Activity
From 06/13/2022 to 07/12/2022
07/12/2022
- 11:49 PM Revision f104a204 (cdmlib): cleanup
- 11:03 PM Revision fc477304 (cdm-vaadin): cleanup
- 11:02 PM Revision 7aa81094 (cdm-vaadin): cleanup and rename RegistrationValidationException to TypeDesignationSetException in vaadin
- 10:50 PM Revision 45356f85 (cdmlib): ref #10089 implement TypeDesignationSetContainer ordered by status not field unit
- 10:42 PM Revision 8e73bb3d (cdmlib): cleanup
- 10:40 PM Revision 9a5a2693 (cdmlib): cleanup and rename RegistrationValidationException to TypeDesignationSetException (cont.)
- 10:03 PM Revision c4a57e04 (cdmlib): cleanup and rename RegistrationValidationException to TypeDesignationSetException
- 09:16 PM Revision 48c8ef25 (cdmlib): minor
- 09:14 PM Revision 50778c94 (cdmlib): ref #10089 rename TypeDesignationSetManager to TypeDesignationSetContainer in cdmlib
- 08:54 PM Revision d9a042e5 (cdm-vaadin): ref #10089 rename TypeDesignationWorkingSet to TypeDesignationSet in vaadin
- 08:52 PM Revision 262c0177 (cdmlib): ref #10089 rename TypeDesignationWorkingSet to TypeDesignationSet in cdmlib
- 08:15 PM Revision d7160e6b (cdm-vaadin): ref #10089 remove TypedEntityReference from TypeDesignationWorkingSet in vaadin
- 08:13 PM Revision 3fb08830 (cdmlib): ref #10089 remove TypedEntityReference from TypeDesignationWorkingSet
- 08:13 PM bug #10089 (Closed): Order TypeDesignationSetContainer by status type
- Currently it is first ordered by base entity (e.g. field unit) alphabetically and only within TypeDesignationWorkingS...
- 07:54 PM Revision 4ce0e91d (cdm-vaadin): cleanup
- 06:25 PM Revision 61d1e335 (cdm-vaadin): replace LinkedHashMap by Map where possible in vaadin
- 06:24 PM Revision 7667f093 (cdm-vaadin): cleanup
- 06:22 PM Revision 8d7c7784 (cdmlib): make TypeDesignationWorkingSet a decorator and not inherit directly from LinkedHashMap
- 05:59 PM Revision edc8c14e (cdmlib): replace LinkedHashMap by Map where possible
- 05:58 PM Revision 1ddf0695 (cdmlib): cleanup
07/11/2022
- 08:41 PM Revision 7de1e8a5 (cdmlib): ref #10087 make placement source and placement source FK explicit columns and refactor test (also ref #10081 )
- 08:39 PM Revision b1fafec1 (cdmlib): ref #10087 make placement source and placement source FK explicit columns and refactor test (also ref #10081 )
- 06:48 PM feature request #10081: Show name in source for sec ref of accepted taxon
- I also implemented for CDM light (commit:9e545c61). This was still missing as CDM light does not use the TaxonDefault...
- 06:42 PM Revision 9e545c61 (cdmlib): ref #10081 add secundum name used in source to cdmlight
- 06:41 PM Revision 9e5bde9c (cdmlib): cleanup
- 03:03 PM feature request #10088 (New): Implement bibliography parser
- Pensoft uses:
For the parser you can check https://anystyle.io/. It works pretty well in most cases.
- 01:05 PM feature request #10087 (Resolved): Add taxon node source to status notes in cdmlight
- This is implemented, however, we still need to discuss if this is really the correct solution or if we better should ...
- 12:55 PM feature request #10087: Add taxon node source to status notes in cdmlight
- AM:
Ganz sicher bin ich mir aber nicht, ob das semantisch immer 100% richtig ist. Die Placement Source ist ja eine g... - 11:43 AM feature request #10087: Add taxon node source to status notes in cdmlight
- WGB:
Hallo,
mir ist aufgefallen, dass in Taxon.csv zwar die „Status notes“ (aus dem Taxon Node Dialog) ausgegeben... - 11:42 AM feature request #10087 (Closed): Add taxon node source to status notes in cdmlight
- 01:03 PM Revision a9f7b763 (cdmlib): ref #10087 add taxon node source to status notes in cdmlight
- 01:02 PM Revision 09da8d56 (cdmlib): cleanup
07/10/2022
- 10:37 AM task #10064: Upgrade cybertaxonomy.org to Drupal9
- Editing text on https://cybertaxonomy.org/setups/group/server_requirements does not work. The text seems to be store...
07/08/2022
- 11:21 PM task #10064: Upgrade cybertaxonomy.org to Drupal9
- On https://cybertaxonomy.org/node/4/edit I tried to change the link for "Taxonomic Editor (TaxEditor)" from "http://w...
- 11:06 PM bug #10079: Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- Remaining issues should be solved in next milestone
- 11:05 PM bug #8343 (Closed): potential timezone problem in application stack
- I think this ticket can be closed. The timezone problem is now solved with correct availability of timezone informati...
- 10:58 PM feature request #10081: Show name in source for sec ref of accepted taxon
- Tests and improved handling of secundum part is handled in #10085
- 10:33 PM feature request #10081 (Feedback): Show name in source for sec ref of accepted taxon
- Generally works but there is an unwanted whitespace after the closing bracket.
See https://test.e-taxonomy.eu/dat... - 10:54 PM bug #10075 (Closed): Fix deserialization exception for bytebuddy base hibernate SerializableProxy
- I think we can close this ticket as the problem did not show up anymore.
- 10:53 PM task #3722 (Feedback): Using @OrderColumn does not work in trees
- 10:39 PM bug #10059 (Closed): Link for stored under and identification on specimen page does not work correctly
- Works as expected
- 09:33 PM bug #10076 (Closed): Exception when opening character matrix with classification as root node
- Works as expected.
- 04:32 PM feature request #10083: Add name relationship type "avoids homonym of"/"causes replacement name"
- Update script is written and checked on integration.
Dataportal and cdmlight(?) still need to be updated.
Relationsh... - 04:20 PM feature request #10083: Add name relationship type "avoids homonym of"/"causes replacement name"
- ~~~
SELECT r.id relId, n1.titleCache n1, t.titleCache rel, n2.titleCache n2, n1.nameCache n1short, n2.nameCache n2sho... - 02:26 PM feature request #10086: Taxonomic and geographic search for data portal
- ERS:
das typische Ergebnis einer Geo-Abfrage sieht so aus:
Man wählt ... - 02:22 PM feature request #10086 (New): Taxonomic and geographic search for data portal
- Geo search already works but the taxonomic filter is still missing. This is a filter on any higher taxon (>= genus ?)...
- 02:15 PM task #8865 (In Progress): more external-links to be implemented
- Eckhard, can you please check if there is still some issue open from this ticket or if it can be closed?
07/07/2022
- 11:58 PM Revision 0bb5c8a2 (cdmlib): ref #10067 cleanup CdmModelCacher
- 11:01 PM Revision 5864d558 (cdmlib): ref #6696 write model cache to target and use compile phase
- 11:00 PM Revision 2b7260c4 (cdmlib): add ehcache to cdmlib-cache
- 09:57 PM Revision 49eb471d (cdmlib): cleanup
- 09:43 PM Revision 22aa850d (cdmlib): ref #6696 change maven phase for CdmModelCache creation and move cdmlib-cache modul up behind cdmlib-service
- 08:49 PM Revision 1a1e2ca4 (cdmlib): ref #6696 create CdmModelCache during maven and remove cached model from git
- 05:54 PM Revision c0ed5d8e (cdmlib): ref #10067 save new cache model created with hibernate version 5.4
- 02:35 PM feature request #10083 (Resolved): Add name relationship type "avoids homonym of"/"causes replacement name"
- The relationship was added. We still need an update script or handling for the inverse label and for existing data.
- 12:44 PM bug #10084: Adding a new specimen to character matrix fails
- Katja Luther wrote in #note-4:
> Andreas Müller wrote in #note-3:
> > Generally the bug seems to be fixed and the t... - 10:57 AM Revision 017bce1e (cdmlib): ref #10083 add AVOIDS_HOMONYM_OF name relationship
- 10:57 AM Revision d1ea8316 (cdmlib): cleanup
07/06/2022
- 04:12 PM Revision 36a4dfbd (cdmlib): ref #10081: add secNameInSourceSeparator to separator
- 03:19 PM Revision a1998e47 (cdm-dataportal): ref #10081: remove the font-style for separator again
- 03:18 PM Revision 143a6271 (cdmlib): ref #10081: add tag secNameInSourceSeparator and use it in cacheStrategy
- 03:17 PM feature request #10081: Show name in source for sec ref of accepted taxon
- Added a new tag for the separators surrounding the name used in source, this is extracted from the taggedTaxon and if...
- 03:03 PM Revision ff162af3 (cdm-dataportal): ref #10081: adapt nameInSource handling in portal
- 10:11 AM task #3722: Using @OrderColumn does not work in trees
- On PolytomousKeys:
* added a fresh PK
* added a new top level node (like always) results in a sortindex 1 for thi... - 09:56 AM task #3722: Using @OrderColumn does not work in trees
- Andreas Müller wrote in #note-18:
> Term trees/nodes also seem to work. Katja, can you please double check this?
... - 10:00 AM bug #10084 (Feedback): Adding a new specimen to character matrix fails
- 10:00 AM bug #10084: Adding a new specimen to character matrix fails
- Katja Luther wrote in #note-4:
> Sometimes it needs a break, than a better solution could be found. I solved it with... - 09:50 AM bug #10084 (Resolved): Adding a new specimen to character matrix fails
- Andreas Müller wrote in #note-3:
> Generally the bug seems to be fixed and the ticket can be closed.
>
> Only the... - 09:49 AM Revision f134a838 (cdmlib): ref #10084: add type comparison to hql again
07/05/2022
- 11:24 PM Revision 4d1f9d42 (taxeditor): cleanup
- 11:19 PM Revision 5e838349 (taxeditor): cleanup
- 11:14 PM Revision 599c91e5 (taxeditor): cleanup
- 10:56 PM Revision 9a6e5099 (cdmlib): cleanup
- 10:55 PM Revision 758086db (taxeditor): Preferenzen->Präferenzen
- 10:55 PM Revision 3f5ed758 (taxeditor): cleanup
- 10:20 PM Revision 35105144 (cdmlib): ref #10067, ref #3722, ref #8127 remove remaining sortindex handling from polytomous key node
- 10:19 PM Revision 4b8da4a0 (cdmlib): cleanup
- 06:15 PM task #3722: Using @OrderColumn does not work in trees
- Term trees/nodes also seem to work. Katja, can you please double check this?
- 06:15 PM task #3722: Using @OrderColumn does not work in trees
- SQL for testing persisted Polytomous Key Nodes:
~~~SQL
SELECT pkn.id, pkn.created, nodenumber, KEY_id, parent_id,... - 06:08 PM task #8127: [Reminder] to check if Hibernate Null Value bug still exists
- See also #3722#note-14 ff for comments relevant here.
- 05:57 PM bug #10084 (Feedback): Adding a new specimen to character matrix fails
- Generally the bug seems to be fixed and the ticket can be closed.
Only the handling of descriptionType in the code... - 04:01 PM feature request #10081 (Resolved): Show name in source for sec ref of accepted taxon
- Set the font-style for separator to normal, this is the way it is done for markers. Please review.
I also will have... - 01:43 PM feature request #10081 (Feedback): Show name in source for sec ref of accepted taxon
- The current formatting shows brackets and "sub" in italics but only the name parts should be in italics.
This is b... - 01:32 PM feature request #10081 (Resolved): Show name in source for sec ref of accepted taxon
- 01:32 PM feature request #10081: Show name in source for sec ref of accepted taxon
- with the correct init strategy the name in source is shown. for review : https://int.e-taxonomy.eu/dataportal/integra...
- 03:57 PM Revision c377a0d9 (cdm-dataportal): ref #10081: add separator font-style
- 01:52 PM Revision 3b4b9e2f (taxeditor): ref #10067, ref #3722, ref #8127 remove null value handling from PolytomousKeyGraphContentProvider in taxEditor
- 01:28 PM Revision 5c45a99a (cdmlib): ref #10067, ref #3722, ref #8127 remove all manual sortindex and null value handling from polytomous key (node)
- 01:25 PM Revision 0694bb3d (cdmlib): ref #10067, ref #8127 remove remaining null value handling from taxon node
- 01:24 PM Revision 3dc1adc5 (cdmlib): ref #10067, ref #3722, ref #8127 remove all manual sortindex and null value handling from term node
- 01:19 PM Revision ab85ad67 (cdmlib): ref #10067, ref #8127 remove "removeAllNull" (HHH_9751_Util) from DescriptionBase
- 11:16 AM Revision 059a8e53 (taxeditor): ref #8818: remove predicate from distribution status table in preferences
- 09:56 AM bug #10079: Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- I discussed with WHK how far time information is needed in the phycobank dataportal. According to WHK it is (currentl...
- 09:46 AM Revision edb488c8 (taxeditor): test
07/04/2022
- 10:35 PM Revision 84f11f2b (cdmlib): revert remove strange IkeyPlusImport properties files in io/src/test/resources/main
- 10:12 PM Revision bb03b5f4 (cdmlib): cleanup and remove strange IkeyPlusImport properties files in io/src/test/resources/main
- 10:02 PM Revision 53fc098d (taxeditor): improve logging for exception in AbstractPersistentCollection.remoteInitialize()
- 09:43 PM Revision f13320e2 (cdmlib): fix CCE in IOServiceImpl for URI based imports
- 09:43 PM Revision 27f9f715 (cdmlib): cleanup and javadoc
- 03:43 PM Revision 4c68380d (cdmlib-apps): ref #9359 remove hsqldb StringComparator from ErmsTaxonImport
- 03:43 PM Revision 5bb9c7d1 (cdmlib-apps): update e-Flora and pesi to 5.32.0-SNAPSHOT
- 03:35 PM Revision e11ce0a9 (cdmlib-apps): cleanup
- 03:35 PM Revision 4b88f183 (cdmlib-apps): adapt BerlinModelImport to new cacheStrategy getter
- 03:34 PM Revision b10eeaf7 (cdmlib-apps): update app-import to 5.32.0-SNAPSHOT
- 03:30 PM Revision 8c64898f (cdmlib): ref #9359 update log4j to 2.18.0 in cdmlib
- 03:29 PM Revision 7af8b889 (utis-webapp): ref #9359 update log4j to 2.18.0 in utis-webapp
- 03:27 PM Revision f2234658 (cdm-dataportal): ref #9359 update log4j to 2.18.0 in dataportal
- 03:04 PM Revision c7e9d1ed (cdmlib): add nomenclatural author of nameInSource to init strategy
- 12:29 PM Revision 904397ee (taxeditor): remove debug messages
- 12:19 PM Revision bc55416e (cdmlib): ref #10081: add nameUsedInSource to initStrategy
- 10:22 AM Revision 4287668c (taxeditor): add debugging for source section
- 09:52 AM Revision ea87ffcb (taxeditor): add debugging for source section
- 09:25 AM Revision 083eabed (taxeditor): minor
07/01/2022
06/29/2022
- 06:31 PM Revision 00931afd (cdmlib): cleanup
- 06:14 PM Revision 2c1a59f9 (taxeditor): adapt TaxEditor to WordTermExportConfigurator
- 06:14 PM Revision c7f0af52 (taxeditor): cleanup
- 04:27 PM Revision 5552c0c6 (cdmlib): rename WordTermExport
06/28/2022
- 05:52 PM bug #10080 (In Progress): Source Element sometimes does not appear after selecting a new designation status and after creating a new type designation
- This is really strange behavior, the source element should be shown every time but in stable and nightly the source i...
- 12:59 PM bug #10080: Source Element sometimes does not appear after selecting a new designation status and after creating a new type designation
- We need to check if this can be done fast.
- 11:49 AM bug #10076 (Resolved): Exception when opening character matrix with classification as root node
- This should be fixed, please review.
- 11:46 AM bug #10084 (Resolved): Adding a new specimen to character matrix fails
- Please review.
- 11:43 AM bug #10084 (Closed): Adding a new specimen to character matrix fails
- The following exception appears when trying to save the character matrix after adding a new specimen:
~~~
last ... - 11:44 AM Revision bce2d0e5 (cdmlib): fix 10084: fix problem with missing taxonuuid in dto
- 09:23 AM feature request #10082: Improve formatting for pro parte misapplications
- Example: https://europlusmed.org/cdm_dataportal/taxon/63fead7a-662a-4082-9503-c6ea994c2049
06/27/2022
- 02:21 PM feature request #10083: Add name relationship type "avoids homonym of"/"causes replacement name"
- Separate discussion WGB-AM:
...
AM
ja, das war semantisch nie einfach, was bei blocking name was ist bzw. be... - 02:18 PM feature request #10083: Add name relationship type "avoids homonym of"/"causes replacement name"
- AM:
diese Mail ist letztes Jahr leider bei mir liegen geblieben. Aus aktuellem Anlass würde ich sie gerne wieder a... - 02:14 PM feature request #10083 (Discussed): Add name relationship type "avoids homonym of"/"causes replacement name"
- ERS:
das Pendant zu „is blocking name for“ lautet „is new combination blocked by“. Es gibt aber auch den Fall, das... - 01:51 PM feature request #10083 (Closed): Add name relationship type "avoids homonym of"/"causes replacement name"
- Currently we have a name relationship type "is blocking name for" with a label "is new combination blocked by" for th...
- 12:07 PM feature request #10082 (Closed): Improve formatting for pro parte misapplications
- ERS:
... kann ich mich nicht mehr erinnern, ob wir uns schon auf eine einheitliche Darstellung des „p.p.“ geeinigt... - 11:55 AM feature request #10081: Show name in source for sec ref of accepted taxon
- ... and can you also please review my implementation.
- 11:54 AM feature request #10081 (In Progress): Show name in source for sec ref of accepted taxon
- I implemented the cache strategy part. Katja, can you please take over and check what needs to be done for the portal...
- 11:22 AM feature request #10081: Show name in source for sec ref of accepted taxon
- AM:
Könntest du kurz ein Beispiel geben, wie das genau formattiert werden soll? Also ob mit eckiger(?) Klammer dru... - 11:52 AM Revision 5f41e9a8 (cdmlib): ref #10081 add nameUsedIn sec source to accepted taxon cache strategy
06/24/2022
- 05:04 PM Revision 009c376e (cdmlib): code cleaning
- 05:04 PM Revision e11d6984 (cdmlib): code cleaning
- 03:13 PM Revision 7fd76b2b (cdmlib): ref #10067, ref #3722, ref #8127 preliminary add sortIndex field again to avoid problem with model cache in TaxEditor (cont. fix JAXB issue)
- 03:02 PM Revision c3d56a52 (cdmlib): cleanup
- 02:42 PM Revision 172c0b19 (cdmlib): ref #10067, ref #3722, ref #8127 preliminary add sortIndex field again to avoid problem with model cache in TaxEditor
- 01:19 PM Revision 3b96b3e5 (cdmlib): cleanup
- 01:19 PM Revision e1fe2afa (cdmlib): ref #10067, ref #3722, ref #8127 fully remove TaxonNode sortindex code from TaxonNode and CdmLight
- 01:09 PM Revision bcc64240 (cdmlib): cleanup
- 12:22 PM feature request #10081 (Closed): Show name in source for sec ref of accepted taxon
- WGB:
ich finde kein Setting, mit dem ich den Name in Source bei der sec. Ref. des [akzeptierten] Taxons ausgeben k...
06/23/2022
- 01:54 PM bug #10080 (In Progress): Source Element sometimes does not appear after selecting a new designation status and after creating a new type designation
- When selecting the designation status holotype removes the source section of the typedesignation details view.
- 01:12 PM bug #9979: Flora Greece shows large images
- Andreas Müller wrote in #note-6:
> Katja Luther wrote in #note-5:
> > This problem appears if the limit for the thumb... - 01:10 PM bug #9979: Flora Greece shows large images
- Katja Luther wrote in #note-5:
> This problem appears if the limit for the thumbnail size is smaller as the size of ... - 01:03 PM bug #9979: Flora Greece shows large images
- This problem appears if the limit for the thumbnail size is smaller as the size of the smallest representation. Then ...
- 01:06 PM task #3722: Using @OrderColumn does not work in trees
- Andreas Müller wrote in #note-15:
> Katja Luther wrote in #note-14:
> > For polytomouskey nodes there are still null ... - 12:20 PM task #3722: Using @OrderColumn does not work in trees
- Katja Luther wrote in #note-14:
> For polytomouskey nodes there are still null values, after creating a new alternat... - 10:45 AM task #3722: Using @OrderColumn does not work in trees
- For polytomouskey nodes there are still null values, after creating a new alternativ and saving the rootnode contains...
- 12:09 PM Revision 7ed19664 (cdmlib): cleanup
- 10:30 AM Revision ca55a577 (taxeditor): change suffix for ris import to ris and *
06/22/2022
- 07:39 PM bug #9979: Flora Greece shows large images
- As you currently work in this area I give this ticket to you for now.
- 07:36 PM task #8127 (Resolved): [Reminder] to check if Hibernate Null Value bug still exists
- Probably solved but still needs code cleanup.
- 07:35 PM task #3722: Using @OrderColumn does not work in trees
- Please review.
- 07:27 PM bug #10034 (Feedback): Flat feature tree throws exception
- The initial issue is fixed (or workarounded) correctly.
However, the labeling of the tree still behaves strange some... - 07:11 PM bug #10078: Symbol and details view title of misapplied name type is not the same as shown in the type combo element
- IMPORTANT:
Before closing the ticket we need to check existing data in production databases for incorrect relation... - 05:05 PM bug #10078 (Feedback): Symbol and details view title of misapplied name type is not the same as shown in the type combo element
- Seems to work correctly and code changes make sense. Can you still remove not needed commented code (and maybe also r...
- 12:04 PM bug #10078 (Resolved): Symbol and details view title of misapplied name type is not the same as shown in the type combo element
- This should be solved, please review.
- 11:34 AM bug #10078: Symbol and details view title of misapplied name type is not the same as shown in the type combo element
- Andreas Müller wrote in #note-2:
> I do not understand the title of this ticket. The problem to me seems that the se... - 11:29 AM bug #10078: Symbol and details view title of misapplied name type is not the same as shown in the type combo element
- I do not understand the title of this ticket. The problem to me seems that the selection in the dropdown is stored in...
- 11:02 AM bug #10078 (Closed): Symbol and details view title of misapplied name type is not the same as shown in the type combo element
- mail ERS:
Wenn man partial misapplication UND pro parte misapplication behalten will (den Unterschied habe ich per... - 05:08 PM bug #10056 (Closed): Make Reference.Accessed deletable in TaxEditor
- Works as expected.
- 03:54 PM bug #10079: Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- For now, I implemented the date formatting in the way that timezone information is added using the "O" format (https:...
- 03:43 PM bug #10079 (In Progress): Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- AM:
beim derzeitigen Upgrade unserer verwendeten Software Libraries fällt uns gerade wieder ein Thema auf die Füße... - 03:19 PM bug #10079: Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- Andreas Müller wrote in #note-4:
> The formatting seems to take place in name.inc, l.844 calling cdm_api.module.form... - 03:13 PM bug #10079: Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- The formatting seems to take place in name.inc, l.844 calling cdm_api.module.format_datetime() l.449 which calls strt...
- 02:53 PM bug #10079: Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- This issue is closely related to #8343
- 02:52 PM bug #10079 (In Progress): Fix timezone problems after upgrading jadira.usertype, hibernate and/or mysql drivers
- With #9359 and #10067 we upgraded hibernate and joda-time/jadira-usertype versions. Maybe also upgrading mysql-connec...
- 03:51 PM Revision 4f438db5 (cdm-dataportal): ref #10079 adapt tests to timezone handling
- 03:46 PM Revision 177a39cb (cdm-dataportal): ref #10079 add timezone to (registration) date
- 03:01 PM bug #8343 (In Progress): potential timezone problem in application stack
- IMPORTANT:
This task got a new flavour after upgrading some libraries (hibernate, jadira-usertype, mysql-connector, ... - 02:58 PM bug #8343: potential timezone problem in application stack
- Katja Luther wrote in #note-13:
> ... Actually there should be no timezone information in DATETIME??
Are we talki... - 12:03 PM Revision 898ac44b (taxeditor): ref #10078: sort the terms at the beginning.
- 11:37 AM Revision 0614271f (cdm-vaadin): cleanup and fix correct factory method usage
- 11:34 AM Revision be09d413 (cdmlib): cleanup
- 11:15 AM Revision d00d12fa (cdmlib): fix compile error for private MaterialOrMethodEvent constructor
- 11:12 AM Revision 2a7f40e5 (cdmlib): minor
- 10:57 AM Revision c5e9236a (cdmlib): ref #10067 update java-doc for and remove protected access to model constructors where possible in occurrence
- 09:44 AM Revision 08670423 (cdmlib): ref #7666 add test for pro parte MAN formatting
- 09:43 AM Revision a6d0a583 (cdmlib): cleanup
06/21/2022
- 12:04 PM Revision 51b5fd7a (cdmlib): ref #10067 update java-doc for and remove protected access to model constructors where possible
- 12:03 PM Revision 34ab2253 (cdmlib): cleanup
06/20/2022
- 02:46 PM Revision 81b378ac (cdmlib): ref #10076 fix HQL query (remove native)
- 02:43 PM Revision f47729f9 (utis-core): ref #9359 udpate enforcer plugin to 3.1.0. and log4j to 2.17.2 for utis-core
- 02:42 PM Revision 64e30c90 (cdm-webapp): ref #9359 udpate enforcer plugin to 3.1.0. for cdm-webapp
- 02:40 PM Revision bcaa3499 (cdm-vaadin): ref #9359 udpate enforcer plugin to 3.1.0. for vaadin
- 02:40 PM Revision 25ef1ef8 (cdmlib): ref #9359 udpate enforcer plugin to 3.1.0. for cdmlib
- 10:57 AM Revision eec20175 (taxeditor): ref #10033: vocabulary representation should be editable in taxeditor
- 10:42 AM Revision a543b013 (taxeditor): TaxonRelationshipTypeInverseContainer should not inherit from DefinedTermBase and use InverseTermWrapper and RelationshipTypeCombo for NameRelType and TaxonRelType
06/17/2022
- 08:54 PM Revision 9169740e (cdmlib): ref #10076 fix HQL query (remove native)
- 08:26 PM Revision 5778f462 (cdmlib): ref #10067 update java-doc for HibernateProxyHelper.deproxy (cont.)
- 08:20 PM Revision 3f11d79a (cdmlib): ref #10067 update java-doc for HibernateProxyHelper.deproxy
- 08:14 PM Revision 7d595ebb (taxeditor): ref #3722, ref #10067, ref #8127 remove childnodes nullcheck in ChecklistEditorInput
- 08:06 PM Revision 87d9741a (cdmlib): ref #10067 update java-doc for CdmBase.deproxy
- 08:05 PM Revision 3001e5ad (cdmlib): preliminary fix TaxEditor compile error due to non-protected DefinedTermBase constructor
- 07:46 PM Revision 5d6e72c2 (taxeditor): ref #10067, ref #3722 reenable and adapt readPolytomousKeyDataFromNodes() test
- 07:46 PM Revision f603e01a (taxeditor): fix order of expected and real value in test
- 07:46 PM Revision cbe3c7e4 (taxeditor): cleanup
- 05:26 PM Revision 77c9b8f8 (cdmlib): ref #3722, ref #8127, ref #10067 fully remove sortindex updating and collection null handling workaround from TaxonNode
- 05:23 PM Revision 93185e7b (cdmlib): adapt TaxonNodeService to private Representation constructor
- 04:56 PM Revision 608b3df3 (cdmlib): minor
- 04:54 PM Revision d56308b9 (cdmlib): cleanup and ref #10067 adapt some model constructors javadoc and privacy to bytebuddy
- 04:48 PM Revision 826a35b1 (cdmlib): move AvailableFor to term package
- 04:06 PM Revision 2d7694bf (cdmlib): cleanup
- 01:53 PM Revision 62c42797 (taxeditor): ref #5741: symbol and symbol2 field: add selection box and disable when selected
- 09:59 AM Revision f99e2cae (cdmlib): ref #10067 add javassist to dependency management as it is also used by iiif-apis
06/16/2022
- 11:05 PM Revision f5f8c7e7 (cdmlib): ref #10067, ref #10077 remove javassist as bytecode provider from cdmlib (fix pom)
- 10:56 PM Revision 5e6cc79c (cdmlib): minor
- 10:53 PM Revision fbc25777 (taxeditor): cleanup
- 10:46 PM Revision ea704d19 (cdm-vaadin): cleanup
- 10:31 PM Revision da5e6dc7 (cdmlib): cleanup
- 10:29 PM Revision ac512a79 (cdmlib): ref #10067, ref #10077 remove javassist as bytecode provider from cdmlib
- 09:50 PM bug #10075: Fix deserialization exception for bytebuddy base hibernate SerializableProxy
- Please review.
- 09:50 PM bug #10075: Fix deserialization exception for bytebuddy base hibernate SerializableProxy
- Fixed with a workaround by overriding the class net.sf.ehcache.util.PreferredLoaderObjectInputStream which does not c...
- 09:47 PM bug #10075 (Resolved): Fix deserialization exception for bytebuddy base hibernate SerializableProxy
- Applied in changeset commit:taxeditor|9ee1ca440a5bbe003ed1c34e8abcc9f76ec97533.
- 04:50 PM bug #10075: Fix deserialization exception for bytebuddy base hibernate SerializableProxy
- it happens in readObject0.readOrdinaryObject.readSerialData.defaultReadFields.readObject0.(TCArray)checkResolve(readA...
- 02:51 PM bug #10075 (Closed): Fix deserialization exception for bytebuddy base hibernate SerializableProxy
- ... this is related to hibernate upgrade to v5.4 (#10067)
This happens when deserializing a org.hibernate.proxy.po... - 09:47 PM Revision 9ee1ca44 (taxeditor): fix #10075 fix deserialization by overriding PreferredLoaderObjectInputStream from ehcache
- 08:48 PM Revision 15aa7a2c (cdmlib): cleanup
- 08:34 PM task #10077 (New): upgrade ehcache to 3.x
- Probably blocked by Spring upgrade to 5.x (#10216).
There is probably a duplicate #9207 which points out size, gro... - 08:33 PM Revision 35d4b554 (cdmlib): move ehcache from model to service
- 08:30 PM Revision 317ec988 (cdmlib): cleanup
- 05:51 PM Revision f73ae1d9 (cdmlib): ref #10067 add bytecodeprovider handling to CdmApplicationController
- 05:50 PM Revision 107abc23 (cdmlib): cleanup
- 04:42 PM Revision 9fb87bef (cdmlib): ref #10076: fix taxonnodeDto creation for nodes without taxon and parent
- 04:40 PM bug #10076: Exception when opening character matrix with classification as root node
- This problem appears when the root node of the descriptive dataset is a classification, which has no parent node and ...
- 04:39 PM bug #10076 (Closed): Exception when opening character matrix with classification as root node
- mail Konstantina Koutroumpa:
Dear Katja and Andreas,
I am getting an error when opening the character matrix in... - 11:20 AM bug #8343: potential timezone problem in application stack
- Locally I added the timezone to the out put and for http://phycobank.org/100158 the timezone was CEST and for http:/...
- 09:14 AM bug #8343: potential timezone problem in application stack
- Andreas Müller wrote in #note-9:
> Andreas Kohlbecker wrote in #note-8:
> > Andreas Müller wrote in #note-7:
> > > Is... - 08:36 AM feature request #10074 (New): Areas for common names should be a set
- mail ERS:
Hallo,
bei der Eingabe von Common Names ist mir gerade aufgefallen, dass es die Möglichkeit geben sol...
06/15/2022
- 01:06 PM Revision 3a976bf6 (taxeditor): cleanup
- 12:05 PM Revision 00ee5645 (taxeditor): ref #9359 upgrade maven-antrun-plugin to 3.1.0 in taxeditor
- 12:04 PM Revision 25436749 (taxeditor): cleanup
06/14/2022
- 10:52 PM Revision bedb5de8 (taxeditor): ref #9359 remove old Spring Source repositories from taxeditor cdmlib and local
- 10:48 PM Revision d336a791 (taxeditor): java-doc
- 04:21 PM Revision 3b1474a6 (taxeditor): ref #9359 add javax.annotation to import packages in MANIFEST.MFs
- 04:00 PM Revision 0561a2fc (taxeditor): cleanup
- 03:58 PM Revision df1cedb8 (taxeditor): ref #9359 add commons-collections4 to taxeditor dependencies
- 02:26 PM Revision fe32c5ea (taxeditor): remove store from required bundles in store MANIFEST.MF
- 12:31 PM Revision 907e7ec4 (cdmlib): use tuple class as return type
- 09:46 AM Revision ac2536fb (cdmlib): fix hibernate problem with returntype and taxonnodeDto for missing publish flag
- 12:03 AM Revision 328d91f0 (taxeditor): ref #9359 remove log4j12 exports from taxeditor.cdmlib MANIFEST.MF
06/13/2022
- 11:55 PM Revision 7872e2e8 (taxeditor): cleanup
- 11:06 PM Revision 926a7e65 (taxeditor): ref #9359 add taxeditor.local log4j2 to gitignore
- 11:03 PM Revision 23a596af (taxeditor): cleanup
- 11:03 PM Revision 62966b18 (taxeditor): fix remotingApplicationContext.xml
- 11:01 PM Revision 002dd8ef (taxeditor): remove whitespace from workbench MANIFEST.MF
- 02:21 PM Revision 4dcfee27 (cdm-dataportal): adapt test
- 02:03 PM Revision d0b78a25 (cdm-dataportal): ref #9359 upgrade java dependencies in dataportal (except for selenium)
- 10:46 AM bug #7635: ObjectNotFoundException during delete of synonym and name
- Maybe this is a similar problem:
Hallo,
Caryophyllales_spp
Habe bei Sebsebia orthacantha, Synonym Kyphocarpa ort... - 10:26 AM Revision c0497e2d (cdmlib): ref #10071: add statusNote to dto again
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