cols'],
|
| 328 |
|
|
'maxRows' => isset($gallery_settings['cdm_dataportal_media_maxRows']) ? isset($gallery_settings['cdm_dataportal_media_maxRows']) : null,
|
| 329 |
|
|
'captionElements' => $captionElements,
|
| 330 |
|
|
'mediaLinkType' => 'LIGHTBOX',
|
| 331 |
|
|
'alternativeMediaUri' => NULL,
|
| 332 |
|
|
'galleryLinkUri' => NULL,
|
| 333 |
|
|
));
|
| 334 |
|
|
}
|
| 335 |
|
|
|
| 336 |
|
|
$specimen_table['#rows'][] = array(
|
| 337 |
|
|
// An array of table rows. Every row is an array of cells, or an associative array
|
| 338 |
|
|
'data' => array(
|
| 339 |
|
|
// Each cell can be either a string or an associative array
|
| 340 |
|
|
$label_html . $gallery_html
|
| 341 |
|
|
),
|
| 342 |
|
|
'class' => array(
|
| 343 |
|
|
'descriptionElement',
|
| 344 |
|
|
'descriptionElement_IndividualsAssociation'
|
| 345 |
|
|
),
|
| 346 |
|
|
);
|
| 347 |
|
|
}
|
| 348 |
|
|
}
|
| 349 |
f19f47fa
|
Andreas Kohlbecker
|
|
| 350 |
1ce9afb7
|
Patric Plitzner
|
$render_array['specimen_list'] = $specimen_table;
|
| 351 |
|
|
$render_array['pager'] = markup_to_render_array(
|
| 352 |
|
|
theme('cdm_pager', array(
|
| 353 |
|
|
'pager' => $pager,
|
| 354 |
|
|
'path' => $_REQUEST['q'],
|
| 355 |
|
|
'parameters' => $_REQUEST,
|
| 356 |
|
|
)),
|
| 357 |
|
|
10 // weight
|
| 358 |
|
|
);
|
| 359 |
|
|
}
|
| 360 |
|
|
RenderHints::popFromRenderStack();
|
| 361 |
|
|
return $render_array;
|
| 362 |
3f259ca3
|
Andreas Kohlbecker
|
}
|
| 363 |
db390e35
|
Patric Plitzner
|
|
| 364 |
65a4de51
|
Patrick Plitzner
|
function create_html_link($link, $openInExternalWindow=false){
|
| 365 |
7d8ef9fa
|
Patric Plitzner
|
$html = "";
|
| 366 |
65a4de51
|
Patrick Plitzner
|
if($link->uri && $link->uri!=""){
|
| 367 |
|
|
$html .= '<a href="' . $link->uri . '"';
|
| 368 |
|
|
if($openInExternalWindow){
|
| 369 |
|
|
$html .= ' target="_blank"';
|
| 370 |
|
|
}
|
| 371 |
|
|
$html .= '>' . $link->linkText . '</a>';
|
| 372 |
7d8ef9fa
|
Patric Plitzner
|
}
|
| 373 |
|
|
else{
|
| 374 |
|
|
$html .= $link->linkText;
|
| 375 |
|
|
}
|
| 376 |
|
|
return $html;
|
| 377 |
|
|
}
|
| 378 |
|
|
|
| 379 |
|
|
/**
|
| 380 |
65a4de51
|
Patrick Plitzner
|
* Creates HTML links from the given link list concatenated by default by a comma.
|
| 381 |
7d8ef9fa
|
Patric Plitzner
|
* @param $linkList the list with Link objects having "uri" and "linkText" as members
|
| 382 |
|
|
* @return string the assembled HTML string containing the links
|
| 383 |
|
|
*/
|
| 384 |
65a4de51
|
Patrick Plitzner
|
function create_html_links($linkList, $openInExternalWindow=false, $separator=", ")
|
| 385 |
7d8ef9fa
|
Patric Plitzner
|
{
|
| 386 |
|
|
$html = "";
|
| 387 |
|
|
if ($linkList) {
|
| 388 |
|
|
foreach ($linkList as $link) {
|
| 389 |
65a4de51
|
Patrick Plitzner
|
$html .= create_html_link($link, $openInExternalWindow).$separator;
|
| 390 |
7d8ef9fa
|
Patric Plitzner
|
}
|
| 391 |
65a4de51
|
Patrick Plitzner
|
$html = rtrim($html, $separator);
|
| 392 |
7d8ef9fa
|
Patric Plitzner
|
}
|
| 393 |
|
|
return $html;
|
| 394 |
|
|
}
|
| 395 |
|
|
|
| 396 |
00a8e4b6
|
Andreas Kohlbecker
|
/**
|
| 397 |
|
|
* Composes a taxon page which can consist of multiple parts like
|
| 398 |
|
|
* 'General', 'Synonymy', 'Images', 'Keys'. These parts can be displayed
|
| 399 |
|
|
* as tabs or as sections of a single page.
|
| 400 |
|
|
*
|
| 401 |
|
|
* It is headed by the name of the accepted taxon without author and reference.
|
| 402 |
|
|
*
|
| 403 |
|
|
* @param $taxon
|
| 404 |
|
|
* The CDM Taxon Instance to compose the page for.
|
| 405 |
|
|
* @param $page_part
|
| 406 |
|
|
* Name of the part to display, valid values are:
|
| 407 |
|
|
* - 'description' - for the general part
|
| 408 |
|
|
* - 'images'
|
| 409 |
|
|
* - 'synonymy'
|
| 410 |
|
|
* - 'keys'
|
| 411 |
|
|
* - 'all'
|
| 412 |
|
|
*
|
| 413 |
|
|
* @return array
|
| 414 |
|
|
* A drupal render array
|
| 415 |
|
|
*
|
| 416 |
|
|
* @ingroup compose
|
| 417 |
|
|
*/
|
| 418 |
|
|
function compose_cdm_taxon_page($taxon, $page_part = 'description') {
|
| 419 |
|
|
|
| 420 |
0ae57522
|
Patric Plitzner
|
// we better cache here since drupal_get_query_parameters has no internal static cache variable
|
| 421 |
|
|
$http_request_params = drupal_get_query_parameters();
|
| 422 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 423 |
0ae57522
|
Patric Plitzner
|
// add all mandatory js sources
|
| 424 |
|
|
_add_js_footnotes();
|
| 425 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 426 |
|
|
|
| 427 |
0ae57522
|
Patric Plitzner
|
$render_array = array();
|
| 428 |
|
|
$weight = 0; // the weight for the render array elements
|
| 429 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 430 |
0ae57522
|
Patric Plitzner
|
$tabsToDisplay = variable_get('cdm_taxonpage_tabs_visibility', unserialize(TAXONPAGE_VISIBILITY_OPTIONS_DEFAULT));
|
| 431 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 432 |
0ae57522
|
Patric Plitzner
|
$page_part = variable_get('cdm_dataportal_taxonpage_tabs', 1) ? $page_part : 'all';
|
| 433 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 434 |
0ae57522
|
Patric Plitzner
|
$media = _load_media_for_taxon($taxon);
|
| 435 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 436 |
|
|
|
| 437 |
0ae57522
|
Patric Plitzner
|
if (!isset($media[0]) || ($tabsToDisplay["Images"] == '0')) {
|
| 438 |
|
|
taxon_page_tabs_hidden('images');
|
| 439 |
|
|
}
|
| 440 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 441 |
0ae57522
|
Patric Plitzner
|
// --- GET specimensOrObservations --- //
|
| 442 |
|
|
$specimensOrObservations = cdm_ws_get(CDM_WS_TAXON, array( $taxon->uuid, 'specimensOrObservations'));
|
| 443 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 444 |
0ae57522
|
Patric Plitzner
|
$specimensOrObservationsCount = is_array($specimensOrObservations) ? count($specimensOrObservations) : 0;
|
| 445 |
|
|
if ($specimensOrObservationsCount == 0 || ($tabsToDisplay["Specimens"] == '0')) {
|
| 446 |
|
|
taxon_page_tabs_hidden('specimens');
|
| 447 |
|
|
}
|
| 448 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 449 |
0ae57522
|
Patric Plitzner
|
// --- GET polytomousKeys --- //
|
| 450 |
|
|
$polytomousKeysPager = cdm_ws_get(CDM_WS_POLYTOMOUSKEY, NULL, "findByTaxonomicScope=$taxon->uuid");
|
| 451 |
|
|
$identificationKeyCount = 0;
|
| 452 |
|
|
if ($polytomousKeysPager) {
|
| 453 |
|
|
$identificationKeyCount += $polytomousKeysPager->count;
|
| 454 |
|
|
}
|
| 455 |
|
|
if ($identificationKeyCount == 0 || ($tabsToDisplay["Keys"] == '0')) {
|
| 456 |
|
|
taxon_page_tabs_hidden('keys');
|
| 457 |
|
|
}
|
| 458 |
092744e1
|
Andreas Kohlbecker
|
|
| 459 |
7663cd0b
|
Andreas Kohlbecker
|
// --- GET TaxonNodeAgentRelations --- //
|
| 460 |
|
|
$current_classification_uuid = get_current_classification_uuid();
|
| 461 |
|
|
$taxon_node_agent_relations_pager = cdm_ws_get(CDM_WS_PORTAL_TAXON_TAXONNODEAGENTRELATIONS,
|
| 462 |
|
|
array(
|
| 463 |
|
|
$taxon->uuid,
|
| 464 |
|
|
$current_classification_uuid,
|
| 465 |
|
|
),
|
| 466 |
|
|
"pageSize=1&pageIndex=0"// we are only interested into the count so we are fetching only one item, o is not possible!
|
| 467 |
|
|
);
|
| 468 |
|
|
if (!$taxon_node_agent_relations_pager || $taxon_node_agent_relations_pager->count == 0){
|
| 469 |
|
|
taxon_page_tabs_hidden('experts');
|
| 470 |
|
|
}
|
| 471 |
|
|
|
| 472 |
|
|
if ($tabsToDisplay["Synonymy"] == '0') {
|
| 473 |
0ae57522
|
Patric Plitzner
|
taxon_page_tabs_hidden('synonymy');
|
| 474 |
|
|
}
|
| 475 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 476 |
0ae57522
|
Patric Plitzner
|
// -------------------------------------------- //
|
| 477 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 478 |
0ae57522
|
Patric Plitzner
|
if (variable_get('cdm_dataportal_display_is_accepted_for', CDM_DATAPORTAL_DISPLAY_IS_ACCEPTED_FOR) && isset($_REQUEST['acceptedFor'])) {
|
| 479 |
7272d19c
|
Andreas Kohlbecker
|
$render_array['accepted_for'] = markup_to_render_array(cdm_accepted_for($_REQUEST['acceptedFor']), $weight++);
|
| 480 |
0ae57522
|
Patric Plitzner
|
}
|
| 481 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 482 |
0ae57522
|
Patric Plitzner
|
// --- PAGE PART: DESCRIPTION --- //
|
| 483 |
|
|
if ($page_part == 'description' || $page_part == 'all') {
|
| 484 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 485 |
0ae57522
|
Patric Plitzner
|
$merged_tree = merged_taxon_feature_tree($taxon);
|
| 486 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 487 |
7d8ef9fa
|
Patric Plitzner
|
|
| 488 |
0ae57522
|
Patric Plitzner
|
$render_array['general'] = compose_cdm_taxon_page_profile($taxon, $merged_tree, $media);
|
| 489 |
|
|
$render_array['general']['#weight'] = $weight++;
|
| 490 |
|
|
$render_array['general']['#prefix'] = '<div id="general" class="page-part">';
|
| 491 |
|
|
$render_array['general']['#suffix'] = '</div>';
|
| 492 |
|
|
}
|
| 493 |
7d8ef9fa
|
Patric Plitzner
|
|
| 494 |
0ae57522
|
Patric Plitzner
|
// --- PAGE PART: IMAGES --- //
|
| 495 |
|
|
if (array_search('images', taxon_page_tabs_hidden()) === FALSE && ($page_part == 'images' || $page_part == 'all')) {
|
| 496 |
|
|
$images_html = '<div id="images" class="page-part">';
|
| 497 |
|
|
if ($page_part == 'all') {
|
| 498 |
4feeabc7
|
Andreas Kohlbecker
|
$images_html .= '<h2>' . t(cdm_taxonpage_tab_label('Images')) . '</h2>';
|
| 499 |
7d8ef9fa
|
Patric Plitzner
|
}
|
| 500 |
0ae57522
|
Patric Plitzner
|
// Get the image gallery as configured by the admin.
|
| 501 |
8f4eb9ce
|
Andreas Kohlbecker
|
$default_image_gallery = 'default';
|
| 502 |
|
|
$configured_image_gallery_viewer = variable_get('image_gallery_viewer', 'default');
|
| 503 |
4feeabc7
|
Andreas Kohlbecker
|
$taxon_image_gallery = '<div class="error">No image gallery viewer configured</div>';
|
| 504 |
8f4eb9ce
|
Andreas Kohlbecker
|
if($configured_image_gallery_viewer == $default_image_gallery || $configured_image_gallery_viewer == 'fsi'){
|
| 505 |
|
|
// the fsi_gallery requires a flash plugin, in case the client browser is not supporting
|
| 506 |
|
|
// flash we also need to provide an the default gallery as alternative
|
| 507 |
|
|
$taxon_image_gallery = '<div id="default-gallery-viewer">' .
|
| 508 |
|
|
call_user_func_array('taxon_image_gallery_' . $default_image_gallery, array(
|
| 509 |
|
|
$taxon,
|
| 510 |
|
|
$media,
|
| 511 |
|
|
))
|
| 512 |
|
|
. '</div>';
|
| 513 |
|
|
}
|
| 514 |
|
|
if($configured_image_gallery_viewer == 'fsi'){
|
| 515 |
|
|
$taxon_image_gallery .= '<div id="'. $configured_image_gallery_viewer .'-gallery-viewer">' .
|
| 516 |
|
|
call_user_func_array('taxon_image_gallery_' . $configured_image_gallery_viewer, array(
|
| 517 |
|
|
$taxon,
|
| 518 |
|
|
$media,
|
| 519 |
|
|
))
|
| 520 |
|
|
. '</div>';
|
| 521 |
|
|
}
|
| 522 |
0ae57522
|
Patric Plitzner
|
$images_html .= $taxon_image_gallery;
|
| 523 |
|
|
$images_html .= '</div>';
|
| 524 |
|
|
$render_array['images'] = markup_to_render_array($images_html, $weight++);
|
| 525 |
|
|
}
|
| 526 |
7d8ef9fa
|
Patric Plitzner
|
|
| 527 |
0ae57522
|
Patric Plitzner
|
// --- PAGE PART: SYNONYMY --- //
|
| 528 |
|
|
if (($page_part == 'synonymy' || $page_part == 'all')) {
|
| 529 |
|
|
$synonymy_html = '<div id="synonymy" class="page-part">';
|
| 530 |
|
|
if ($page_part == 'all') {
|
| 531 |
4feeabc7
|
Andreas Kohlbecker
|
$synonymy_html .= '<h2>' . t(cdm_taxonpage_tab_label('Synonymy')) . '</h2>';
|
| 532 |
00a8e4b6
|
Andreas Kohlbecker
|
}
|
| 533 |
0ae57522
|
Patric Plitzner
|
$addAcceptedTaxon = variable_get('cdm_dataportal_nomref_in_title', CDM_DATAPORTAL_NOMREF_IN_TITLE);
|
| 534 |
41b4bfc9
|
Andreas Kohlbecker
|
|
| 535 |
0ae57522
|
Patric Plitzner
|
$synonymy_html .= theme('cdm_taxon_page_synonymy', array('taxon' => $taxon, 'addAcceptedTaxon' => $addAcceptedTaxon));
|
| 536 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 537 |
0ae57522
|
Patric Plitzner
|
$synonymy_html .= '</div>';
|
| 538 |
|
|
$render_array['synonymy'] = markup_to_render_array($synonymy_html, $weight++);
|
| 539 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 540 |
0ae57522
|
Patric Plitzner
|
}
|
| 541 |
00a8e4b6
|
Andreas Kohlbecker
|
|
| 542 |
0ae57522
|
Patric Plitzner
|
// --- PAGE PART: SPECIMENS --- //
|
| 543 |
|
|
if ($specimensOrObservationsCount > 0 && ($page_part == 'specimens' || $page_part == 'all')) {
|
| 544 |
|
|
$render_array['specimens'] = array(
|
| 545 |
4feeabc7
|
Andreas Kohlbecker
|
'#prefix' => '<div id="specimens" class="page-part">' . ($page_part == 'all' ? '<h2>' . t(cdm_taxonpage_tab_label('Specimens')) . '</h2>' : ''),
|
| 546 |
0ae57522
|
Patric Plitzner
|
'content' => cdm_dataportal_taxon_page_specimens($taxon), // returns render array
|
| 547 |
|
|
'#suffix' => '</div>',
|
| 548 |
|
|
);
|
| 549 |
|
|
}
|
| 550 |
|
|
|
| 551 |
|
|
// --- PAGE PART: KEYS --- //
|
| 552 |
|
|
if ($identificationKeyCount == 1 && $page_part == 'keys'){
|
| 553 |
|
|
drupal_goto(path_to_key($polytomousKeysPager->records[0]->class, $polytomousKeysPager->records[0]->uuid));
|
| 554 |
|
|
}
|
| 555 |
|
|
else if ($identificationKeyCount > 0 && ($page_part == 'keys' || $page_part == 'all')) {
|
| 556 |
|
|
$keys_html = '<div id="keys" class="page-part">';
|
| 557 |
|
|
if ($page_part == 'all') {
|
| 558 |
4feeabc7
|
Andreas Kohlbecker
|
$keys_html .= '<h2>' . t(cdm_taxonpage_tab_label('Keys')) . '</h2>';
|
| 559 |
0ae57522
|
Patric Plitzner
|
}
|
| 560 |
|
|
$keys_html .= theme('cdm_block_IdentificationKeys', array('taxonUuid' => $taxon->uuid));
|
| 561 |
|
|
$keys_html .= '</div>';
|
| 562 |
|
|
$render_array['keys'] = markup_to_render_array($keys_html, $weight++);
|
| 563 |
|
|
}
|
| 564 |
|
|
|
| 565 |
7663cd0b
|
Andreas Kohlbecker
|
// --- PAGE PART: EXPERTS --- //
|
| 566 |
|
|
|
| 567 |
|
|
if (array_search('experts', taxon_page_tabs_hidden()) === FALSE && ($page_part == 'experts' || $page_part == 'all')) {
|
| 568 |
|
|
$render_array['experts'] = array(
|
| 569 |
4feeabc7
|
Andreas Kohlbecker
|
'#prefix' => '<div id="experts" class="page-part">' . ($page_part == 'all' ? '<h2>' . t(cdm_taxonpage_tab_label('Experts')) . '</h2>' : ''),
|
| 570 |
7663cd0b
|
Andreas Kohlbecker
|
'content' => compose_cdm_taxon_page_experts($taxon), // returns render array
|
| 571 |
|
|
'#suffix' => '</div>',
|
| 572 |
|
|
);
|
| 573 |
|
|
}
|
| 574 |
|
|
|
| 575 |
|
|
// ------------------ END OF PARTS -------------- //
|
| 576 |
0ae57522
|
Patric Plitzner
|
|
| 577 |
|
|
// adjust weights of page and toc elements according to the settings
|
| 578 |
4feeabc7
|
Andreas Kohlbecker
|
$taxontabs_weights = get_array_variable_merged(CDM_TAXONPAGE_TAB_WEIGHT, CDM_TAXONPAGE_TAB_WEIGHT_DEFAULT);
|
| 579 |
0ae57522
|
Patric Plitzner
|
foreach($taxontabs_weights as $tab_key => $weight){
|
| 580 |
|
|
if(isset($render_array[$tab_key])){
|
| 581 |
|
|
$render_array[$tab_key]['#weight'] = $weight;
|
| 582 |
|
|
}
|
| 583 |
|
|
}
|
| 584 |
|
|
|
| 585 |
|
|
|
| 586 |
|
|
// set up the TOC for the pages which contain all pageparts
|
| 587 |
|
|
if($page_part == 'all') {
|
| 588 |
|
|
|
| 589 |
|
|
asort($taxontabs_weights);
|
| 590 |
|
|
foreach(array_keys($taxontabs_weights) as $tab_key){
|
| 591 |
|
|
if(isset($render_array[$tab_key])){
|
| 592 |
|
|
if($tab_key != 'general'){
|
| 593 |
|
|
// add entry for page part
|
| 594 |
|
|
$toc_elements[] = array(
|
| 595 |
4feeabc7
|
Andreas Kohlbecker
|
'data' => l(t(cdm_taxonpage_tab_label(ucfirst($tab_key))), $_GET['q'], array('fragment' => $tab_key, 'query' => $http_request_params)),
|
| 596 |
0ae57522
|
Patric Plitzner
|
'class' => array('page-part-toc-item-' . $tab_key)
|
| 597 |
|
|
);
|
| 598 |
|
|
} else {
|
| 599 |
|
|
// add content of profile part instead
|
| 600 |
|
|
if(isset($render_array['general'])) {
|
| 601 |
|
|
// in case all tabs are shown at once the feature tocs
|
| 602 |
|
|
// should be integrated into the tabs toc as sub list
|
| 603 |
|
|
// and the profile image should be on top of the page
|
| 604 |
|
|
if(isset($render_array['general']['taxon_description_feature_toc'])){;
|
| 605 |
|
|
foreach ($render_array['general']['taxon_description_feature_toc']['#items'] as $profile_toc_item){
|
| 606 |
|
|
$toc_elements[] = $profile_toc_item;
|
| 607 |
7d8ef9fa
|
Patric Plitzner
|
}
|
| 608 |
0ae57522
|
Patric Plitzner
|
unset($render_array['general']['taxon_description_feature_toc']);
|
| 609 |
|
|
}
|
| 610 |
|
|
}
|
| 611 |
7d8ef9fa
|
Patric Plitzner
|
}
|
| 612 |
0ae57522
|
Patric Plitzner
|
}
|
| 613 |
|
|
}
|
| 614 |
7d8ef9fa
|
Patric Plitzner
|
|
| 615 |
0ae57522
|
Patric Plitzner
|
// move profile image in page structure
|
| 616 |
|
|
if(isset($render_array['general']['taxon_profile_image'])){
|
| 617 |
|
|
$render_array['profile_image'] = $render_array['general']['taxon_profile_image'];
|
| 618 |
|
|
$render_array['profile_image']['#weight'] = -100;
|
| 619 |
|
|
unset($render_array['general']['taxon_profile_image']);
|
| 620 |
7d8ef9fa
|
Patric Plitzner
|
}
|
| 621 |
|
|
|
| 622 |
0ae57522
|
Patric Plitzner
|
// finally add the table of contents to the render array
|
| 623 |
|
|
$render_array['toc'] = array(
|
| 624 |
|
|
'#theme' => 'item_list',
|
| 625 |
|
|
'#items' => $toc_elements,
|
| 626 |
|
|
'#title' => t('Content'),
|
| 627 |
|
|
'#weight' => -101,
|
| 628 |
|
|
'#suffix' => '</div>',
|
| 629 |
|
|
'#prefix'=> '<div id="page-toc">'
|
| 630 |
|
|
);
|
| 631 |
|
|
}
|
| 632 |
|
|
|
| 633 |
7d8ef9fa
|
Patric Plitzner
|
|
| 634 |
0ae57522
|
Patric Plitzner
|
return $render_array;
|
| 635 |
00a8e4b6
|
Andreas Kohlbecker
|
}
|
| 636 |
|
|
|
| 637 |
1ce9afb7
|
Patric Plitzner
|
/**
|
| 638 |
22f5e82d
|
Andreas Kohlbecker
|
* TODO should this function really be a compose function?
|
| 639 |
|
|
* For a compose function must there always be a theme function with the same name? (ak 8.8.2013)
|
| 640 |
bf97c2e8
|
Andreas Kohlbecker
|
*
|
| 641 |
|
|
* composes and returns an render array containing the components of the taxon profile tab:
|
| 642 |
|
|
* - 'taxon_profile_image'
|
| 643 |
|
|
* - 'taxon_description_feature_toc'
|
| 644 |
|
|
* - 'taxon_description_features'
|
| 645 |
|
|
*
|
| 646 |
|
|
*
|
| 647 |
f78fda81
|
Andreas Kohlbecker
|
* @param taxon
|
| 648 |
|
|
* @param mergedTrees
|
| 649 |
|
|
* @param media
|
| 650 |
bf97c2e8
|
Andreas Kohlbecker
|
*
|
| 651 |
|
|
* @return array
|
| 652 |
f78fda81
|
Andreas Kohlbecker
|
* A Drupal render array with the following elements:
|
| 653 |
bf97c2e8
|
Andreas Kohlbecker
|
* - 'taxon_profile_image'
|
| 654 |
|
|
* - 'taxon_description_feature_toc'
|
| 655 |
|
|
* - 'taxon_description_features'
|
| 656 |
|
|
*
|
| 657 |
|
|
* @ingroup compose
|
| 658 |
|
|
*/
|
| 659 |
|
|
function compose_cdm_taxon_page_profile($taxon, $merged_tree, $media) {
|
| 660 |
|
|
|
| 661 |
0ae57522
|
Patric Plitzner
|
$render_array = array();
|
| 662 |
|
|
|
| 663 |
|
|
$taxon_profile_image_settings = variable_get(CDM_TAXON_PROFILE_IMAGE, unserialize(CDM_TAXON_PROFILE_IMAGE_DEFAULT));
|
| 664 |
|
|
|
| 665 |
|
|
$hide_taxon_profile_image = FALSE;
|
| 666 |
|
|
if (variable_get('image_hide_rank', '0') != '0' && isset($taxon->name->rank->uuid)) {
|
| 667 |
|
|
$rankCompare = rank_compare($taxon->name->rank->uuid, variable_get('image_hide_rank', '-99'));
|
| 668 |
|
|
$hide_taxon_profile_image = ($rankCompare > -1);
|
| 669 |
|
|
}
|
| 670 |
|
|
|
| 671 |
|
|
if ($taxon_profile_image_settings['show'] && !$hide_taxon_profile_image) {
|
| 672 |
|
|
|
| 673 |
|
|
$representationPart = new stdClass();
|
| 674 |
|
|
$attributes = array();
|
| 675 |
|
|
if (isset($media[0]->representations[0]->parts[0])) {
|
| 676 |
|
|
$representationPart = $media[0]->representations[0]->parts[0];
|
| 677 |
|
|
$attributes['alt'] = $representationPart->uri;
|
| 678 |
|
|
|
| 679 |
ca47ea76
|
Andreas Kohlbecker
|
if (!empty($taxon_profile_image_settings['media_uri_query'])) {
|
| 680 |
0ae57522
|
Patric Plitzner
|
$representationPart->uri = $representationPart->uri
|
| 681 |
ca47ea76
|
Andreas Kohlbecker
|
. (strpos($representationPart->uri, '?') !== FALSE ? '&' : '?')
|
| 682 |
|
|
. $taxon_profile_image_settings['media_uri_query'];
|
| 683 |
0ae57522
|
Patric Plitzner
|
}
|
| 684 |
|
|
}
|
| 685 |
|
|
else {
|
| 686 |
9506fd1f
|
Andreas Kohlbecker
|
if ($taxon_profile_image_settings['custom_placeholder_enabled']) {
|
| 687 |
ca47ea76
|
Andreas Kohlbecker
|
// show placeholder image instead
|
| 688 |
|
|
if (!empty($taxon_profile_image_settings['custom_placeholder_image_on']) && !empty($taxon_profile_image_settings['custom_placeholder_image_fid'])) {
|
| 689 |
|
|
// use the user provided image
|
| 690 |
|
|
$profile_image_file = file_load($taxon_profile_image_settings['custom_placeholder_image_fid']);
|
| 691 |
|
|
$url = file_create_url($profile_image_file->uri);
|
| 692 |
|
|
$image_info = image_get_info($profile_image_file->uri);
|
| 693 |
|
|
$representationPart->width = $image_info['width'];
|
| 694 |
|
|
$representationPart->height = $image_info['height'];
|
| 695 |
|
|
$representationPart->uri = $url;
|
| 696 |
|
|
}
|
| 697 |
|
|
else {
|
| 698 |
|
|
// use the hard coded default
|
| 699 |
|
|
$representationPart->width = 184;
|
| 700 |
|
|
$representationPart->height = 144;
|
| 701 |
|
|
$representationPart->uri = base_path() . drupal_get_path('module',
|
| 702 |
|
|
'cdm_dataportal') . '/images/no_picture.png';
|
| 703 |
|
|
}
|
| 704 |
|
|
$attributes['alt'] = "no image available";
|
| 705 |
0ae57522
|
Patric Plitzner
|
}
|
| 706 |
|
|
}
|
| 707 |
|
|
|
| 708 |
ca47ea76
|
Andreas Kohlbecker
|
if (isset($representationPart->uri)) {
|
| 709 |
a9815578
|
Andreas Kohlbecker
|
$profile_image = cdm_media_gallerie_image($representationPart, $taxon_profile_image_settings['maxextend'], FALSE, $attributes);
|
| 710 |
ca47ea76
|
Andreas Kohlbecker
|
// NOTE: style="width:${maxextend}px' is needed for IE8 !!!
|
| 711 |
|
|
$render_array['taxon_profile_image'] = markup_to_render_array('<div id="taxonProfileImage" style="width:' . $taxon_profile_image_settings['maxextend'] . 'px">' . $profile_image . '</div>',
|
| 712 |
|
|
-101);
|
| 713 |
|
|
}
|
| 714 |
0ae57522
|
Patric Plitzner
|
}
|
| 715 |
|
|
|
| 716 |
1b756c5f
|
Andreas Kohlbecker
|
$pseudo_feature_blocks = array();
|
| 717 |
|
|
$pseudo_feature_block_toc_items = array();
|
| 718 |
0ae57522
|
Patric Plitzner
|
|
| 719 |
|
|
|
| 720 |
1b756c5f
|
Andreas Kohlbecker
|
// Render the sections for each real feature
|
| 721 |
|
|
$feature_block_list = make_feature_block_list($merged_tree->root->childNodes, $taxon);
|
| 722 |
|
|
|
| 723 |
|
|
// Bibliography
|
| 724 |
0ae57522
|
Patric Plitzner
|
$bibliography_settings = get_bibliography_settings();
|
| 725 |
|
|
if($bibliography_settings['enabled'] == 1){
|
| 726 |
1b756c5f
|
Andreas Kohlbecker
|
$feature_bibliography = make_pseudo_feature('Bibliography', 'BIBLIOGRAPHY');
|
| 727 |
|
|
$bibliography_block = feature_block(t('Bibliography'), $feature_bibliography);
|
| 728 |
|
|
$bibliography_item = markup_to_render_array(FootnoteManager::renderFootnoteList('BIBLIOGRAPHY', ''));
|
| 729 |
|
|
$bibliography_block->content[] = compose_feature_block_wrap_elements(array($bibliography_item), $feature_bibliography);
|
| 730 |
0ae57522
|
Patric Plitzner
|
|
| 731 |
|
|
if(!empty($bibliography_block->content)){
|
| 732 |
1b756c5f
|
Andreas Kohlbecker
|
$pseudo_feature_block_toc_items['Bibliography']= 'bibliography';
|
| 733 |
|
|
$pseudo_feature_blocks[] = $bibliography_block;
|
| 734 |
0ae57522
|
Patric Plitzner
|
}
|
| 735 |
1b756c5f
|
Andreas Kohlbecker
|
}
|
| 736 |
|
|
|
| 737 |
|
|
$render_array['taxon_description_features'] = _block_get_renderable_array(
|
| 738 |
|
|
array_merge($feature_block_list, $pseudo_feature_blocks)
|
| 739 |
|
|
);
|
| 740 |
0ae57522
|
Patric Plitzner
|
|
| 741 |
1b756c5f
|
Andreas Kohlbecker
|
if($pseudo_feature_block_toc_items){
|
| 742 |
|
|
foreach ($pseudo_feature_block_toc_items as $label=>$fragment){
|
| 743 |
|
|
cdm_toc_list_add_item($label, $fragment);
|
| 744 |
|
|
}
|
| 745 |
0ae57522
|
Patric Plitzner
|
}
|
| 746 |
|
|
|
| 747 |
|
|
// create the table of content
|
| 748 |
|
|
$toc = array(
|
| 749 |
|
|
'#theme' => 'item_list',
|
| 750 |
|
|
'#items' => cdm_toc_list(),
|
| 751 |
|
|
'#title' => t('Content'),
|
| 752 |
|
|
'#weight' => -100, // move to the top
|
| 753 |
|
|
'#suffix' => '</div>',
|
| 754 |
|
|
'#prefix'=> '<div id="page-toc">'
|
| 755 |
|
|
);
|
| 756 |
|
|
$render_array['taxon_description_feature_toc'] = $toc;
|
| 757 |
|
|
|
| 758 |
|
|
return $render_array;
|
| 759 |
bf97c2e8
|
Andreas Kohlbecker
|
}
|
| 760 |
|
|
|
| 761 |
f9a3d0f6
|
Andreas Kohlbecker
|
/**
|
| 762 |
|
|
* composes and returns an render array for the experts associated with the given taxon
|
| 763 |
|
|
*
|
| 764 |
|
|
* @param taxon
|
| 765 |
|
|
*
|
| 766 |
|
|
* @return array
|
| 767 |
|
|
* A Drupal render array for a table with the experts
|
| 768 |
|
|
*
|
| 769 |
|
|
* @ingroup compose
|
| 770 |
|
|
*/
|
| 771 |
7663cd0b
|
Andreas Kohlbecker
|
function compose_cdm_taxon_page_experts($taxon){
|
| 772 |
|
|
|
| 773 |
|
|
$render_array = array();
|
| 774 |
|
|
if(!isset($taxon->uuid)){
|
| 775 |
|
|
return $render_array;
|
| 776 |
|
|
}
|
| 777 |
|
|
|
| 778 |
|
|
$current_classification_uuid = get_current_classification_uuid();
|
| 779 |
|
|
// TODO use cdm_ws_fetchall below but this failes! needs fix!
|
| 780 |
|
|
$taxon_node_agent_relations = cdm_ws_get(CDM_WS_PORTAL_TAXON_TAXONNODEAGENTRELATIONS,
|
| 781 |
|
|
array(
|
| 782 |
|
|
$taxon->uuid,
|
| 783 |
|
|
$current_classification_uuid
|
| 784 |
|
|
)
|
| 785 |
|
|
);
|
| 786 |
|
|
|
| 787 |
|
|
$header = array(
|
| 788 |
|
|
array('data' => t('Expert')),
|
| 789 |
|
|
array('data' => t('Role'))
|
| 790 |
|
|
);
|
| 791 |
|
|
$rows = array();
|
| 792 |
|
|
|
| 793 |
|
|
|
| 794 |
|
|
foreach($taxon_node_agent_relations->records as $taxon_node_agent_relation){
|
| 795 |
|
|
|
| 796 |
d9763fd3
|
Andreas Kohlbecker
|
|
| 797 |
|
|
$expert_role_id = $taxon_node_agent_relation->agent->uuid . '-' . $taxon_node_agent_relation->type->uuid;
|
| 798 |
|
|
$expert_details_container_id = 'expert_details_' . $expert_role_id;
|
| 799 |
|
|
|
| 800 |
|
|
$agent_label_markup = cdm_dynabox(
|
| 801 |
|
|
'expert_' . $expert_role_id,
|
| 802 |
|
|
$taxon_node_agent_relation->agent->titleCache,
|
| 803 |
|
|
// specifying both ends of the relationship will return only one record in the pager
|
| 804 |
|
|
cdm_compose_url(CDM_WS_PORTAL_AGENT,
|
| 805 |
|
|
array($taxon_node_agent_relation->agent->uuid, 'taxonNodeAgentRelations'),
|
| 806 |
|
|
'taxon_uuid=' . $taxon->uuid . '&relType_uuid=' . $taxon_node_agent_relation->type->uuid),
|
| 807 |
|
|
'cdm_taxon_expert',
|
| 808 |
|
|
'Click for details',
|
| 809 |
|
|
array('div', 'div'),
|
| 810 |
|
|
array(), // attributes
|
| 811 |
cea412e7
|
Andreas Kohlbecker
|
'#' . $expert_details_container_id // $content_element_selector
|
| 812 |
d9763fd3
|
Andreas Kohlbecker
|
);
|
| 813 |
|
|
|
| 814 |
|
|
// Expert and Role
|
| 815 |
|
|
$rows[] = array(
|
| 816 |
|
|
'data' => array(
|
| 817 |
|
|
array(
|
| 818 |
|
|
'data' => $agent_label_markup,
|
| 819 |
|
|
'class' => array(html_class_attribute_ref($taxon_node_agent_relation->agent))
|
| 820 |
7663cd0b
|
Andreas Kohlbecker
|
),
|
| 821 |
d9763fd3
|
Andreas Kohlbecker
|
array(
|
| 822 |
|
|
'data' => $taxon_node_agent_relation->type->representation_L10n,
|
| 823 |
|
|
'class' => array(html_class_attribute_ref($taxon_node_agent_relation->type))
|
| 824 |
|
|
)
|
| 825 |
|
|
)
|
| 826 |
|
|
);
|
| 827 |
|
|
// Agent details
|
| 828 |
|
|
$rows[] = array(
|
| 829 |
|
|
'data' => array(
|
| 830 |
|
|
array(
|
| 831 |
|
|
'data' => '<!-- expert_details_container -->',
|
| 832 |
|
|
'id' => $expert_details_container_id,
|
| 833 |
|
|
'colspan' => 2
|
| 834 |
|
|
)
|
| 835 |
|
|
)
|
| 836 |
7663cd0b
|
Andreas Kohlbecker
|
);
|
| 837 |
d9763fd3
|
Andreas Kohlbecker
|
|
| 838 |
7663cd0b
|
Andreas Kohlbecker
|
}
|
| 839 |
|
|
|
| 840 |
|
|
|
| 841 |
|
|
$render_array['experts_table'] = array(
|
| 842 |
|
|
'#theme' => 'table',
|
| 843 |
|
|
'#header' => $header,
|
| 844 |
|
|
'#rows' => $rows,
|
| 845 |
|
|
);
|
| 846 |
|
|
|
| 847 |
|
|
|
| 848 |
|
|
return $render_array;
|
| 849 |
|
|
}
|
| 850 |
|
|
|
| 851 |
bf97c2e8
|
Andreas Kohlbecker
|
|
| 852 |
3f259ca3
|
Andreas Kohlbecker
|
/**
|
| 853 |
7663cd0b
|
Andreas Kohlbecker
|
* Manages the tabs to be hidden in the taxon page.
|
| 854 |
3f259ca3
|
Andreas Kohlbecker
|
*
|
| 855 |
|
|
* The tabs are identified by their last menu link path element:
|
| 856 |
|
|
* - description
|
| 857 |
|
|
* - synonymy
|
| 858 |
|
|
* - images
|
| 859 |
|
|
* - specimens
|
| 860 |
|
|
* - key
|
| 861 |
|
|
*
|
| 862 |
|
|
* Internally the tabs are stored in a static variable which is
|
| 863 |
|
|
* managed by drupal_static().
|
| 864 |
|
|
*
|
| 865 |
|
|
* @param string $add_tab
|
| 866 |
7663cd0b
|
Andreas Kohlbecker
|
* Optional parameter. The given string will be added to the array of tabs
|
| 867 |
3f259ca3
|
Andreas Kohlbecker
|
*
|
| 868 |
|
|
* @return
|
| 869 |
|
|
* The array of tabs
|
| 870 |
|
|
*/
|
| 871 |
|
|
function taxon_page_tabs_hidden($add_tab = NULL) {
|
| 872 |
0ae57522
|
Patric Plitzner
|
$tabs = &drupal_static(__FUNCTION__);
|
| 873 |
3f259ca3
|
Andreas Kohlbecker
|
|
| 874 |
0ae57522
|
Patric Plitzner
|
if(!isset($tabs)){
|
| 875 |
|
|
$tabs = array();
|
| 876 |
|
|
}
|
| 877 |
3f259ca3
|
Andreas Kohlbecker
|
|
| 878 |
0ae57522
|
Patric Plitzner
|
if (isset($add_tab) && !array_key_exists($add_tab, $tabs)) {
|
| 879 |
|
|
$tabs[] = $add_tab;
|
| 880 |
|
|
}
|
| 881 |
3f259ca3
|
Andreas Kohlbecker
|
|
| 882 |
0ae57522
|
Patric Plitzner
|
return $tabs;
|
| 883 |
3f259ca3
|
Andreas Kohlbecker
|
}
|
| 884 |
|
|
|
| 885 |
|
|
/**
|
| 886 |
|
|
* Implements the hook_preprocess_HOOK() for theme_menu_local_tasks()
|
| 887 |
|
|
*
|
| 888 |
9438ad3a
|
Andreas Kohlbecker
|
* - Removes the tabs to be hidden, @see taxon_page_tabs_hidden()
|
| 889 |
|
|
* - Renames tabs according to the settings // TODO (this will replace the theme_cdm_taxonpage_tab() function !!!)
|
| 890 |
3f259ca3
|
Andreas Kohlbecker
|
*
|
| 891 |
|
|
* @param array $variables
|
| 892 |
|
|
* The variables array
|
| 893 |
|
|
*/
|
| 894 |
|
|
function cdm_dataportal_preprocess_menu_local_tasks(&$variables) {
|
| 895 |
|
|
|
| 896 |
0ae57522
|
Patric Plitzner
|
$hidden_tabs = taxon_page_tabs_hidden();
|
| 897 |
3f259ca3
|
Andreas Kohlbecker
|
|
| 898 |
0ae57522
|
Patric Plitzner
|
if (is_array($variables['primary'])) {
|
| 899 |
|
|
foreach ($variables['primary'] as $key => &$element) {
|
| 900 |
6f1a217c
|
Andreas Kohlbecker
|
|
| 901 |
0ae57522
|
Patric Plitzner
|
// 1. Remove the tabs to be hidden
|
| 902 |
|
|
foreach ($hidden_tabs as $tab) {
|
| 903 |
|
|
if ($element['#link']['path'] == 'cdm_dataportal/taxon/%/' . $tab) {
|
| 904 |
|
|
// remove the tab
|
| 905 |
|
|
unset($variables['primary'][$key]);
|
| 906 |
9438ad3a
|
Andreas Kohlbecker
|
}
|
| 907 |
0ae57522
|
Patric Plitzner
|
}
|
| 908 |
3f259ca3
|
Andreas Kohlbecker
|
}
|
| 909 |
0ae57522
|
Patric Plitzner
|
}
|
| 910 |
6f1a217c
|
Andreas Kohlbecker
|
}
|
| 911 |
|
|
|
| 912 |
|
|
|
| 913 |
|
|
|
| 914 |
|
|
/**
|
| 915 |
|
|
* Implements the hook_preprocess_HOOK() for theme_menu_local_task()
|
| 916 |
|
|
*
|
| 917 |
|
|
*
|
| 918 |
|
|
* @param array $variables
|
| 919 |
|
|
* An associative array containing:
|
| 920 |
|
|
* - element: A render element containing:
|
| 921 |
|
|
* #link: A menu link array with 'title', 'href', and 'localized_options' keys.
|
| 922 |
|
|
* #active: A boolean indicating whether the local task is active.
|
| 923 |
|
|
*
|
| 924 |
|
|
*/
|
| 925 |
|
|
function cdm_dataportal_preprocess_menu_local_task(&$variables) {
|
| 926 |
|
|
|
| 927 |
0ae57522
|
Patric Plitzner
|
$link = $variables['element']['#link'];
|
| 928 |
|
|
if (preg_match('/cdm_dataportal\/.*\/refresh$/', $link['href'])) {
|
| 929 |
|
|
$link['title'] = '<img class="refresh" src="' . base_path() . drupal_get_path('module', 'cdm_dataportal') . '/images/view-refresh.png' . '" alt="' . check_plain($link['title']) . '" title="' . check_plain($link['title']) . '"/>';
|
| 930 |
|
|
$link['localized_options']['html'] = TRUE;
|
| 931 |
6f1a217c
|
Andreas Kohlbecker
|
|
| 932 |
0ae57522
|
Patric Plitzner
|
$variables['element']['#link'] = $link;
|
| 933 |
|
|
}
|
| 934 |
f19f47fa
|
Andreas Kohlbecker
|
}
|
| 935 |
f9a3d0f6
|
Andreas Kohlbecker
|
|
| 936 |
|
|
/* =================== block composition ===================== */
|
| 937 |
|
|
|
| 938 |
|
|
/**
|
| 939 |
23ad16a1
|
Andreas Kohlbecker
|
* Composes and returns an render array for the classification breadcrumbs of the given taxon.
|
| 940 |
f9a3d0f6
|
Andreas Kohlbecker
|
*
|
| 941 |
|
|
* @param taxon
|
| 942 |
|
|
*
|
| 943 |
|
|
* @return array
|
| 944 |
|
|
* A Drupal render array for a table with the experts
|
| 945 |
|
|
*
|
| 946 |
|
|
* @ingroup compose
|
| 947 |
|
|
*/
|
| 948 |
|
|
function compose_classification_breadcrumbs($taxon_uuid) {
|
| 949 |
|
|
|
| 950 |
b0adfd32
|
Andreas Kohlbecker
|
_add_js_taxonomic_children('#classification-breadcrumbs .taxonomic-children-button');
|
| 951 |
d0d23caa
|
Andreas Kohlbecker
|
|
| 952 |
f9a3d0f6
|
Andreas Kohlbecker
|
$render_array = array();
|
| 953 |
|
|
|
| 954 |
|
|
$render_array['#theme'] = 'item_list';
|
| 955 |
|
|
$render_array['#type'] = 'ul';
|
| 956 |
|
|
$render_array['#attributes'] = array(
|
| 957 |
|
|
'id' => 'classification-breadcrumbs',
|
| 958 |
|
|
'class' => 'breadcrumbs inline',
|
| 959 |
|
|
);
|
| 960 |
|
|
|
| 961 |
|
|
$items = array();
|
| 962 |
|
|
|
| 963 |
38da4e54
|
Andreas Kohlbecker
|
$parent_taxon_nodes = null;
|
| 964 |
|
|
if($taxon_uuid){
|
| 965 |
|
|
$parent_taxon_nodes = cdm_ws_taxonomy_pathFromRoot($taxon_uuid);
|
| 966 |
|
|
}
|
| 967 |
f9a3d0f6
|
Andreas Kohlbecker
|
|
| 968 |
38da4e54
|
Andreas Kohlbecker
|
$classifications = cdm_ws_fetch_all(CDM_WS_PORTAL_TAXONOMY);
|
| 969 |
|
|
// find current classification in list
|
| 970 |
|
|
$classification = null;
|
| 971 |
|
|
$current_classification_uuid = get_current_classification_uuid();
|
| 972 |
|
|
foreach ($classifications as $classification){
|
| 973 |
|
|
if($classification->uuid == $current_classification_uuid){
|
| 974 |
|
|
break;
|
| 975 |
b0adfd32
|
Andreas Kohlbecker
|
}
|
| 976 |
38da4e54
|
Andreas Kohlbecker
|
}
|
| 977 |
b0adfd32
|
Andreas Kohlbecker
|
|
| 978 |
38da4e54
|
Andreas Kohlbecker
|
$node_name = '';
|
| 979 |
|
|
if(count($classifications) > 1 ){
|
| 980 |
|
|
// need to add the current classification as first label
|
| 981 |
0af3ce28
|
Andreas Kohlbecker
|
|
| 982 |
|
|
$label = $classification->titleCache;
|
| 983 |
|
|
if(strlen($label) > 20){
|
| 984 |
|
|
$label = substr($label, 0, strpos($label, ' ', 15)) . '...';
|
| 985 |
|
|
}
|
| 986 |
|
|
$node_name = font_awesome_icon_markup('fa-th-list') . ' ' . l($label, '#', array(
|
| 987 |
|
|
'attributes' => array(
|
| 988 |
|
|
'class' => 'taxonomic-children-button classification-chooser',
|
| 989 |
|
|
'data-destination-uri' => drupal_get_destination(),
|
| 990 |
|
|
'data-cdm-align-with' => array('prev')
|
| 991 |
|
|
),
|
| 992 |
|
|
'html' => true
|
| 993 |
|
|
));
|
| 994 |
f9a3d0f6
|
Andreas Kohlbecker
|
}
|
| 995 |
b0adfd32
|
Andreas Kohlbecker
|
|
| 996 |
38da4e54
|
Andreas Kohlbecker
|
$rank_limit_uuid = variable_get(TAXONTREE_RANKLIMIT, TAXONTREE_RANKLIMIT_DEFAULT);
|
| 997 |
0af3ce28
|
Andreas Kohlbecker
|
|
| 998 |
|
|
$rank_separator = '<span> '
|
| 999 |
38da4e54
|
Andreas Kohlbecker
|
. font_awesome_icon_markup('fa-chevron-right')
|
| 1000 |
|
|
. ' </span>';
|
| 1001 |
0af3ce28
|
Andreas Kohlbecker
|
$more_children_icon = font_awesome_icon_markup('fa-sitemap fa-rotate-270');
|
| 1002 |
69fb3dbb
|
Andreas Kohlbecker
|
$more_children_label = '...';
|
| 1003 |
38da4e54
|
Andreas Kohlbecker
|
|
| 1004 |
0af3ce28
|
Andreas Kohlbecker
|
$items[] = $node_name;
|
| 1005 |
38da4e54
|
Andreas Kohlbecker
|
|
| 1006 |
0af3ce28
|
Andreas Kohlbecker
|
$more_children_for = null;
|
| 1007 |
e3235962
|
Andreas Kohlbecker
|
if($parent_taxon_nodes){
|
| 1008 |
0af3ce28
|
Andreas Kohlbecker
|
foreach ($parent_taxon_nodes as $node) {
|
| 1009 |
38da4e54
|
Andreas Kohlbecker
|
|
| 1010 |
|
|
$is_first_item = count($items) == 0;
|
| 1011 |
0af3ce28
|
Andreas Kohlbecker
|
$is_last_item = count($items) == count($parent_taxon_nodes);
|
| 1012 |
38da4e54
|
Andreas Kohlbecker
|
$node_name = cdm_dataportal_shortname_of($node);
|
| 1013 |
|
|
$path = path_to_taxon($node->taxonUuid);
|
| 1014 |
|
|
|
| 1015 |
0af3ce28
|
Andreas Kohlbecker
|
if($node->taxonomicChildrenCount > 0) {
|
| 1016 |
|
|
$more_children_for = $node->taxonUuid;
|
| 1017 |
|
|
} else {
|
| 1018 |
|
|
$more_children_for = null;
|
| 1019 |
38da4e54
|
Andreas Kohlbecker
|
}
|
| 1020 |
|
|
|
| 1021 |
0af3ce28
|
Andreas Kohlbecker
|
// 'fa-sitemap'
|
| 1022 |
|
|
|
| 1023 |
38da4e54
|
Andreas Kohlbecker
|
$items[] =
|
| 1024 |
0af3ce28
|
Andreas Kohlbecker
|
($is_first_item ? '' : ' ')
|
| 1025 |
|
|
. $rank_separator
|
| 1026 |
|
|
. l(
|
| 1027 |
4b3be949
|
Andreas Kohlbecker
|
'<span class="' . html_class_attribute_ref($node) . '">' . $node_name . '</span>',
|
| 1028 |
0af3ce28
|
Andreas Kohlbecker
|
$path,
|
| 1029 |
|
|
array(
|
| 1030 |
|
|
'attributes' => array(
|
| 1031 |
|
|
'class' => array('taxonomic-children-button'),
|
| 1032 |
|
|
'data-cdm-taxon-uuid' => array($node->taxonUuid),
|
| 1033 |
|
|
'data-cdm-classification-mode' => array('siblings'),
|
| 1034 |
|
|
'data-cdm-align-with' => array('prev')
|
| 1035 |
4b3be949
|
Andreas Kohlbecker
|
),
|
| 1036 |
|
|
'html' => true
|
| 1037 |
0af3ce28
|
Andreas Kohlbecker
|
)
|
| 1038 |
|
|
);
|
| 1039 |
|
|
}
|
| 1040 |
38da4e54
|
Andreas Kohlbecker
|
}
|
| 1041 |
0af3ce28
|
Andreas Kohlbecker
|
|
| 1042 |
|
|
// add more button to the end
|
| 1043 |
|
|
if(!$parent_taxon_nodes) {
|
| 1044 |
|
|
// not taxon focused yet, adding button to make the root nodes available
|
| 1045 |
69fb3dbb
|
Andreas Kohlbecker
|
$items[] = '<span>'
|
| 1046 |
|
|
. $more_children_icon . ' ' .
|
| 1047 |
|
|
'<span class="taxonomic-children-button" data-classification-uuid="' . $current_classification_uuid
|
| 1048 |
53c705d4
|
Andreas Kohlbecker
|
. '" data-rank-limit-uuid="' . $rank_limit_uuid . '" data-cdm-align-with="prev"> ' . $more_children_label . '<span>'
|
| 1049 |
69fb3dbb
|
Andreas Kohlbecker
|
. '</span>';
|
| 1050 |
0af3ce28
|
Andreas Kohlbecker
|
} else if($more_children_for){
|
| 1051 |
|
|
// last parent item has child taxon nodes
|
| 1052 |
69fb3dbb
|
Andreas Kohlbecker
|
$items[] = ' <span>'
|
| 1053 |
|
|
. $more_children_icon . ' ' .
|
| 1054 |
|
|
'<span class="taxonomic-children-button" data-cdm-taxon-uuid="' .$more_children_for
|
| 1055 |
53c705d4
|
Andreas Kohlbecker
|
. '" data-cdm-classification-mode="children" data-cdm-align-with="prev"> ' . $more_children_label . '</span>'
|
| 1056 |
69fb3dbb
|
Andreas Kohlbecker
|
. '</span>';
|
| 1057 |
0af3ce28
|
Andreas Kohlbecker
|
|
| 1058 |
e3235962
|
Andreas Kohlbecker
|
}
|
| 1059 |
b0adfd32
|
Andreas Kohlbecker
|
|
| 1060 |
30845bda
|
Andreas Kohlbecker
|
$render_array['#items'] = $items;
|
| 1061 |
0af3ce28
|
Andreas Kohlbecker
|
|
| 1062 |
30845bda
|
Andreas Kohlbecker
|
return $render_array;
|
| 1063 |
|
|
}
|
| 1064 |
0af3ce28
|
Andreas Kohlbecker
|
|
| 1065 |
69fb3dbb
|
Andreas Kohlbecker
|
|
| 1066 |
30845bda
|
Andreas Kohlbecker
|
/**
|
| 1067 |
|
|
* @param $specimen_uuid
|
| 1068 |
|
|
* @return array
|
| 1069 |
|
|
* The drupal render array for the page
|
| 1070 |
|
|
*
|
| 1071 |
|
|
* @ingroup compose
|
| 1072 |
|
|
*/
|
| 1073 |
|
|
function compose_cdm_specimen_page($specimen_uuid)
|
| 1074 |
|
|
{
|
| 1075 |
|
|
drupal_set_title("Specimen Details");
|
| 1076 |
|
|
$specimen = cdm_ws_get(CDM_WS_PORTAL_OCCURRENCE, array($specimen_uuid, 'specimenDerivates'));
|
| 1077 |
|
|
|
| 1078 |
|
|
$render_array = array();
|
| 1079 |
|
|
RenderHints::pushToRenderStack('specimen_page');
|
| 1080 |
f9a3d0f6
|
Andreas Kohlbecker
|
|
| 1081 |
30845bda
|
Andreas Kohlbecker
|
$detail_html = render_cdm_specimen_page($specimen, true);
|
| 1082 |
|
|
$render_array['specimen_html'] = array(
|
| 1083 |
|
|
'#markup' => $detail_html
|
| 1084 |
|
|
);
|
| 1085 |
|
|
|
| 1086 |
|
|
RenderHints::popFromRenderStack();
|
| 1087 |
f9a3d0f6
|
Andreas Kohlbecker
|
return $render_array;
|
| 1088 |
30845bda
|
Andreas Kohlbecker
|
}
|
| 1089 |
f9a3d0f6
|
Andreas Kohlbecker
|
|
| 1090 |
30845bda
|
Andreas Kohlbecker
|
/**
|
| 1091 |
|
|
* @param $named_area_uuid
|
| 1092 |
|
|
* @return array
|
| 1093 |
|
|
* The drupal render array for the page
|
| 1094 |
|
|
*
|
| 1095 |
|
|
* @ingroup compose
|
| 1096 |
|
|
*/
|
| 1097 |
|
|
function compose_cdm_named_area_page($named_area_uuid)
|
| 1098 |
|
|
{
|
| 1099 |
|
|
|
| 1100 |
|
|
$named_area = cdm_ws_get(CDM_WS_PORTAL_TERM, array($named_area_uuid));
|
| 1101 |
|
|
|
| 1102 |
|
|
$render_array = array();
|
| 1103 |
|
|
RenderHints::pushToRenderStack('named_area_page');
|
| 1104 |
|
|
|
| 1105 |
|
|
$groups = array();
|
| 1106 |
|
|
@_description_list_group_add($groups, t('Name') . ':', $named_area->representation_L10n);
|
| 1107 |
|
|
@_description_list_group_add($groups, t('IdInVocabulary') . ':', $named_area->idInVocabulary);
|
| 1108 |
|
|
if(isset($named_area->level)) {
|
| 1109 |
|
|
@_description_list_group_add($groups, t('Level') . ':', $named_area->level->representation_L10n);
|
| 1110 |
|
|
}
|
| 1111 |
|
|
|
| 1112 |
|
|
$name_area_details_elements = array(
|
| 1113 |
|
|
// '#title' => $title,
|
| 1114 |
|
|
'#theme' => 'description_list',
|
| 1115 |
|
|
'#groups' => $groups,
|
| 1116 |
|
|
'#attributes' => array('class' => html_class_attribute_ref($named_area)),
|
| 1117 |
|
|
);
|
| 1118 |
|
|
|
| 1119 |
|
|
$render_array[] = $name_area_details_elements;
|
| 1120 |
|
|
|
| 1121 |
|
|
RenderHints::popFromRenderStack();
|
| 1122 |
|
|
return $render_array;
|
| 1123 |
f9a3d0f6
|
Andreas Kohlbecker
|
}
|
| 1124 |
4feeabc7
|
Andreas Kohlbecker
|
|
| 1125 |
|
|
/**
|
| 1126 |
|
|
* Provides the the label string for taxon page tabs.
|
| 1127 |
|
|
*
|
| 1128 |
|
|
* The $tabname as passed to the method will be returned if no override
|
| 1129 |
|
|
* label is configured in the settings.
|
| 1130 |
|
|
*/
|
| 1131 |
|
|
function cdm_taxonpage_tab_label($tabname) {
|
| 1132 |
|
|
static $taxon_tabs_labels = null;
|
| 1133 |
|
|
if($taxon_tabs_labels == null){
|
| 1134 |
|
|
$taxon_tabs_labels = get_array_variable_merged(CDM_TAXONPAGE_TAB_LABELS, CDM_TAXONPAGE_TAB_LABELS_DEFAULT);
|
| 1135 |
|
|
}
|
| 1136 |
|
|
$tabname_key = strtolower($tabname);
|
| 1137 |
|
|
if(isset($taxon_tabs_labels[$tabname_key]) && $taxon_tabs_labels[$tabname_key]){
|
| 1138 |
|
|
return $taxon_tabs_labels[$tabname_key];
|
| 1139 |
|
|
}
|
| 1140 |
|
|
return $tabname;
|
| 1141 |
|
|
}
|