Activity
From 12/19/2022 to 01/17/2023
01/17/2023
- 07:09 PM Revision 390cc644 (cdmlib): ref #10222 first incomplete implementation of taxonPageDto
- 03:02 PM bug #10228 (In Progress): Fields for elevation and date should always be expanded
- mail NaK:
noch eine gaanz große Bitte für den nächsten Release, die hoffentlich leicht zu machen ist
Es wäre to... - 02:46 PM Revision e41b3686 (cdmlib): ref #10222 first incomplete implementation of synonymy (cont.)
- 12:26 AM Revision 173ccb3f (cdmlib-apps): ref #10049, ref #10050, ref #10184 add area geo service mapping for MCL
01/16/2023
- 11:16 PM task #10227 (New): Implement bioschema.org on taxon pages
- see https://bioschemas.org/profiles/
and https://bioschemas.org/profiles/Taxon/1.0-RELEASE for better findability
... - 11:10 PM Revision 1eb2f086 (cdmlib): ref #10222 first incomplete implementation of synonymy (cont.)
- 10:52 PM task #10226 (New): Upgrade to Spring 6.x
- copied from #10216 :
* spring 6 links: see also https://www.heise.de/hintergrund/Spring-Framework-6-verarbeitet-N... - 12:07 PM Revision 3c582c09 (taxeditor): add only exception, not exception and message
- 11:47 AM Revision 6c41cae9 (cdmlib): do not add exceptions for name deletion a second time
01/15/2023
- 11:39 PM Revision 49e6e48d (cdmlib): cleanup
- 11:39 PM Revision a2fa0deb (cdmlib): ref #10222 first incomplete implementation of synonymy
- 09:58 PM Revision 23f524d6 (cdmlib-apps): ref #10224 implement Kew Nyctaginaceae import
- 09:56 PM Revision 081ddf46 (cdmlib-apps): rename Kew imports
01/13/2023
- 02:08 PM Revision 6b925e3f (taxeditor): fix sorting in termcombo
- 12:29 PM task #9940: Handle type category formatting in compact typification strings
- By the way, the above notes from NoK are also handled in #9941 which is partly a duplicate for this ticket.
- 12:28 PM task #9940: Handle type category formatting in compact typification strings
- AM
vielen Dank für die Anmerkungen. Ich habe das auch so in Erinnerung und wir werden versuchen es so zu formatier... - 12:24 PM task #9940: Handle type category formatting in compact typification strings
- NoK:
all,
I strongly prefer the style with the main typification put in front because this is the least redund... - 11:00 AM feature request #10133: Improve ontology state vocabularies
- AM:
hier mal die Zusammenfassung, welche Terme in „regions“ bereits verwendet werden.
• abaxial face (1x)
• ap... - 10:18 AM bug #10225: MultipleRepresentationException when moving synonym in homotypic group
- Maybe it is the same as #8591, but in this ticket the exception always appears after setting a synonym as basionym.
- 10:16 AM bug #10225 (Closed): MultipleRepresentationException when moving synonym in homotypic group
- mail NaK:
Hi,
beim Taxon Mammillaria karwinskiana gibt es zwei Synonyme M. senckei, die wollte ich zu einer ho...
01/12/2023
- 04:00 PM task #10224 (Closed): Import Kew Nyctaginaceae data to Caryophyllales
- 01:14 PM bug #10197: Show empty page for delay while updating
- Release 5.36 is a portal performance sprint, so I move this ticket to 5.37
- 12:49 PM task #10220 (Closed): Remove SpecimenCdmExcelImport and EndnoteImport in TaxEditor
- Cleanup finished, so we can close this ticket
- 12:48 PM Revision f16c3c79 (taxeditor): ref #10220: cleanup AppModelid
- 12:45 PM Revision ab261bc7 (taxeditor): ref #10220: cleanup bundle.properties continue
- 12:43 PM Revision 3c8a6a95 (taxeditor): ref #10220: cleanup bundle.properties
- 11:36 AM feature request #1742: Adapt the ZooNameDefaultCacheStrategy
- Also check if the order of ex-authors is correct. It is the the opposite to botanical names
- 11:29 AM bug #2121: Series part is not reflected in cache strategy
- is this still open?
- 11:19 AM bug #7879: Book CacheStrategy does not show 'place published', 'publisher', 'editor'
- maybe a duplicate for #10245
01/11/2023
- 11:11 PM Revision aa222bf3 (cdmlib): ref #10222 handle count in Container
- 11:06 PM Revision 2ea43c9e (cdmlib): cleanup
- 11:04 PM Revision a3841565 (cdmlib): ref #10222 first version of a taxon page dto framework (first TextData)
- 01:31 PM Revision 81321e9d (cdmlib): test
- 01:19 PM bug #10223 (New): References for lectotypes should have short references, not full authorship
- NoK:
bis vor Kurzem hatten wir für die Lectotyp-Referenz im Portal die Konvention, dass ein Kurzverweis in Klammer... - 01:10 PM feature request #10206 (In Progress): Add publish flag to description base
- 12:15 PM Revision e3193da1 (cdmlib): minor
- 12:00 PM Revision 3d586a45 (cdmlib-apps): adapt pesi to new getHqlResult signature
- 07:51 AM Revision ae17a4ad (cdmlib): ref #10222 first version of a taxon page dto framework (cont.)
01/10/2023
- 11:44 PM Revision 24921917 (cdmlib): ref #10222 first version of a taxon page dto framework (cont.)
- 11:03 PM feature request #10206: Add publish flag to description base
- WGB:
Hatten wir eigentlich schon die Sache mit den Factual Datasets zur Publikation diskutiert?
Wir haben ja die... - 11:02 PM feature request #10206: Add publish flag to description base
- First we need to check how easy it is to use the enumset for query filtering. If it is easy we may use the enumset, o...
- 12:48 PM Revision 922e377f (taxeditor): ref 10220: cleanup code after removing specimenExcelImport and endnoteImport
01/09/2023
- 07:42 PM task #10222 (In Progress): Use DTOs for portal taxon page - first implementation for E+M
- 07:31 PM task #10222 (Closed): Use DTOs for portal taxon page - first implementation for E+M
- ... to improve performance and simplify dataportal rendering. If possible formatting should take place server side.
... - 07:36 PM Revision f598b089 (cdmlib): ref #10222 first version of a taxon page dto framework
- 06:15 PM Revision 26bb0b57 (cdmlib): cleanup and javadoc
- 11:20 AM bug #10111: Data loss e.g. when entering type information
- NaK:
das ist mir auch ein paar Mal passiert, aber so sporadisch, dass ich dachte, ich hätte nicht gespeichert. Ich... - 10:29 AM feature request #10203: Show specimen sources in publications
- As we will work on portal taxon pages in 5.36 this might be an issue that can be solved in 5.36. If not we will move ...
- 10:25 AM bug #10068 (Closed): Changing focus to accepted taxon does not work
- This works now.
- 10:06 AM feature request #10221 (Closed): Add form to edit the json file with cdmserver info
- For users it is difficult to find and edit the json file to add a new cdm server. Therefore we should have a form in ...
01/07/2023
01/06/2023
- 09:40 PM bug #10111: Data loss e.g. when entering type information
- AM:
auch das Ticket #10111 sollte jetzt final gereviewed werden nach dem das Release jetzt draußen ist.
In dies... - 09:30 PM bug #10053 (Resolved): Problems with saving of secundum references
- AM to Maryam:
... Katja and I can’t reproduce. Could you please check next time you work with the TaxEditor if it ... - 09:16 PM bug #10054: Changes on secundum reference are lost after changing status to basionym
- Close ticket fully if Maryam does not report again until 4/23
- 09:16 PM bug #10054 (Resolved): Changes on secundum reference are lost after changing status to basionym
- AM to Maryam:
...
As Katja and I can’t reproduce this bug anymore we would like to ask you if you can still repro... - 08:55 PM bug #8953: Focus not correctly evaluated for details view when switching between names
- Close in 4/23 if not reported again.
- 08:54 PM bug #8953: Focus not correctly evaluated for details view when switching between names
- AM:
ihr hattet das Problem in Ticket #8953 vor 2 Jahren beschrieben. Wir haben in diesem Bereich jetzt einiges ver... - 08:49 PM bug #10191 (Closed): Error message on taxon specimen page for non-atomized specimens
- This looks fine also on production so we close the ticket.
The data itself should still be cleaned up. - 08:46 PM bug #8653 (Closed): NullPointerException (NPE) when focusing Taxon Name Editor
- This issue was obiously not related to the import but to code changes related to preferences. The fix looks reasonabl...
- 08:02 PM Revision 2cb7268c (taxeditor): ref #6343, ref 6794 adapt taxeditor to removal of non-typified TermVocabulary.NewInstance method
- 08:02 PM Revision 9ec83bdc (taxeditor): cleanup
- 07:11 PM Revision d7b3d794 (cdmlib): ref #6343, ref 6794 fix creation of OrderedTermVocabulary in imports
- 07:10 PM bug #8270: TermDTOs with an orderIndex are ordered in unordered term vocabularies
- Is this still open?
- 06:19 PM Revision 816eb1d7 (cdmlib-apps): update poms to 5.36
- 06:19 PM Revision c9a18b1c (cdmlib-apps): cleanup
- 06:02 PM Revision cf70a387 (cdmlib): ref #10201 additional update script for synonym type
- 06:01 PM Revision 40e58fe3 (cdmlib): minor
- 05:01 PM task #10220 (In Progress): Remove SpecimenCdmExcelImport and EndnoteImport in TaxEditor
- classes and menu entries are removed, still needs some clean up (strings, comments etc)
- 02:41 PM task #10220 (Closed): Remove SpecimenCdmExcelImport and EndnoteImport in TaxEditor
- mail AM:
~~~
wenn ich es richtig sehe, verwendet der Specimen CDM Excel Import noch nicht die Remoting Implementi... - 02:55 PM Revision a3072f4e (taxeditor): ref #10220: remove unused import code
- 11:58 AM Revision 93a7e8c3 (taxeditor): remove menu entries for SpecimenExcelImport and Endnote import
- 11:12 AM Revision 65c5c491 (cdmlib): ref #10072 remove file-appender from cdmlib-test log4j2-test
- 10:24 AM Revision 51ed8da5 (taxeditor): continue cleanup checklist files
- 10:19 AM Revision 9fb100fb (taxeditor): remove unused class ChecklistEditorInput
01/05/2023
- 09:15 PM task #10205: Update GBIF import to modern json library.
- please also remove the .ignore entries
- 09:03 PM Revision 356e00f7 (taxeditor): javadoc
- 09:03 PM Revision 7b40eb6e (taxeditor): ref #10204, ref #10205 add commons-beanutils and json-lib to .gitignore in taxeditor
- 08:57 PM Revision d197381e (taxeditor): ref #10055 upgrade postgresql to 42.5.1 in taxeditor
- 08:49 PM Revision 980cb5f2 (cdmlib): ref #10055 upgrade postgresql to 42.5.1 in cdmlib
- 08:16 PM feature request #6794 (In Progress): Improve term structure
- 08:13 PM feature request #6794 (Duplicate): Improve term structure
- 06:33 PM task #10216 (In Progress): Upgrade to Spring 5.x
- 05:52 PM bug #6407: Upgrade maven compiler plugin to latest version
I tried to handle aspectj with aspectj-maven-plugin (and remove the ant-run-plugin) in cdmlib-model
https://www.moj...- 05:49 PM Revision ae2585a1 (cdm-server): Merge branch 'release/5.35.0' into develop
- 05:49 PM Revision 45b71a61 (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 05:48 PM Revision 6b6b577d (cdm-server): updating poms for branch'release/5.35.0' with non-snapshot versions
- 05:48 PM Revision 60fe280b (cdm-webapp): Merge branch 'release/5.35.0' into develop
- 05:48 PM Revision 70f70b82 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 05:47 PM Revision acdd8133 (cdm-webapp): updating poms for branch'release/5.35.0' with non-snapshot versions
- 05:47 PM Revision 788cfa8e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.35.0
- 05:35 PM Revision bc57f8df (cdm-vaadin): Merge branch 'release/5.35.0' into develop
- 05:35 PM Revision f585e16a (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 05:31 PM Revision 579728bb (cdm-vaadin): updating poms for branch'release/5.35.0' with non-snapshot versions
- 05:31 PM Revision d8d478e1 (cdm-vaadin): jenkins bumping cdmlib.version to 5.35.0
- 05:31 PM Revision e585c18c (taxeditor): Merge branch 'release/5.35.0' into develop
- 05:31 PM Revision aa7460a8 (taxeditor): Merge branch 'release/5.35.0'
- 05:30 PM Revision 8f5ebfe6 (cdm-dataportal): Merge branch 'release/5.35.0' into develop
- 05:30 PM Revision 39bc3a67 (cdm-dataportal): updating poms for branch'release/5.35.0' with non-snapshot versions
- 05:30 PM Revision 12a3b851 (cdm-dataportal): release-preparation: production level css
- 05:29 PM Revision f51ce131 (cdmlib): Updating develop poms back to pre merge state
- 05:29 PM Revision 12833cf2 (cdmlib): Merge branch 'master' into develop
- 05:29 PM Revision fe942f41 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 05:29 PM Revision 2c4e8753 (cdmlib): Merge branch 'release/5.35.0'
- 05:22 PM task #6981: Migrate to Java 11
- This is maybe blocked by upgrading to maven-compiler-plugin 3.x first which has problems with aspectj handling.
- 05:16 PM Revision bd858eb5 (cdmlib): updating poms for branch'release/5.35.0' with non-snapshot versions
- 05:06 PM bug #8590 (Duplicate): Details view does not show data of new synonym
- This is a duplicate for #10138 and has been fied in current milestone.
- 04:57 PM bug #10068 (Resolved): Changing focus to accepted taxon does not work
- fixed with commit:a5a95b645c5976. Please review. It also solves the issue that when opening the Taxon Editor the focu...
- 03:10 PM bug #10068 (New): Changing focus to accepted taxon does not work
- ok,then we keep it in 5.36
- 02:54 PM bug #10068: Changing focus to accepted taxon does not work
- Katja Luther wrote in #note-2:
> This issue seems to be solved by #10138 and/or #10186. We can remove the version or... - 02:46 PM bug #10068 (Feedback): Changing focus to accepted taxon does not work
- This issue seems to be solved by #10138 and/or #10186. We can remove the version or set it to the current milestone (...
- 04:46 PM Revision a5a95b64 (taxeditor): ref #10068 fix start focus in Taxon Editor
- 04:39 PM Revision 1e60a1f3 (taxeditor): cleanup
- 03:22 PM bug #10080: Source Element sometimes does not appear after selecting a new designation status and after creating a new type designation
- This is still an issue when changing the designation status to holotype, adding a specimen solves the problem. So we ...
- 03:21 PM bug #8953 (Resolved): Focus not correctly evaluated for details view when switching between names
- We will ask users to test after release.
- 02:41 PM bug #8953 (Feedback): Focus not correctly evaluated for details view when switching between names
- I think this problem is fixed, maybe related to #10138 and #10186. We can remove the version or set it to the current...
- 03:19 PM bug #10214: Cache configuration for term cache not correctly initialized in taxeditor
- Now it should reload after 20min (if idle) or 1h (if not idle). Maybe you can test a last time. But it should work as...
- 01:52 PM bug #10214 (Resolved): Cache configuration for term cache not correctly initialized in taxeditor
- Applied in changeset commit:taxeditor|af15e2e37989f818b9098b604242a02adf295818.
- 12:44 PM bug #10214 (Feedback): Cache configuration for term cache not correctly initialized in taxeditor
- Ahh, the reason is that CdmServiceCachingProxy overrides the CdmPermanentCache configuration
- 12:44 PM bug #10214: Cache configuration for term cache not correctly initialized in taxeditor
- Katja Luther wrote in #note-13:
> Andreas Müller wrote in #note-10:
> > This should be fixed. Please review.
> >
... - 09:50 AM bug #10214: Cache configuration for term cache not correctly initialized in taxeditor
- Andreas Müller wrote in #note-10:
> This should be fixed. Please review.
>
> The most important result should be,... - 03:17 PM bug #10186 (Closed): Problems with session handling in taxeditor
- Further issues can be handled in the more detailed tickets.
- 03:12 PM bug #10186 (Resolved): Problems with session handling in taxeditor
- Should we close this ticket and open a new one if we do further research on taxeditor sessions? I think there are a c...
- 02:58 PM bug #10186: Problems with session handling in taxeditor
- Andreas Müller wrote in #note-10:
> Katja Luther wrote in #note-5:
> > SetSelection in setFocus of TaxonNameEditorE4 ... - 02:57 PM bug #10219: Setting the focus to an already selected entity should not refresh the details view
- Similar things happen with the SupplementalDataView.
- 02:48 PM bug #10219: Setting the focus to an already selected entity should not refresh the details view
- Actually if the name editor looses the focus and gets it back the details view still shows the details of the selecte...
- 02:47 PM bug #10219 (New): Setting the focus to an already selected entity should not refresh the details view
- 02:51 PM bug #10138 (Closed): Details view is not updated after freetext change
- 02:17 PM bug #10138 (Feedback): Details view is not updated after freetext change
- Katja Luther wrote in #note-26:
> This is like it was before, I think there is already a ticket about it. (for examp... - 01:06 PM bug #10138 (Resolved): Details view is not updated after freetext change
- 12:20 PM bug #10138: Details view is not updated after freetext change
- Andreas Müller wrote in #note-25:
> Andreas Müller wrote in #note-24:
> > Katja Luther wrote in #note-22:
> > > I jus... - 12:06 PM bug #10138: Details view is not updated after freetext change
- Andreas Müller wrote in #note-24:
> Katja Luther wrote in #note-22:
> > I just tried out another implementation: no... - 11:11 AM bug #10138: Details view is not updated after freetext change
- Katja Luther wrote in #note-22:
> I just tried out another implementation: now the detailsviewer just remember that ... - 11:10 AM bug #10138 (Feedback): Details view is not updated after freetext change
- Katja Luther wrote in #note-21:
> The new solution disables the details view after editing the name in name editor, ... - 10:54 AM bug #10138: Details view is not updated after freetext change
- I just tried out another implementation: now the detailsviewer just remember that there are changes in Name Editor an...
- 09:33 AM bug #10138 (Resolved): Details view is not updated after freetext change
- The new solution disables the details view after editing the name in name editor, editing the other names/taxon/synon...
- 12:58 AM bug #10138 (Feedback): Details view is not updated after freetext change
- This needs to be reverted or adapted. Currently the detail view very often refreshes. This happens also in many cases...
- 02:50 PM Revision 30c6d54a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.35.0-SNAPSHOT
- 02:50 PM Revision 76f03c68 (cdm-webapp): updating poms for 5.36.0-SNAPSHOT development
- 02:50 PM Revision d9fa7f17 (cdm-webapp): updating poms for 5.35.0 branch with snapshot versions
- 02:49 PM Revision 3b4e277a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.36.0-SNAPSHOT
- 02:49 PM Revision e11f2e25 (taxeditor): Updated version in pom / project files to taxeditor version : 5.36.0-SNAPSHOT and cdmlib version : 5.36.0-SNAPSHOT
- 02:49 PM Revision ebbf2f6e (taxeditor): Updated version in pom / project files to taxeditor version : 5.35.0 and cdmlib version : 5.35.0
- 02:48 PM Revision 1a06921d (cdm-dataportal): updating poms for 5.36.0-SNAPSHOT development
- 02:46 PM Revision 2a46edab (cdm-vaadin): jenkins bumping cdmlib.version to 5.35.0-SNAPSHOT
- 02:45 PM Revision 4a634289 (cdm-vaadin): updating poms for 5.36.0-SNAPSHOT development
- 02:45 PM Revision 5d568fe8 (cdm-vaadin): updating poms for 5.35.0 branch with snapshot versions
- 02:45 PM Revision 3f96c927 (cdm-vaadin): jenkins bumping cdmlib.version to 5.36.0-SNAPSHOT
- 02:45 PM Revision 2641ef54 (cdm-server): updating poms for 5.36.0-SNAPSHOT development
- 02:41 PM Revision 39d4cb76 (cdmlib): updating poms for 5.36.0-SNAPSHOT development
- 02:38 PM Revision da7a1612 (cdmlib): ref #10072 remove logging to file in cdmlib log4j2.xml -s
- 02:22 PM Revision 63af5415 (cdmlib): javadoc
- 01:51 PM Revision af15e2e3 (taxeditor): fix #10214 fix overriden cache configuration creation, replace eternal by 1h / 20min
- 01:51 PM Revision 1254f0f0 (taxeditor): cleanup
- 12:21 PM Revision 0eae45c1 (taxeditor): ref #10182: disable details view after freetext changes
- 12:13 PM Revision 215f1b60 (cdmlib): ref #6407 add commented 3.x version to compiler plugin
- 12:11 PM Revision 0588b251 (cdmlib): cleanup
- 11:15 AM Revision cf54a234 (taxeditor): ref #10182: update details view when it gets the focus and there are changes - continue
- 10:51 AM Revision e65bc0e2 (taxeditor): ref #10182: update details view when it gets the focus and there are changes
- 09:53 AM Revision b3cd5153 (taxeditor): ref #10182: disable details view after editing name in name editor - code cleaning
- 09:46 AM Revision 5379e4c7 (taxeditor): ref #10182: disable details view after editing name in name editor - continue
- 09:41 AM Revision abe228a4 (taxeditor): ref #10182: disable details view after editing name in name editor, refresh after save
- 09:28 AM Revision 6abed072 (taxeditor): ref #10182: disable details view after editing name in name editor
- 08:46 AM Revision 9d6a9bbd (taxeditor): ref #10182: revert refresh of details view when loosing focus
- 01:34 AM Revision 28a2e0b5 (taxeditor): ref #10214 rename CdmCacheBase to CdmPermanentCacheBase in TaxEditor (cont.)
- 01:13 AM Revision 87734bf5 (taxeditor): ref #10214 rename CdmCacheBase to CdmPermanentCacheBase in TaxEditor
- 01:05 AM Revision 23732475 (cdmlib): ref #10214 rename CdmCacheBase to CdmPermanentCacheBase
- 12:51 AM Revision 20e97970 (cdm-vaadin): ref #3408 remove EhCacheFacade beans from vaadin applicationContext.xml as it is probably not used in vaadin
- 12:49 AM Revision 28a5e1cd (cdm-vaadin): cleanup
- 12:48 AM Revision c19e393b (cdm-vaadin): ref #10214 adapt vaadin to new CdmPermanentCacheBase name
01/04/2023
- 11:53 PM bug #10214: Cache configuration for term cache not correctly initialized in taxeditor
- This should be fixed. Please review.
The most important result should be, that terms are not loaded anymore when c... - 11:40 PM bug #10214 (Resolved): Cache configuration for term cache not correctly initialized in taxeditor
- Applied in changeset commit:cdmlib|61cf7e7af3a0e164f63cb40ec9d897783e376dca.
- 12:24 AM bug #10214 (Feedback): Cache configuration for term cache not correctly initialized in taxeditor
- This should still be handled in current target version.
- 11:32 PM Revision 61cf7e7a (cdmlib): fix #10214 fix term (default) cache configuration handling
- 11:29 PM Revision 105117de (cdmlib): cleanup
- 11:25 PM Revision 25ba5d31 (taxeditor): cleanup
- 10:20 PM task #9207 (Duplicate): update ehcache dependency and handle hibernate-ehcache
- 10:10 PM task #10218 (New): Unify cache handling in CDM platform
- Currently ehCache is used in different ways throughout the platform.
* transient entity cache - used by TaxEditor ... - 08:02 PM Revision 81ae1883 (cdmlib): ref #10077 remove statistics setting from ehCache config as it is deprectated
- Signed-off-by: Andreas Müller <a.mueller@bgbm.org>
- 06:27 PM task #10201 (Closed): Make synonym type an enum
- Andreas Müller wrote in #note-8:
> still need to test taxeditor and fix dozer test
dozer test fixed and no proble... - 06:24 PM Revision aecc18bb (cdmlib): ref #10201 fix dozer test for synonym type mapping
- 06:22 PM Revision 70711bd7 (cdmlib): cleanup
- 04:08 PM Revision e6842c0d (cdmlib): javadoc for TDWG ontology mapping classes
- 04:02 PM bug #10182 (Closed): Portal does not show typespecimen for duplicated typedesignation
- Looks ok now, I think we can finally close this ticket now.
- 03:07 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-30:
> Katja Luther wrote in #note-29:
> > made code cleaning mentioned in note#23, so... - 02:50 PM bug #10182 (Feedback): Portal does not show typespecimen for duplicated typedesignation
- Katja Luther wrote in #note-29:
> made code cleaning mentioned in note#23, so we can close this ticket.
The code ... - 02:15 PM bug #10182 (Closed): Portal does not show typespecimen for duplicated typedesignation
- made code cleaning mentioned in note#23, so we can close this ticket.
- 12:05 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Katja Luther wrote in #note-26:
> Andreas Müller wrote in #note-25:
> > Andreas Müller wrote in #note-22:
> > > I ... - 09:16 AM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-24:
> I fixed the widgetIsDisposed issue already. Please review and do the other chang... - 09:15 AM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-25:
> Andreas Müller wrote in #note-22:
> > I tried to fix the ClassNotFoundException... - 03:01 PM Revision e2833b13 (taxeditor): ref #10182: code cleaning with previous changes
- 02:57 PM Revision 16f7b120 (taxeditor): Revert "ref #10182 fix widget is disposed in OccurrenceStatusElement"
- This reverts commit fdd9dc5b0e41169f0c258dff17dface2afbea702.
- 02:57 PM Revision c919ecdb (taxeditor): Revert "ref #10182: code cleaning"
- This reverts commit ecf44663eebe48174db1e129091d879b5aaf2eaa.
- 02:15 PM Revision ecf44663 (taxeditor): ref #10182: code cleaning
- 02:05 PM feature request #10196 (Closed): Hybrid structure-state terms
- works as expected now.
- 01:27 PM Revision 371f732a (cdmlib): try to fix test running in suite (cont.)
- 01:04 PM Revision ea49adce (cdmlib): try to fix test running in suite
- 11:59 AM Revision 3b7d528f (cdmlib): cleanup
- 11:57 AM Revision e8fbd83a (cdmlib): ref #10182 adding test to find out what the validation behavior is during load
- 12:22 AM bug #10198 (Closed): Termremoval for OrderedTermVocabularies does not work correctly due to incorrect compareTo and orderIndex decrement
- Andreas Müller wrote in #note-10:
> Moving in TaxEditor now works as expected.
>
> There is still an issue that o... - 12:10 AM feature request #6794: Improve term structure
- Issues with orderindex in existing database can be found by the following queries which search for records that have ...
01/03/2023
- 11:52 PM bug #10111: Data loss e.g. when entering type information
- After short testing I could not reproduce this issue anymore. Maybe it was fixed with #10186. However, this is not gu...
- 11:33 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-22:
> I tried to fix the ClassNotFoundException (taxeditor:commit:384cf0c384d17e0f). S... - 11:22 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- I fixed the widgetIsDisposed issue already. Please review and do the other changes.
- 10:12 PM bug #10182 (Feedback): Portal does not show typespecimen for duplicated typedesignation
- In the TaxEditor log I find multiple times
~~~
!ENTRY eu.taxeditor 2 0 2023-01-03 21:56:39.428
!MESSAGE Widget i... - 05:11 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- I tried to fix the ClassNotFoundException (taxeditor:commit:384cf0c384d17e0f). Still needs to be tested.
- 02:34 PM bug #10182 (Resolved): Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-20:
> did you put this back to InProgress on purpose?
the exception isn't fixed but... - 02:28 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- did you put this back to InProgress on purpose?
- 01:29 PM bug #10182 (In Progress): Portal does not show typespecimen for duplicated typedesignation
- 01:29 PM bug #10182 (Resolved): Portal does not show typespecimen for duplicated typedesignation
- Katja Luther wrote in #note-16:
> Andreas Müller wrote in #note-14:
> > Katja Luther wrote in #note-12:
> > ...
>... - 01:10 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Katja Luther wrote in #note-16:
> Andreas Müller wrote in #note-14:
> > Katja Luther wrote in #note-12:
> > ...
>... - 12:42 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-14:
> Katja Luther wrote in #note-12:
> ...
> > We both (AM und KL) checked the clon... - 12:40 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-13:
> I think the TaxEditor implementation does not use DerivedUnit.clone(). However, ... - 12:38 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Katja Luther wrote in #note-12:
...
> We both (AM und KL) checked the clone mechanism, but during cloning there is ... - 12:37 PM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- I think the TaxEditor implementation does not use DerivedUnit.clone(). However, there was a bug in the clone method t...
- 10:49 AM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Andreas Müller wrote in #note-5:
> Katja Luther wrote in #note-2:
> > The webservice failed because the derived uni... - 10:47 AM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- Added a check in derived unit wizard, which is used for editing specimens of type designations.
- 09:29 AM bug #10182: Portal does not show typespecimen for duplicated typedesignation
- when adding a occurrenceStatus without type now an exception is thrown:
~~~
2023-01-03T09:28:35.757: http://loc... - 11:21 PM Revision fdd9dc5b (taxeditor): ref #10182 fix widget is disposed in OccurrenceStatusElement
- 10:25 PM Revision 6b92893f (cdmlib): add OccurrenceStatus to PermissionClass
- 10:15 PM Revision edc115e3 (cdmlib): add DerivationEvent to PermissionClass
- 10:07 PM Revision 6f665ff7 (taxeditor): cleanup
- 06:33 PM feature request #10202 (Closed): Allow entering specimen in fact sources in taxeditor
- works as expected now
- 05:50 PM bug #10214 (In Progress): Cache configuration for term cache not correctly initialized in taxeditor
- 05:04 PM Revision 0070dfe4 (taxeditor): cleanup
- 05:04 PM Revision 384cf0c3 (taxeditor): ref #10182 try to fix ClassNotFoundException for javax.validation.ConstraintViolation
- 03:58 PM feature request #10196: Hybrid structure-state terms
- Katja Luther wrote in #note-17:
> Clicking on character "growth form" in Bupleurum instance results in StackOverflow... - 09:13 AM feature request #10196 (Feedback): Hybrid structure-state terms
- Clicking on character "growth form" in Bupleurum instance results in StackOverflowException (in DescriptiveDataSet Ed...
- 03:54 PM Revision ea76aec6 (cdmlib): ref #10196 fix findByTermType
- 03:54 PM Revision bf502b97 (cdmlib): cleanup
- 03:53 PM Revision 0743ef0c (cdmlib): commit only
- 01:15 PM Revision 9a095fa3 (taxeditor): ref #10182: mark type red if empty
- 12:29 PM Revision 0ec25996 (cdmlib): javadoc
- 12:27 PM Revision 98ba42ca (cdmlib): ref #2506, ref #10182 fix clone method for DerivedUnit.status
- 12:26 PM Revision 0a403690 (cdmlib): cleanup
- 11:02 AM Revision 638a7036 (taxeditor): fix NPE
- 10:42 AM Revision fbbfeef9 (taxeditor): ref #10182: do not allow to save derived unit without occurrence status type in wizard
12/31/2022
- 11:55 AM task #3408 (In Progress): replace spring-modules-cache by up to date implementation
- The fix did not work. See failing jenkins tests with:
~~~
Caused by: org.springframework.beans.PropertyBatchUpdat... - 11:48 AM Revision 9a7605ff (cdmlib): Revert " fix #3408, ref #9359 remove springmodules dependency by workaround in AbstractOaiPmhController"
- This reverts commit cbe13549e0a30b0dd4e3553cb48c7a34ead84e3b.
12/29/2022
- 12:12 PM Revision c2c53e50 (cdmlib): cleanup
12/27/2022
- 09:15 PM Revision e2871450 (cdmlib): ref #10216 fix classification test path
- 07:20 PM Revision 0a954e76 (taxeditor): adapt taxeditor to changes in CdmRemoteCacheManager
- 07:07 PM Revision ef53419f (cdmlib): cleanup
- 06:13 PM feature request #10058: Further improve specimen page (factual data, extensions,
- additional issues for specimen page:
mail NK:
Ich weiß nicht ob die 2-Spaltigkeit bei Preserved specimen bis An... - 04:49 PM Revision 24d26860 (cdmlib): cleanup and adapt spelling suggestion to spring-hibernate5 dao
- 03:53 PM task #9359 (Closed): Update cdmlib, taxeditor, cdmserver etc. dependencies
- All open issues moved to upgrade 2023 #10055
- 02:16 PM task #10216 (In Progress): Upgrade to Spring 5.x
- copied from #10055
there is a local feature branch "feature_10216_spring5"
Issues:
* unitils support (could ... - 01:47 PM task #3408 (Resolved): replace spring-modules-cache by up to date implementation
- Applied in changeset commit:cdmlib|cbe13549e0a30b0dd4e3553cb48c7a34ead84e3b.
- 01:37 PM Revision 3c314956 (cdmlib): cleanup
- 01:36 PM Revision cbe13549 (cdmlib): fix #3408, ref #9359 remove springmodules dependency by workaround in AbstractOaiPmhController
- * fix fully after upgrading to spring 5.x and EhCache 3.x
- 12:33 PM Revision cd142a4a (cdmlib): cleanup
12/26/2022
- 11:58 PM Revision 6745191b (cdmlib): cleanup
- 10:17 PM Revision 6f2fdbed (cdmlib): cleanup
- 10:00 PM Revision 106be861 (cdmlib): cleanup
- 09:54 PM Revision d895f2bb (cdmlib): cleanup
- 08:17 PM Revision 848a0d7d (cdmlib): cleanup
- 08:11 PM Revision 9c90cb9c (taxeditor): fix logging in service proxy
- 08:00 PM Revision 052b7a05 (cdmlib-apps): adapt app-import and pesi to latest changes in cdmlib
- 07:59 PM Revision 6bbb9326 (cdmlib-apps): cleanup
- 07:43 PM Revision 71477484 (taxeditor): cleanup
- 07:42 PM Revision b01f9126 (cdm-vaadin): cleanup
- 07:34 PM Revision 2f3aa2b9 (cdmlib): cleanup
- 04:21 PM Revision a6261600 (cdmlib): cleanup
- 02:00 PM Revision 51a4c26c (cdmlib): cleanup
- 01:09 PM Revision d74319f1 (cdmlib): cleanup and javadoc
- 01:06 PM task #10215 (New): Updates, upgrades and cleanup 2024
- All tasks that should be considered during the 2024 updates, upgrades and cleanup sprint.
Upgrades to latest versi...
12/23/2022
- 12:27 AM Revision 6f08293c (cdmlib): cleanup
12/22/2022
- 11:02 AM bug #10138: Details view is not updated after freetext change
- Katja Luther wrote in #note-18:
> Andreas Müller wrote in #note-16:
> > As far as I can see the event throwing not ...
12/21/2022
- 02:27 PM Revision fef39755 (taxeditor): ref #10138: handle selection of empty media or factual data view
- 02:21 PM bug #8381 (Closed): Closing the details view throws widget is disposed exception
- This exception is thrown by our own code, so I remove the try catch because then the WidgetIsDisposedExcpetion will b...
- 01:19 PM bug #10214: Cache configuration for term cache not correctly initialized in taxeditor
- Also it is unclear why single instances of CdmServiceCachingProxy to all use the static DEFAULT_CACHE_NAME from the b...
- 01:13 PM bug #10214 (Closed): Cache configuration for term cache not correctly initialized in taxeditor
- This results in short time-to-live and time-to-idle values (and maybe others) as values are taken from default ehCach...
- 11:43 AM Revision 14473bb6 (taxeditor): cleanup and renaming for caching
- 11:19 AM Revision 4a718660 (cdm-vaadin): cleanup and renaming for caching
- 11:18 AM Revision 7035cc5a (cdmlib): cleanup and renaming for caching
- 10:42 AM bug #10211 (Closed): Add categorical and quantitative data to cdm light export
- export looks ok.
- 10:41 AM Revision cf3f15d3 (cdmlib): ref #10211: remove new FormatKey[] {}
- 10:35 AM bug #8591 (In Progress): Multiple representations problem on setting synonym as basionym
- 10:32 AM bug #10138 (In Progress): Details view is not updated after freetext change
- Andreas Müller wrote in #note-16:
> As far as I can see the event throwing not happens additionally to the event thr... - 10:09 AM feature request #10202 (Resolved): Allow entering specimen in fact sources in taxeditor
- Andreas Müller wrote in #note-11:
> When recreating details view the state is not yet evaluated. So if a reference e... - 10:08 AM Revision 57204e91 (taxeditor): ref #10202: disable reference or specimen selection
- 09:47 AM Revision 114109ef (cdmlib): ref #10211: minor
- 12:03 AM Revision 20cbb1bf (taxeditor): cleanup
- 12:01 AM Revision fbd332d3 (cdmlib): cleanup
12/20/2022
- 10:50 PM bug #10204 (Closed): GBIF search does not work due to missing json-lib
- According to KL this works now. Reverting 4 dependencies is handled in #10205 so we can close this ticket.
- 10:45 PM feature request #10199 (Closed): Implement multi-select for terms in term vocabulary editor
- Seems to work now as expected
- 03:23 PM Revision ec4e915f (taxeditor): ref #10186 fix incorrect isInDelay handling in SelectionDelay
- 02:10 PM bug #10138 (Feedback): Details view is not updated after freetext change
- Can you please check this in detail.
- 02:08 PM bug #10138: Details view is not updated after freetext change
- As far as I can see the event throwing not happens additionally to the event thrown by selection change. We need to c...
- 02:02 PM Revision 94fccb8a (taxeditor): ref #10138 disable REFRESH_DETAILS
- 02:02 PM Revision 253231ca (taxeditor): cleanup
- 01:31 PM feature request #10202 (Feedback): Allow entering specimen in fact sources in taxeditor
- When recreating details view the state is not yet evaluated. So if a reference exists already it is still possible to...
- 11:07 AM feature request #10202 (Resolved): Allow entering specimen in fact sources in taxeditor
- Andreas Müller wrote in #note-9:
> Katja Luther wrote in #note-8:
> > Andreas Müller wrote in #note-7:
> > > This ... - 10:47 AM feature request #10202: Allow entering specimen in fact sources in taxeditor
- Katja Luther wrote in #note-8:
> Andreas Müller wrote in #note-7:
> > This generally works. During review I only wo... - 09:39 AM feature request #10202: Allow entering specimen in fact sources in taxeditor
- Andreas Müller wrote in #note-7:
> This generally works. During review I only wonder where to put it and how to hand... - 01:13 PM Revision c042e8ee (cdmlib): ref #10182, ref #2506 add notNull to OccurrenceStatus.type to avoid meaningless status
- 12:44 PM bug #10211 (Resolved): Add categorical and quantitative data to cdm light export
- 12:19 PM Revision 40ee2212 (taxeditor): ref #10204, ref #9359 add beanutils and commons-collections to taxeditor buildproperties again -continue
- 11:48 AM Revision 387a5e68 (taxeditor): ref #10204, ref #9359 add beanutils and commons-collections to taxeditor buildproperties again
- 10:58 AM Revision beab159a (taxeditor): ref #10204, ref #9359 add beanutils and commons-collections to taxeditor pom again
- 10:23 AM Revision 55d0a6a4 (cdmlib): Add referencing object formatter for term nodes
- 09:45 AM Revision 446b26b9 (taxeditor): ref #10202: disable specimen selection or reference selection if the other possibility is already used
- 09:25 AM feature request #10212 (Closed): Add usePlural to StateData
- adapted formatters in cdmlib. I guess this can be closed.
- 09:24 AM Revision 49ab0cec (cdmlib): ref #10201 remove SynonymType.csv
- 09:24 AM Revision aa1e840e (cdmlib): ref #10212 adapt formatters to usePlural
- 09:02 AM feature request #10213 (New): Adapt taxeditor to use StateData.usePlural
- see #10212
In TaxEditor we may show both normal and plural label in combobox as 2 entries if a plural form exists.... - 08:54 AM Revision d6f98023 (cdmlib): ref #10201 add vocabulary removal for synonym types
- 08:49 AM Revision df6f5a8b (taxeditor): ref #10204, ref #9359 add ezmorph to taxeditor pom again
- 06:30 AM Revision 4633b33a (cdmlib): cleanup
- 06:22 AM Revision 6d38d5c2 (cdmlib): cleanup
12/19/2022
- 09:33 PM Revision 611f5f1f (taxeditor): ref #10204, ref #9359 add json-lib to taxeditor pom again
- 04:52 PM Revision 35a9827b (cdm-vaadin): ref #10212 update test H2 for vaadin
- 04:51 PM Revision d33badd8 (taxeditor): ref #10212 update test H2 for taxeditor
- 04:50 PM feature request #10212 (Resolved): Add usePlural to StateData
- Applied in changeset commit:cdmlib|3a935f11615fe5bb21d9e1bd00858d057cb1ba77.
- 04:03 PM feature request #10212 (In Progress): Add usePlural to StateData
- 04:03 PM feature request #10212 (Closed): Add usePlural to StateData
- To allow having only 1 state/structure for the same thing. But only distinguish correct representation in StateData b...
- 04:50 PM Revision 3a935f11 (cdmlib): fix #10212 add usePlural to StateData
- 03:54 PM Revision 9db3e365 (cdmlib): ref #10194 fix FullCoverageDataGenerator for new constraint
- 03:39 PM bug #10198: Termremoval for OrderedTermVocabularies does not work correctly due to incorrect compareTo and orderIndex decrement
- Moving in TaxEditor now works as expected.
There is still an issue that orderindex misses some numbers in between ... - 01:55 PM bug #10198 (Resolved): Termremoval for OrderedTermVocabularies does not work correctly due to incorrect compareTo and orderIndex decrement
- I debugged now in TaxEditor with rem_conf_am NamedArea voc "Test sorting". Moving "Europe2" below Land3 (eclipse View...
- 01:32 PM bug #10198 (Feedback): Termremoval for OrderedTermVocabularies does not work correctly due to incorrect compareTo and orderIndex decrement
- Katja Luther wrote in #note-7:
> Also tested move and delete in TaxEditor.
> @AM: Please review the move with posit... - 03:31 PM bug #10191: Error message on taxon specimen page for non-atomized specimens
- Looks fine.
We should do a final review on production after release. - 01:21 PM bug #10191 (Resolved): Error message on taxon specimen page for non-atomized specimens
- For unatomized field unit informations the label covers only the rows of field unit information, please review.
- 03:27 PM feature request #10194: Allow specimens as source for factual data
- Added constraint that either reference or specimen can have a value but not both.
- 03:26 PM Revision df718639 (cdmlib): ref #10194 add either reference or specimen constraint
- 03:24 PM Revision a17b3f58 (cdmlib): cleanup
- 02:32 PM feature request #10202 (Feedback): Allow entering specimen in fact sources in taxeditor
- This generally works. During review I only wonder where to put it and how to handle it best.
My suggestion is to m... - 02:22 PM feature request #10202: Allow entering specimen in fact sources in taxeditor
- Katja Luther wrote in #note-3:
> Added the field, the preference is still missing.
This seems to be implemented i... - 02:04 PM Revision 2e748910 (cdmlib): ref #10198 revert 6b68bfb9 (before and after handling in moveTerm)
- 02:03 PM Revision 4356940e (cdmlib): ref #10198 use more intuitive parameter names and cleanup
- 01:46 PM bug #10211 (Feedback): Add categorical and quantitative data to cdm light export
- Code looks ok though using "new FormatKey[] {}" is not necessary I think. Better use null (this is all work-in-progre...
- 12:18 PM bug #10211: Add categorical and quantitative data to cdm light export
- Andreas Müller wrote in #note-1:
> For review?
Yes, please review. - 11:48 AM bug #10211 (Resolved): Add categorical and quantitative data to cdm light export
- For review?
- 11:43 AM bug #10211 (Closed): Add categorical and quantitative data to cdm light export
- Categorical and quantitative data are still missing in cdmLight export, this should be implemented.
- 01:41 PM Revision 8369bf53 (taxeditor): ref #10204: minor
- 01:27 PM bug #10204: GBIF search does not work due to missing json-lib
- There is still this error message:
net.sf.ezmorph.Morpher cannot be found by eu.etaxonomy.taxeditor.cdmlib_5.35.0.... - 01:07 PM Revision 8a2d7112 (cdm-dataportal): ref #10191: for not atomized field unit data, label should cover only the fieldunit rows - continue
- 12:37 PM Revision cfc50709 (cdm-dataportal): ref #10191: for not atomized field unit data, label should cover only the fieldunit rows
- 12:17 PM Revision 2c701369 (cdmlib): cleanup
- 12:12 PM Revision 73afc4bc (cdmlib): cleanup
- 11:58 AM bug #10192 (Closed): External Links do not work in E+M
- The answers of the users were all that the new solution is ok or even better, so we can close this ticket.
- 11:44 AM Revision afdf0ae6 (cdmlib): ref #10211: add categorical and quantitative data to cdmlight export
- 11:19 AM feature request #10133: Improve ontology state vocabularies
- For moving states to structures I used:
~~~
UPDATE DefinedTermBase
SET vocabulary_id = 216, titleCache = REPLACE (ti... - 11:17 AM feature request #10133: Improve ontology state vocabularies
- State vocabularies are currently not correctly ordered because the vocs are not OrderedTermVocs:
~~~
SELECT *
FR... - 11:09 AM feature request #10210 (New): UI for configuring condensed distribution string via separate parameters
- Currently one can only choose from the 2 recipies (E+M, Cuba) but cdmlib allows already detailed configuration (see C...
- 11:05 AM bug #9987: Handle areas of different vocabularies in comparator
- Additionally we should offer to use term trees instead of vocabularies.
- 10:56 AM Revision 7b092ee8 (taxeditor): minor
- 10:33 AM Revision cf8302dc (taxeditor): add warning that taxa will be deleted with all factual data
- 10:24 AM bug #6163: can't add media to observation/specimen anymore
- Is this still an open issue?
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