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From 03/08/2022 to 04/06/2022

04/06/2022

11:28 PM task #9974 (Closed): Upgrade edit-production
Andreas Müller
11:27 PM task #9973 (Closed): Upgrade edit-database
Andreas Müller
11:03 PM task #9972 (Closed): Upgrade edit-integration
Andreas Müller
10:42 PM bug #9776 (In Progress): Enforce cdm webservice access via https when pages are requested via this schema
Andreas Müller
01:29 PM bug #9776: Enforce cdm webservice access via https when pages are requested via this schema
Now all webservice calls are redirected to https, but the warning still exist for the maps on specimen page. Katja Luther
06:00 PM bug #10033: For new FeatureTree only uuid is shown in dataportal
The problem appears if the tree has only a protected titleCache but no presentation. Looks like the portal code does ... Andreas Müller
09:42 AM bug #10033 (In Progress): For new FeatureTree only uuid is shown in dataportal
mail WB:
in der Portal Konfiguration kann ich den neuen Feature tree auswählen, aber im Gegensatz zu den anderen v...
Katja Luther
05:56 PM bug #10034: Flat feature tree throws exception
The problem does only seem to appear if you try to move a node before you save. If you try to move there comes a mess... Andreas Müller
05:49 PM bug #10034: Flat feature tree throws exception
Error was:
~~~
last remote method : http://132.248.13.83:8080/cdmserver/cdm_flora_mexico/remoting/termnode.servic...
Andreas Müller
09:43 AM bug #10034 (New): Flat feature tree throws exception
mail WB:
für Mexico wollte ich einen neuen, sehr reduzierten feature tree erzeugen:

Beim Speichern kommt fol...
Katja Luther
05:55 PM Revision b246197c (cdm-server): Merge branch 'release/5.31.0' into develop
jenkins
05:55 PM Revision 0e3bd655 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
05:54 PM Revision 77cf56d6 (cdm-server): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:52 PM Revision 51f82de5 (cdm-webapp): Merge branch 'release/5.31.0' into develop
jenkins
05:52 PM Revision 99091b20 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
05:51 PM Revision ef5b85af (cdm-webapp): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:51 PM Revision 479f3d7e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.31.0
jenkins
05:32 PM Revision 85aed8cb (cdm-vaadin): Merge branch 'release/5.31.0' into develop
jenkins
05:32 PM Revision 6f1fc289 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
05:31 PM Revision 5b1d7459 (taxeditor): Merge branch 'release/5.31.0' into develop
jenkins
05:31 PM Revision dfc00a97 (taxeditor): Merge branch 'release/5.31.0'
jenkins
05:29 PM Revision 585a362f (cdm-vaadin): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:28 PM Revision 9edcb780 (cdm-vaadin): jenkins bumping cdmlib.version to 5.31.0
jenkins
05:27 PM Revision 11540b79 (cdm-dataportal): Merge branch 'release/5.31.0' into develop
jenkins
05:27 PM Revision a13b5a39 (cdm-dataportal): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
05:27 PM Revision 5c0c3e8b (cdm-dataportal): release-preparation: production level css
jenkins
05:25 PM Revision ba89530e (cdmlib): Updating develop poms back to pre merge state
jenkins
05:25 PM Revision 5c74c4a4 (cdmlib): Merge branch 'master' into develop
jenkins
05:25 PM Revision f13c8432 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
05:25 PM Revision 91096b61 (cdmlib): Merge branch 'release/5.31.0'
jenkins
05:04 PM Revision dc2f744e (cdmlib): updating poms for branch'release/5.31.0' with non-snapshot versions
jenkins
03:58 PM Revision 66048a89 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.31.0-SNAPSHOT
jenkins
03:58 PM Revision c3e86551 (cdm-webapp): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:58 PM Revision 89c3c114 (cdm-webapp): updating poms for 5.31.0 branch with snapshot versions
jenkins
03:58 PM Revision 7eca0acc (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.32.0-SNAPSHOT
jenkins
03:57 PM Revision debd78cd (taxeditor): Updated version in pom / project files to taxeditor version : 5.32.0-SNAPSHOT and cdmlib version : 5.32.0-SNAPSHOT
jenkins
03:57 PM Revision bf82f5ae (taxeditor): Updated version in pom / project files to taxeditor version : 5.31.0 and cdmlib version : 5.31.0
jenkins
03:56 PM Revision 3799e07f (cdm-vaadin): jenkins bumping cdmlib.version to 5.31.0-SNAPSHOT
jenkins
03:56 PM Revision 244b7402 (cdm-vaadin): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:56 PM Revision 78b74826 (cdm-vaadin): updating poms for 5.31.0 branch with snapshot versions
jenkins
03:56 PM Revision e06ba605 (cdm-vaadin): jenkins bumping cdmlib.version to 5.32.0-SNAPSHOT
jenkins
03:55 PM Revision 082f704f (cdm-dataportal): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:55 PM Revision 92dc87c9 (cdm-server): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:52 PM Revision bff55e97 (cdmlib): updating poms for 5.32.0-SNAPSHOT development
jenkins
03:49 PM Revision 5252f023 (taxeditor): ref #4601 adapt server info for cybertaxonomy.org to use https port
Andreas Müller
02:27 PM Revision 79ce0b2b (cdmlib): use https for kml icons
Katja Luther
01:07 PM Revision f81c688d (taxeditor): ref #9939: fix layout issue
Katja Luther

04/05/2022

09:37 PM task #9971 (Closed): Upgrade edit-test
Andreas Müller
07:39 PM feature request #10020: Add media transformation for new BGBM mediahub image server
Can you please review. Andreas Müller
07:38 PM task #9999 (Closed): Improve formatting for referencing objects of descriptive data
For now implementing all descriptive data formatting is enough. Open new ticket for further classes if needed. Andreas Müller
07:36 PM Revision 3189fb06 (cdmlib): ref #9999 NPE fix in referencing object formatting
Andreas Müller
07:34 PM Revision 715296b9 (cdmlib): ref #9999 add referencing object formatting for quantitative data, temporal data and individual associations
Andreas Müller
06:16 PM feature request #4682: [DISCUSS] Do we need an explanation/reason field in RelationBase
We will not implement this for "Moose" therefore remove it from parent and link it instead. Move to UML milestone Andreas Müller
06:14 PM discussion #6613 (Closed): Interesting examples for good documentation
Most interesting is the beautiful-docs link. Andreas Müller
02:51 PM feature request #5346 (Feedback): Allow 3 ways of ordering in Taxon Navigator
What exactly is the reason, why taxa can't be moved in between 2 other taxa? Currently you always get asked if you wa... Andreas Müller
02:40 PM feature request #5836 (Closed): Rename the abbrev titlecache in Reference Details View
I think we can keep it as it is, now. We will think about it again if a user complains. Andreas Müller
12:44 PM task #9993 (Closed): Move markdown from code to developer wiki
Katja Luther
11:26 AM task #9954 (Closed): Refactor EDIT Platform (Wiki) Documentation
The wiki pages have been reordered and hierarchically structured. Parent pages were created. Decisions about how and ... Andreas Müller
11:04 AM task #10032 (New): Create media metadata service documentation
see #9954 Andreas Müller
10:59 AM task #10031 (New): Update geographic components documentation
see #9954
[[GeographicComponents]]
Andreas Müller
10:52 AM task #10030 (New): Update Phycobank and Webeditor documentation
see #9954 Andreas Müller
10:31 AM task #10029 (New): Update other main groups and main page
see #9954
include main page and sidebar
Andreas Müller
10:30 AM task #10028 (New): Update Taxonomy Notes
see #9954 Andreas Müller
10:28 AM task #10027 (New): Update DevelopmentNotes
see #9954 Andreas Müller
10:27 AM task #10026 (New): Update DataModelsAndFormats
see #9954 Andreas Müller
10:24 AM task #10025 (New): Update other platform pages in wiki
see #9954
Includes updating the use-cases
Andreas Müller
10:23 AM task #10024 (New): Update other platform components documentation
see #9954 Andreas Müller
10:21 AM task #10023 (New): Update CDM Server documentation
Also link "CDM Services" to a CDM Service description page, not directly to Swagger/OpenAPI. Decided https://wiki.bgb... Andreas Müller
10:16 AM feature request #10022 (New): Add Factory Class for TermVocabularies
mail AM:
ich bin gerade zufällig über deinen Commit zu CreateTermVocabularyOperation gestoßen.
Da wird OrderedTe...
Katja Luther
10:06 AM Revision e42ad559 (taxeditor): use newInstance method of OrderedTermVocabulary for ORderedTermVocabularies
Katja Luther
09:53 AM Revision 3da38d99 (taxeditor): fix NPE when no preference for terms available
Katja Luther

04/04/2022

08:57 PM task #10000 (Closed): Celebrate ticket no. 10,000
I think we celebrated long enough, now ;-) Andreas Müller
08:55 PM bug #10016 (Closed): NPE after move of taxon
Seems to work as expected and code changes look reasonable. Andreas Müller
08:43 PM feature request #9939: Implement specimen status in TaxEditor
Andreas Müller wrote in #note-17:
> Issues 2 and 3 are of general interest for al such lists and collapsed sections....
Andreas Müller
08:39 PM feature request #9939 (Closed): Implement specimen status in TaxEditor
Works as expected now. Andreas Müller
08:42 PM feature request #10021 (New): Add concatenated label instead of "+" beside section label for collections
Section labels for collections in details view and others do only show a "+" if data is available. Instead we could s... Andreas Müller
08:19 PM Revision eebe266a (taxeditor): cleanup
Andreas Müller
07:38 PM feature request #10020 (Resolved): Add media transformation for new BGBM mediahub image server
Applied in changeset commit:cdmlib|c77a9a7fe36610a33703e7b150e1b27e2f617bfc. Andreas Müller
04:38 PM feature request #10020 (Closed): Add media transformation for new BGBM mediahub image server
see #9998 Andreas Müller
07:38 PM Revision c77a9a7f (cdmlib): fix #10020 add mediahub to metadataservice transformation including tests
Andreas Müller
04:39 PM task #9998 (Closed): Update image links for cyprus
Adaptation of media metadata service moved to new ticket: #10020 Andreas Müller
03:58 PM task #9998 (Resolved): Update image links for cyprus
Applied in changeset commit:cdmlib-apps|9c133c4bc061f4236d51a2e4ac98d92ec9758488. Andreas Müller
03:58 PM Revision 621d4229 (cdmlib-apps): ref #9932 some late minor changes to MexicoEflora imports
Andreas Müller
03:57 PM Revision 9c133c4b (cdmlib-apps): fix #9998 add CyprusNewImageUpdaterActivator
Andreas Müller
03:57 PM Revision d6820921 (cdmlib-apps): cleanup
Andreas Müller
02:52 PM task #9993 (Resolved): Move markdown from code to developer wiki
Katja Luther wrote in #note-12:
> copied vaadin configuration description to wiki (https://dev.e-taxonomy.eu/redmine...
Katja Luther
02:51 PM task #9993: Move markdown from code to developer wiki
copied vaadin configuration description to wiki (https://dev.e-taxonomy.eu/redmine/projects/algenregistrierung/wiki/C... Katja Luther
02:48 PM task #2091 (Resolved): Improve DataPortal documentation
Restructured pages and removed outdated pages. Documentation of installation issues improved. Katja Luther
02:32 PM Revision 0f07b589 (utis-core): ref #9993: move utis core developer instructions to wiki
Katja Luther
02:31 PM Revision 228eabdb (utis-webapp): ref #9993: move utis webapp developer instructions to wiki
Katja Luther
01:56 PM Revision a0a470f6 (cdm-vaadin): ref #9993: move vaadin developer instructions to wiki
Katja Luther
12:38 PM Revision bc572502 (cdmlib): fix case statement
Katja Luther
11:46 AM Revision 8b4dbfe6 (cdm-dataportal): ref #9993: move information from md to developer wiki
Katja Luther
11:25 AM Revision 8a46c985 (cdmlib): fix case statement
Katja Luther
10:29 AM bug #10018 (New): Add Operation to add a name in source to all facts of a factual data set
We need a possibility to add a name in source to all facts in a factual data set.
Maybe we should offer that the na...
Katja Luther
10:20 AM Revision 092e384a (taxeditor): adapt to changes ingetEmptyDefinedTermBase
Katja Luther
10:15 AM Revision 798be028 (cdmlib): better handling of createEmptyTerm with language
Katja Luther

04/01/2022

03:29 PM Revision 4592baa9 (taxeditor): adapt to new factory method
Katja Luther
02:38 PM Revision 745e04e2 (cdmlib): adapt test to term creation with language
Katja Luther
02:30 PM Revision 45f561f8 (cdmlib): term creation with language (cont.)
- remove deprecated method and keep old factory methods
- remove unnessary second constructor
Andreas Müller
12:34 PM Revision 5a77cb09 (cdmlib): term creation with language
Katja Luther
11:25 AM Revision 01a9b431 (taxeditor): fix autoselect for enumCombo elements
Katja Luther
10:32 AM Revision e0aec7fa (taxeditor): ref #5821: fix term handling after adapting local preferences
Katja Luther
10:25 AM Revision bac35eb4 (taxeditor): create terms and vocabularies with default language representation
Katja Luther
10:23 AM bug #10017: Progressmonitoring should be more fault-tolerant
An example for such a server side thrown exception:
~~~
java : 1.8.0_321
org.springframework.remoting.RemoteAcce...
Andreas Müller
10:20 AM bug #10017: Progressmonitoring should be more fault-tolerant
Katja Luther wrote:
> Actually the progressmonitoring immediately throws exception when the server does not react, t...
Andreas Müller
09:57 AM bug #10017 (New): Progressmonitoring should be more fault-tolerant
Actually the progressmonitoring immediately throws exception when the server does not react, this should be handled w... Katja Luther
10:20 AM Revision 31b8aa9b (taxeditor): avoid calling disposed composite
Katja Luther
10:01 AM Revision 652224bd (taxeditor): code cleaning
Katja Luther
09:05 AM feature request #9939 (Resolved): Implement specimen status in TaxEditor
Removed the '+' Katja Luther
09:03 AM bug #10016 (Resolved): NPE after move of taxon
This is fixed by checking whether the value of the attribute is null. Katja Luther
08:56 AM bug #10016 (Closed): NPE after move of taxon
Hallo,
(Mexico)
ich habe mal Taxa verschoben, und zwar die Familien direkt unter die Hauptgruppe Pteridofita, das k...
Katja Luther
08:57 AM Revision acdc2ed4 (taxeditor): ref #100016: fix NPE
Katja Luther

03/31/2022

05:17 PM task #10015 (Duplicate): Cleanup EDIT server pages on BDI notes
All subpages of https://wiki.bgbm.org/bdinotes/index.php/EDITServerSetup Andreas Müller
04:32 PM bug #10014 (New): Fix windows build for CDM Server after debian11 upgrade
copied from #9972
* exec-maven-plugin temporarily switched off in pom as it throws (see src/main/installer/win32...
Andreas Müller
03:24 PM Revision 251cf9f4 (taxeditor): ref #9939: remove +
Katja Luther
03:22 PM discussion #10013 (New): Check TAXIC methods for relevance
At https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/DataPortalPrototypeInventory there functions from some other ... Andreas Müller
12:33 PM task #5528 (Closed): Remove all links to svn
This is fixed (open issue moved to #10005) Andreas Müller
12:08 PM task #9972: Upgrade edit-integration
Created follow up ticket for failing SpecimensTreeViewTest Andreas Müller
12:05 PM bug #10012 (Closed): Fix failing SpecimensTreeViewTest for dataportals after debian11 migration
copied from #9972
First check if there is any strange behavior for specimen trees (and maybe others) due to the de...
Andreas Müller
11:55 AM discussion #10011 (New): Phycobank/Vaadin documentation
Currently the user documentation is found at the Phycobank Redmine Wiki (https://dev.e-taxonomy.eu/redmine/projects/a... Andreas Müller
11:24 AM task #10010 (Closed): Install Spanish for Mexico Eflora dataportal
Also check if bi-lingual portal is easy to install.
Compare with cuba installation where all this exists.
The i...
Andreas Müller
10:47 AM task #10009 (New): Cleanup dependencies in TaxEditor
Remove all unnecessary dependencies from TaxEditor.
Includes intensive testing if everything still works as expected.
Andreas Müller
10:12 AM bug #9965 (Closed): Newly created derived unit is not shown in selection dialog
This works as expected now. Andreas Müller
10:06 AM task #9973: Upgrade edit-database
> ~~~
> Errors were encountered while processing:
> collectd-core
> E: Sub-process /usr/bin/dpkg returned an erro...
Andreas Müller
10:01 AM task #9974 (In Progress): Upgrade edit-production
Andreas Müller
09:53 AM task #10008 (New): Cleanup after server upgrades
* ~~Remove snapshots from vSphere~~
* remove restore files
* adapt restore scripts and make sure they stay on each ...
Andreas Müller
09:51 AM bug #10007 (New): fix reindex jobs on jobber
cdmserver-reindex-multiple and TRIGGER-cdmserver-reindex failed last time Andreas Müller
09:41 AM task #10006 (New): Check backups fully work after upgrades to debian 11
Check mostly the weekly and monthly backups and also check daily backup on edit-backup (/home/rsync/backup/edit-test/... Andreas Müller

03/30/2022

02:27 PM task #9954: Refactor EDIT Platform (Wiki) Documentation
All pages now follow the guideline from https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/Redmine_Best_Practice .
...
Katja Luther
02:23 PM task #3482: Dataportal administration documentation
Andreas Müller wrote in #note-3:
> Andreas Müller wrote in #note-2:
> > WGB:
> >
> > wir haben das Dokument Manu...
Katja Luther
09:41 AM bug #9965 (Resolved): Newly created derived unit is not shown in selection dialog
Andreas Müller wrote in #note-12:
> I have to reopen as this does not yet work if the derived unit has stats (not se...
Katja Luther

03/29/2022

09:23 PM task #9971: Upgrade edit-test
Open issue => moved to ticket description Andreas Müller
09:19 PM bug #10004 (New): fix edit-name-catalogue-jmeter-tests
copied from #9971
it is not running since upgrade to debian 11
Also check what the jenkins-groovy-scripts is f...
Andreas Müller
03:40 PM task #8057 (Closed): Upgrade to debian 10
This is generally fixed. For remaining open issues see related specific tickets. Andreas Müller
03:22 PM task #9974: Upgrade edit-production
Open issues => moved to ticket description Andreas Müller
03:21 PM task #9973: Upgrade edit-database
Almost done. Open issues: => moved to ticket description Andreas Müller

03/28/2022

08:55 PM task #9918 (Closed): Import Caryophyllaceae
Open unparsable name issues moved to #9014 Andreas Müller
08:39 PM task #9918: Import Caryophyllaceae
All other "Name could not be parsed: " were incorrect data.
Not yet checked: "Nom ref could not be parsed: "
Andreas Müller
07:09 PM task #9918: Import Caryophyllaceae
Names with space after hybrid sign do not match:
Scleranthus × conocephalus Rchb. in Oesterr. Bot. Z. 22: 114. 1872
Andreas Müller
08:50 PM task #9014: Unparsable name strings
Unparsable from Caryophylaceae import:
~~~
Alsine arvernensis Charb. in Bull. Soc. Bot. France 60(Sess. Extraord.): ...
Andreas Müller
03:57 PM task #8559 (Worksforme): Revision of the technical concept for the demosites
For now the demosites work and the installation scripts work faire enough. We may improve when needed. So I guess we ... Andreas Müller
03:50 PM discussion #8558 (Closed): Questionaire to get user feedback
I created a new wiki page for this list: https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/Platform_Questionaire. ... Andreas Müller
01:55 PM Revision ca2d0796 (cdmlib): ref #9965: adapt face cache to specimen status
Katja Luther
01:33 PM feature request #10003: Implement specimen status in Data portal
As it is implemented in TaxEditor already it should be implemented in dataportal soon. Andreas Müller
01:19 PM feature request #10003 (Closed): Implement specimen status in Data portal
see #2506 for information on the "status" attribute
The information is already shown in long labels but not for at...
Andreas Müller
01:00 PM bug #9965 (Feedback): Newly created derived unit is not shown in selection dialog
I have to reopen as this does not yet work if the derived unit has stats (not seen, ...). This is new and is not yet ... Andreas Müller
12:59 PM feature request #9939: Implement specimen status in TaxEditor
Andreas Müller wrote in #note-17:
> The selection is now at a better place, so we can close this ticket.
>
> Ther...
Katja Luther
12:13 PM feature request #9939 (Feedback): Implement specimen status in TaxEditor
The selection is now at a better place, so we can close this ticket.
There are only very few nice to haves that mi...
Andreas Müller
10:38 AM feature request #9939 (Resolved): Implement specimen status in TaxEditor
Andreas Müller wrote in #note-15:
> Generally this works. Only the location in the UI should be improved. Currently ...
Katja Luther
12:44 PM bug #9967 (Closed): Show "not designated" for type designations in dataportal
Works as expected Andreas Müller
09:30 AM bug #9967 (Resolved): Show "not designated" for type designations in dataportal
please review, an example you can find here: https://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataporta... Katja Luther
11:00 AM task #9972 (In Progress): Upgrade edit-integration
Katja, can you care for the SpecimensTreeViewTest issue? Andreas Müller
10:31 AM Revision d5a87edf (taxeditor): ref #9939: move status section to general section and add status to section title
Katja Luther
08:53 AM task #9971 (In Progress): Upgrade edit-test
Mostly done Andreas Müller

03/26/2022

06:15 PM task #9972: Upgrade edit-integration
Migration is now done except for the open issues. Andreas Müller
12:02 AM Revision b37127ee (cdm-dataportal): ref #9972 temporarily add Ignore to SpecimensTreeViewTest (not SpecimensTopDownViewTest)
Andreas Müller

03/25/2022

11:59 PM Revision 38403789 (cdm-dataportal): ref #9972 temporarily add Ignore to SpecimensTopDownViewTest due to build error ("squeeze" not found)
Andreas Müller
11:59 PM Revision 70bfb0dc (cdm-dataportal): cleanup
Andreas Müller
11:38 PM Revision a7cdf79b (cdm-server): ref #9972 temporarily switch of win32/exec build due to build problems after upgrading to debian 10 (cont.)
Andreas Müller
11:36 PM Revision 7ef1b9e7 (cdm-server): ref #9972 temporarily switch of win32/exec build due to build problems after upgrading to debian 10
Andreas Müller
11:52 AM task #8057 (In Progress): Upgrade to debian 10
Andreas Müller
11:21 AM task #9968: Add test/monit for testing if utis is running
Not so urgent Andreas Müller
11:00 AM task #9998: Update image links for cyprus
DR:
...
Original: https://mediahub.bo.berlin/api/File/Original/1adb62d8-0b67-4128-927b-b713d164f98e/Sisymbrium_ae...
Andreas Müller
10:14 AM Revision 74d4b7fd (taxeditor): if abbrevTitle is null, do not show in agentSelection dialogs
Katja Luther
09:47 AM bug #8591: Multiple representations problem on setting synonym as basionym
This issue pops up quite often again, so I put it to next milestone. Katja Luther
09:45 AM bug #8591: Multiple representations problem on setting synonym as basionym
And again a multiple representation exception for homotypic group:
Liebes EDIT-support-Team,
Ich habe gerade ei...
Katja Luther

03/24/2022

10:33 PM feature request #3709: [E+M][Editor] sufficient rights management for E+M workflow
This is a review ticket only and therefore we can postpone it a bit. Andreas Müller
10:31 PM feature request #6866: Improve specimen page
This is a review ticket only and therefore we can postpone it a bit. Andreas Müller
09:16 PM bug #10002 (New): Root taxa should not be abbreviated in taxon tree in dataportal
Currently the root taxa (e.g. in Flora of Mexico) are abbreviated if not used with protected titleCache and leaving o... Andreas Müller
02:55 PM feature request #2584 (Feedback): Show loading information for "Referencing Objects"
This is probably fixed in the meanwhile. Please review. Andreas Müller
02:48 PM feature request #5850 (Resolved): Further improve referencing objects label provider
This seems to be fixed more or less. Please review and move open issues to other ticket(s). Andreas Müller
02:46 PM feature request #6460 (Resolved): Refactor referencing objects in a way that supplemental data know what object they belong to
This was probably already fully implemented some time ago. Please check.
Also check related tickets.
Andreas Müller
02:34 PM task #9999 (In Progress): Improve formatting for referencing objects of descriptive data
Andreas Müller
01:37 PM task #9999 (Closed): Improve formatting for referencing objects of descriptive data
... and add ~~tests~~ for RefrencingObjectFormatter class
Some classes are not well formatter yet:
e.g.
* ~~Te...
Andreas Müller
02:29 PM Revision 2789aa85 (cdmlib): ref #9999 improve ReferencingObjectFormatter for CategoricalData, StateData and TextData and add test class for ReferencingObjectFormatter
Andreas Müller
01:41 PM task #10000 (Closed): Celebrate ticket no. 10,000
This is a ticket to celebrate our 10,000th issue!
Congratulations to all who worked on it!!!
Andreas Müller
12:49 PM task #9998: Update image links for cyprus
New transformation rule may look like (with fixed width of 300, 600, 1700):
~~~
{"scheme":null,"host":{"replace":"me...
Andreas Müller

03/23/2022

06:30 PM task #9998: Update image links for cyprus
Check for empty images before:
~~~
SELECT mrp.id, mrp.created, mrp.updated, mrp.uri, mr.id mrID, m.id, m.titleCac...
Andreas Müller
01:24 PM task #9998 (Closed): Update image links for cyprus
Also update transformation rules and adaptation to mediaMetaDataService if necessary.
And discuss with Ralf images...
Andreas Müller
03:34 PM bug #9966: Search order in advanced search not correct
This ticket is not so much related to the current milestone so I move further to next week. Maybe we have to think ab... Andreas Müller
03:32 PM feature request #9939 (Feedback): Implement specimen status in TaxEditor
Generally this works. Only the location in the UI should be improved. Currently it is too much hidden.
For Derived...
Andreas Müller
01:48 PM feature request #9939: Implement specimen status in TaxEditor
please review. Katja Luther
09:53 AM feature request #9939 (Resolved): Implement specimen status in TaxEditor
Andreas Müller
02:54 PM Revision 203e43df (cdmlib-apps): remove flora bogota destination
Andreas Müller
02:53 PM Revision cae98cb6 (cdmlib-apps): latest changes to GreeceImageActivator
Andreas Müller
02:51 PM Revision ae765538 (cdmlib-apps): ref #9932 latest changes to MexicoEflora imports
Andreas Müller
02:49 PM Revision 3cdfd4b6 (cdmlib): ref #9932 minor
Andreas Müller
02:46 PM Revision 8852c2e9 (cdmlib): ref #9932 handle status correctly in ImportDeduplicationHelper.reset()
Andreas Müller
02:45 PM Revision eb2c058f (cdmlib): ref #9932 improve BibliographicAuthorParser and -Test
Andreas Müller
02:43 PM Revision f3cc9a33 (cdmlib): cleanup
Andreas Müller
12:29 PM task #6993: Implement web service tests
This is probably more or less duplicated by for #9460 Andreas Müller
12:28 PM task #9460: REST API tests
This is probably more or less a duplicate for #6993 Andreas Müller
12:11 PM bug #8591: Multiple representations problem on setting synonym as basionym
follow up mail WB:
Hallo,
die Verschiebung ist aber erfolgt; nach Neu-Aufmachen des Zieltaxons konnte ich auch da...
Katja Luther
12:09 PM bug #8591: Multiple representations problem on setting synonym as basionym
Again a multiple representation exception:
mail WB:
Hallo,
Fl. Cuba
Ich hatte vorher bei Exostema ixoroides s...
Katja Luther
11:55 AM Revision 57ebf56d (cdm-dataportal): ref #9967: use getText()
Katja Luther
11:52 AM Revision b847789f (cdm-dataportal): ref #9967: use getText()
Katja Luther
11:21 AM task #7054 (In Progress): clean up initialization strategy using '.representations'
Please check what is still open here. Andreas Müller
11:17 AM bug #4919: improve AdvancedBeanInitializer
Please check what is still open Andreas Müller
11:13 AM task #5418: optimize lucene index if possible
Decide if this can be done in 5.33 Andreas Müller
11:09 AM bug #6195: suppress footnotes in search results page
Please check if this is still an open issue. If yes, please provide more information. Andreas Müller
11:04 AM bug #8243 (Resolved): Cdm Cache uses a lot of disk space
Please review if this is maybe fully fixed already or will be fixed after fully solving #9842.
Please pass to me a...
Andreas Müller
10:39 AM bug #4962: improve portal/classification/{taxon_uuid}/childNodesAt/{rank_uuid} web service
See also #7045 which indicates that the problem is not fully solved yet. Andreas Müller
10:27 AM bug #4962: improve portal/classification/{taxon_uuid}/childNodesAt/{rank_uuid} web service
Please review and move back to 3.12 when done.
Also check if new implementation is needed (follow up ticket)
Andreas Müller
10:38 AM bug #7045: portal/classification/{uuid}/childNodesOf/{uuid} service slow
This seems to have happened after #4962 has been resolved.
Unfortunately the bogota example is not available (arch...
Andreas Müller
10:18 AM bug #9608: UriUtils to use HTTP HEAD requests where possible
much related to #9610 so we should work on this together Andreas Müller
10:16 AM bug #9610: MediaMetadataFileReader (formerly in CdmImageInfo) loads same image file multiple times
Check if this is not yet fixed in the meanwhile. Andreas Müller
10:14 AM task #9842 (In Progress): Improve performance for loading DDS (RowWrapperDTO)
Andreas Müller
09:55 AM task #9993 (In Progress): Move markdown from code to developer wiki
Katja Luther
09:19 AM bug #9978: Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
The initial problem was that the facade cache strategy created a string with a tailing dot and the derived unit cache... Katja Luther
09:08 AM bug #9978: Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
Andreas Müller wrote in #note-4:
> Not critical anymore because we implemented workaround for critical problems in #...
Andreas Müller
09:12 AM bug #9965 (Closed): Newly created derived unit is not shown in selection dialog
Added the dataportal commits, so we can close this ticket Katja Luther
09:09 AM bug #9965 (Feedback): Newly created derived unit is not shown in selection dialog
This works as expected.
Can you still add the commits from dataportal to the ticket and then close it?
Andreas Müller
09:00 AM Revision 241afe5a (cdmlib): ref #9965 add ticket link
Andreas Müller
08:49 AM feature request #9984 (Closed): Show area in common name label in facts view
Works as expected. Andreas Müller

03/22/2022

04:11 PM bug #9967 (In Progress): Show "not designated" for type designations in dataportal
Katja Luther
04:11 PM bug #9967: Show "not designated" for type designations in dataportal
I added a first implementation, but have problems with the test. Katja Luther
04:10 PM feature request #9939: Implement specimen status in TaxEditor
Andreas Müller wrote in #note-11:
> Katja Luther wrote in #note-9:
> > To make it more flexible we should add a voc...
Katja Luther
01:31 PM feature request #9939: Implement specimen status in TaxEditor
Katja Luther wrote in #note-9:
> To make it more flexible we should add a vocabulary with the terms, otherwise we ha...
Andreas Müller
11:08 AM feature request #9939 (In Progress): Implement specimen status in TaxEditor
To make it more flexible we should add a vocabulary with the terms, otherwise we have to add the terms in a static wa... Katja Luther
04:06 PM Revision 9c0fc564 (taxeditor): ref #9939: implement occurrence status in taxEditor - use AbstractSourcedEntityElement as base class
Katja Luther
03:44 PM Revision 1ae81a78 (taxeditor): ref #9939: implement occurrence status in taxEditor - first implementation
Katja Luther
02:51 PM Revision 07c1e8db (cdm-dataportal): ref #9967: fix c&p error - continue
Katja Luther
02:42 PM Revision e38b1edd (cdmlib): ref #2506 update cdm model cache
Andreas Müller
02:31 PM Revision f21e7365 (cdm-dataportal): ref #9967: fix c&p error - continue
Katja Luther
02:20 PM Revision c14e477b (cdm-dataportal): ref #9967: fix c&p error
Katja Luther
01:58 PM Revision c5b5929b (cdm-dataportal): ref #9967: add test for not designated - continue
Katja Luther
01:57 PM Revision eef0fe2a (cdm-dataportal): ref #9967: add test for not designated - continue
Katja Luther
01:53 PM Revision 4e5bae69 (cdm-dataportal): ref #9967: add test for not designated - continue
Katja Luther
01:51 PM Revision 19eaf878 (cdm-dataportal): ref #9967: add test for not designated - continue
Katja Luther
01:49 PM Revision 0c92b3fa (cdm-dataportal): ref #9967: add test for not designated - continue
Katja Luther
01:37 PM Revision 6ec1762a (cdm-dataportal): ref #9967: add test for not designated
Katja Luther
01:35 PM Revision f7c10cb2 (cdm-dataportal): ref #9967: add test for not designated
Katja Luther
01:30 PM Revision 774733da (cdm-dataportal): ref #9967: add test for not designated
Katja Luther
12:58 PM Revision a915f3ff (cdm-dataportal): ref #9967: add not designated status, adapt to handling for name types
Katja Luther
12:51 PM Revision 79acd54a (cdm-dataportal): ref #9967: add not designated status
Katja Luther
10:44 AM bug #9965: Newly created derived unit is not shown in selection dialog
Actually a workaround is implemented with removing the trailing dot in the facade cache strategy, please review for t... Katja Luther
10:41 AM feature request #4011 (Worksforme): disallow changing publish flag for users with unsuffcient rights
This is fixed in the meanwhile. Katja Luther
10:29 AM task #2035 (In Progress): [MANUAL] Update Editor documentation to current version
Katja Luther
10:29 AM task #2035: [MANUAL] Update Editor documentation to current version
Andreas Müller wrote in #note-20:
> Generally check how far the documentation is integrated in the TaxEditor (e.g. h...
Katja Luther

03/21/2022

11:22 PM discussion #1410 (Closed): DISCUSS - CDM product names
Discussion is closed. I moved the results also to #PlatformComponents Andreas Müller
02:13 PM bug #9990: Improve TaxEditor documentation
Cleaned up outdated pages and moved them to the archive Katja Luther
02:10 PM feature request #9984 (Resolved): Show area in common name label in facts view
this is implemented now, please review. Katja Luther
02:10 PM Revision c562c82f (taxeditor): ref #9984: add areaLabel to common name label - continue
Katja Luther
02:07 PM Revision eedb760b (taxeditor): ref #9984: add areaLabel to common name label
Katja Luther
01:58 PM task #9993: Move markdown from code to developer wiki
* Moved README.md and DEVELOPER.md to wiki (https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/DataportalDevelopmen... Katja Luther
10:48 AM Revision 7a5f843d (cdm-dataportal): add mysql drupal db link
Katja Luther
09:35 AM Revision 5cbdc5c8 (cdm-dataportal): add jdk1.8 installation on linux link
Katja Luther

03/18/2022

04:04 PM feature request #6812 (Closed): Improve TaxEditor download site
Open issue moved to #9995. Generally the new update site works as expected now. Andreas Müller
04:01 PM discussion #9995 (New): Discuss structure of subsites for cybertaxonomy.org
Currently we have download on toplevel which works well but needs to be discussed. What will we do with subpages like... Andreas Müller
03:16 PM task #9994 (Closed): Tasks from documentation meeting 3/22
either implement or create tickets for open tasks.
https://wiki.bgbm.org/bdinotes/index.php/BDI_332
Andreas Müller
02:31 PM task #9993: Move markdown from code to developer wiki
Should be assigned to KL+AM Andreas Müller
02:29 PM task #9993 (Closed): Move markdown from code to developer wiki
for
* dataportal (completed)
* utis (completed)
* vaadin (#10011)
* EDIT platform manual (for now we keep it th...
Andreas Müller
02:20 PM task #9992 (New): Move content for developers from site.xml's to developer Wiki
This might become a parent ticket for subtickets or related tickets. Andreas Müller
02:17 PM task #9991 (New): Move content for users and admins from site.xml's to cybertaxonomy.org/drupal
This might become a parent ticket for subtickets for single site.xml's and/or topic related issues. Andreas Müller
02:08 PM bug #9990 (New): Improve TaxEditor documentation
We decided to write the TaxEditor developer documentation in this wiki. We have to look at every page and decide whet... Katja Luther
02:02 PM task #2091: Improve DataPortal documentation
* Moved CdmDataportalBookmarks [[CdmDataportalBookmarks]] to Archive Katja Luther
08:21 AM bug #8916 (In Progress): ConcurrentModificationException in CdmFormFactory.destroyElement()
Katja Luther
08:20 AM bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement()
Maybe this is the same problem again?
The stacktrace is a little bit different but seems to be the same:
mail W...
Katja Luther

03/17/2022

11:20 PM discussion #6613 (In Progress): Interesting examples for good documentation
"Any interested developers, including customers, can subscribe to notifications on pull requests when the documentati... Andreas Müller
01:52 PM feature request #9984 (In Progress): Show area in common name label in facts view
Katja Luther wrote in #note-3:
> We should discuss how to format this and whether it should be configurable.
>
> ...
Andreas Müller
10:38 AM feature request #9984: Show area in common name label in facts view
We should discuss how to format this and whether it should be configurable.
The first implementation looks like th...
Katja Luther
09:10 AM feature request #9984: Show area in common name label in facts view
Example: Piper auritum Kunth. , common name "uó (Mixe)" in Mexico Eflora. Andreas Müller
09:06 AM feature request #9984 (Closed): Show area in common name label in facts view
In the Mexico Eflora we have lots of common names that differ only by area (but not in name and language). To better ... Andreas Müller
01:46 PM bug #6730 (Feedback): Deleting media leads to inconsistent data
Andreas Müller wrote in #note-25:
> Sorry if I have even one more issue. Looking at the code I wonder if the service...
Andreas Müller
11:09 AM bug #6730 (Closed): Deleting media leads to inconsistent data
Now only media of descriptions and protogues can be deleted if they are used more then once. The messages are adapted... Katja Luther
01:40 PM Revision 0041651c (cdmlib): ref #9932 improve BibliographicAuthorParser
Andreas Müller
01:40 PM Revision 4b4f15bc (cdmlib): cleanup BibliographicAuthorParser
Andreas Müller
01:40 PM Revision 230416f7 (cdmlib): change FRANCEFRENCHREPUBLIC to FRANCE
Andreas Müller
11:27 AM feature request #8344 (Closed): Cdm light export: add dummy line in simple facts table
Katja Luther
11:22 AM bug #9988 (New): Fix selection for supplemental data view/referencing objects view
from #8316#note-4
But after closing the dialog (for selecting name in source of secundum source) the supplemental ...
Katja Luther
11:12 AM bug #8316 (Closed): Endless loop when editing name in source of distribution
The selection issue is another problem, so I would close this ticket and create a new ticket for setting the correct ... Katja Luther
10:14 AM bug #9983: Order sources by source type
Example: The common names of Randia obcordata in Mexico Eflora Andreas Müller
09:03 AM bug #9983 (New): Order sources by source type
Sources for description elements (and maybe others) are not yet ordered by source type. For users the "Primary XXX" s... Andreas Müller
09:39 AM bug #9987 (New): Handle areas of different vocabularies in comparator
Areas of different vocabularies can not be compared for example while creating the condensed distribution string in c... Katja Luther
09:27 AM bug #9986 (New): Log when cdmLight export is interrupted completely
Actually the error log does not show whether the export was created or not if exceptions appeared. Sometimes the expo... Katja Luther
09:23 AM bug #9985 (New): Problems in cdmLight export which are caught and not critical should be warnings only
Actually every exception during the export is logged as exception, but some are catched and should only be logged as ... Katja Luther

03/16/2022

10:12 PM feature request #5736 (Closed): Show sec reference for TaxonInteractions
Remaining issue copied to #9982 Andreas Müller
10:10 PM feature request #9982 (New): Show links for sec references
reported for taxon interaction sec references (#5736) but seems also not implemented for ordinary accepted taxon sec ... Andreas Müller
06:02 PM feature request #3533 (Closed): Prefill nomenclatural reference information if possible
works as expected Andreas Müller
12:53 PM feature request #3533: Prefill nomenclatural reference information if possible
Tested with nightly and it worked as expected. Please review. Katja Luther
09:40 AM feature request #3533 (Resolved): Prefill nomenclatural reference information if possible
Katja Luther
02:24 PM bug #9980 (New): Implement a checkbox to distinguish between export the whole subtree or only the selected node
from #6800
the subtree filter should be available now, please review. To filter on taxa, you have to click on taxon...
Katja Luther
02:22 PM feature request #6800 (Closed): Allow all filters for DwCA export in TaxEditor
The last issue having a checkbox "include children" is still an open issue, therefore I create a new ticket and close... Katja Luther
01:52 PM task #8445 (Closed): improve service description
Andreas Müller
11:27 AM task #8445: improve service description
still needs review after release Andreas Müller
11:25 AM task #8445 (Resolved): improve service description
Applied in changeset commit:utis-webapp|cb3e1fa442c8f68b4212a6bf27338296feb350fe. Andreas Müller
01:52 PM task #6384 (Closed): update BGBM logo
Andreas Müller
11:11 AM task #6384 (Resolved): update BGBM logo
still needs review after release Andreas Müller
01:51 PM Revision 34e5f1cf (utis-webapp): fix #6384 resize the new Bo logo
Andreas Müller
11:25 AM Revision cb3e1fa4 (utis-webapp): fix #8445 update utis service description
Andreas Müller
11:01 AM Revision f52a3556 (utis-webapp): ref #9899 update log4j to v 2.17.2 in UTIS
Andreas Müller
11:00 AM Revision 2b46e98c (utis-webapp): ref #6384 update BO logo and some related issues
Andreas Müller
10:37 AM task #8863: Create full documentation on multilingual setup of the Data Portal
As we have a concrete example now we should try to work on this during the next week. Andreas Müller
10:34 AM task #8863: Create full documentation on multilingual setup of the Data Portal
WGB: We can test-drive this with the setup of the Flora de México portal – I just received bi-lingual texts for the p... Andreas Müller
10:31 AM bug #9978 (In Progress): Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
Not critical anymore because we implemented workaround for critical problems in #9965.
Katja, can you document the...
Andreas Müller
10:18 AM feature request #6812 (Resolved): Improve TaxEditor download site
Andreas Müller
10:09 AM bug #9966 (In Progress): Search order in advanced search not correct
Andreas Müller
10:04 AM discussion #8558: Questionaire to get user feedback
So while cleaning up the documentation during the next weeks we should create a site with such relevant questions. Andreas Müller
10:01 AM bug #5132 (Worksforme): Remove EDITor documentation from web
The old documentation has been moved to archive and was replaced by a newer version at cybertaxonomy.org/download/man... Andreas Müller
09:59 AM task #2035: [MANUAL] Update Editor documentation to current version
... and discuss future structure where documentation should be stored and how to update Andreas Müller
09:47 AM task #2091 (In Progress): Improve DataPortal documentation
Andreas Müller
09:42 AM bug #9965 (Resolved): Newly created derived unit is not shown in selection dialog
Katja Luther

03/15/2022

10:24 AM Revision 4ab64574 (cdm-dataportal): adapt tests to changes in cacheStrategy - continue
Katja Luther
09:41 AM Revision f02cd83c (taxeditor): ref #6730: change message text for media deletion
Katja Luther
09:39 AM bug #9979 (New): Flora Greece shows large images
though medium and and small exist and seem to have correct metadata.
E.g. Achillea setacea https://portal.cybertax...
Andreas Müller
09:36 AM Revision c40b1228 (cdmlib): ref #6730: only media of descriptions and protologues can be deleted if referenced
Katja Luther
09:07 AM discussion #8558: Questionaire to get user feedback
WGB: Ich denke, es ist produktiver, die Leute, die direkt im Kontakt mit Nutzern stehen zu bitten, nach Workshops, Ku... Andreas Müller
08:28 AM Revision 6a5ec781 (cdmlib): ref #9965 remove trailing dot in DerivedUnitFacadeFieldUnitCacheStrategy
Andreas Müller

03/14/2022

09:36 PM Revision 7477eb58 (cdmlib-apps): ref #9932 handle Plantae and Tracheophyta
Andreas Müller
09:34 PM Revision d75ed864 (cdmlib-apps): ref #9932 handle countries for distribution
Andreas Müller
03:54 PM feature request #5836 (Feedback): Rename the abbrev titlecache in Reference Details View
In #7726 abbrev title was also shorten to nomencl. title, is this the wanted label? Katja Luther
03:36 PM feature request #5346: Allow 3 ways of ordering in Taxon Navigator
Please have a short look and then we can close this ticket. Katja Luther
03:36 PM feature request #5346: Allow 3 ways of ordering in Taxon Navigator
Katja Luther wrote in #note-6:
> now if the taxonnode is moved as child it is put as first child and the text is cha...
Katja Luther
03:27 PM feature request #5346: Allow 3 ways of ordering in Taxon Navigator
Andreas Müller wrote in #note-4:
> Also I wonder if we couldn't automatically refresh the navigator if the preference...
Katja Luther
03:25 PM Revision d97c3532 (taxeditor): ref #5346: after changing order in navigator update automatically
Katja Luther
03:12 PM Revision 7ac49206 (cdmlib-apps): ref #9932 parse bibliographic authors
Andreas Müller
03:12 PM Revision abcd9503 (cdmlib-apps): ref #9932 deduplicate authors
Andreas Müller
03:11 PM Revision 799f779a (cdmlib-apps): ref #9932 cleanup and minor issues
Andreas Müller
03:10 PM Revision 2dc91504 (cdmlib-apps): ref #9932 improve parsing of subgeneric names and some refactoring
Andreas Müller
03:08 PM Revision 947cfcd8 (cdmlib-apps): ref #9932 adapt article detail/pages handling for MexicoEflora import
Andreas Müller
03:03 PM Revision fe1ac35c (cdmlib): ref #9932 add BibliographicAuthorParser (minimum version to support MexicoEflora author parsing)
Andreas Müller
02:41 PM Revision 3597bcc1 (cdmlib): ref #9965: adapt to changes in derivedUnit facade
Katja Luther
01:23 PM Revision 0889ef83 (taxeditor): ref #9965: adapt to changes in FacadeImplementation
Katja Luther
01:20 PM Revision 8f2ab1dc (cdmlib): ref #9965: revert changes and remove trailing dots
Katja Luther
12:36 PM discussion #1410: DISCUSS - CDM product names
AM: Falls es zu diesem Thema noch Änderungswünsche von jemandem gibt, wäre es schön, wenn diese bis spätestens Freita... Andreas Müller
12:34 PM task #3482: Dataportal administration documentation
Andreas Müller wrote in #note-2:
> WGB:
>
> wir haben das Dokument Manual-EDIT-Platform-DataPortal.docx, das ich ...
Andreas Müller
12:10 PM task #3482: Dataportal administration documentation
WGB:
wir haben das Dokument Manual-EDIT-Platform-DataPortal.docx, das ich aber dringend mit verschiedenen in meine...
Andreas Müller
11:49 AM bug #9965 (Feedback): Newly created derived unit is not shown in selection dialog
As discussed, the implementation leads to follow up problems due to implementations in the MediaSpecimenCacheStrategy... Andreas Müller
11:46 AM Revision d5af424c (taxeditor): ref #3533: use search for author id
Katja Luther
11:45 AM feature request #3533 (Feedback): Prefill nomenclatural reference information if possible
The search works again but it does not seem to use the new search via author id. It looks like the code for the TaxEd... Andreas Müller
10:29 AM bug #9978: Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
Critical as dataportal tests fail Andreas Müller
09:40 AM bug #9978 (In Progress): Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
Discuss which titleCache is the correct one.
In dataportal test the titleCache of a derived unit changed from "Ger...
Katja Luther
10:02 AM bug #4944 (Closed): "Protected" indication for references needs to be improved
This works now. Katja Luther

03/11/2022

06:43 PM task #9960 (Closed): Remove start and end date from all tickets
Andreas Müller
06:23 PM feature request #4682: [DISCUSS] Do we need an explanation/reason field in RelationBase
Dicussion/implementation should be done in 5.31 to have it available for RL import in case we implement it. Andreas Müller
05:36 PM bug #5132: Remove EDITor documentation from web
I guess this is a duplicate. TODO find duplicate ticket.
However, should be implemented in 5.31 or 5.32.
Andreas Müller
05:18 PM feature request #786: Write Developers Guide for CDM Library
This should be updated during current milestone. Andreas Müller
05:09 PM Revision c768ddb6 (cdm-dataportal): adapt tests to changes in cacheStrategy - continue
Katja Luther
05:07 PM discussion #1410: DISCUSS - CDM product names
This is a bit urgent as we want to work on documentation during the next weeks Andreas Müller
05:07 PM discussion #1410 (In Progress): DISCUSS - CDM product names
Before updating the documentations during the next weeks we should agree on common labels and how to write (e.g. CDM ... Andreas Müller
04:55 PM Revision 1a071af2 (cdm-dataportal): adapt tests to changes in cacheStrategy - continue
Katja Luther
04:51 PM task #2756: Documentation for MultilanguageText and TranslationEditor
We need to check how far this is implemented. If there are open issues decide how to handle (what, who, when, ...). Andreas Müller
04:45 PM task #3482: Dataportal administration documentation
Katja, Walter, can you please leave a message here / investigate how far this documentation exists already and if exi... Andreas Müller
04:38 PM task #7404: Add linux and mac to editor installation documentation
Before updating we need to decide if we do/want to have this documentation at https://cybertaxonomy.org at all. Isn't... Andreas Müller
04:27 PM discussion #8558 (In Progress): Questionaire to get user feedback
Discuss if needed and what is needed in current milestone. Andreas Müller
04:21 PM Revision 6f28922f (cdm-dataportal): adapt tests to changes in cacheStrategy
Katja Luther
04:13 PM task #2035: [MANUAL] Update Editor documentation to current version
Generally check how far the documentation is integrated in the TaxEditor (e.g. help menu).
Also check if there are s...
Andreas Müller
04:06 PM task #488: Parser for editor documented
Eather finalize documentation or split ticket.
Also check if existing documentation is mentioned in TaxEditor manual...
Andreas Müller
03:49 PM task #9975: Create new UML diagramms for the CDM
There are a few tickets in the UML 5.X milestone that are related. Andreas Müller
03:48 PM task #9975 (New): Create new UML diagramms for the CDM
tools, e.g. https://en.wikipedia.org/wiki/List_of_Unified_Modeling_Language_tools Andreas Müller
03:46 PM task #2086: CDM description is outdated
The above link does not work anymore. However, we need to update CDM description where ever it can be found in the do... Andreas Müller
03:41 PM discussion #6613: Interesting examples for good documentation
Maybe helpful for the discussion on Mar 18th Andreas Müller
03:37 PM task #8863: Create full documentation on multilingual setup of the Data Portal
Please decide if this can be done in current or next milestone Andreas Müller
03:34 PM task #9954: Refactor EDIT Platform (Wiki) Documentation
Move open issues to new milestone after 5.31 release Andreas Müller
03:29 PM feature request #6812: Improve TaxEditor download site
Move back to 4.10 after review. Andreas Müller
03:25 PM task #9974 (Closed): Upgrade edit-production
Open issues:
* ~~adapt mariadb config (including timezones!)~~
* ~~/etc/ntp.conf~~
* ~~cleanup~~ (#10008)
* ~~...
Andreas Müller
03:25 PM task #9973 (Closed): Upgrade edit-database
Open issues:
* ~~adapt mariadb config. (including timezones!)~~
* ~~/etc/ntp.conf~~
* ~~cleanup~~ (#10008)
* ~~...
Andreas Müller
03:24 PM task #9972 (Closed): Upgrade edit-integration
open issues after upgrading to debian 10:
* ~~automysqlbackup~~
* ~~windows build for CDM Server does not work~~ ...
Andreas Müller
03:23 PM task #9971 (Closed): Upgrade edit-test
open issues:
* ~~backup on edit-backup for edit-test does not work yet~~ => #10006
* ~~tmux problem when first ...
Andreas Müller
02:24 PM bug #9966: Search order in advanced search not correct
The lucene search uses the OrderHint NOMENCLATURAL_SORT_ORDER, which sounds good, but at the end the id is used for o... Katja Luther
11:18 AM bug #9966 (In Progress): Search order in advanced search not correct
ERS:
Das ist die nicht-alphabetische Ausgabe der Search results in der advanced search (also bei Setzen eines Geo-...
Andreas Müller
12:29 PM task #9969 (New): Get utis jmeter test running or switch off test
Andreas Müller
12:27 PM task #9968 (New): Add test/monit for testing if utis is running
Same for mapproxy.
https://cybertaxonomy.org/eu-bon/utis/1.3/
https://geo.cybertaxonomy.org/mapproxy/
Note: ...
Andreas Müller
11:33 AM feature request #9939: Implement specimen status in TaxEditor
Adapt a portal test with this status. Katja Luther
11:25 AM bug #9967 (Closed): Show "not designated" for type designations in dataportal
NaK:
ich sehe gerade, dass die Typus-Angabe „not designated“ nicht im Portal ausgegeben wird

https://caryophyl...
Andreas Müller

03/10/2022

02:40 PM feature request #9114: Handle malformed URIs in user type
This was fixed in 5.30 already Andreas Müller
02:36 PM feature request #9114 (Closed): Handle malformed URIs in user type
Added a testcase for more than one fragment, the rest was already reviewed, so we can close this ticket. Katja Luther
02:35 PM feature request #9114 (Resolved): Handle malformed URIs in user type
Applied in changeset commit:cdmlib|09da5a1bd580baae6490435bc52dddd6d2aab353. Katja Luther
02:35 PM Revision 09da5a1b (cdmlib): fix #9114: add testcase with more than one fragment
Katja Luther
02:23 PM Revision 6b6f20e9 (cdmlib): titleCache should not end with a point
Katja Luther
02:00 PM Revision 138275e3 (cdmlib): adapt tests to existing authors
Katja Luther
01:38 PM feature request #3533: Prefill nomenclatural reference information if possible
Changed from matching of nomenclatural titleCache to matching of id of the author. Now only references of exact the s... Katja Luther
01:28 PM Revision 07658be8 (cdmlib): ref #3533: add test for reference search with author id
Katja Luther
01:10 PM Revision bddca639 (cdmlib): ref #3533: add method to search for reference from author with authorID
Katja Luther
01:05 PM bug #9965 (Resolved): Newly created derived unit is not shown in selection dialog
This should be fixed, the problem comes from the change of the cache strategy of the derived unit to DerivedUnitFacad... Katja Luther
01:01 PM bug #9965 (Closed): Newly created derived unit is not shown in selection dialog
mail Nadja Korotkova:
ich habe einen kleinen Bug gefunden
Wenn man ein neues Specimen angelegt hat, kann man es...
Katja Luther
01:03 PM Revision 4e59ccae (cdmlib): ref #9965: do not change cacheStrategy of derived unit
Katja Luther

03/09/2022

04:05 PM Revision d984e66b (cdmlib): ref #3533: fix search for reference with author
Katja Luther
01:59 PM bug #9959 (Closed): Abbrev title instead of title for authors in bibliographic references
ERS: Funktioniert anscheinend wie erwartet Andreas Müller
 

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