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From 04/03/2022 to 05/02/2022

05/02/2022

02:41 PM bug #9917 (Closed): etopo1 broken due to server migration at noaa.gov
tested the changes, additionaly removed the etopo1 entries in configuration table. Katja Luther
02:40 PM bug #9917: etopo1 broken due to server migration at noaa.gov
Applied in changeset commit:cdm-dataportal|3844ef1e68d48ab58fa0d1d292e68fef149abf2a. Katja Luther
02:40 PM Revision 3844ef1e (cdm-dataportal): fix #9917: remove etopo1 and add update script
Katja Luther
09:54 AM task #10052 (New): Check if JReleaser could be helpful
https://www.heise.de/news/JReleaser-1-0-0-Release-Automatisierung-fuer-Java-und-andere-Projekte-6669624.html Andreas Müller

04/29/2022

03:17 PM bug #9646 (Closed): CDM Light: Add name relationship to concatenated string for homotypic group
Katja Luther wrote in #note-4:
> this is fixed, last review of Walter and Nadja is needed.
As this is in producti...
Katja Luther
03:16 PM feature request #10020 (Closed): Add media transformation for new BGBM mediahub image server
Andreas Müller wrote in #note-3:
> Can you please review.
The tests look reasonable and work, so I think we can c...
Katja Luther
03:13 PM bug #8600 (Closed): Taxon Navigator: tree no longer scrolls while draging a taxon node
This is fixed, this should be around the version 5.9 Katja Luther
03:03 PM bug #10038: NPE when editing multilanguage support
This should be fixed. Please review. Katja Luther
03:01 PM feature request #9541 (Closed): Improve referencing objects handling
Works fine and open issues are moved to a new ticket. Katja Luther
03:00 PM bug #10051 (New): Remaining issues for Referencing Objects View
open issues from #9541:
* improved formatting for all CdmBase classes (some formatting also seems to have regressi...
Katja Luther
02:57 PM feature request #9071 (Closed): Implement formatter for TimePeriod, VerbatimTimePeriod and ExtendedTimePeriod
This is fixed Katja Luther
02:56 PM bug #8526 (Closed): Swap synonym with accepted taxon does not work
Katja Luther
02:56 PM bug #8526: Swap synonym with accepted taxon does not work
As this is already in production since 5.9 we can close this ticket Katja Luther
02:55 PM bug #6627 (Closed): Remaining cdm light issues
Close this ticket because a new ticket with remaining issues are created, the blocking ticket is now a related ticket. Katja Luther
02:50 PM feature request #7158 (Feedback): Add pro parte misapplied name to the concept relationship types
Katja Luther wrote in #note-10:
> the search especially of the standard search looks correct.
> @AK please review t...
Katja Luther
02:35 PM bug #6730 (Resolved): Deleting media leads to inconsistent data
I think we can close this ticket now? Katja Luther
02:33 PM bug #6730: Deleting media leads to inconsistent data
Andreas Müller wrote in #note-28:
> Andreas Müller wrote in #note-25:
> > Sorry if I have even one more issue. Look...
Katja Luther
02:07 PM feature request #5346: Allow 3 ways of ordering in Taxon Navigator
Everything is done, except a translation for sibbling in terms of trees? "Geschwister" sounds not very nice, actually... Katja Luther

04/28/2022

02:37 PM feature request #5346: Allow 3 ways of ordering in Taxon Navigator
Andreas Müller wrote in #note-11:
> What exactly is the reason, why taxa can't be moved in between 2 other taxa? Cur...
Katja Luther
02:32 PM Revision 5203542c (cdmlib): minor
Katja Luther
02:04 PM feature request #10050 (In Progress): Add missing functionality for MCL CDM dataportal
Once the MCL migrated to CDM all functionality of the MCL dataportal should be implemented also in CDM dataportals.
...
Andreas Müller
11:55 AM Revision 2a648cc6 (taxeditor): ref #5346: adapt label and fix order of dialogs
Katja Luther
11:39 AM task #7404: Add linux and mac to editor installation documentation
MAC version will be written by NaK Andreas Müller

04/27/2022

02:20 PM task #10010 (Closed): Install Spanish for Mexico Eflora dataportal
There is still a problem with textes below the search field, see #10045
but the rest is solved, so we can close this...
Katja Luther
01:32 PM task #10010: Install Spanish for Mexico Eflora dataportal
mail WB:
Hallo
im Advanced Search – Tab:
By content category – Según la categoría de contenido
Unter der Sucheing...
Katja Luther
01:03 PM task #10046 (New): Upgrade TaxEditor to java 11
Andreas Müller
12:56 PM bug #10044: Maps in Flore Du Gabon are broken
https://portal.cybertaxonomy.org/flore-gabon/cdm_dataportal/taxon/103571e4-7507-4f99-b975-1eedbca6e99d
does not work
Katja Luther
12:55 PM bug #10044: Maps in Flore Du Gabon are broken
There are pages where the maps work: https://portal.cybertaxonomy.org/flore-gabon/cdm_dataportal/taxon/f1c07476-4cf1-... Andreas Müller
12:47 PM bug #10038 (Resolved): NPE when editing multilanguage support
Andreas Müller
12:17 PM bug #10045 (In Progress): Open issues when updating portal translations
Katja Luther
10:30 AM bug #10045 (New): Open issues when updating portal translations
#5911 and [[edit:CdmDataportalMultilingual]] describe how to add and update a translation file.
* Actually the dr...
Katja Luther
12:15 PM task #8863 (In Progress): Create full documentation on multilingual setup of the Data Portal
Andreas Müller
12:13 PM bug #9990: Improve TaxEditor documentation
We need to decide if we do this now or in a later milestone Andreas Müller

04/26/2022

12:52 PM Revision a51d69a1 (cdm-dataportal): changes in spanish translations
Katja Luther

04/25/2022

03:24 PM bug #10044: Maps in Flore Du Gabon are broken
Not sure, but for FdG maybe the areas are simply not mapped. But if this is the case I wonder why maps are switched on. Andreas Müller
03:23 PM bug #10044: Maps in Flore Du Gabon are broken
Please add an example URL Andreas Müller
02:31 PM bug #10044 (Closed): Maps in Flore Du Gabon are broken
![](Screenshot 2022-04-25 143146.png)
No maps are displayed, only an error message.
Katja Luther

04/14/2022

12:57 PM Revision f89d7010 (cdm-dataportal): fix some typos
Katja Luther
12:42 PM Revision fd70850f (cdm-dataportal): add missing translations - continue
Katja Luther
12:39 PM Revision 1d0bce8b (cdm-dataportal): add missing translations - continue
Katja Luther
12:13 PM Revision 71083aff (cdm-dataportal): add missing translations
Katja Luther

04/13/2022

12:15 PM bug #10039: The specimen table tree shows missing date parts as "?"
This should be fixed with parsing the partial. Katja Luther
12:14 PM bug #10039 (Resolved): The specimen table tree shows missing date parts as "?"
Applied in changeset commit:cdm-dataportal|c2abfbb5280dc63e78d082d0c8a9d590af982329. Katja Luther
12:14 PM Revision c2abfbb5 (cdm-dataportal): fix #10039: parse partial
Katja Luther
10:49 AM bug #10012 (In Progress): Fix failing SpecimensTreeViewTest for dataportals after debian11 migration
* The problem is caused by the Specimen CEDiT 2017E68. If this is used as SpecimenTypedesignation or the taxon is use... Katja Luther

04/12/2022

02:34 PM Revision 297f7967 (cdm-dataportal): fix exception because of empty value
Katja Luther
12:07 PM bug #10012: Fix failing SpecimensTreeViewTest for dataportals after debian11 migration
Tested the tree view with local portal installation connected to the same cdm instance (https://int.e-taxonomy.eu/cdm... Katja Luther

04/08/2022

11:11 AM Revision c1e3bf07 (taxeditor): comment out admin preference pages actually not implemented
Katja Luther
11:08 AM Revision f09ac804 (taxeditor): ref #10038: fix NPE in preference page
Katja Luther
10:03 AM bug #6116: Advanced Search area filter layout needs to be improved
An example with 3 vocabularies: https://efloramex.ib.unam.mx/cdm_dataportal/search Andreas Müller

04/07/2022

10:39 PM feature request #10041 (New): Make formatting language/locale dependent
Generally all formatter (once unified) should also have an invoke method including a locale parameter.
For referen...
Andreas Müller
10:35 PM feature request #10040 (New): Allow an own TaxonName type for Pseudo-Taxa
or better Pseudo-Taxon names.
This could be a i18n String only instead of all other TaxonName attributes.
Add t...
Andreas Müller
09:44 PM bug #10039: The specimen table tree shows missing date parts as "?"
![](clipboard-202204072143-nckpl.png)
Andreas Müller
09:43 PM bug #10039 (Closed): The specimen table tree shows missing date parts as "?"
e.g. https://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/ecb7a76e-694a-4706-b1ab-a2eb334173ff/specimens
...
Andreas Müller
04:06 PM bug #3536 (Resolved): Incorrect last version documentation for Editor
Still needs to be checked for success after next release. Andreas Müller
04:04 PM Revision 624d6b03 (taxeditor): Remove AK from the list of active developers for TaxEditor
Andreas Müller
04:03 PM Revision dfed0086 (taxeditor): ref #3536 remove changes.xml from TaxEditor site
Andreas Müller
04:01 PM Revision 39babfd9 (taxeditor): cleanup
Andreas Müller
03:32 PM Revision b1590a17 (cdmlib): cleanup
Andreas Müller
02:19 PM task #10010 (Resolved): Install Spanish for Mexico Eflora dataportal
Should be resolved. Walter, can you please review? Andreas Müller
02:08 PM bug #10038 (Closed): NPE when editing multilanguage support
mail AM:
Beim Einstellen der Languages in DB Preferences – Language- MultiLanguageSupport
nach Auswahl bestimmt...
Katja Luther
02:03 PM bug #9776 (Closed): Enforce cdm webservice access via https when pages are requested via this schema
This works now. Katja Luther
10:03 AM bug #9776: Enforce cdm webservice access via https when pages are requested via this schema
The uris of the icons for the maps moved to https. We may check whether there are still elements called with http, bu... Katja Luther
10:51 AM Revision 8bb3bdbf (cdm-vaadin): ref #10037 fixed type in error message for self registration
Andreas Müller
10:48 AM Revision fa10645a (cdmlib): cleanup
Andreas Müller
10:48 AM Revision 0d1c03f7 (cdm-vaadin): cleanup
Andreas Müller
10:29 AM feature request #10036 (New): Allow description sources to have nameUsedInSource
Similar to description element sources sources for description (datasets) usually refer to a taxon name which may dif... Andreas Müller

04/06/2022

11:28 PM task #9974 (Closed): Upgrade edit-production
Andreas Müller
11:27 PM task #9973 (Closed): Upgrade edit-database
Andreas Müller
11:03 PM task #9972 (Closed): Upgrade edit-integration
Andreas Müller
10:42 PM bug #9776 (In Progress): Enforce cdm webservice access via https when pages are requested via this schema
Andreas Müller
01:29 PM bug #9776: Enforce cdm webservice access via https when pages are requested via this schema
Now all webservice calls are redirected to https, but the warning still exist for the maps on specimen page. Katja Luther
06:00 PM bug #10033: For new FeatureTree only uuid is shown in dataportal
The problem appears if the tree has only a protected titleCache but no presentation. Looks like the portal code does ... Andreas Müller
09:42 AM bug #10033 (Closed): For new FeatureTree only uuid is shown in dataportal
mail WB:
in der Portal Konfiguration kann ich den neuen Feature tree auswählen, aber im Gegensatz zu den anderen v...
Katja Luther
05:56 PM bug #10034: Flat feature tree throws exception
The problem does only seem to appear if you try to move a node before you save. If you try to move there comes a mess... Andreas Müller
05:49 PM bug #10034: Flat feature tree throws exception
Error was:
~~~
last remote method : http://132.248.13.83:8080/cdmserver/cdm_flora_mexico/remoting/termnode.servic...
Andreas Müller
09:43 AM bug #10034 (Closed): Flat feature tree throws exception
mail WB:
für Mexico wollte ich einen neuen, sehr reduzierten feature tree erzeugen:

Beim Speichern kommt fol...
Katja Luther
05:55 PM Revision b246197c (cdm-server): Merge branch 'release/5.31.0' into develop
jenkins
05:55 PM Revision 0e3bd655 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
05:54 PM Revision 77cf56d6 (cdm-server): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:52 PM Revision 51f82de5 (cdm-webapp): Merge branch 'release/5.31.0' into develop
jenkins
05:52 PM Revision 99091b20 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
05:51 PM Revision ef5b85af (cdm-webapp): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:51 PM Revision 479f3d7e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.31.0
jenkins
05:32 PM Revision 85aed8cb (cdm-vaadin): Merge branch 'release/5.31.0' into develop
jenkins
05:32 PM Revision 6f1fc289 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
05:31 PM Revision 5b1d7459 (taxeditor): Merge branch 'release/5.31.0' into develop
jenkins
05:31 PM Revision dfc00a97 (taxeditor): Merge branch 'release/5.31.0'
jenkins
05:29 PM Revision 585a362f (cdm-vaadin): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:28 PM Revision 9edcb780 (cdm-vaadin): jenkins bumping cdmlib.version to 5.31.0
jenkins
05:27 PM Revision 11540b79 (cdm-dataportal): Merge branch 'release/5.31.0' into develop
jenkins
05:27 PM Revision a13b5a39 (cdm-dataportal): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:27 PM Revision 5c0c3e8b (cdm-dataportal): release-preparation: production level css
jenkins
05:25 PM Revision ba89530e (cdmlib): Updating develop poms back to pre merge state
jenkins
05:25 PM Revision 5c74c4a4 (cdmlib): Merge branch 'master' into develop
jenkins
05:25 PM Revision f13c8432 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
05:25 PM Revision 91096b61 (cdmlib): Merge branch 'release/5.31.0'
jenkins
05:04 PM Revision dc2f744e (cdmlib): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
03:58 PM Revision 66048a89 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.31.0-SNAPSHOT
jenkins
03:58 PM Revision c3e86551 (cdm-webapp): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:58 PM Revision 89c3c114 (cdm-webapp): updating poms for 5.31.0 branch with snapshot versions
jenkins
03:58 PM Revision 7eca0acc (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.32.0-SNAPSHOT
jenkins
03:57 PM Revision debd78cd (taxeditor): Updated version in pom / project files to taxeditor version : 5.32.0-SNAPSHOT and cdmlib version : 5.32.0-SNAPSHOT
jenkins
03:57 PM Revision bf82f5ae (taxeditor): Updated version in pom / project files to taxeditor version : 5.31.0 and cdmlib version : 5.31.0
jenkins
03:56 PM Revision 3799e07f (cdm-vaadin): jenkins bumping cdmlib.version to 5.31.0-SNAPSHOT
jenkins
03:56 PM Revision 244b7402 (cdm-vaadin): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:56 PM Revision 78b74826 (cdm-vaadin): updating poms for 5.31.0 branch with snapshot versions
jenkins
03:56 PM Revision e06ba605 (cdm-vaadin): jenkins bumping cdmlib.version to 5.32.0-SNAPSHOT
jenkins
03:55 PM Revision 082f704f (cdm-dataportal): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:55 PM Revision 92dc87c9 (cdm-server): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:52 PM Revision bff55e97 (cdmlib): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:49 PM Revision 5252f023 (taxeditor): ref #4601 adapt server info for cybertaxonomy.org to use https port
Andreas Müller
02:27 PM Revision 79ce0b2b (cdmlib): use https for kml icons
Katja Luther
01:07 PM Revision f81c688d (taxeditor): ref #9939: fix layout issue
Katja Luther

04/05/2022

09:37 PM task #9971 (Closed): Upgrade edit-test
Andreas Müller
07:39 PM feature request #10020: Add media transformation for new BGBM mediahub image server
Can you please review. Andreas Müller
07:38 PM task #9999 (Closed): Improve formatting for referencing objects of descriptive data
For now implementing all descriptive data formatting is enough. Open new ticket for further classes if needed. Andreas Müller
07:36 PM Revision 3189fb06 (cdmlib): ref #9999 NPE fix in referencing object formatting
Andreas Müller
07:34 PM Revision 715296b9 (cdmlib): ref #9999 add referencing object formatting for quantitative data, temporal data and individual associations
Andreas Müller
06:16 PM feature request #4682: [DISCUSS] Do we need an explanation/reason field in RelationBase
We will not implement this for "Moose" therefore remove it from parent and link it instead. Move to UML milestone Andreas Müller
06:14 PM discussion #6613 (Closed): Interesting examples for good documentation
Most interesting is the beautiful-docs link. Andreas Müller
02:51 PM feature request #5346 (Feedback): Allow 3 ways of ordering in Taxon Navigator
What exactly is the reason, why taxa can't be moved in between 2 other taxa? Currently you always get asked if you wa... Andreas Müller
02:40 PM feature request #5836 (Closed): Rename the abbrev titlecache in Reference Details View
I think we can keep it as it is, now. We will think about it again if a user complains. Andreas Müller
12:44 PM task #9993 (Closed): Move markdown from code to developer wiki
Katja Luther
11:26 AM task #9954 (Closed): Refactor EDIT Platform (Wiki) Documentation
The wiki pages have been reordered and hierarchically structured. Parent pages were created. Decisions about how and ... Andreas Müller
11:04 AM task #10032 (New): Create media metadata service documentation
see #9954 Andreas Müller
10:59 AM task #10031 (New): Update geographic components documentation
see #9954
[[GeographicComponents]]
Andreas Müller
10:52 AM task #10030 (New): Update Phycobank and Webeditor documentation
see #9954 Andreas Müller
10:31 AM task #10029 (New): Update other main groups and main page
see #9954
include main page and sidebar
Andreas Müller
10:30 AM task #10028 (New): Update Taxonomy Notes
see #9954 Andreas Müller
10:28 AM task #10027 (New): Update DevelopmentNotes
see #9954 Andreas Müller
10:27 AM task #10026 (New): Update DataModelsAndFormats
see #9954 Andreas Müller
10:24 AM task #10025 (New): Update other platform pages in wiki
see #9954
Includes updating the use-cases
Andreas Müller
10:23 AM task #10024 (New): Update other platform components documentation
see #9954 Andreas Müller
10:21 AM task #10023 (New): Update CDM Server documentation
Also link "CDM Services" to a CDM Service description page, not directly to Swagger/OpenAPI. Decided https://wiki.bgb... Andreas Müller
10:16 AM feature request #10022 (New): Add Factory Class for TermVocabularies
mail AM:
ich bin gerade zufällig über deinen Commit zu CreateTermVocabularyOperation gestoßen.
Da wird OrderedTe...
Katja Luther
10:06 AM Revision e42ad559 (taxeditor): use newInstance method of OrderedTermVocabulary for ORderedTermVocabularies
Katja Luther
09:53 AM Revision 3da38d99 (taxeditor): fix NPE when no preference for terms available
Katja Luther

04/04/2022

08:57 PM task #10000 (Closed): Celebrate ticket no. 10,000
I think we celebrated long enough, now ;-) Andreas Müller
08:55 PM bug #10016 (Closed): NPE after move of taxon
Seems to work as expected and code changes look reasonable. Andreas Müller
08:43 PM feature request #9939: Implement specimen status in TaxEditor
Andreas Müller wrote in #note-17:
> Issues 2 and 3 are of general interest for al such lists and collapsed sections....
Andreas Müller
08:39 PM feature request #9939 (Closed): Implement specimen status in TaxEditor
Works as expected now. Andreas Müller
08:42 PM feature request #10021 (New): Add concatenated label instead of "+" beside section label for collections
Section labels for collections in details view and others do only show a "+" if data is available. Instead we could s... Andreas Müller
08:19 PM Revision eebe266a (taxeditor): cleanup
Andreas Müller
07:38 PM feature request #10020 (Resolved): Add media transformation for new BGBM mediahub image server
Applied in changeset commit:cdmlib|c77a9a7fe36610a33703e7b150e1b27e2f617bfc. Andreas Müller
04:38 PM feature request #10020 (Closed): Add media transformation for new BGBM mediahub image server
see #9998 Andreas Müller
07:38 PM Revision c77a9a7f (cdmlib): fix #10020 add mediahub to metadataservice transformation including tests
Andreas Müller
04:39 PM task #9998 (Closed): Update image links for cyprus
Adaptation of media metadata service moved to new ticket: #10020 Andreas Müller
03:58 PM task #9998 (Resolved): Update image links for cyprus
Applied in changeset commit:cdmlib-apps|9c133c4bc061f4236d51a2e4ac98d92ec9758488. Andreas Müller
03:58 PM Revision 621d4229 (cdmlib-apps): ref #9932 some late minor changes to MexicoEflora imports
Andreas Müller
03:57 PM Revision 9c133c4b (cdmlib-apps): fix #9998 add CyprusNewImageUpdaterActivator
Andreas Müller
03:57 PM Revision d6820921 (cdmlib-apps): cleanup
Andreas Müller
02:52 PM task #9993 (Resolved): Move markdown from code to developer wiki
Katja Luther wrote in #note-12:
> copied vaadin configuration description to wiki (https://dev.e-taxonomy.eu/redmine...
Katja Luther
02:51 PM task #9993: Move markdown from code to developer wiki
copied vaadin configuration description to wiki (https://dev.e-taxonomy.eu/redmine/projects/algenregistrierung/wiki/C... Katja Luther
02:48 PM task #2091 (Resolved): Improve DataPortal documentation
Restructured pages and removed outdated pages. Documentation of installation issues improved. Katja Luther
02:32 PM Revision 0f07b589 (utis-core): ref #9993: move utis core developer instructions to wiki
Katja Luther
02:31 PM Revision 228eabdb (utis-webapp): ref #9993: move utis webapp developer instructions to wiki
Katja Luther
01:56 PM Revision a0a470f6 (cdm-vaadin): ref #9993: move vaadin developer instructions to wiki
Katja Luther
12:38 PM Revision bc572502 (cdmlib): fix case statement
Katja Luther
11:46 AM Revision 8b4dbfe6 (cdm-dataportal): ref #9993: move information from md to developer wiki
Katja Luther
11:25 AM Revision 8a46c985 (cdmlib): fix case statement
Katja Luther
10:29 AM bug #10018 (New): Add Operation to add a name in source to all facts of a factual data set
We need a possibility to add a name in source to all facts in a factual data set.
Maybe we should offer that the na...
Katja Luther
10:20 AM Revision 092e384a (taxeditor): adapt to changes ingetEmptyDefinedTermBase
Katja Luther
10:15 AM Revision 798be028 (cdmlib): better handling of createEmptyTerm with language
Katja Luther
 

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