EDIT: Issueshttps://dev.e-taxonomy.eu/redmine/https://dev.e-taxonomy.eu/redmine/redmine/favicon.ico?14691914852023-12-19T13:39:31ZEDIT Project Management
Redmine task #10444 (New): Add integration test with dockerhttps://dev.e-taxonomy.eu/redmine/issues/104442023-12-19T13:39:31ZAndreas Müller
<p>"Als Werkzeug für Integrationstests mit Docker hat sich die Java-Bibliothek Testcontainers in den vergangenen Jahren einen festen Platz in der Developer-Community erobert. Nachdem das Projekt laut der Docker-Verantwortlichen im laufenden Jahr zu den wachstumsstärksten auf Docker Hub avanciert war, hat Docker die Übernahme von AtomicJar angekündigt – dem Unternehmen hinter Testcontainers."</p>
<p><a href="https://www.docker.com/blog/docker-whale-comes-atomicjar-maker-of-testcontainers/">https://www.docker.com/blog/docker-whale-comes-atomicjar-maker-of-testcontainers/</a></p>
task #9968 (New): Add test/monit for testing if utis is runninghttps://dev.e-taxonomy.eu/redmine/issues/99682022-03-11T11:27:31ZAndreas Müller
<p>Same for mapproxy.</p>
<p><a href="https://cybertaxonomy.org/eu-bon/utis/1.3/">https://cybertaxonomy.org/eu-bon/utis/1.3/</a></p>
<p><a href="https://geo.cybertaxonomy.org/mapproxy/">https://geo.cybertaxonomy.org/mapproxy/</a></p>
<p>Note: a reason for not running is usually that the docker container failed to start.</p>
<pre>docker start <container_name> OR <container_id>
docker ps -a (to retrieve id)
</pre> bug #8132 (Worksforme): phycobank cdm-server instance problems with db connections https://dev.e-taxonomy.eu/redmine/issues/81322019-02-22T17:38:31ZAndreas Kohlbecker
<p>the phycobank cdm-server instance which is running in a docker container got problems with the db connections </p>
<p>Problem accessing /phycobank/registrationDTO/identifier/http%3A%2F%2Fphycobank.org%2F100530.json. Reason:</p>
<pre>com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: The last packet successfully received from the server was 89,950,095 milliseconds ago. The last packet sent successfully to the server was 89,950,096 milliseconds ago. is longer than the server configured value of 'wait_timeout'. You should consider either expiring and/or testing connection validity before use in your application, increasing the server configured values for client timeouts, or using the Connector/J connection property 'autoReconnect=true' to avoid this problem.
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at com.mysql.jdbc.Util.handleNewInstance(Util.java:404)
at com.mysql.jdbc.SQLError.createCommunicationsException(SQLError.java:981)
at com.mysql.jdbc.MysqlIO.send(MysqlIO.java:3652)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2460)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2625)
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2551)
at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:1861)
at com.mysql.jdbc.PreparedStatement.executeQuery(PreparedStatement.java:1962)
at com.mchange.v2.c3p0.impl.NewProxyPreparedStatement.executeQuery(NewProxyPreparedStatement.java:353)
at org.hibernate.engine.jdbc.internal.ResultSetReturnImpl.extract(ResultSetReturnImpl.java:70)
at org.hibernate.loader.Loader.getResultSet(Loader.java:2116)
at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1899)
at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1875)
at org.hibernate.loader.Loader.doQuery(Loader.java:919)
at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:336)
at org.hibernate.loader.Loader.doList(Loader.java:2611)
at org.hibernate.loader.Loader.doList(Loader.java:2594)
at org.hibernate.loader.Loader.listIgnoreQueryCache(Loader.java:2423)
at org.hibernate.loader.Loader.list(Loader.java:2418)
at org.hibernate.loader.criteria.CriteriaLoader.list(CriteriaLoader.java:109)
at org.hibernate.internal.SessionImpl.list(SessionImpl.java:1774)
at org.hibernate.internal.CriteriaImpl.list(CriteriaImpl.java:363)
at org.hibernate.internal.CriteriaImpl.uniqueResult(CriteriaImpl.java:385)
at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmEntityDaoBase.countByParamWithRestrictions(CdmEntityDaoBase.java:1197)
at eu.etaxonomy.cdm.persistence.dao.hibernate.common.IdentifiableDaoBase.countByTitleWithRestrictions(IdentifiableDaoBase.java:344)
at eu.etaxonomy.cdm.api.service.IdentifiableServiceBase.findByTitleWithRestrictions(IdentifiableServiceBase.java:147)
at sun.reflect.GeneratedMethodAccessor189.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:281)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
at com.sun.proxy.$Proxy187.findByTitleWithRestrictions(Unknown Source)
at eu.etaxonomy.cdm.service.CdmFilterablePagingProvider.size(CdmFilterablePagingProvider.java:182)
at org.vaadin.viritin.fields.LazyComboBox$7.size(LazyComboBox.java:261)
at org.vaadin.viritin.LazyList.size(LazyList.java:229)
at org.vaadin.viritin.ListContainer.size(ListContainer.java:368)
at com.vaadin.ui.ComboBox.getOptionsWithFilter(ComboBox.java:461)
at com.vaadin.ui.ComboBox.paintContent(ComboBox.java:261)
at com.vaadin.server.LegacyPaint.paint(LegacyPaint.java:65)
at com.vaadin.server.communication.LegacyUidlWriter.write(LegacyUidlWriter.java:82)
at com.vaadin.server.communication.UidlWriter.write(UidlWriter.java:143)
at com.vaadin.server.communication.UidlRequestHandler.writeUidl(UidlRequestHandler.java:124)
at com.vaadin.server.communication.UidlRequestHandler.synchronizedHandleRequest(UidlRequestHandler.java:92)
at com.vaadin.server.SynchronizedRequestHandler.handleRequest(SynchronizedRequestHandler.java:41)
at com.vaadin.server.VaadinService.handleRequest(VaadinService.java:1435)
at com.vaadin.server.VaadinServlet.service(VaadinServlet.java:380)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:808)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:316)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:126)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:90)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:122)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:111)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:169)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:48)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:158)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.oauth2.provider.authentication.OAuth2AuthenticationProcessingFilter.doFilter(OAuth2AuthenticationProcessingFilter.java:176)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:120)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:64)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:91)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:53)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:213)
at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:176)
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:262)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:121)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
at org.eclipse.jetty.server.Server.handle(Server.java:497)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:257)
at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)
at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.net.SocketException: Broken pipe (Write failed)
at java.net.SocketOutputStream.socketWrite0(Native Method)
at java.net.SocketOutputStream.socketWrite(SocketOutputStream.java:111)
at java.net.SocketOutputStream.write(SocketOutputStream.java:155)
at java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:82)
at java.io.BufferedOutputStream.flush(BufferedOutputStream.java:140)
at com.mysql.jdbc.MysqlIO.send(MysqlIO.java:3634)
... 107 more
Caused by:
java.net.SocketException: Broken pipe (Write failed)
at java.net.SocketOutputStream.socketWrite0(Native Method)
at java.net.SocketOutputStream.socketWrite(SocketOutputStream.java:111)
at java.net.SocketOutputStream.write(SocketOutputStream.java:155)
at java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:82)
at java.io.BufferedOutputStream.flush(BufferedOutputStream.java:140)
at com.mysql.jdbc.MysqlIO.send(MysqlIO.java:3634)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2460)
at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2625)
at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2551)
at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:1861)
at com.mysql.jdbc.PreparedStatement.executeQuery(PreparedStatement.java:1962)
at com.mchange.v2.c3p0.impl.NewProxyPreparedStatement.executeQuery(NewProxyPreparedStatement.java:353)
at org.hibernate.engine.jdbc.internal.ResultSetReturnImpl.extract(ResultSetReturnImpl.java:70)
at org.hibernate.loader.Loader.getResultSet(Loader.java:2116)
at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1899)
at org.hibernate.loader.Loader.executeQueryStatement(Loader.java:1875)
at org.hibernate.loader.Loader.doQuery(Loader.java:919)
at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:336)
at org.hibernate.loader.Loader.doList(Loader.java:2611)
at org.hibernate.loader.Loader.doList(Loader.java:2594)
at org.hibernate.loader.Loader.listIgnoreQueryCache(Loader.java:2423)
at org.hibernate.loader.Loader.list(Loader.java:2418)
at org.hibernate.loader.criteria.CriteriaLoader.list(CriteriaLoader.java:109)
at org.hibernate.internal.SessionImpl.list(SessionImpl.java:1774)
at org.hibernate.internal.CriteriaImpl.list(CriteriaImpl.java:363)
at org.hibernate.internal.CriteriaImpl.uniqueResult(CriteriaImpl.java:385)
at eu.etaxonomy.cdm.persistence.dao.hibernate.common.CdmEntityDaoBase.countByParamWithRestrictions(CdmEntityDaoBase.java:1197)
at eu.etaxonomy.cdm.persistence.dao.hibernate.common.IdentifiableDaoBase.countByTitleWithRestrictions(IdentifiableDaoBase.java:344)
at eu.etaxonomy.cdm.api.service.IdentifiableServiceBase.findByTitleWithRestrictions(IdentifiableServiceBase.java:147)
at sun.reflect.GeneratedMethodAccessor189.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:302)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:190)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:157)
at org.springframework.transaction.interceptor.TransactionInterceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:281)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:96)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:179)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:208)
at com.sun.proxy.$Proxy187.findByTitleWithRestrictions(Unknown Source)
at eu.etaxonomy.cdm.service.CdmFilterablePagingProvider.size(CdmFilterablePagingProvider.java:182)
at org.vaadin.viritin.fields.LazyComboBox$7.size(LazyComboBox.java:261)
at org.vaadin.viritin.LazyList.size(LazyList.java:229)
at org.vaadin.viritin.ListContainer.size(ListContainer.java:368)
at com.vaadin.ui.ComboBox.getOptionsWithFilter(ComboBox.java:461)
at com.vaadin.ui.ComboBox.paintContent(ComboBox.java:261)
at com.vaadin.server.LegacyPaint.paint(LegacyPaint.java:65)
at com.vaadin.server.communication.LegacyUidlWriter.write(LegacyUidlWriter.java:82)
at com.vaadin.server.communication.UidlWriter.write(UidlWriter.java:143)
at com.vaadin.server.communication.UidlRequestHandler.writeUidl(UidlRequestHandler.java:124)
at com.vaadin.server.communication.UidlRequestHandler.synchronizedHandleRequest(UidlRequestHandler.java:92)
at com.vaadin.server.SynchronizedRequestHandler.handleRequest(SynchronizedRequestHandler.java:41)
at com.vaadin.server.VaadinService.handleRequest(VaadinService.java:1435)
at com.vaadin.server.VaadinServlet.service(VaadinServlet.java:380)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:790)
at org.eclipse.jetty.servlet.ServletHolder.handle(ServletHolder.java:808)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1669)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:316)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:126)
at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:90)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:114)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:122)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:111)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:169)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:48)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:158)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.oauth2.provider.authentication.OAuth2AuthenticationProcessingFilter.doFilter(OAuth2AuthenticationProcessingFilter.java:176)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:120)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:64)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:91)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:53)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:213)
at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:176)
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:262)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:121)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1652)
at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:585)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:143)
at org.eclipse.jetty.security.SecurityHandler.handle(SecurityHandler.java:577)
at org.eclipse.jetty.server.session.SessionHandler.doHandle(SessionHandler.java:223)
at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1127)
at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:515)
at org.eclipse.jetty.server.session.SessionHandler.doScope(SessionHandler.java:185)
at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1061)
at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
at org.eclipse.jetty.server.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:215)
at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:97)
at org.eclipse.jetty.server.Server.handle(Server.java:497)
at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:310)
at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:257)
at org.eclipse.jetty.io.AbstractConnection$2.run(AbstractConnection.java:540)
at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:635)
at org.eclipse.jetty.util.thread.QueuedThreadPool$3.run(QueuedThreadPool.java:555)
at java.lang.Thread.run(Thread.java:748)
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</pre>
<p>potentially related to <a class="issue tracker-4 status-5 priority-10 priority-lowest closed child" title="bug: avoid factory.openSession() in CdmRepository (Closed)" href="https://dev.e-taxonomy.eu/redmine/issues/7106">#7106</a> ?</p>
bug #8101 (New): cdm-server docker container uses wrong timezonehttps://dev.e-taxonomy.eu/redmine/issues/81012019-02-15T15:57:43ZAndreas Kohlbecker
<p>The docker container uses UTC but should be in the same timezone as the host system.</p>
<pre>edit-production ~ # date
Fri Feb 15 16:53:52 CET 2019
edit-production ~ # docker exec -it 4df7b3083e04 /bin/bash
bash-4.4# date
Fri Feb 15 15:54:52 UTC 2019
</pre> feature request #8082 (New): cdm-server docker image allows running the cdm-server as non root userhttps://dev.e-taxonomy.eu/redmine/issues/80822019-02-08T10:33:54ZAndreas Kohlbecker
<p>The cdmserver docker image sould accept a ENV variable <code>USER=${username}</code> to define the user under which the java process it being run</p>