Activity
From 12/03/2021 to 01/01/2022
12/23/2021
- 10:52 AM bug #9904 (Closed): NullPointerException (NPE) in ListView with filter name="Stephano"
- fixed!
Now the validation errors are visible gain:
 - 10:51 AM bug #9904 (Resolved): NullPointerException (NPE) in ListView with filter name="Stephano"
- Applied in changeset commit:cdmlib|00e4c79fbb7ae6fa6a5c911072ab1b6e0d8ccd7a.
- 10:46 AM bug #9904: NullPointerException (NPE) in ListView with filter name="Stephano"
- and is caused by a validation error ("Inconsistent type designations") in which case the `summaryText` in `Registrat...
- 10:39 AM bug #9904: NullPointerException (NPE) in ListView with filter name="Stephano"
- this happens for the registration http://phycobank.org/4680
- 10:34 AM bug #9904 (Closed): NullPointerException (NPE) in ListView with filter name="Stephano"
~~~
[phycobank] 10:31:11,561 DEBUG [qtp1161667116-25][eu.et.cd.va.pe.AccessRestrictedViewControlBean] - allowing...- 10:51 AM Revision 00e4c79f (cdmlib): fix #9904 avoiding null value for RegistrationDT0.summaryTaggedText
- 10:04 AM Revision 54d7e850 (cdm-vaadin): proper logging instead of system.out
- 10:03 AM Revision d6a88817 (cdm-vaadin): cleaning up obsolete class
12/22/2021
- 12:08 AM Revision 8def85fa (taxeditor): update spring version in MANIFEST.MF and build.properties
- 12:01 AM Revision 2b7f1be4 (taxeditor): ref #9359 updating jackson and fop to latest version in taxeditor
12/21/2021
- 11:56 PM Revision 8f7ca08d (taxeditor): ref #9359 updating junit and joda-time to latest version in taxeditor (cont.)
- 11:50 PM Revision c31fcd9c (taxeditor): ref #9359 updating commons-lang3 to latest version in taxeditor (cont.)
- 11:23 PM Revision 594bfa10 (taxeditor): remove dozer from gitattributes
- 11:23 PM Revision 9884d3db (taxeditor): ref #9359 updating junit and joda-time to latest version in taxeditor
- 11:22 PM Revision fd27a29d (cdmlib): ref #9359 updating junit and joda-time to latest version in cdmlib
- 11:08 PM Revision 92605e20 (taxeditor): ref #9359 updating commons-lang3 to latest version in taxeditor
- 11:07 PM Revision e2a36780 (cdmlib): ref #9359 updating commons-lang3 to latest version in cdmlib
- 11:03 PM Revision 6b7f04a6 (taxeditor): ref #9359 updating jackson and fop to latest version in taxeditor
- 11:01 PM Revision 2425ff4f (cdmlib): ref #9359 updating jackson, dozer, fop and guava to latest version in cdmlib
- 10:30 PM Revision 5ba4170a (taxeditor): cleanup pom developer data and ci URL to https
- 10:24 PM Revision 886a4b2e (cdmlib): ref #9359 update spring security OAuth2 to 2.5.1 in cdmlib
- 10:23 PM Revision a623e437 (cdmlib): update organizationURL
- 09:56 PM Revision c6e48a0a (taxeditor): ref #9359 update spring to 4.3.30 in taxeditor and use mvn properties for spring version
- 09:50 PM Revision 46ddc021 (cdmlib): ref #9359 update spring to 4.3.30 in cdmlib
- 09:37 PM Revision 3267b6d8 (taxeditor): cleanup
- 06:36 PM feature request #9903 (Closed): disable common name search in defaults
- 06:28 PM feature request #9903 (Resolved): disable common name search in defaults
- Applied in changeset commit:cdm-dataportal|868cf790da78a99a626c7544a5ef512cdd28e002.
- 06:26 PM feature request #9903 (Closed): disable common name search in defaults
- Common Name Suche sollte m.E. auf jeden Fall ausgeschaltet sein per Default.
- 06:28 PM Revision 868cf790 (cdm-dataportal): fix #9903 common name search disabled by default
- 06:13 PM Revision 058c75f7 (taxeditor): ref #9359 httpcomponents to 4.5.13 and spring-security to 4.2.20 in taxeditor
- 06:12 PM Revision 58cfb4c1 (cdmlib): cleanup
- 06:11 PM Revision 5bda5597 (cdmlib): ref #9359 httpcomponents to 4.5.13 and spring-security to 4.2.20 in cdmlib
- 05:57 PM Revision 9c73e70f (cdmlib): ref #9359 update commons-compress to 1.21
- 05:54 PM Revision 624722d8 (cdm-server): cleanup
- 02:03 PM feature request #9902 (New): Add possibility to clear area filter in advanced search
- Request from Davie Merrick: "The place filter works well. Can I suggest there be an option to clear the filter. "
- 09:00 AM Revision eee93087 (taxeditor): ref #9900: fix consistent use of abbrev title for authors of nomenclatural reference - continue
12/20/2021
12/19/2021
- 01:02 AM Revision 847b908a (cdm-server): remove some more PermSize and MaxPermSize
- 12:54 AM Revision b396b65c (cdm-server): Replace deprecated GnuParser by DefaultParser
- 12:53 AM Revision d8a13c97 (cdm-server): cleanup
12/17/2021
- 11:54 PM Revision 3baaf1b2 (cdmlib): ref #9607 remove redundant method in IMediaInfoFactory
- 11:54 PM Revision f37ad6bb (cdmlib): cleanup
- 02:59 PM bug #9901 (In Progress): Remove unique key Media_RightsInfo.rights_id
- 02:59 PM bug #9901 (Closed): Remove unique key Media_RightsInfo.rights_id
- Some DBs still have this key but as rights are reusable now this is not correct.
~~~
ALTER TABLE `Media_RightsInf... - 01:36 PM Revision d82999cd (taxeditor): ref #9900: fix consistent use of abbrev title for authors of nomenclatural reference
- 11:42 AM bug #9900 (Closed): Null values in agent search dialog
- mail AM:
schon seit längerem ist mir aufgefallen, dass bei der Anzeige von Personen im Dialog etwas nicht stimmt. ...
12/16/2021
- 04:28 PM Revision a9ee539b (cdm-dataportal): Merge tag '5.28.1' into develop
- tagging 5.28.1
- 04:28 PM Revision 5726a297 (cdm-dataportal): Merge branch 'hotfix/5.28.1'
- 04:28 PM Revision 4f63f56d (cdm-dataportal): diabling WoRMS due to unresolved potential copyright issues
- 04:26 PM Revision 936c6844 (cdm-dataportal): diabling WoRMS due to unresolved potential copyright issues
- 01:52 PM Revision 22845878 (cdmlib): fix exception in delete of specimen
- 01:17 PM Revision 95fa5b49 (utis-core): updating log4j configuration
- 01:05 PM Revision a2f52132 (utis-core): replacing all system.err/out to proper logging
- 11:57 AM Revision a9d074d6 (utis-webapp): ref #9899 updating log4j to latest version >=2.16.0
- 11:56 AM Revision 02d98cb4 (utis-core): ref #9899 updating log4j to latest version >=2.16.0
- 11:55 AM Revision bc1fb5b4 (utis-core): gitignore
12/15/2021
- 11:10 PM Revision c5d04eba (cdmlib-apps): cleanup
- 11:09 PM Revision 32e6bfbb (cdmlib-apps): ref #9607 adapt app-import to new media metadata reading
- 02:31 PM Revision 39026d65 (cdmlib): remove PermSize from cdmlib-remote-webapp launchers
- 02:25 PM Revision 4f5f1a8d (cdmlib): add ExcelSpecimenImportTemplate.xlsx
12/14/2021
- 03:45 PM Revision 81745451 (cdm-dataportal): README: on apache module installation
- 03:26 PM Revision e3a8d2d7 (cdm-dataportal): README: on /etc/hosts
- 02:53 PM Revision 2d49e5fc (cdm-dataportal): fixing path in README
- 02:25 PM Revision 20ea70f7 (utis-webapp): ref #9898 upgrading spring to 4.3.30.RELEASE
- 02:12 PM Revision 642ac8dd (cdm-dataportal): updating installation doc
- 01:52 PM Revision b17d9c81 (utis-webapp): ignoring .factorypath
- 11:36 AM Revision 7cc62e59 (taxeditor): ref #9851: add equinox/p2 to logger configuration
12/13/2021
- 03:49 PM Revision 778f90cb (utis-core): ref #9898 updating java code level and maven plugins
- 03:48 PM Revision ecf8f7fc (taxeditor): minor
- 03:48 PM Revision dc877faa (utis-webapp): ref #9898 updating javva code level and maven plugins
- 03:48 PM task #9898: Update utis projects to jdk 11
- as first step we will need to update to jdk 1.8
- 02:02 PM task #9898 (New): Update utis projects to jdk 11
- 03:03 PM Revision 041b2db9 (utis-core): ref #9899 updating log4j to latest version >=2.15.0
- 03:02 PM Revision 26588e67 (utis-webapp): ref #9899 updating log4j to latest version >=2.15.0
- 11:39 AM Revision 793bb6ac (cdm-server): Revert "remove PermSize and MaxPermSize from launchers and configs"
- This reverts commit 47d992391158c22481b5c7e178b8454e95abc4c8.
- 11:30 AM Revision 47d99239 (cdm-server): remove PermSize and MaxPermSize from launchers and configs
12/10/2021
- 04:52 PM Revision be14d958 (cdm-dataportal): ref #9897 support for AnnotationDTO class
- 04:50 PM Revision 53ecdbc6 (cdmlib): ref #9896 adding missing AnnotationDTO class
- 04:50 PM Revision e3820923 (cdmlib): adding again full ReferenceDTO to SourceDTO as the data portal needs more data
- 03:22 PM feature request #9896 (Resolved): Add annotations of the complete derivation branch to DerivedUnitDTO and FieldUnitDTO as AnnotationDTO
- Applied in changeset commit:cdmlib|c25679bb50510d0b5ff98b617e9a18ba4fec879b.
- 11:33 AM feature request #9896 (Closed): Add annotations of the complete derivation branch to DerivedUnitDTO and FieldUnitDTO as AnnotationDTO
- the set of AnnotationDTOs should be added at SpecimenOrObservationBaseDTO
suggested structure of AnnotationDTOs:
... - 03:22 PM Revision c25679bb (cdmlib): fix #9896 DerivedUnitDTO with complete set of annotationDTOs
- 11:39 AM feature request #9897 (New): adapt dataportal methods for transparent usage of Anntoation and AnnotationDTO
- AnnotationDTO will be implemented in #9896
Methods to adapt in the data portal:
* cdm_ws_fetch_annotations() - ... - 10:13 AM bug #9895 (Closed): Multiple representations of the same entity after move of synonym
- This exception appears when moving a synonym to another taxon which is already open and add this synonym to another h...
12/09/2021
- 11:53 PM bug #2448 (Worksforme): Missing updated by/when (e.g. in PalmWeb)
- This is very likely being fixed by #9665 therefore I close ticket. Reopen if something similar is observed in future.
- 10:02 PM bug #9649 (Closed): Specimens sometimes have empty titleCache instead of class<UUID>
- This issue seems to be fixed with #9665
- 12:17 AM bug #9649 (In Progress): Specimens sometimes have empty titleCache instead of class<UUID>
- There are still records in fdac, which is not supported anymore and did not run cache updates.
~~~
SELECT *
F... - 05:28 PM Revision dc49e27e (cdm-dataportal): adapting test to improved DerivedUnitDTO.summaryLabel
- 03:06 PM Revision e198e1a9 (cdm-dataportal): php doc
- 03:04 PM Revision 9ba6f6a5 (cdmlib): using the derivedUnit.titleCache as DerivedUnitDTO.summaryLabel
- 01:33 PM bug #9851: Problems during search for updates when network delay is too big
- Found a possibility to increase the timeout for equinox:
https://wiki.eclipse.org/Equinox/p2/TransportDebugging
... - 11:35 AM Revision 95d95003 (taxeditor): ref #9851: log only update handler - minor
- 11:09 AM Revision 0c4e1698 (taxeditor): ref #9851: log only update handler - continue
- 11:07 AM Revision 934cad1f (taxeditor): ref #9851: change logger in UpdateHandler - continue
- 10:50 AM Revision 365140b4 (taxeditor): ref #9851: change logger in UpdateHandler
- 10:30 AM Revision c9aeb938 (taxeditor): ref #9851: change logging - continue
- 10:26 AM bug #7342 (Worksforme): incomplete bean initialization with specific data causes LIEs
- 10:24 AM task #2250 (New): TODO use AbstractPagerImpl.hasResultsInRange() where possible
- Andreas Müller wrote:
> Is this still an open issue?
yepp! - 10:23 AM feature request #9884: Vaadin UI-disabled reporting
- the message dialog does not yet appear for all UIs ( e.g.: http://test.e-taxonomy.eu/cdmserver/phycobank/app/distribu...
- 09:28 AM Revision cdf554b8 (taxeditor): ref #9851: change logging
12/08/2021
- 11:06 PM bug #2449: Some or many names have an empty fullTitleCache though information is atomized
- Also the 2 examples from the description are handled correctly in the meanwhile.
- 11:05 PM bug #2449 (In Progress): Some or many names have an empty fullTitleCache though information is atomized
- Also Algaterra was saved correctly when the name was explicitly stored differently and then changed back.
Only rem... - 10:52 PM bug #2449: Some or many names have an empty fullTitleCache though information is atomized
- An empty fullTitleCache with atomized data was not found anywhere. Empty fullTitleCaches exist for fully empty data w...
- 06:09 PM task #9650: Update all titleCaches after upgrade of cache strategies and formatters
- last full cache updates: (e.g. for country labels)
algaterra_old: 2021-12-08
algaterra_new: 2021-12-08
asteraceae: 2... - 05:50 PM bug #9892 (Closed): Registration List: type status select in filter options broken
- 05:50 PM bug #9892 (Resolved): Registration List: type status select in filter options broken
- Applied in changeset commit:cdm-vaadin|cfe33fb8b0f01d160647015e4d373d8674f7fffd.
- 05:50 PM Revision cfe33fb8 (cdm-vaadin): fix #9892 solving broken height of type status mutiselect and turning RegistrationSearchFilter into proper java bean
- 05:11 PM bug #9856 (Closed): Cancel of taxon selection in move synonym results in exception
- Works as expected and code ok.
- 05:07 PM bug #9857 (Closed): TitleCache field of collector in specimen dialog should show collector title
- Works as expected.
- 04:49 PM feature request #9894 (Closed): Make primary collector editable for field unit
- FieldUnit has a field primaryCollector of type Person. This seems not to be editalbe in the FieldUnit details view ye...
- 04:41 PM bug #9881 (Closed): Newly created collector team is not shown in selection dialog
- Seems to work as expected.
- 04:09 PM bug #9893 (Closed): Name in source not shown
- This works for me and also code looks ok so I think it can be closed.
- 09:43 AM bug #9893 (Resolved): Name in source not shown
- Applied in changeset commit:taxeditor|701f467031a7950db4b5cde8d6c5a10127898cc0.
- 09:21 AM bug #9893 (Closed): Name in source not shown
- mail AM:
Hier gibt es eigentlich einen Name in Source „Vinca maior“, der aber nicht angezeigt wird.
Das Problem s... - 03:57 PM Revision a75a276d (taxeditor): typography in README
- 03:53 PM Revision 94c9a8c8 (taxeditor): cleaning up dev-linked-projects folder, adding README and doc for project-setup-wire-locally.sh
- 03:14 PM Revision 835e8eaf (taxeditor): Merge branch 'hotfix/5.28.1'
- 02:29 PM Revision 4884e7f6 (taxeditor): minor for update problems
- 10:05 AM Revision 713ed94d (taxeditor): fix #9893: fix the not shown content of descriptionelementsources
- 09:48 AM Revision d4bd0b54 (taxeditor): Updated version in pom / project files to taxeditor version : 5.28.1 and cdmlib version : 5.28.0
- 09:43 AM Revision 701f4670 (taxeditor): fix #9893: fix the not shown content of descriptionelementsources
12/07/2021
- 03:30 PM bug #9878: show MediaSpecimen media source citations in registration items
- please can you review this ticket? Only the vaadin part is relevant.
- 03:25 PM bug #9892: Registration List: type status select in filter options broken
- only one option is shown: "- unknown -"
- 03:24 PM bug #9892 (Closed): Registration List: type status select in filter options broken
- only one option is shown: "- unknown -"
- 10:22 AM Revision 786a7418 (taxeditor): ref #9861: do not show values when not applicable - continue
12/06/2021
- 05:17 PM Revision a650c2c1 (cdm-vaadin): ref #9498 providing feedback to users in case an unknown email has been entered
- 05:17 PM Revision 0e53a8de (cdmlib): ref #6161 improving method timing for callers & reporting reporting email not found
- 05:15 PM Revision 7c3a1444 (cdmlib): ref #6161 improving method timing for callers
- 04:27 PM Revision 642d1a82 (cdm-vaadin): ref #9859 ref #9877 adding Referrer-Policy: no-referrer HTTP header to prevent from Cross-domain Referer leakage
- 03:38 PM Revision 994d3b34 (cdm-vaadin): ref #9877 fixing readonly bug in AccountRegistrationPresenter
- 02:39 PM Revision be6d7785 (taxeditor): ref #9861: do not show values when not applicable
- 12:56 PM bug #9861: Provide possibility to set a field as inapplicable
- Norbert Kilian wrote
> Felder ausgrauen: ja und zugleich mit einem Wert wie "n.a." (= not applicable) füllen, damit ... - 10:12 AM Revision 8cbae4a4 (taxeditor): ref #9861: adapt tooltip text
- 09:06 AM Revision 33523822 (taxeditor): ref #9861: smaller changes to fit the logic of inapplicable and only applicable
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