Activity

From 12/27/2021 to 01/25/2022

01/25/2022

04:17 PM task #9928 (Closed): cdm_dataportal/search/agent/ filter for „publish to IPNI“ or „publish“ and show all identifieres: I created a non public page in the phycobank site which lists both search modes for agents: https://www.phycobank.org... Andreas Kohlbecker
03:44 PM task #9928: cdm_dataportal/search/agent/ filter for „publish to IPNI“ or „publish“ and show all identifieres: for a result page with a Person having in IPNI identifierd see :
* http://edit.test/d7/phycobank/cdm_dataportal/sear... Andreas Kohlbecker
11:40 AM task #9928 (Closed): cdm_dataportal/search/agent/ filter for „publish to IPNI“ or „publish“ and show all identifieres: follow up to #9034
https://www.phycobank.org/cdm_dataportal/search/agent/?markerType=c7cc1bcc-7e72-4ed5-8dba-e20... Andreas Kohlbecker
03:40 PM bug #9929 (Closed): cdm_dataportal/search/agent/ filter by cdmType=Person does not work: Andreas Kohlbecker
03:40 PM bug #9929 (Resolved): cdm_dataportal/search/agent/ filter by cdmType=Person does not work: Applied in changeset commit:cdm-dataportal|f46b35f3b91b34dfa554f7bafd0fedf9f48d21f7. Andreas Kohlbecker
03:37 PM bug #9929 (Closed): cdm_dataportal/search/agent/ filter by cdmType=Person does not work: The result list also contains Teams Andreas Kohlbecker
10:14 AM bug #9843: When adding new descriptions it should not be necessary to load the complete matrix: Andreas Müller wrote in #note-9:
> Can you leave a short message what has been done and how/where it can be tested.
... Katja Luther

01/24/2022

04:56 PM bug #9843 (Feedback): When adding new descriptions it should not be necessary to load the complete matrix: Can you leave a short message what has been done and how/where it can be tested.
What is the expected new behaviour ... Andreas Müller
04:53 PM bug #9907 (Closed): NPE when trying to create polytomous key: This seems to be fixed now. Andreas Müller
04:24 PM feature request #9927 (New): option to use fixed bbox also for occurrence maps: The **Bounding box** setting in `/admin/config/cdm_dataportal/settings/geo` should also be applicable to the occurren... Andreas Kohlbecker
04:03 PM feature request #9894 (Closed): Make primary collector editable for field unit: Works as expected now. Andreas Müller
02:38 PM feature request #9894 (Resolved): Make primary collector editable for field unit: Andreas Müller wrote in #note-8:
> ... no, not yet ready. After entering a team and a primary collector for a field ... Katja Luther
03:59 PM feature request #9114: Handle malformed URIs in user type: Implemented encoding of fragment part, query part was already implemented. @AK could you have a look and give feedbac... Katja Luther
03:50 PM bug #9900 (Closed): Null values in agent search dialog: Andreas Müller
02:35 PM bug #9900 (Resolved): Null values in agent search dialog: This should be fixed now. Also fixed for new teams. Please review. Katja Luther
03:46 PM bug #9916 (Closed): Tooltip for data cells in bulkeditor: Works as expected now Andreas Müller
02:54 PM bug #9916 (Resolved): Tooltip for data cells in bulkeditor: This should be fixed, please review. Katja Luther
09:26 AM bug #9882 (Closed): Null argument when deleting description in bulkeditor: Andreas Müller wrote in #note-5:
> From the ticket description I am not sure if I understand what the original probl... Katja Luther

01/21/2022

11:42 PM feature request #9862: centralized password policy enforcement validator: Yes I agree, it is probably better although for possible future developments to have a more sophisticated library at ... Andreas Müller
04:51 PM feature request #9862 (Resolved): centralized password policy enforcement validator: Andreas Müller wrote in #note-8:
> One more issue. I wonder if we really need to integrate a full new library for thi... Andreas Kohlbecker
03:47 PM feature request #9862: centralized password policy enforcement validator: One more issue. I wonder if we really need to integrate a full new library for this function. There seem to be simple... Andreas Müller
03:36 PM feature request #9862 (Feedback): centralized password policy enforcement validator: Generally it works. Some minor issues:
* The validator class should always named like {ValidationAnnotationName}Va... Andreas Müller
04:39 PM feature request #9877 (Closed): Account Registration UI: Andreas Kohlbecker
04:19 PM feature request #9877: Account Registration UI: Yes, resolved 100%. Ticket can be closed. Wolf-Henning Kusber
03:15 PM feature request #9877: Account Registration UI: Above problem has been handled in #9924
can we close this ticket now? Andreas Kohlbecker
04:38 PM bug #9926 (Closed): Password Recovery Dialog : Unknown error when user name given but email unknown: Andreas Kohlbecker
04:36 PM bug #9926: Password Recovery Dialog : Unknown error when user name given but email unknown: Okay, this is changed to "An email with a password reset link has been sent to you." Can be closed. Wolf-Henning Kusber
03:09 PM bug #9926: Password Recovery Dialog : Unknown error when user name given but email unknown: please review Andreas Kohlbecker
03:08 PM bug #9926 (Resolved): Password Recovery Dialog : Unknown error when user name given but email unknown: Applied in changeset commit:cdm-vaadin|768362910a6dbe82df743274d6c7ebb5a01896b5. Andreas Kohlbecker
02:35 PM bug #9926 (Closed): Password Recovery Dialog : Unknown error when user name given but email unknown: ![](clipboard-202201211435-edi1o.png)
Andreas Kohlbecker
03:02 PM feature request #9924 (Closed): accountCreation view with field validation: Andreas Kohlbecker
02:18 PM feature request #9924: accountCreation view with field validation: Mouse over is helpful and the wording is clear. Invalid mandatory entries are clearly indicated. The ticket can be cl... Wolf-Henning Kusber
12:14 PM feature request #9924 (Resolved): accountCreation view with field validation: please review Andreas Kohlbecker
11:46 AM feature request #9924 (Closed): accountCreation view with field validation: The following fields need to be required:
* User name
* Password - already OK
* Password repeat - already OK
... Andreas Kohlbecker
02:10 PM bug #9882 (Feedback): Null argument when deleting description in bulkeditor: From the ticket description I am not sure if I understand what the original problem was. Was it in taxon bulk editor ... Andreas Müller
01:55 PM bug #9925 (Closed): Spring environment variable `$supportEmailAddress` not expandend in Emails: Solved by
1. harmonization of variable keys and
2. adapting the setting in the servers (edit-int, edit-prod) Andreas Kohlbecker
01:53 PM bug #9925 (Resolved): Spring environment variable `$supportEmailAddress` not expandend in Emails: Applied in changeset commit:cdmlib|e07545e6b8af70b6156c958092a1e91496cd34eb. Andreas Kohlbecker
01:11 PM bug #9925 (Closed): Spring environment variable `$supportEmailAddress` not expandend in Emails: Variable `$supportEmailAddress` not expandend in Email, even if set as SystemParameter:
~~~
JAVA_OPTIONS="$JAVA_O... Andreas Kohlbecker
12:12 PM bug #9900: Null values in agent search dialog: Katja Luther wrote in #note-5:
> Andreas Müller wrote in #note-3:
> > ... upps I just realize that, when editing a ... Andreas Müller
10:40 AM bug #9900: Null values in agent search dialog: Andreas Müller wrote in #note-3:
> ... upps I just realize that, when editing a team and open the dialogue to add a ... Katja Luther
08:18 AM bug #9900: Null values in agent search dialog: Andreas Müller wrote in #note-2:
> The null is not there anymore so the ticket seems to be fixed.
>
> I only wond... Katja Luther
10:58 AM feature request #9859: Password Recovery UI: Password recovery is fine if the saved Password is used. If another saved password is used it also functions, if it i... Wolf-Henning Kusber
10:14 AM bug #9921 (Closed): manage/Action.jsp broken: Problem is fully solved. Andreas Kohlbecker
12:09 AM bug #8343: potential timezone problem in application stack: Andreas Kohlbecker wrote in #note-8:
> Andreas Müller wrote in #note-7:
> > Is this solved in the meanwhile? https://... Andreas Müller

01/20/2022

11:56 PM bug #9921 (Resolved): manage/Action.jsp broken: Please review. Andreas Müller
11:35 PM feature request #694: FeatureTreeService and DescriptionElement implemented: please review Andreas Müller
11:33 PM bug #9900: Null values in agent search dialog: ... upps I just realize that, when editing a team and open the dialogue to add a new team member the problem still ex... Andreas Müller
11:11 PM bug #9900 (Feedback): Null values in agent search dialog: The null is not there anymore so the ticket seems to be fixed.
I only wonder why there was so much code attached. ... Andreas Müller
11:30 PM feature request #9894 (Feedback): Make primary collector editable for field unit: ... no, not yet ready. After entering a team and a primary collector for a field unit and then setting the focus to a... Andreas Müller
11:25 PM feature request #9894 (Closed): Make primary collector editable for field unit: Seems to work as expected. Andreas Müller
11:13 PM bug #9895 (Closed): Multiple representations of the same entity after move of synonym: Seems to work as expected. Andreas Müller
10:53 PM bug #9914 (Closed): Series part in nomenclatural sources should have a space prefix if it starts with a letter: Andreas Müller
10:46 PM bug #9916 (Feedback): Tooltip for data cells in bulkeditor: I get
~~~
last remote request response header time : Thu, 20 Jan 2022 08:31:49 GMT
client error time : 2022-01-... Andreas Müller
10:31 PM bug #9855: Specimen images sometimes show duplicates: Andreas Kohlbecker wrote in #note-7:
> For de-duplicating the Media in `TaxonService.listMedia()` I suggest to use a... Andreas Müller
03:43 PM bug #9855: Specimen images sometimes show duplicates: For de-duplicating the Media in `TaxonService.listMedia()` I suggest to use a more modern java code style:
~~~
ta... Andreas Kohlbecker
07:25 PM feature request #9877: Account Registration UI: 20Jan 2022: invalid user name "wolf kusber" results in an error in Vaadin, the user is not generated, but the mail th... Wolf-Henning Kusber
07:20 PM feature request #9859: Password Recovery UI: Password recovery is fine if the saved Password is used. Wolf-Henning Kusber
04:03 PM bug #9854 (Closed): In ABCD import type designations should not be added to all names of a homotypic group: This is fixed. Katja Luther
04:03 PM bug #6121 (Worksforme): NPE during portal web service requests that go through BaseController.doGetMethod(): it is 5 years ago that we have created this ticket. I hardly remember potential conditions that are not documented here. Andreas Kohlbecker
03:59 PM bug #8343: potential timezone problem in application stack: Andreas Müller wrote in #note-7:
> Is this solved in the meanwhile? https://www.phycobank.org/cdm_dataportal/registr... Andreas Kohlbecker
03:53 PM feature request #9896 (Closed): Add annotations of the complete derivation branch to DerivedUnitDTO and FieldUnitDTO as AnnotationDTO: Andreas Kohlbecker
03:52 PM bug #9878 (Closed): show MediaSpecimen media source citations in registration items: Andreas Kohlbecker
03:25 PM bug #9878: show MediaSpecimen media source citations in registration items: In Vaadin the issue is resolved. The ticket can be closed. Wolf-Henning Kusber
03:51 PM feature request #9884 (Closed): Vaadin UI-disabled reporting: As the remaining inconsistencies will be solved with #9860, this ticket here can be closed. Andreas Kohlbecker
03:32 PM bug #9913 (Closed): TypeDesignationEditor: Sub collections without code show blank in the collection select: the new issue is handled in #9920 and this ticket here can be closed Andreas Kohlbecker
03:29 PM bug #9920 (Closed): TypeDesignations appear mixed up in Registration Workingset Editor: Andreas Kohlbecker
03:14 PM bug #9920: TypeDesignations appear mixed up in Registration Workingset Editor: Both issues (mix, plural/singular) are fixed. The ticket can be closed. Wolf-Henning Kusber
03:28 PM feature request #804 (Closed): Integrationtest for TextData.getPreferredLanguageString(): test implemented Andreas Kohlbecker
03:28 PM feature request #804 (Resolved): Integrationtest for TextData.getPreferredLanguageString(): Applied in changeset commit:cdmlib|0af14c54443f3db34a80702506a6a18384b286fd. Andreas Kohlbecker
10:18 AM task #9922 (New): Do not save Image Server thumbnails indicating an not-existing image: Filter out "not exists" thumbnail image from BGBM image server during image save in cdmlib Andreas Müller

01/18/2022

11:09 PM task #9918: Import Caryophyllaceae: Unparsed names:
Silene nocteolens Webb & Berthel., Hist. Nat. Iles Canaries 3(2,1): 141. 1840 => OK Andreas Müller
04:51 PM bug #9921 (Closed): manage/Action.jsp broken: It seems as if something got broken due to the recently made code cleaning.
Clicking on stop in the management UI ... Andreas Kohlbecker
04:41 PM feature request #9134 (Closed): Rule based creation of additional media representations "on the fly": I think this can be closed now, the fix made comitted with commit:41ed639d also solves the problem that recently occu... Andreas Kohlbecker
12:39 PM bug #9920: TypeDesignations appear mixed up in Registration Workingset Editor: Wolf-Henning Kusber wrote in #note-6:
> TypeDesignations appear mixed up in Registration Workingset Editor is fixed.... Andreas Kohlbecker
10:49 AM bug #9920: TypeDesignations appear mixed up in Registration Workingset Editor: TypeDesignations appear mixed up in Registration Workingset Editor is fixed.
But the wording ...type vs. ...types ... Wolf-Henning Kusber

01/17/2022

06:39 PM bug #9920: TypeDesignations appear mixed up in Registration Workingset Editor: fixed, please review once the test server is updated (tomorrow) Andreas Kohlbecker
06:38 PM bug #9920 (Resolved): TypeDesignations appear mixed up in Registration Workingset Editor: Applied in changeset commit:cdm-vaadin|a52dca4aceec75b445717c5d42deb045c8694abe. Andreas Kohlbecker
06:05 PM bug #9920 (Closed): TypeDesignations appear mixed up in Registration Workingset Editor: Example Registration http://phycobank.org/102736 in test system:
* Collections:
* "Coll. Reichardt" sub-coll... Andreas Kohlbecker
04:43 PM bug #9917: etopo1 broken due to server migration at noaa.gov: ... otherwise there might no longer be a need to support this map layer since we can use OpenTopoMap.
Andreas Kohlbecker

01/15/2022

07:43 PM task #9919 (Duplicate): Upgrade maven-compiler-plugin to 3.x in cdmlib: Andreas Müller
02:56 PM task #9919 (Duplicate): Upgrade maven-compiler-plugin to 3.x in cdmlib: Currently model test fail when doing so (maybe because aspectj is not handled correctly) Andreas Müller
01:41 AM task #3408: replace spring-modules-cache by up to date implementation: I just see that this dependency is also used in cdm-vaadin. Don't know if it is needed there at all. But we should al... Andreas Müller
12:59 AM task #9918 (In Progress): Import Caryophyllaceae: Andreas Müller
12:55 AM task #9918 (Closed): Import Caryophyllaceae: Andreas Müller

01/14/2022

06:28 PM bug #9917 (In Progress): etopo1 broken due to server migration at noaa.gov: Andreas Müller
05:29 PM bug #9917: etopo1 broken due to server migration at noaa.gov: see mapproxy git repo branch `nooa-etopo1-fix` for a first attempt to fix this in mapproxy Andreas Kohlbecker
05:17 PM bug #9917 (Closed): etopo1 broken due to server migration at noaa.gov: The map service at noaa has been moved to a new server and map are thus available from new service endpoints:
Docu... Andreas Kohlbecker
04:22 PM bug #9916 (Resolved): Tooltip for data cells in bulkeditor: Please review. Katja Luther
04:21 PM bug #9916 (Closed): Tooltip for data cells in bulkeditor: mail AM:
ich habe kürzlich beim Datacleaning festgestellt, dass bei den Bulk Editor NAT Tables beim Mouse Over das... Katja Luther
03:43 PM feature request #9915 (Closed): Make "accessed" also available for references of type "database": "Accessed" already exists for websites. Websites and databases are usually dynamic references and therefore maybe ci... Andreas Müller
10:09 AM bug #9236 (Closed): stopping an instance breaks the centralized logging: This works as expected. Katja Luther

01/13/2022

04:54 PM bug #9236: stopping an instance breaks the centralized logging: solved by excluding the LogbackServletContainerInitializer from the configuration.
Please review Andreas Kohlbecker
04:53 PM bug #9236 (Resolved): stopping an instance breaks the centralized logging: Applied in changeset commit:cdm-server|7ba74c603e769569dd1b0052949cd321c86722da. Andreas Kohlbecker
12:05 PM bug #9236 (In Progress): stopping an instance breaks the centralized logging: Andreas Müller
11:29 AM bug #9236: stopping an instance breaks the centralized logging: The problem is caused by the `LoggerContext` being shutdown by the `LogbackServletContextListener` in `LogbackServlet... Andreas Kohlbecker

01/05/2022

03:39 PM bug #9911 (New): Expand area search to adjacent countries: Suggestion from David Merrick:
... Also you could have an "expand to adjacent countries" if the page knows for eac... Andreas Müller
03:15 PM bug #9802: Label for min=max does not unify values in Matrix QuantitativeData label provider: Katja Luther wrote:
> > Also the label provider for the factual data view handles the issue correct. Is there a reas... Andreas Müller
02:39 PM bug #9802: Label for min=max does not unify values in Matrix QuantitativeData label provider: > Also the label provider for the factual data view handles the issue correct. Is there a reason why we do not use th... Katja Luther
01:04 PM feature request #9894 (Resolved): Make primary collector editable for field unit: This is implemented with a selection dialog, maybe it would be easier to use with a drop down, filled with the team m... Katja Luther
12:27 PM feature request #9910 (New): Add configurable flag for common name search in dataportal simple search: Some portals may want to have a common name search flag included in simple search (similar to include misaplication f... Andreas Müller
10:16 AM task #9909 (New): Think about using the checker framework to avoid e.g. NPEs: https://checkerframework.org/manual/ Andreas Müller

01/04/2022

03:17 PM bug #9882 (Resolved): Null argument when deleting description in bulkeditor: Katja Luther wrote:
> The original problem is solved, but there is another issue. The deletion of the description el... Katja Luther
02:47 PM bug #9895 (Resolved): Multiple representations of the same entity after move of synonym: This is fixed,please review. Katja Luther
01:49 PM bug #9907 (Resolved): NPE when trying to create polytomous key: This should be fixed. Katja Luther
01:44 PM bug #9907: NPE when trying to create polytomous key: This exception is caused by the missing treeIndex in nodeDto. Katja Luther
01:44 PM bug #9907 (Closed): NPE when trying to create polytomous key: mail Murat Erdem Guzel:
We tried to "generate polytomous key" for our group. However, we got the following error m... Katja Luther
01:48 PM bug #9900 (Resolved): Null values in agent search dialog: This should be fixed. Katja Luther
01:47 PM feature request #9908 (Closed): Add timeperiod to credits: for further explanation see #9906#note-1 Andreas Müller
09:52 AM feature request #9906: Implement credits in dataportal: ERS:
eine Frage zur Portal-Gestaltung: im Cichorieae-Portal gibt es auf einzelnen Taxon-Seiten die Kategorie “Cred... Andreas Müller
09:49 AM feature request #9906 (New): Implement credits in dataportal: Credits are editable in TaxEditor but currently not yet visible in the CDM dataportals. However, in future they will ... Andreas Müller

01/03/2022

10:08 PM bug #9905 (In Progress): Parser is slow for names with authorteams: Andreas Müller
09:58 PM bug #9905 (Closed): Parser is slow for names with authorteams: Probably the reason is that potential deduplication candidates are not found correctly and the list of candidates is ... Andreas Müller

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