Project

General

Profile

Activity

From 10/31/2021 to 11/29/2021

11/29/2021

11:22 PM feature request #9809: Implement further tags for RIS reference import
Book sections should work now (#9888) Andreas Müller
11:21 PM feature request #9889: Implement deduplication for RIS import
Maybe this is already partly implemented (see comment in description for #9809) Andreas Müller
11:17 PM feature request #9889 (Closed): Implement deduplication for RIS import
Most importantly needed for journals and books (as part of book sections) Andreas Müller
11:18 PM feature request #9888 (Resolved): Implement RIS import for book sections
This should be fixed except for deduplication which is handled in #9889 Andreas Müller
03:33 PM feature request #9888: Implement RIS import for book sections
Example see attachement. Andreas Müller
03:31 PM feature request #9888 (Closed): Implement RIS import for book sections
Hallo Andreas,
der RIS-Import von Artikeln und Büchern funktioniert jetzt. Das Einzige, was nicht funktioniert, is...
Andreas Müller
11:15 PM Revision 28259876 (cdmlib): cleanup
Andreas Müller
11:14 PM Revision 8e53bbac (cdmlib): ref #9888 add book section handling to RIS import
Andreas Müller
03:51 PM Revision 685db704 (cdmlib): ref #9359 update commons-io to 2.11.0 in cdmlib
Andreas Müller
02:07 PM task #9887 (Rejected): remove jdk15 classifier from json-lib
I did some rearch. json-lib on maven central is only available as json-lib-2.4-jdk15.jar and json-lib-2.4-jdk13.jar. ... Andreas Müller
12:49 PM task #9887 (Rejected): remove jdk15 classifier from json-lib
In all/most poms json-lib has a classifier
~~~
<classifier>jdk15</classifier>
~~~
It is unclear/not documente...
Andreas Müller
01:54 PM Revision c4c2f38d (taxeditor): ref #9887 add documentation to required json-lib jdk classifier in taxeditor
Andreas Müller
01:53 PM Revision d2eb469f (cdmlib): ref #9887 add documentation to required json-lib jdk classifier in cdmlib
Andreas Müller
01:38 PM Revision 89e7c142 (cdmlib): minor
Andreas Müller

11/27/2021

12:23 AM Revision 2a5543c4 (taxeditor): ref #9359 remove further libraries from lib folder in taxeditor (remaining only tools and swtchart) (cont. III)
Andreas Müller
12:17 AM Revision 9c42e66c (taxeditor): ref #9359 remove further libraries from lib folder in taxeditor (remaining only tools and swtchart) (cont. II)
Andreas Müller
12:13 AM Revision 4a655f94 (taxeditor): ref #9359 remove further libraries from lib folder in taxeditor (remaining only tools and swtchart) (cont.)
Andreas Müller
12:11 AM Revision 23a13680 (taxeditor): cleanup
Andreas Müller
12:11 AM Revision 38727a28 (taxeditor): ref #9359 remove further libraries from lib folder in taxeditor (remaining only tools and swtchart)
Andreas Müller

11/26/2021

06:10 PM task #9886 (In Progress): Create cdmlib modul cdmlib-api
A first implementation with moving UuidAndTitleCache to the new module has been implement. Vaadin and TaxEditor build... Andreas Müller
02:44 PM task #9886 (In Progress): Create cdmlib modul cdmlib-api
This modul in future will hold all classes and resources required for using cdmlib in a loosely coupled way.
Howev...
Andreas Müller
05:44 PM Revision 58400774 (taxeditor): ref #9886 adapt taxeditor to cdmlib-api changes (cont.)
Andreas Müller
05:36 PM Revision e6f1aeb9 (cdmlib): ref #9388 adding sources to MediaDTO
Andreas Kohlbecker
05:36 PM Revision e30c8166 (cdmlib): code cleaning
Andreas Kohlbecker
05:35 PM Revision 41299e2e (cdm-dataportal): ref #9388 media specimen source for name page complete but with citation format problems
Andreas Kohlbecker
04:57 PM Revision 3a9187cb (taxeditor): ref #9886 adapt taxeditor to cdmlib-api changes
Andreas Müller
03:48 PM Revision 2528cc0f (cdmlib): cleanup
Andreas Müller
03:46 PM Revision b625ecad (cdm-dataportal): avoiding invalid calls to ./{cdm-entity-uuid}/taggedText.json - 2
Andreas Kohlbecker
03:05 PM Revision b68853e5 (cdmlib): ref #9886 first implementation for cdmlib-api with only UuidAndTitleCache moved to new module
Andreas Müller
03:03 PM Revision 233fb241 (cdm-dataportal): avoiding invalid calls to ./{cdm-entity-uuid}/taggedText.json
Andreas Kohlbecker
01:32 PM Revision 0474e8d1 (cdm-dataportal): converting define into const
Andreas Kohlbecker
01:15 PM Revision 50f675e7 (cdm-dataportal): ref #9388 showing media specimen sources in compact registration dto (fixes search reults and 1 case in name page) - bug fix
Andreas Kohlbecker
12:28 PM Revision 0991781d (cdm-dataportal): ref #9388 showing media specimen sources in compact registration dto (fixes search reults and 1 case in name page)
Andreas Kohlbecker
12:05 PM bug #824 (Closed): Rank labes and Rank names inconsitent
I removed the test and close the ticket. Andreas Müller
11:06 AM bug #824: Rank labes and Rank names inconsitent
I agree with this solution. Please decide how to further proceed with this ticket.
Shall we delete the test method?
Andreas Kohlbecker
12:02 PM Revision fc26406a (cdmlib): ref #824 remove test (testRankByNameConsistency_issue824) and cleanup
Andreas Müller
10:03 AM Revision 53521cab (taxeditor): ref #9800: correct handling of enabled/disabled fields in quantitative data dialog
Katja Luther

11/25/2021

11:26 PM Revision 9816d977 (cdm-vaadin): ref #9878 fix regex
Andreas Müller
04:23 PM bug #9878 (Resolved): show MediaSpecimen media source citations in registration items
the issue in the web ui (vaadin) is fixed, the data portal issues are handled in #9388 Andreas Kohlbecker
03:01 PM bug #9878 (In Progress): show MediaSpecimen media source citations in registration items
The problem with this issue is that we are suppressing the "designated by ..." reference by just removing all separa... Andreas Kohlbecker
04:22 PM feature request #9388: show media specimen source in all pages
further example:
![](picture548-1.png)
Andreas Kohlbecker
03:54 PM Revision 14faf02d (cdmlib): ref #824 adapt app-import to rank.getByLatinName (cont.)
Andreas Müller
03:42 PM bug #824: Rank labes and Rank names inconsitent
This seems to be a misunderstanding. I did not mean that the issue is "fixed" but according to note-1 it is not an is... Andreas Müller
11:52 AM bug #824: Rank labes and Rank names inconsitent
Yes, still open. I created a Test to reproduce this issue. However it is completely unclear what is being meant by "*... Andreas Kohlbecker
03:27 PM Revision 8b853f4a (cdm-vaadin): ref #9878 restoring media type source citations by making use of tagged text cropping
Andreas Kohlbecker
03:26 PM Revision 28538cdf (cdmlib): ref #9878 tagged text crop method
Andreas Kohlbecker
03:19 PM Revision 0229525a (cdmlib-apps): ref #824 adapt app-import to rank.getByLatinName
Andreas Müller
03:18 PM Revision 3b52542d (cdmlib-apps): ref #694 adapt appimport to new DescriptionElementService
Andreas Müller
03:16 PM Revision 2c4c98fc (cdmlib-apps): cleanup
Andreas Müller
02:58 PM Revision 56f39f93 (cdmlib): dummy
Andreas Müller
02:51 PM Revision 7316cc00 (cdmlib): ref #824 rename Rank.getByNameXXX to getByLatinNameXXX
Andreas Müller
02:15 PM bug #9885 (New): Write tests for all rowWrapper issues
There are two basic tests in DescriptiveDatasetServiceTest, but actually both tests failing in suite. Katja Luther
02:01 PM Revision 6fbe489c (cdmlib): add explanation why set test to ignore
Katja Luther
01:02 PM Revision 770b2aea (taxeditor): ref #9842: adaptions to changes in descriptiveDatasetService
Katja Luther
12:39 PM Revision 8d9f9e27 (cdmlib): cleanup
Andreas Müller
12:23 PM Revision e6b5b074 (cdmlib): ignore test
Katja Luther
11:50 AM Revision 582490c7 (cdmlib): ref #9842: adaption in descriptivedataset service
Katja Luther
11:44 AM Revision ccc93896 (cdmlib): ref #824 test to reproduce rankByName consistency issue
Andreas Kohlbecker
11:43 AM Revision efb63169 (cdmlib): ref #834 test to reproduce rankByName consistency issue
Andreas Kohlbecker
11:36 AM Revision c15e4e1a (cdmlib): ref #9842: first steps removing objects in dto creation - continue
Katja Luther
11:27 AM Revision 4012cbc4 (cdmlib): ref #9842: first steps removing objects in dto creation - continue
Katja Luther
11:21 AM Revision 0d3c622a (cdm-vaadin): ref #9884 fixing PasswordResetTokenStore bean binding problem in presenter
Andreas Kohlbecker
11:04 AM bug #9851: Problems during search for updates when network delay is too big
**NOTE**: "Nur die Connect Versuche zum cdm-server gehen über den Proxy, die Update-Request gehen einen anderen Weg." Andreas Kohlbecker
11:02 AM bug #9851: Problems during search for updates when network delay is too big
with the following settings in `{eclipse-installation-folder}/configuration/.settings/org.eclipse.core.net.prefs`
...
Andreas Kohlbecker
10:05 AM Revision ed7c8f19 (cdmlib): ref #9842: first steps removing objects in dto creation
Katja Luther
09:56 AM Revision 43855127 (taxeditor): specify description type
Katja Luther

11/24/2021

05:38 PM task #7139 (Rejected): consider using spring profiles to enable vaadin UI contexts
superseded by #9884 Andreas Kohlbecker
05:35 PM Revision 3a2f0b2a (cdm-vaadin): ref #7139 cleaning up for rejected ticket
Andreas Kohlbecker
05:32 PM feature request #9497 (Closed): User self registration service
Andreas Kohlbecker
05:32 PM feature request #9877 (Resolved): Account Registration UI
please review Andreas Kohlbecker
05:31 PM feature request #9498 (Closed): Password Recovery, Registration and Login Dialog Tab fully functional
Andreas Kohlbecker
05:30 PM feature request #6161 (Closed): Service and webservice to recover forgotten passwords
I think we can keep it as it is. Andreas Kohlbecker
05:29 PM bug #3811 (Closed): Null pointer access in eu.etaxonomy.cdm.remote.service.DataController
fixed! Andreas Kohlbecker
10:57 AM bug #3811 (New): Null pointer access in eu.etaxonomy.cdm.remote.service.DataController
still open and a really wired interim solution to this problem. Andreas Kohlbecker
05:26 PM Revision a2fb3579 (cdmlib): ref #3811 resoring lost code line and solving "Null pointer access" problem
Andreas Kohlbecker
05:19 PM Revision 8cb8fc5c (cdmlib): ref #9497 user account self registration: AccountCreationRequest only with email-address
- request tokens only with email address possible
- refactoring request tokens class hierarchy
- ... and token stores
Andreas Kohlbecker
05:11 PM feature request #9884 (Resolved): Vaadin UI-disabled reporting
Andreas Kohlbecker
05:02 PM feature request #9884 (Closed): Vaadin UI-disabled reporting
Currently the attempt to access an vaadin UI that is disabled causes a incomprehensible exception which hardly can be... Andreas Kohlbecker
05:08 PM Revision 7f6f8587 (cdm-vaadin): ref #9884 refactoring UI enablement:
- ui beans never are null
- disabled beans have state.enabled=false
- uis throw UIDisabledException
- ErrorV...
Andreas Kohlbecker
03:11 PM bug #9883 (New): Swagger-UI respects https
Andreas Kohlbecker
03:05 PM Revision 551708da (cdm-vaadin): ref #9877 Account Registration View implemented - LoginPresenter
Andreas Kohlbecker
03:04 PM Revision bc4c64f2 (cdm-vaadin): ref #9877 Account Registration View implemented
Andreas Kohlbecker
01:42 PM Revision 83912d04 (taxeditor): ref #9851: remove experimental code - continue
Katja Luther
11:58 AM bug #9851: Problems during search for updates when network delay is too big
Using socks proxy can defined by adding
proxyData/SOCKS/hasAuth=false
proxyData/SOCKS/host=127.0.0.1
proxyData/SO...
Katja Luther
11:43 AM bug #9851: Problems during search for updates when network delay is too big
https://stackoverflow.com/questions/5857499/how-do-i-configure-the-proxy-settings-so-that-eclipse-can-download-new-pl... Katja Luther
11:23 AM task #2773 (New): TestingTermInitializer & CdmIntegrationTest must not use hardcoded DataTypeFactory
Andreas Müller
10:37 AM task #2773 (Feedback): TestingTermInitializer & CdmIntegrationTest must not use hardcoded DataTypeFactory
not without investigating the code. Could you please take over this ticket? Andreas Kohlbecker
09:52 AM Revision 91aca92e (taxeditor): cleanup
Andreas Müller
09:47 AM Revision 2e23d727 (taxeditor): ref #9882: changes in Manifest.mf
Katja Luther
09:41 AM Revision 2f8eda20 (taxeditor): ref #9882: use service method to delete description element
Katja Luther
08:36 AM Revision e2ab596e (taxeditor): ref #9882: remember operations and execute while saving
Katja Luther
08:32 AM bug #9882 (In Progress): Null argument when deleting description in bulkeditor
The original problem is solved, but there is another issue. The deletion of the description elements is not solved by... Katja Luther
08:29 AM bug #9882 (Closed): Null argument when deleting description in bulkeditor
mail AM:
null beim Löschen einer Description:
~~~ text
last remote method : http://api.cybertaxonomy.org:80/fl...
Katja Luther

11/23/2021

11:12 PM feature request #2506 (In Progress): (Type-) Specimens may need status
Andreas Müller
10:58 PM feature request #7619: Registration Item: better layoout to avoid dao element overlapping
Is this still an open issue? If yes, please adapt category/target version and/or project. Andreas Müller
10:57 PM bug #8023: IndexOutOfBoundsException caused by RegistrationWorkingSet.getRegistrationDate()
Andreas Müller wrote:
> Is this still an open issue? If yes please add category and adapt assignee and or target ver...
Andreas Müller
10:41 PM feature request #804 (Feedback): Integrationtest for TextData.getPreferredLanguageString()
Can you give a suggestion how the test should look like?
Which service/persistence layer method to use?
Andreas Müller
10:21 PM feature request #694 (Resolved): FeatureTreeService and DescriptionElement implemented
Andreas Müller
10:09 PM Revision 6490911f (cdmlib): ref #694 fix DescriptionElementService in httpInvokerServices.xml
Andreas Müller
08:35 PM task #2250 (Feedback): TODO use AbstractPagerImpl.hasResultsInRange() where possible
Is this still an open issue? Andreas Müller
08:08 PM Revision 162b8a2c (taxeditor): ref #694 add DescriptionElementService to TaxEditor
Andreas Müller
07:45 PM bug #3811 (Feedback): Null pointer access in eu.etaxonomy.cdm.remote.service.DataController
Is this still an open issue? Andreas Müller
07:27 PM task #2773: TestingTermInitializer & CdmIntegrationTest must not use hardcoded DataTypeFactory
do you know if this is still an open issue? Andreas Müller
07:13 PM bug #824 (Feedback): Rank labes and Rank names inconsitent
I guess we can close this ticket? Andreas Müller
07:01 PM Revision 468cd076 (cdmlib): cleanup
Andreas Müller
06:56 PM Revision 803bc957 (cdmlib): ref #694 add DescriptionElementService and move some methods (cont.)
Andreas Müller
06:42 PM Revision b83da0d9 (cdmlib): ref #694 add DescriptionElementService and move some methods
Andreas Müller
06:14 PM Revision e5d9cdab (taxeditor): remove eu.etaxonomy.cdm.io.operation.config from MANIFEST.MF
Andreas Müller
06:11 PM Revision 99810eaa (taxeditor): remove FeatureNodeService from TaxEditor
Andreas Müller
05:33 PM Revision 0247feba (cdmlib): cleanup and add null handling for isDeletable
Andreas Müller
05:32 PM Revision 13386866 (cdmlib): remove deprecated featureTreeService and featureNodeService and test classes
Andreas Müller
03:31 PM Revision 6cf3ae28 (taxeditor): remove deprecated featureTreeService and featureNodeService from CdmApplicationRemoteConfiguration
Andreas Müller
03:27 PM Revision f4a56b86 (cdmlib): remove further featureTree and featureNodeService occurrences
Andreas Müller
02:41 PM Revision 31928231 (cdmlib): cleanup
Andreas Müller
02:40 PM Revision 50e1fa63 (cdmlib): remove deprecated featureNodeService from ICdmRepository (cont.)
Andreas Müller
02:40 PM Revision 36458eca (cdmlib): remove deprecated featureNodeService from ICdmRepository
Andreas Müller
02:30 PM Revision 7a743d97 (cdmlib): remove deprecated featureTreeService from ICdmRepository
Andreas Müller
02:11 PM Revision 37c7b75c (cdmlib-apps): cleanup and remove usage of feature tree service
Andreas Müller
01:58 PM Revision c44b3c98 (cdmlib): cleanup and remove usage of feature tree service
Andreas Müller
01:14 PM bug #9881 (Resolved): Newly created collector team is not shown in selection dialog
this should be fixed, please review. Katja Luther
08:08 AM bug #9881 (Closed): Newly created collector team is not shown in selection dialog
After creating a new collector team from the selection dialog, the team does not show up in the selection dialog. Katja Luther
10:04 AM Revision 98523081 (taxeditor): ref #9881: fix not showing the newly created team in collector selection dialog
Katja Luther
08:04 AM bug #9880 (New): Add active flag to user bulkeditor
In some instances are a lot of inactive users, we should add the inactive flag to the bulkeditor and a possibility to... Katja Luther

11/22/2021

10:04 PM feature request #9879: Short title for field and derived units
AM (aus Antwort auf die Mail von WGB):
Zu 2.: Es gibt im Modell schon den sog. „identityCache“ der für kürzere Lab...
Andreas Müller
09:57 PM feature request #9879 (New): Short title for field and derived units
WGB:
Der **Titel** mit seinem langen Text ist sehr groß – folgt vermutlich dem normalen Titelformat – kann man das...
Andreas Müller
06:02 PM bug #9878 (Closed): show MediaSpecimen media source citations in registration items
If lectotype= published image, image reference and refdetail not shown.
see marked areas for Vaadin
![](picture27...
Wolf-Henning Kusber
05:56 PM Revision b659f5ea (cdm-vaadin): ref #9877, ref #9498 LoginDialog Tab for registration request ready and account registration ui implemented
Andreas Kohlbecker
05:53 PM feature request #9877 (Closed): Account Registration UI
implement a separate UI for the self registration of user accounts Andreas Kohlbecker
05:52 PM feature request #9498 (In Progress): Password Recovery, Registration and Login Dialog Tab fully functional
Andreas Kohlbecker

11/20/2021

10:01 AM Revision d6d2c0f7 (cdmlib): cleanup
Andreas Müller

11/19/2021

03:29 PM Revision da8f3c20 (cdmlib): ref #9497 AccountRegistrationService tesing for existing usernames & adding exist check methods to dao
Andreas Kohlbecker
02:42 PM Revision a82bec24 (cdmlib): ref #9497 fixing class string for IAccountRegistrationService in httpInvokerServices.xml
Andreas Kohlbecker
02:04 PM Revision 3dae18aa (cdmlib): ref #9497 adding AccountRegistrationService to ICdmRepository
Andreas Kohlbecker
01:54 PM Revision a6d6009b (taxeditor): ref #9497 adding AccountRegistrationService
Andreas Kohlbecker
01:38 PM Revision 60f1920d (cdmlib): cleanup and renaming some functional test classes (cont. II)
Andreas Müller
01:24 PM bug #9876: If no distribution has a status the mapUriParams are missing required parameters
chaning the subject to better reflect the problem Andreas Kohlbecker
12:04 PM bug #9876 (New): If no distribution has a status the mapUriParams are missing required parameters
This was observed for Begonia aptera on FM prospective (http://portal.cybertaxonomy.org/flora-malesiana-prospective/c... Andreas Müller
01:05 PM Revision 9cf6c404 (cdmlib): cleanup and renaming some functional test classes (cont.)
Andreas Müller
12:58 PM Revision 605013a7 (cdmlib): cleanup and renaming some functional test classes
Andreas Müller
09:14 AM Revision bb06cc67 (cdm-vaadin): ref #9497 adapting to rafacored user self registration classes
Andreas Kohlbecker
09:12 AM Revision b3a4df37 (cdmlib): ref #9497 fixing test calls bean binding
Andreas Kohlbecker
08:12 AM Revision f5df5621 (cdmlib): ref #9497 adding AccountRegistrationService to http invoker config
Andreas Kohlbecker

11/18/2021

05:50 PM feature request #9497 (Resolved): User self registration service
Applied in changeset commit:cdmlib|002f394d7a5cc8b251f99b25b951d46410223979. Andreas Kohlbecker
05:50 PM Revision 002f394d (cdmlib): fix #9497 User self registration service implemented
- more interfaces and abstract classes
- AccountRegistrationService implemented
- test implemented
Andreas Kohlbecker
04:00 PM task #9875 (New): Atomize Salvador specimen data
AM:
... Grundsätzlich würde es ja mehr Sinn machen die textbasierten Specimen zu versuchen zu atomisieren. Da sie ...
Andreas Müller
03:49 PM feature request #8931: Taxeditor supports https
i think we should move this ticket back to 5.15 or even to 5.14 Andreas Kohlbecker
03:45 PM feature request #8931 (Closed): Taxeditor supports https
Andreas Kohlbecker
03:00 PM feature request #8931 (Feedback): Taxeditor supports https
Andreas Kohlbecker wrote:
> There are no problems connecting the production server api.cybertaxonomy.org:443
>
> ...
Andreas Müller
03:42 PM Revision e9fc0c4f (taxeditor): some experimental code for proxy handling - continue
Katja Luther
02:51 PM bug #9873: Open in... in search view should show distribution editor
Andreas Müller wrote:
> Maybe we can do a count before opening the distribution editor. If count is >100 (or any oth...
Andreas Müller
08:52 AM bug #9873: Open in... in search view should show distribution editor
Maybe we can do a count before opening the distribution editor. If count is >100 (or any other number) we may ask the... Andreas Müller
08:16 AM bug #9873: Open in... in search view should show distribution editor
mail WGB:
in principle I would expect the same behaviour as in the Taxon Navigator (i.e. opening the subtree) – so...
Katja Luther
02:34 PM feature request #2506: (Type-) Specimens may need status
NaK:
Bei den Kakteen-Typus-Angaben stoße ich immer wieder auf „not preserved“ und „not found at..“, und um diese I...
Andreas Müller
02:22 PM Revision 7f5d26de (taxeditor): some experimental code for proxy handling - will be removed later
Katja Luther
10:57 AM Revision 52962917 (cdmlib): ref #9497 AccountCreationRequest and TokenStore
Andreas Kohlbecker
10:51 AM Revision d43842b0 (cdmlib): ref #9497 abstract base classes for Request tokens and stores
Andreas Kohlbecker
10:50 AM feature request #9859 (Resolved): Password Recovery UI
ready for review Andreas Kohlbecker
10:49 AM feature request #9498 (Closed): Password Recovery, Registration and Login Dialog Tab fully functional
Andreas Kohlbecker
10:12 AM Revision f2099562 (cdmlib): ref #9758 better default settings for send mail - port number
Andreas Kohlbecker
08:14 AM bug #9874 (New): Calculate endemism automatically for higher levels (in cuba)
mail WGB:
bei der Cuba Datenbank gibt’s ja eine eindeutige 3-stufige Hierarchie: Cuba – Cuba W/C/E – Provinz.
Es ...
Katja Luther

11/17/2021

05:32 PM feature request #1580 (Duplicate): Doubtful flag or presence attribute for specimen in collection
Andreas Müller
05:26 PM bug #9861: Provide possibility to set a field as inapplicable
This is a feature currently needed for Lactucinae. Therefore we should evaluate if we can implement it soon. Andreas Müller
05:11 PM Revision e788634d (cdmlib): ref #9758 switching to other javax.mail implementation (step 2) and fixing port issues in test
Andreas Kohlbecker
04:18 PM bug #9873 (New): Open in... in search view should show distribution editor
We should discuss whether this should open only the selected taxon or the subtree of the selected taxon.
Katja Luther
03:21 PM Revision d000acae (cdmlib): ref #9758 switching to other javax.mail implementation
Andreas Kohlbecker
02:07 PM bug #9872 (New): Selecting cancel in "many records selected" dialogue for specimen tree editor has not effect.
In specimen tree editor when search returns a larger number of records a warning appears that many records were selec... Andreas Müller
12:00 PM Revision 9cf3bc1e (cdm-vaadin): ref #9859 PasswordResetUI renamed to UserAccountSelfManagementUI to open it for more general purposes
Andreas Kohlbecker
11:59 AM feature request #9859: Password Recovery UI
to enable the new ui in all cdm instances:
~~~
cd /opt/cdmserver/.cdmLibrary
find -maxdepth 2 -type f -name 'va...
Andreas Kohlbecker
11:12 AM Revision 733c5a6a (cdmlib): ref #9758 better default settings for send mail
Andreas Kohlbecker
09:58 AM bug #9015 (Resolved): Comparator for Character Matrix creates strange result
Hopefully this is fixed with rev 108ef8d8. With the current implementation I did not get this problem anymore. Please... Katja Luther
09:53 AM Revision d09294f4 (cdmlib): ref #9802, #9843: fix display label in rowwrapper
Katja Luther

11/16/2021

11:26 PM Revision f5fa0328 (cdmlib): ref #6161 fix de-duplication code for password encoding
Andreas Müller
09:13 PM Revision 70e77a98 (cdmlib): logging send email configuration
Andreas Kohlbecker
06:29 PM Revision 3bb87c3f (cdmlib): minor
Andreas Müller
05:15 PM Revision a95583db (cdm-dataportal): ref #9715 fixing bug related to fieldUnit short label
Andreas Kohlbecker
04:02 PM feature request #9839 (New): Show distanceToGround on the occurrence page
adapting ticket subject and category .... Andreas Kohlbecker
12:52 PM feature request #9839: Show distanceToGround on the occurrence page
If the footnote idea was only a workaround and the distance to water surface should be added to the titleCache please... Wolf-Henning Kusber
04:00 PM task #9871: Use identity cache for specimens in TaxEditor
The search dialog part is mostly a duplicate for #5952 Andreas Müller
03:57 PM task #9871 (New): Use identity cache for specimens in TaxEditor
In facts view and searches specimen labels are difficult to read as they use the titleCache which is often too long a... Andreas Müller
01:59 PM Revision b5dd244b (taxeditor): change ip of SOCKS host
Katja Luther
01:15 PM feature request #9870 (New): [DISCUSS] Media for gathering event
Maybe also gathering event needs media attached.
WGB: (in email discussion on #9095)
Was ist ein “reines Bild“,...
Andreas Müller
12:05 PM feature request #9869 (Closed): Page showing IPNI authors used in PhycoBank
Additional to the page "publish to IPNI" Zusatzdaten, Marker, "publish to IPNI"
https://www.phycobank.org/cdm_datapo...
Wolf-Henning Kusber
10:22 AM feature request #9868 (New): [DISCUSS] FeatureState map instead of Set
Maybe we should implement inapllicable-if and only-applicable-if not as Set<FeatureState> but as Map<Feature,Applicab... Andreas Müller
10:21 AM Revision 15653ef4 (cdmlib): ref #9843: adapt other uses of SortableTaxonNodeQueryResult- continue
Katja Luther
09:20 AM feature request #8775 (In Progress): Improve (rapid) data entry into characater matrix for categorical data
Katja Luther
08:45 AM feature request #9858 (Closed): Add update result to aggregation algorithms
Use the update result and works as expected, the code looks good as well. Katja Luther
08:42 AM bug #9843 (Resolved): When adding new descriptions it should not be necessary to load the complete matrix
This is fixed now, please review. Katja Luther

11/15/2021

04:02 PM Revision 47211cfe (cdmlib): ref #9843: adapt other uses of SortableTaxonNodeQueryResult- continue
Katja Luther
03:56 PM Revision ac3214b3 (cdm-vaadin): ref #9859 & ref #9498 PasswordRevoveryEvent as UserAccountEvent with action; fixing reset url template - fully functinal now
Andreas Kohlbecker
03:49 PM Revision 9c05c99d (cdmlib): ref #6161 fixing read-only bug in PasswordResetService and adding support email address to email messages
Andreas Kohlbecker
03:49 PM Revision 87cf034d (cdmlib): ref #6161 de-duplicating code for password encoding
Andreas Kohlbecker
03:49 PM Revision ef2b56b4 (cdmlib): ref #9862 better password contraint violation message concatenation
Andreas Kohlbecker
01:56 PM Revision 09cf65f5 (cdmlib): ref #9843: adapt other uses of SortableTaxonNodeQueryResult
Katja Luther
01:18 PM Revision 108ef8d8 (cdmlib): ref #9843: fix taxonnode dto creation and add parent uuid - continue
Katja Luther
01:09 PM Revision 3fede6d9 (taxeditor): ref #9843: only update descriptions coming with result of aggregation
Katja Luther
12:35 PM Revision 740aabcf (cdmlib): ref #9843: fix taxonnode dto creation and add parent uuid
Katja Luther
10:57 AM Revision 4182e57e (taxeditor): minor
Katja Luther
10:51 AM task #9866: Import further Salvador images
see also #6252#note-13 Andreas Müller
10:50 AM task #6252: Implement image import for salvador
WGB:
Kurz zum Verständnis: Es gibt 3 Arten von Salvador-Images:
1. Die hier referenzierten Zeichnungen aus der ...
Andreas Müller
10:47 AM task #9867 (New): Import taxon level drawing from other publications
WGB:
... Eine Reihe von zusätzlichen Taxon-Level Zeichnungen aus einer anderen Publikation (Witsberger, „Arboles ...
Andreas Müller
09:41 AM bug #6296 (Closed): Simple search for common names returns duplicates
Code cleaning done. Katja Luther
09:40 AM Revision c57b7a71 (cdmlib): ref #6296: cleanup
Katja Luther

11/12/2021

05:35 PM Revision 49e32e18 (cdmlib): revert session.clear() during updateCaches
Andreas Müller
05:27 PM Revision 56328c4d (cdm-vaadin): ref #9859 Password Reset View with better validation
Andreas Kohlbecker
05:23 PM Revision 6e8ebcb6 (cdmlib): ref #5952, ref #5951 add identityCache formatting to SpecimenOrObservationBase cache strategies
Andreas Müller
04:29 PM Revision d04974c4 (cdmlib): cleanup
Andreas Müller
04:28 PM Revision 1960a5c2 (cdmlib): fix toString in UpdateResult
Andreas Müller
04:28 PM Revision 048deb5b (cdmlib): clear session in cache update
Andreas Müller
04:06 PM Revision 0a540add (cdm-vaadin): ref #9859 Password Recovery UI and view implemented - 2
Andreas Kohlbecker
04:05 PM feature request #9862: centralized password policy enforcement validator
the commit:4b4dfff4 also contains a `@ValidPassword` annotation which can be used at model classes
please review
Andreas Kohlbecker
03:58 PM feature request #9862 (Resolved): centralized password policy enforcement validator
Applied in changeset commit:cdmlib|4b4dfff4929970b5b547c1f21b10359fd3f39c50. Andreas Kohlbecker
02:37 PM feature request #9862 (Closed): centralized password policy enforcement validator
Currently rules to validate the security of passwords are only implemented in the TaxEditor (`eu.etaxonomy.taxeditor.... Andreas Kohlbecker
04:03 PM Revision 096c0a8e (cdmlib): fix #9862 fixing imports
Andreas Kohlbecker
03:58 PM Revision 4b4dfff4 (cdmlib): fix #9862 implementing central password constraint validation classes and annotation
Andreas Kohlbecker
03:58 PM Revision 61312327 (cdmlib): documentation on data source property keys
Andreas Kohlbecker
03:48 PM task #9864 (Feedback): Evaluate "naturalearthdata" as possble dataset for maps
http://www.diva-gis.org/Data has much better data for our purpose as they have also administrative regions of the lev... Andreas Kohlbecker
02:51 PM task #9864 (Feedback): Evaluate "naturalearthdata" as possble dataset for maps
Franck:
I also found recently an interesting dataset : https://www.naturalearthdata.com
It seems to be more up-to...
Andreas Müller
03:21 PM task #9866 (New): Import further Salvador images
Note: currently information/data is still missing for implementation
WGB (2019):
ich bereite einen Arbeitsauf...
Andreas Müller
03:12 PM feature request #9865 (New): Formatter for common names of a taxon
wGB:
bevor ich anfange, das selbst zu programmieren: Wie realistisch ist eine CDM-light Implementierung eines Comm...
Andreas Müller
03:10 PM bug #6296: Simple search for common names returns duplicates
Katja, can you have a look? Closing this ticket is needed to cleanup open Salvador issues and to finally close the ac... Andreas Müller
02:55 PM bug #6207 (Closed): Import Salvador images
Open issues were moved to other tickets therefore I guess we can close this ticket. Andreas Müller
02:46 PM feature request #9853: [DISCUSS] Integrate collecting areas into fieldUnit/derivedUnit titleCache (or citation)
WGB:
... tatsächlich – ich hatte wohl nur auf den Output gesehen. Santa Ana ist ein Departamento – sehr gut. Das s...
Andreas Müller
02:43 PM feature request #9863 (New): Import Salvador municipios
WGB:
... Municipio ist eigentlich die 3. Stufe – hier findet sich eine Liste: https://es.wikipedia.org/wiki/Anexo:...
Andreas Müller
02:28 PM feature request #9839: Show distanceToGround on the occurrence page
Henning, please can you answer Andreas M's questions? Andreas Kohlbecker
12:19 PM feature request #9839: Show distanceToGround on the occurrence page
Is there a reason why you moved this to "Reviewed Next Major Release"?
In the ticket description it is said that t...
Andreas Müller
02:26 PM feature request #9859 (In Progress): Password Recovery UI
Andreas Kohlbecker
02:24 PM Revision ff40fbae (cdm-vaadin): ref #9859 Password Recovery UI and view implemented
Andreas Kohlbecker
12:51 PM bug #9861 (In Progress): Provide possibility to set a field as inapplicable
mail NK:
es gibt noch ein Desideratum, das wir im Projekt schon identifiziert hatten und das auch Murat schon mal ...
Katja Luther
12:48 PM feature request #9420: Harmonize Update- and ImportResult
Discussion on how to use UpdateResult in aggregations:
KL:
leider gibt es noch keine Dokumentation, wann was ve...
Andreas Müller
12:46 PM feature request #9420: Harmonize Update- and ImportResult
Discussion on "include()" handling in Update/DeleteResult:
AM:
>Ich habe mir den Code jetzt noch nicht genau an...
Andreas Müller
12:10 PM Revision 7f84929f (cdmlib-apps): cleanup and change for CacheUpdater to run without long running task
Andreas Müller
12:06 PM task #9650: Update all titleCaches after upgrade of cache strategies and formatters
Updated all caches for databases on integration server Andreas Müller
12:05 PM task #9849 (Closed): Remove trailing full stops from specimen titleCaches
Andreas Müller wrote:
> @AK: This is fixed now but maybe we still need to adapt tests in dataportal.
All tests ar...
Andreas Müller
11:49 AM feature request #6161 (Resolved): Service and webservice to recover forgotten passwords
... or we implement it similar to the ProgressMonitoring services which also handle asynchronous task but differently... Andreas Müller
11:46 AM feature request #6161: Service and webservice to recover forgotten passwords
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
>
> > I added the new service to httpInvoker and CdmApplication...
Andreas Müller
11:36 AM feature request #6161 (Feedback): Service and webservice to recover forgotten passwords
Andreas Müller wrote:
> I added the new service to httpInvoker and CdmApplicationRemoteConfiguration
I am not s...
Andreas Kohlbecker
11:17 AM Revision 89700768 (cdm-dataportal): fix selenium tests for updated caches (cont.)
Andreas Müller
11:00 AM Revision 38ba0192 (cdm-dataportal): fix selenium tests for updated caches (cont.)
Andreas Müller
10:29 AM Revision 962f18a7 (cdm-dataportal): fix DescriptionElementsTest
Andreas Müller
01:51 AM Revision 6e42c2eb (cdm-dataportal): fix selenium tests for updated caches (cont.)
Andreas Müller
12:44 AM Revision 2ea94a82 (cdm-dataportal): fix selenium tests for updated caches (cont.)
Andreas Müller

11/11/2021

11:35 PM Revision c8ad8015 (cdm-dataportal): fix selenium tests for updated caches (cont.)
Andreas Müller
10:37 PM Revision ca009e2e (cdm-dataportal): fix selenium tests for updated caches (cont.)
Andreas Müller
10:04 PM Revision 50d53301 (cdm-dataportal): fix selenium tests for updated caches (cont.)
Andreas Müller
09:42 PM Revision 6a0acdd6 (cdm-dataportal): fix selenium tests for updated caches
Andreas Müller
08:19 PM Revision 7b56b4b7 (cdmlib): ref #6161 add passwordReset service to httpInvoker (cont. II)
Andreas Müller
08:16 PM Revision 89e19a51 (cdmlib): minor
Andreas Müller
06:11 PM Revision dbbb80b5 (cdm-dataportal): fix file start
Andreas Müller
05:56 PM Revision 4a6a3ad3 (cdm-dataportal): ref #9650 , ref #9849 update some dataportal tests to updated caches
Andreas Müller
05:37 PM Revision f29e7549 (cdmlib): ref #6161 add passwordReset service to httpInvoker (cont.)
Andreas Müller
05:24 PM Revision e187ab5a (taxeditor): adapt TaxEditor to new factory method for CdmEntityIdentifier
Andreas Müller
05:23 PM Revision 2ffdc437 (taxeditor): ref #6161 add passwordReset service to CdmApplicationRemoteConfiguration (cont.)
Andreas Müller
04:54 PM feature request #6161: Service and webservice to recover forgotten passwords
I added the new service to httpInvoker and CdmApplicationRemoteConfiguration Andreas Müller
04:51 PM Revision 708b7586 (taxeditor): ref #6161 add passwordReset service to CdmApplicationRemoteConfiguration
Andreas Müller
04:50 PM Revision 26854506 (cdmlib): ref #6161 add passwordReset service to httpInvoker
Andreas Müller
04:48 PM Revision dcb5fe38 (cdmlib): cleanup
Andreas Müller
04:08 PM feature request #9858: Add update result to aggregation algorithms
should be fixed. Please review. Andreas Müller
04:06 PM bug #9843 (In Progress): When adding new descriptions it should not be necessary to load the complete matrix
The blocking issue (#9858) is resolved now Andreas Müller
04:03 PM Revision c3fab051 (cdmlib): cleanup and adapt loglevel for FIELD_SCORE warning
Andreas Müller
03:58 PM feature request #8503: Create abstract base UI from RegistrationUI and use it for all UIs
migration of existing UIs:
* DistributionStatusUI URGENT: this UI is already based on the UI interface only
* Sta...
Andreas Kohlbecker
03:57 PM feature request #8503 (Closed): Create abstract base UI from RegistrationUI and use it for all UIs
Andreas Kohlbecker
03:55 PM feature request #8503 (Resolved): Create abstract base UI from RegistrationUI and use it for all UIs
Applied in changeset commit:cdm-vaadin|4f8aab68e114332f01013b52b7e4f1d17a6582e8. Andreas Kohlbecker
03:57 PM feature request #9860 (New): base all UIs on the AbstractUI

* DistributionStatusUI **URGENT**: this UI is already based on the UI interface only
* StatusEditorUI: still ba...
Andreas Kohlbecker
03:55 PM Revision 9f1ff9bc (cdm-vaadin): ref #6161 adding VaadinServletUtilities class
Andreas Kohlbecker
03:54 PM Revision 4f8aab68 (cdm-vaadin): fix #8503 abstract base UI created
Andreas Kohlbecker
03:48 PM Revision ca6a3e36 (cdmlib): fix testMakeTaxonNodeAHeterotypicSynonymOfAnotherTaxonNode by handling result differently
Andreas Müller
03:47 PM Revision ebba5bdb (cdmlib): cleanup
Andreas Müller
02:50 PM Revision 817bfafd (cdmlib): ref #9843 add combined insertedAndUpdated method to UpdateResult
Andreas Müller
02:46 PM Revision 7e20ab61 (cdmlib): ref #9843 use UUIDs for UpdateResult in aggregation
Andreas Müller
02:19 PM Revision 1438233c (cdmlib): cleanup
Andreas Müller
02:17 PM Revision 04dfb5d2 (cdmlib): revert renaming of io.xml/defaultIoApplicationContext.xml
Andreas Müller
01:58 PM Revision 06a712cc (cdmlib): Revert "minor"
This reverts commit d40724ee19feec1b8bf9e15dea2a4b030b12c8b2. Katja Luther
01:51 PM Revision d40724ee (cdmlib): minor
Katja Luther
01:46 PM Revision e9d64907 (cdmlib): ref #6161 PasswordReset message templates in separate class - 2.
Andreas Kohlbecker
12:59 PM Revision cac8806b (cdm-vaadin): ref #8503 creating abstract base UI class
Andreas Kohlbecker
11:24 AM feature request #9859 (Closed): Password Recovery UI
implement a separate UI for Password Recovery Andreas Kohlbecker
11:22 AM Revision a7e076e4 (cdm-vaadin): ref #9498 using PasswordResetService for Password Recover tab
Andreas Kohlbecker
11:21 AM feature request #9498 (In Progress): Password Recovery, Registration and Login Dialog Tab fully functional
reusing ticket instead of closing as duplicate Andreas Kohlbecker
11:17 AM Revision 32bbd425 (cdmlib): PasswordReset message templates in separate class
Andreas Kohlbecker
11:01 AM Revision 5606f290 (cdmlib): cleanup and improved UpdateResult.toString
Andreas Müller
11:01 AM Revision 83a759a0 (cdmlib): ref #9858 fix handling of related objects in DeleteResult.include()
Andreas Müller
10:54 AM Revision d39bd5fd (cdmlib): ref #6161 PasswordResetService in CdmRepository & better execption handling
Andreas Kohlbecker

11/10/2021

10:45 PM feature request #9858 (Resolved): Add update result to aggregation algorithms
Applied in changeset commit:cdmlib|4d8fec305c68624239caca8185d587fa62efd824. Andreas Müller
09:04 PM feature request #9858: Add update result to aggregation algorithms
AM:
... und habe bereits das UpdateResult in ein DeleteResult umgestellt, damit ggf. gelöschte Descriptions erfass...
Andreas Müller
10:45 PM Revision 31b6fd3a (cdmlib): minor
Andreas Müller
10:45 PM Revision 4d8fec30 (cdmlib): fix #9858 add updatedObjects to aggregation result for aggregated descriptions
Andreas Müller
10:45 PM Revision 463a8a35 (cdmlib): cleanup
Andreas Müller
10:45 PM Revision 7bf6b5a7 (cdmlib): cleanup
Andreas Müller
10:45 PM Revision 42648459 (cdmlib): ref #8871 further unify aggregation classes and add ref #9858 some update result functionality
Andreas Müller
10:45 PM Revision 154a4700 (cdmlib): cleanup
Andreas Müller
10:45 PM Revision 38d61910 (cdmlib): add factory methods for CdmEntityIdentifier and use it in UpdateResult
Andreas Müller
10:44 PM Revision 479c7ac8 (cdmlib): add status to distribution toString and remove space in statedata toString
Andreas Müller
02:10 PM Revision 6b48abc9 (taxeditor): ref #9851: minor
Katja Luther
01:54 PM feature request #6161 (Resolved): Service and webservice to recover forgotten passwords
Andreas Kohlbecker
01:53 PM Revision 3ba8fefd (cdmlib): ref #6161 testing for error conditions, timeouts and making ratelimitor configurable
Andreas Kohlbecker
01:15 PM Revision 4394f4a4 (taxeditor): ref #9851: add org.eclipse.core.net
Katja Luther
01:06 PM Revision f1620324 (taxeditor): ref #9851: set proxy
Katja Luther
10:06 AM bug #9851: Problems during search for updates when network delay is too big
Andreas Kohlbecker wrote:
> another option to simulate the situation would be to establish a ssl SOCKS proxy to a se...
Andreas Kohlbecker
10:04 AM feature request #8822 (Worksforme): Handle exceptions caused by sortinex problems in cdm light export
In the meanwhile the message mentioned the taxon node. I think this is ok. Katja Luther
09:41 AM bug #9857: TitleCache field of collector in specimen dialog should show collector title
This should be fixed, also fixed in field unit details view.
Please review.
Katja Luther
09:40 AM bug #9857 (Resolved): TitleCache field of collector in specimen dialog should show collector title
Applied in changeset commit:taxeditor|3cbd91d4793b62425eaf1dad93f07167687f981d. Katja Luther
09:40 AM Revision 3cbd91d4 (taxeditor): fix #9857: collector field should show collector title
Katja Luther

11/09/2021

05:50 PM Revision 950c7b33 (cdmlib): javadoc
Andreas Müller
05:50 PM Revision 9ce05b21 (cdmlib): ref #9858 change aggregation result from UpdateResult to DeleteResult
Andreas Müller
05:50 PM Revision feb31341 (cdmlib): cleanup and javadoc
Andreas Müller
05:50 PM Revision b81ccc04 (cdmlib): ref #9858 adapt DeleteResult and UpdateResult to use common include method and add parameter to exclude exceptions and status from inclusion
Andreas Müller
05:50 PM Revision e244a4ff (cdmlib): cleanup
Andreas Müller
03:32 PM Revision b3c1efd7 (cdmlib): ref #6161 time oput test
Andreas Kohlbecker
02:41 PM Revision e121d84a (cdmlib): ref #6161 better exception handling
Andreas Kohlbecker
01:54 PM Revision 93f25a6b (cdmlib): ref #6161 implementing password recovery service & tests
Andreas Kohlbecker
01:54 PM Revision e185587b (cdmlib): avoiding confusion with 001-cdm.h2.sql and it's tmeplate for humans and IDEs
Andreas Kohlbecker
12:11 PM feature request #9839 (Feedback): Show distanceToGround on the occurrence page
For distance to water surface and distance to substrate to become visible in the FieldUnit title cache the correspond... Andreas Kohlbecker
12:07 PM feature request #9839: Show distanceToGround on the occurrence page
The FieldUnit details are visible here: https://www.phycobank.org/cdm_dataportal/occurrence/ce3b36d8-6c6a-44b0-84dd-1... Andreas Kohlbecker
11:42 AM bug #9851: Problems during search for updates when network delay is too big
Whith no internet connection the message is the same "no updates available", but the log contains an exception.
~~...
Katja Luther
10:05 AM feature request #9858 (Closed): Add update result to aggregation algorithms
... for now it is enough to have the aggregated descriptions in the update result Andreas Müller
10:01 AM bug #9857 (Closed): TitleCache field of collector in specimen dialog should show collector title
im Dialog für Specimen sollte im Collector Feld der CollectorCache angezeigt werden, nicht der titleCache.
Könntes...
Katja Luther
09:59 AM bug #9856 (Resolved): Cancel of taxon selection in move synonym results in exception
please review Katja Luther
09:54 AM bug #9856 (Closed): Cancel of taxon selection in move synonym results in exception
mail WB:
Hallo,
versucht, ein Synonym (Agrostemma parviflora Cav. ex Steud. in Nomencl. Bot. 19. 1821) zu verschi...
Katja Luther

11/08/2021

06:51 PM Revision 7812d3b5 (cdmlib): add empty controller again for TaxEditor remoting controller
Andreas Müller
05:19 PM Revision cebddcf1 (cdmlib): cleanup TaxonNodeDto constructor
Andreas Müller
05:12 PM bug #9855: Specimen images sometimes show duplicates
AK can you please review if the result is as expected.
KL can you please review the fix for ABCD.
Andreas Müller
05:11 PM bug #9855: Specimen images sometimes show duplicates
The reason for the duplicates was that in TaxonServiceImpl.listMedia() media were not deduplicate if e.g. an image of... Andreas Müller
04:59 PM bug #9855 (Resolved): Specimen images sometimes show duplicates
Applied in changeset commit:cdmlib|75539fa3b6e75f1972f2c3e3f90a3b395ea9d356. Andreas Müller
11:41 AM bug #9855: Specimen images sometimes show duplicates
Andreas Müller wrote:
> Duplication only happens in UniversalViewer (using the ManifestController.doTaxonMedia()) co...
Andreas Kohlbecker
11:18 AM bug #9855 (In Progress): Specimen images sometimes show duplicates
Duplication only happens in UniversalViewer (using the ManifestController.doTaxonMedia()) code. Switching to simple v... Andreas Müller
11:02 AM bug #9855: Specimen images sometimes show duplicates
AK:
eu.etaxonomy.cdm.remote.controller.iiif.ManifestController.doTaxonMedia()
Andreas Müller
10:07 AM bug #9855 (Closed): Specimen images sometimes show duplicates
e.g. https://campanula.e-taxonomy.net/cdm_dataportal/taxon/cdcacbda-11c0-4cb8-a2e0-8d7abc5ae756/images
Andreas Müller
05:07 PM Revision fb09cec0 (cdmlib): make commandline debugging available in cdmlib-remote
Andreas Müller
04:58 PM Revision c61b7547 (cdmlib): ref #9855 remove image duplicates for MediaSpecimen in ABCD import
Andreas Müller
04:58 PM Revision ece0f9f5 (cdmlib): fix #9855 deduplicate images in TaxonServiceImpl.listMedia()
Andreas Müller
04:56 PM Revision 3eed28dc (cdmlib): Revert "rename getMediainHierarchy to getMediaInHierarchy"
This reverts commit 10a9a8cd7811b77de3d877298448c650a3e117e4. Andreas Müller
04:50 PM Revision 10a9a8cd (cdmlib): rename getMediainHierarchy to getMediaInHierarchy
Andreas Müller
04:49 PM Revision 75539fa3 (cdmlib): fix #9855 fix duplicated images
Andreas Müller
04:35 PM Revision 41502854 (cdmlib): cleanup
Andreas Müller
03:27 PM bug #9843 (Feedback): When adding new descriptions it should not be necessary to load the complete matrix
Therefore it is necessary that the aggregation result contains the uuids of the newly created or updated descriptions... Katja Luther
02:25 PM Revision 0ba13d6d (taxeditor): avoid NPE
Katja Luther
12:03 PM bug #9800 (In Progress): Open issues for character matrix
Open in menu is added. Katja Luther
12:02 PM Revision a4461831 (taxeditor): ref #9800: add open in menu to character matrix
Katja Luther
10:54 AM Revision 669bb68e (cdmlib): simplify and javadoc for TaxonNodeDto constructor
Andreas Müller
10:40 AM task #6841: [DISCUSS] Correct use of MediaSpecimen and derivates
WGB:
Ich finde die Behandlung von eindeutig auf eine Unit bezogenen Fotos (oder anderen Medien) als Derived Unit v...
Andreas Müller
10:19 AM bug #9851: Problems during search for updates when network delay is too big
Andreas Müller wrote:
> Katja Luther wrote:
> > The checkForUpdates method shows "No updates available" only if ope...
Katja Luther
10:18 AM bug #9851: Problems during search for updates when network delay is too big
Katja Luther wrote:
> The checkForUpdates method shows "No updates available" only if operation.resolveModal(monitor...
Andreas Müller
09:41 AM Revision 70a3ae7c (taxeditor): ref #9851: change log level
Katja Luther

11/05/2021

01:42 PM bug #9851: Problems during search for updates when network delay is too big
another option to simulate the situation would be to establish a ssl SOCKS proxy to a server in mexico and to pipe al... Andreas Kohlbecker
12:36 PM bug #9854 (Resolved): In ABCD import type designations should not be added to all names of a homotypic group
Katja Luther
12:35 PM bug #9854 (Closed): In ABCD import type designations should not be added to all names of a homotypic group
The addTypeDesignation() method is used with the parameter addToAllNames = true, but it should be false. Katja Luther
12:25 PM feature request #9853 (New): [DISCUSS] Integrate collecting areas into fieldUnit/derivedUnit titleCache (or citation)
Currently collecting areas beside countries are not integrated into the citation string (titleCache) for specimens/fi... Andreas Müller
11:53 AM Revision f51e2b7c (cdmlib): add typedesignation only to designated name
Katja Luther
11:07 AM bug #6207 (Resolved): Import Salvador images
WGB:
durch die Footnote wird die Quellenangabe im Titel eigentlich überflüssig, finde ich auch...
===
AM (20...
Andreas Müller
10:47 AM task #9852 (New): Use rulebased creation of thumbnail links for Salvador images
Currently salvador images are stored as full images and thumbnails on the media fileserver.
We could use the rulebas...
Andreas Müller
10:16 AM task #6252 (Closed): Implement image import for salvador
This seems to be fully imported. Further discussion on image handling in #6207. Andreas Müller
09:27 AM Revision 1a894cf4 (taxeditor): add logger to UpdateHandler
Katja Luther

11/04/2021

03:37 PM bug #9851 (In Progress): Problems during search for updates when network delay is too big
The checkForUpdates method shows "No updates available" only if operation.resolveModal(monitor) gives back Status.STA... Katja Luther
01:56 PM bug #9851 (In Progress): Problems during search for updates when network delay is too big
Users from mexico does not get the correct informations about new updates, maybe this is because the response needs t... Katja Luther
01:32 PM bug #9850 (New): Discussion and implementation how to expand the tree
Actually the character matrix can only be collapsed and opened but we also need the possibility to open only a subtre... Katja Luther
12:28 PM bug #7342 (Resolved): incomplete bean initialization with specific data causes LIEs
As I can't reproduce any of the LIEs anymore I suggest to close this ticket as worksforme (and remove target version)... Andreas Müller
12:26 PM Revision c155ce7d (cdmlib): ref #7342 add statusNote to taxonNodes init strategy (just in case as locally I got NPE)
Andreas Müller
12:14 PM Revision 3ac9988f (cdmlib): cleanup
Andreas Müller
12:06 PM Revision e9e99357 (cdm-vaadin): fix #9849 adapt test data in vaadin
Andreas Müller
11:33 AM task #9849: Remove trailing full stops from specimen titleCaches
@AK: This is fixed now but maybe we still need to adapt tests in dataportal. Andreas Müller
11:28 AM task #9849 (Resolved): Remove trailing full stops from specimen titleCaches
Applied in changeset commit:cdmlib|837670bb6622f49a3ca2d2bf6baabdbdf723df53. Andreas Müller
10:24 AM task #9849 (Closed): Remove trailing full stops from specimen titleCaches
As decided e.g. in #9788 we should not add trailing dots to titleCaches. If they are needed/wanted by publications th... Andreas Müller
11:28 AM Revision 837670bb (cdmlib): fix #9849 further adapt test data
Andreas Müller
11:18 AM Revision dec4ce63 (cdmlib): cleanup
Andreas Müller
11:16 AM Revision 7d0a4ffe (cdmlib): ref #6865 remove some javadoc
Andreas Müller
11:15 AM Revision d973bbb0 (cdmlib): ref #9849 remove trailing dot from FieldUnitDefaultCacheStrategy
Andreas Müller
11:11 AM Revision 7d08e9ac (cdmlib): ref #9849 remove trailing dot from DerivedUnitDefaultCacheStrategy
Andreas Müller
10:53 AM bug #7183: Creating a new reference in bulk editor the focus is not set to the newly created entity
As this is back to "In Progress" I set it to current milestone. Andreas Müller
10:04 AM bug #7183 (In Progress): Creating a new reference in bulk editor the focus is not set to the newly created entity
Andreas Müller wrote:
> Katja Luther wrote:
> > now the selected item is not blue, but with a grey box around it to...
Katja Luther
10:29 AM feature request #6865 (Resolved): [DISCUSS] Separator for Code and Accession Number
Applied in changeset commit:cdmlib|dbcf8d32533ad6132d3ef2d976cdcfe5761f8969. Andreas Müller
10:29 AM Revision 06a4005c (cdmlib): ref #6865 fix test for DerivedUnitDefaultCacheStrategy formatting (cont.)
Andreas Müller
10:14 AM Revision bd4dde76 (cdmlib): ref #6865 fix test for DerivedUnitDefaultCacheStrategy formatting
Andreas Müller
10:11 AM Revision 5656b567 (cdmlib): some refactoring for NonReferencedObjectsDeleter
Andreas Müller
10:11 AM Revision dbcf8d32 (cdmlib): fix #6865 add colon seperator for collection code <-> number and add factory methods for DerivedUnitDefaultCacheStrategy
Andreas Müller
09:29 AM bug #6298: Add delete button for areas for common names and for person in user
Andreas Müller wrote:
> I guess this can be done fast - and is really needed
hmm, maybe not so much needed for di...
Andreas Müller
09:26 AM bug #6298: Add delete button for areas for common names and for person in user
I guess this can be done fast - and is really needed Andreas Müller

11/03/2021

11:26 PM feature request #6874: Find better maps for salvador
WGB (2017-07-21):
Nochmal die Area-Karte: die Umrisse der Dept. und des Landes stimmen nicht ganz überein (auffäl...
Andreas Müller
11:23 PM feature request #9848 (New): Alternativ output string for specimen duplicates in specimen table view
WGB:
mir wäre ein konkatenierter Output lieber, nach dem Muster:
Duplicates: B, barcode: B 10 0031037, preferred ...
Andreas Müller
11:18 PM bug #9847 (New): Specimen table view citation must not include collection information
e.g. on http://portal.cybertaxonomy.org/salvador/cdm_dataportal/taxon/98924180-7c12-453d-bcfc-f6f211b684e1/specimens ... Andreas Müller
10:01 PM Revision 0f56664f (cdmlib): remove seperate config package for NonReferencedObjectsDeleterConfigurator
Andreas Müller
09:55 PM Revision ca7fb73a (cdmlib-apps): ref #9798 fix check handling in MexicoSpanishCountriesActivator
Andreas Müller
09:53 PM Revision 36dfc014 (cdmlib-apps): adapt app-import to new identifier methods
Andreas Müller
09:52 PM Revision 4a5c4812 (cdmlib-apps): add DianthusIdentifierActivator
Andreas Müller
07:29 PM Revision 1207266e (cdmlib): ref #9772 , ref #9842 cleanup rowwrapper test
Andreas Müller
07:25 PM Revision d42f5dbb (cdmlib): cleanup
Andreas Müller
05:45 PM bug #4821 (Closed): Changing order of terms not possible
Can be closed. Andreas Müller
05:29 PM bug #5676: Sensu does not show up if no author exists for secundum reference
Andreas Müller wrote:
> The only open question is "Also I wonder if it is wanted behavior, that the publication date...
Andreas Müller
05:16 PM bug #6119 (Closed): Implement uuidAndTitleCache remote services
The above links work both so I guess we can close this ticket. Andreas Müller
04:19 PM bug #6119: Implement uuidAndTitleCache remote services
http://test.e-taxonomy.eu/cdmserver/euromed/taxon/uuidAndTitleCache.json?limit=10&pattern=Abies%25&class=Taxon works... Andreas Müller
04:17 PM bug #6119: Implement uuidAndTitleCache remote services
A test could be http://test.e-taxonomy.eu/cdmserver/euromed/taxon/uuidAndTitleCache.json?limit=10&pattern=Abies%25 Andreas Müller
04:56 PM bug #9772 (Closed): Improve DTO usage for character matrix
There are a couple of open issues (most important probably the loading which uses still model objects and therefore i... Andreas Müller
04:29 PM Revision e5e42d33 (cdm-server): Merge branch 'release/5.28.0' into develop
jenkins
04:29 PM Revision 0610a0fd (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
04:28 PM feature request #5474 (Closed): TermEditor menu should be more structured
The term menu is handled differently in the meanwhile anyway so I think we can close this ticket without having to ch... Andreas Müller
04:28 PM Revision 905735fb (cdm-server): updating poms for branch'release/5.28.0' with non-snapshot versions
jenkins
04:12 PM Revision d3cf0760 (cdmlib): ref #5676 fix NPE when clazz is not passed as paramter to getUuidAndTitleCache()
Andreas Müller
04:09 PM Revision 809b00e8 (cdm-webapp): Merge branch 'release/5.28.0' into develop
jenkins
04:09 PM Revision bd81a7f9 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
04:09 PM Revision a98ebcdf (cdm-webapp): updating poms for branch'release/5.28.0' with non-snapshot versions
jenkins
04:08 PM Revision e59fc922 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.28.0
jenkins
03:38 PM bug #6105 (Closed): Make CdmPreferences editable in separate view
Andreas Müller
03:31 PM Revision 8cae542d (cdm-vaadin): Merge branch 'release/5.28.0' into develop
jenkins
03:31 PM Revision 5e2d866c (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
03:29 PM Revision 97896da2 (cdm-dataportal): Merge branch 'release/5.28.0' into develop
jenkins
03:28 PM Revision d32b2586 (cdm-dataportal): updating poms for branch'release/5.28.0' with non-snapshot versions
jenkins
03:28 PM Revision 5803c151 (cdm-dataportal): release-preparation: production level css
jenkins
03:28 PM Revision 43c5a778 (taxeditor): Merge branch 'release/5.28.0' into develop
jenkins
03:28 PM Revision c5527b35 (taxeditor): Merge branch 'release/5.28.0'
jenkins
03:27 PM Revision 9b3e1a77 (cdm-vaadin): updating poms for branch'release/5.28.0' with non-snapshot versions
jenkins
03:27 PM Revision 1acdee26 (cdm-vaadin): jenkins bumping cdmlib.version to 5.28.0
jenkins
03:00 PM feature request #7275: [DISCUSS] Require email address for Users
in #7276#note-11 we decided for the strategy to adding default dummy-email addresses to replace null values. Andreas Kohlbecker
02:55 PM feature request #7275: [DISCUSS] Require email address for Users
i am removing the last comment as this was misplaced here. This comment is a duplicate of #7276#note-11 Andreas Kohlbecker
02:45 PM Revision 2ea48187 (cdmlib): Updating develop poms back to pre merge state
jenkins
02:45 PM Revision c6987df1 (cdmlib): Merge branch 'master' into develop
jenkins
02:45 PM Revision ea68116e (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
02:45 PM Revision b6c327d7 (cdmlib): Merge branch 'release/5.28.0'
jenkins
02:34 PM bug #6480 (Closed): Re-saved by cascade in specimen bulk editor
Katja Luther
02:32 PM bug #6480: Re-saved by cascade in specimen bulk editor
Andreas Müller wrote:
> There is a problem with the message displayed in Confirm Deletion dialog. Looks like i18n do...
Katja Luther
02:33 PM bug #9846 (New): Improve delete configuration in specimen list editor
copied from #6480:
adapt labels:
* "Delete Children" => "Delete **c**hildren", to be consistent
* Delete from ...
Katja Luther
02:24 PM bug #6299 (Closed): Error when deleting reference in bulk editor
As we never got this exception anymore, we can close this ticket. Katja Luther
02:23 PM Revision 2e843cf9 (cdmlib): updating poms for branch'release/5.28.0' with non-snapshot versions
jenkins
02:19 PM bug #6220 (Closed): Improve definition of orphaned taxon and synonym
Andreas Müller wrote:
> Katja, can you please extract the open issues to a new ticket and close this one?
created...
Katja Luther
02:19 PM bug #9845 (New): Find a solution to keep "isOrphaned" in sync (java based and hql based)
copied from #6220:
This is what I expected. So the critical question is here, how we can keep the java based defin...
Katja Luther
02:00 PM Revision 80e02d36 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.28.0-SNAPSHOT
jenkins
02:00 PM Revision dd882427 (cdm-webapp): updating poms for 5.29.0-SNAPSHOT development
jenkins
02:00 PM Revision d96f73f8 (cdm-webapp): updating poms for 5.28.0 branch with snapshot versions
jenkins
02:00 PM Revision 83ec09a2 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.29.0-SNAPSHOT
jenkins
01:59 PM Revision 7e1047c1 (cdm-server): updating poms for 5.29.0-SNAPSHOT development
jenkins
01:59 PM Revision 49667e09 (taxeditor): Updated version in pom / project files to taxeditor version : 5.29.0-SNAPSHOT and cdmlib version : 5.29.0-SNAPSHOT
jenkins
01:59 PM Revision 12e620bc (taxeditor): Updated version in pom / project files to taxeditor version : 5.28.0 and cdmlib version : 5.28.0
jenkins
01:58 PM Revision ace1ee59 (cdm-vaadin): jenkins bumping cdmlib.version to 5.28.0-SNAPSHOT
jenkins
01:58 PM Revision e2c2e9fa (cdm-dataportal): updating poms for 5.29.0-SNAPSHOT development
jenkins
01:58 PM Revision fc696dd8 (cdm-vaadin): updating poms for 5.29.0-SNAPSHOT development
jenkins
01:58 PM Revision 7276d7de (cdm-vaadin): updating poms for 5.28.0 branch with snapshot versions
jenkins
01:58 PM Revision f8fb8bbd (cdm-vaadin): jenkins bumping cdmlib.version to 5.29.0-SNAPSHOT
jenkins
01:54 PM Revision 4767bb1e (cdmlib): updating poms for 5.29.0-SNAPSHOT development
jenkins
01:50 PM bug #9825 (Closed): Selection wizards for areas in mulitlanguage instances show every vocabulary twice
I tested on rem_conf_am and everything seems to work as expected. Andreas Müller
12:11 PM bug #9825: Selection wizards for areas in mulitlanguage instances show every vocabulary twice
Should be solved now. Can you please review? Andreas Müller
12:10 PM bug #9825 (Resolved): Selection wizards for areas in mulitlanguage instances show every vocabulary twice
Applied in changeset commit:cdmlib|e3538034fba60c336b797d1ba58fbca89db817f8. Andreas Müller
11:13 AM bug #9825 (Feedback): Selection wizards for areas in mulitlanguage instances show every vocabulary twice
Andreas Müller wrote:
> The method used is a DTO method VocabularyService.findVocabularyDtoByTermType() or finally o...
Katja Luther
01:47 PM feature request #9836 (Closed): Make nameUsedInSource available for secundum references
This works now. Andreas Müller
12:39 PM feature request #9836: Make nameUsedInSource available for secundum references
Andreas Müller wrote:
> Currently it also does not show up for accepted taxa. This needs to be fixed before release....
Katja Luther
12:29 PM feature request #9836 (Feedback): Make nameUsedInSource available for secundum references
Currently it also does not show up for accepted taxa. This needs to be fixed before release. Andreas Müller
12:03 PM feature request #9836 (Resolved): Make nameUsedInSource available for secundum references
Can this be closed? Katja Luther
12:37 PM Revision bd8cded2 (taxeditor): ref #9836: fix problem of missing name in source
Katja Luther
12:25 PM bug #9838 (Closed): Loading of details of categorical and quantitative data takes very long
I think we can close this ticket.
Loading categorical data facts is much faster now and only a view objects are lo...
Andreas Müller
12:15 PM bug #9816 (Closed): Implement correct handling of more than one element for a character
Works as expected. Andreas Müller
12:04 PM bug #9816 (Resolved): Implement correct handling of more than one element for a character
Please do short review whether we can close this ticket. Katja Luther
11:25 AM bug #9816: Implement correct handling of more than one element for a character
KL:
die schnelle Lösung wäre, dass einfach alle Daten, auch doppelte angezeigt werden
Andreas Müller
12:10 PM Revision e3538034 (cdmlib): fix #9825 implement deduplication for list(Set) methods in term and vocabulary services
Andreas Müller
12:10 PM Revision 7b64453a (cdmlib): cleanup
Andreas Müller
12:08 PM bug #9844 (New): Add preference for disabling cloned descriptions
copied from #9806:
Descriptions Clones, die an Specimens oder auch Taxa hängen sind derzeit noch normal bearbeitba...
Katja Luther
12:04 PM bug #9806 (Closed): Clones should not be editable in factual data view and elsewhere
Andreas Müller wrote:
> This has been partly implemented in 5.28 I think. We should either split the ticket or imple...
Katja Luther
12:04 PM bug #9834 (Closed): Cannot create a nomenclatural standard abbreviation in the Reference author team
Bug fixed, ticket closed THANKS! Wolf-Henning Kusber
12:02 PM bug #9807 (Closed): Matrix should not collapse after aggregation
Katja Luther
12:02 PM bug #9807: Matrix should not collapse after aggregation
Create a new ticket, because the original problem is solved but a nicer solution should be implemented.(#9843) Katja Luther
12:01 PM bug #9843 (Closed): When adding new descriptions it should not be necessary to load the complete matrix
copied from #9807:
The current solution solves that the matrix is completely collapsed which is helpful. However the...
Katja Luther
11:25 AM Revision 8b6867bf (cdm-dataportal): adapting test configuration to https - 2
Andreas Kohlbecker
11:22 AM Revision be6ae017 (cdm-dataportal): adapting test configuration to https
Andreas Kohlbecker
11:16 AM bug #5863 (Worksforme): Specimen tab condensed table does not show Collection for single collection
Andreas Kohlbecker
10:31 AM Revision e551d0b2 (taxeditor): ref #9805: adapt labels
Katja Luther
09:50 AM Revision 01ec16e7 (cdmlib): revert out comment code
Katja Luther

11/02/2021

11:10 PM Revision 5024f433 (cdmlib): javadoc and minor
Andreas Müller
11:09 PM Revision 1774e407 (cdmlib): ref #9804 improve handling for empty categorical data (empty or null value state data) (cont.)
Andreas Müller
11:07 PM Revision 9b8a8049 (cdmlib): ref #9804 improve handling for empty categorical data (empty or null value state data)
Andreas Müller
11:00 PM bug #9834: Cannot create a nomenclatural standard abbreviation in the Reference author team
Andreas Kohlbecker wrote:
> please review
... and change the ticket subject to "Cannot create a nomenclatural s...
Andreas Kohlbecker
04:28 PM bug #9834: Cannot create a nomenclatural standard abbreviation in the Reference author team
please review Andreas Kohlbecker
04:02 PM bug #9834 (Resolved): Cannot create a nomenclatural standard abbreviation in the Reference author team
Applied in changeset commit:cdm-vaadin|ea112e7e945ad66460e4cdf9570f00597ed220c5. Andreas Kohlbecker
02:39 PM bug #9834: Cannot create a nomenclatural standard abbreviation in the Reference author team
see ![](picture338-1.png) Andreas Kohlbecker
02:37 PM bug #9834: Cannot create a nomenclatural standard abbreviation in the Reference author team
> Cannot create a nomenclatural standard abbreviation in the Reference author team.
Also das ist das Problem? Auto...
Andreas Kohlbecker
02:14 PM bug #9834: Cannot create a nomenclatural standard abbreviation in the Reference author team
Henning:
Um ein konkretes Beispiel zu haben in 100970 (paper Takano et al. 2014) gibt es einen bibliographischen ...
Andreas Kohlbecker
12:13 PM bug #9834: Cannot create a nomenclatural standard abbreviation in the Reference author team
Same problem in the Test system
I added in the test system a "test" name with the respective author, who cannot be...
Wolf-Henning Kusber
10:50 AM bug #9834: Cannot create a nomenclatural standard abbreviation in the Reference author team
> Cannot create a nomenclatural standard abbreviation in the Reference author team.
Also das ist das Problem? Auto...
Wolf-Henning Kusber
06:44 PM Revision f8b73f93 (cdmlib): cleanup
Andreas Müller
06:33 PM bug #9825: Selection wizards for areas in mulitlanguage instances show every vocabulary twice
The method used is a DTO method VocabularyService.findVocabularyDtoByTermType() or finally on DTO level TermVocabular... Andreas Müller
12:09 PM bug #9825 (In Progress): Selection wizards for areas in mulitlanguage instances show every vocabulary twice
First implementation with commit:d955087e . However, it may not yet work due to generics (the current DefinedTermDaoI... Andreas Müller
06:28 PM Revision 259c70d2 (cdmlib): ref #9825 fix failing vocDto test
Andreas Müller
06:20 PM Revision 64c991e6 (cdmlib): add javadoc and cleanup
Andreas Müller
05:27 PM Revision dd1494d6 (cdmlib): add schema updater for next schema update
Andreas Müller
05:18 PM task #9837 (In Progress): updadte vaadin to latets 7.* version
Andreas Kohlbecker
05:17 PM bug #9831 (Closed): Exception in TermRepresentationUpdater if term does not exist
definitely fixed, can be closed Andreas Kohlbecker
04:02 PM Revision ea112e7e (cdm-vaadin): fix #9834 adding lost nomenclaturalTitleButton again & removing debug code modification
Andreas Kohlbecker
04:01 PM Revision 4eccb67a (cdmlib): ref #9825 revert "failing" deduplication and add test showing that deduplication works on dao level
Andreas Müller
03:59 PM Revision 368ed797 (cdmlib): cleanup
Andreas Müller
03:55 PM Revision 58bc40a9 (cdm-vaadin): improving spacing of team and person fiels elements
Andreas Kohlbecker
02:54 PM bug #4821: Changing order of terms not possible
please review Katja Luther
02:32 PM Revision be9359f3 (taxeditor): ref #9838: change order of ui element creation and setting entity in collection elements - continue
Katja Luther
01:47 PM Revision 6d9a00e0 (taxeditor): ref #9821: disable sources for computed and cloned descriptions - continue
Katja Luther
01:14 PM feature request #9836: Make nameUsedInSource available for secundum references
Andreas Müller wrote:
> @Katja, can you remove the nameUsedInSource for synonyms then?
this is already implemente...
Katja Luther
01:12 PM feature request #9836: Make nameUsedInSource available for secundum references
@Katja, can you remove the nameUsedInSource for synonyms then? Andreas Müller
11:41 AM feature request #9836: Make nameUsedInSource available for secundum references
mail NaK:
nach meiner Erfahrung bisher ist das name in source vor allem wichtig wenn das Taxon in der sec. Refer...
Katja Luther
09:34 AM feature request #9836: Make nameUsedInSource available for secundum references
AM:
... ich wollte allerdings gerne nochmal klären, ob wir bei der Semantik des Feldes übereinstimmen.
Aus meiner S...
Andreas Müller
12:11 PM Revision d0198e95 (taxeditor): ref #9821: disable sources for computed and cloned descriptions
Katja Luther
12:06 PM Revision d955087e (cdmlib): ref #9825 try to fix duplicated vocabularies in distribution editor (probably not working yet due to generics)
Andreas Müller
11:47 AM Revision c585a089 (cdmlib): remove commented code from TermVocabularyDao.findVocabularyDtoByTermTypes(termTypes, pattern, includeSubtypes)
Andreas Müller
11:39 AM bug #9838: Loading of details of categorical and quantitative data takes very long
Tested all collection elements in nightly and could not find any problems. Please have another look and review. Katja Luther
10:22 AM bug #9838 (Resolved): Loading of details of categorical and quantitative data takes very long
Katja Luther wrote:
> The long time loading was produced by a mistake in term manager.
>
> The extreme number of ...
Katja Luther
09:06 AM bug #9838: Loading of details of categorical and quantitative data takes very long
This is at least partly handled in 5.28 as far as I can see. If needed can we split ticket?
How far is it solved?
Andreas Müller
11:39 AM task #9842 (In Progress): Improve performance for loading DDS (RowWrapperDTO)
Since #9772 we mostly use DTOs for the "RowWrapper" retrieval. However, the loading of the DTOs still uses model obje... Andreas Müller
11:27 AM bug #9813: Details view should be available for literature (and default) descriptions in character matrix
This should have high priority Andreas Müller
11:24 AM bug #9807: Matrix should not collapse after aggregation
Andreas Müller wrote:
> The current solution solves that the matrix is completely collapsed which is helpful. Howeve...
Andreas Müller
11:20 AM bug #8243 (In Progress): Cdm Cache uses a lot of disk space
Andreas Müller
11:19 AM bug #8243: Cdm Cache uses a lot of disk space
Katja Luther wrote:
> We should have a look on this with the new implementation because the matrix worked with descr...
Andreas Müller
11:10 AM feature request #9841 (New): Possibility to open only a taxonomic subtree of a matrix
E.g. by having a context menu for the subtree filter in the descriptive dataset editor and/or having an "open in" (wi... Andreas Müller
11:06 AM bug #9806: Clones should not be editable in factual data view and elsewhere
This has been partly implemented in 5.28 I think. We should either split the ticket or implement the second part (con... Andreas Müller
11:03 AM feature request #7675 (Rejected): Make columns with default values togglable
Katja Luther wrote:
> I do not understand the intention of this ticket, if a default value exist no exact values fro...
Andreas Müller
10:45 AM Revision defbfd3c (taxeditor): ref #9836: show name in source only for taxa
Katja Luther
10:28 AM Revision 0415fbc2 (taxeditor): ref #9836: first implementation for own section for secundum source - still not used
Katja Luther
10:20 AM Revision d7ad25d9 (taxeditor): ref #9838: change order of ui element creation and setting entity in collection elements
Katja Luther
09:49 AM Revision e95c1bbd (cdmlib): ref #9816: all data need to be shown in displayString
Katja Luther
08:53 AM bug #9816: Implement correct handling of more than one element for a character
Katja Luther wrote:
>The count is integrated in the description elements and is filled during aggregation, it is not...
Andreas Müller
08:28 AM bug #9816: Implement correct handling of more than one element for a character
Andreas Müller wrote:
> Then the ticket is not correctly implemented as there is yellow 2x in existing as described ...
Katja Luther

11/01/2021

09:32 PM bug #9831: Exception in TermRepresentationUpdater if term does not exist
ahh, good you found this. It is actually not a problem of the update script but of the term loader which was introduc... Andreas Müller
09:31 PM bug #9831 (Resolved): Exception in TermRepresentationUpdater if term does not exist
Applied in changeset commit:cdmlib|43ca311a71a11f78f62f495ee73815fc69f5e0a6. Andreas Müller
01:01 PM bug #9831 (Feedback): Exception in TermRepresentationUpdater if term does not exist
I tested updating of the attached (attachment:cdm_production_caryophyllales_2018-11-16.sql.bz2) database on ws1 and i... Andreas Kohlbecker
11:53 AM bug #9831: Exception in TermRepresentationUpdater if term does not exist
Andreas, can you test this with an old database on WS1. Andreas Müller
09:30 PM Revision f4543616 (cdmlib): cleanup
Andreas Müller
09:30 PM Revision 43ca311a (cdmlib): fix #9831, ref #9477 fix failing term loading for unordered missing terms
Andreas Müller
06:08 PM bug #9834 (Feedback): Cannot create a nomenclatural standard abbreviation in the Reference author team
I cant reproduce the reported problem.
* Did you test this with the test system?
* If yes, could you give some mo...
Andreas Kohlbecker
05:12 PM bug #6978 (Worksforme): NPE in DefaultReferenceCacheStrategy
yes, this is fixed, ticket can be closed Andreas Kohlbecker
04:26 PM Revision a5f3077d (cdm-vaadin): ref #9837 updating vaadin to latest open source version and updating jsoup to fix https://vaadin.com/security/2021-10-27 by our self - commented, due to code incompatibility
Andreas Kohlbecker
03:56 PM bug #9816: Implement correct handling of more than one element for a character
Then the ticket is not correctly implemented as there is yellow 2x in existing as described above. I also cannot beli... Andreas Müller
03:45 PM bug #9816: Implement correct handling of more than one element for a character
Andreas Müller wrote:
> I found an open issue: The literature description of Descripta prima in the test dataset for...
Katja Luther
03:19 PM bug #9816 (Feedback): Implement correct handling of more than one element for a character
I found an open issue: The literature description of Descripta prima in the test dataset for bush color has 1 record ... Andreas Müller
03:38 PM task #9833 (Closed): Remove cascading from descriptive dataset
I intensively tested saving DDS with new ranks, feature trees, subtrees and descriptions and everything seems to work... Andreas Müller
03:30 PM bug #9803 (Closed): Aggregating full dataset does not work
Works as expected Andreas Müller
03:23 PM bug #9807 (Feedback): Matrix should not collapse after aggregation
The current solution solves that the matrix is completely collapsed which is helpful. However the aim is to keep it e... Andreas Müller
03:14 PM task #9837 (Resolved): updadte vaadin to latets 7.* version
Andreas Kohlbecker
03:12 PM task #9837: updadte vaadin to latets 7.* version
instead of updating vaadin itself it should be sufficient to upgrade the vulnerable jsoup dependency Andreas Kohlbecker
02:59 PM task #9837: updadte vaadin to latets 7.* version
updating any component to the latest vaadin 7 release requires the pro license:
Vaadin 7.7.17 was the last public ...
Andreas Kohlbecker
12:46 PM task #9837 (In Progress): updadte vaadin to latets 7.* version
due to https://vaadin.com/security/2021-10-27 we needed to update vaadin.server quickly.
Updating of vaadin-client...
Andreas Kohlbecker
03:14 PM Revision 6ad3a403 (cdm-vaadin): ref #9837 updating vaadin to latest open source version and updating jsoup to fix https://vaadin.com/security/2021-10-27 by our self
Andreas Kohlbecker
01:42 PM feature request #9840 (Duplicate): Add the possibility to enter new server
We need a possibility to enter new servers into the json file, therefore it should be possible to add a new server fr... Katja Luther
01:09 PM bug #9838: Loading of details of categorical and quantitative data takes very long
The long time loading was produced by a mistake in term manager.
The extreme number of loaded objects is caused by...
Katja Luther
01:06 PM bug #9838 (Closed): Loading of details of categorical and quantitative data takes very long
The loading of the details view of categorical data or quantitative data takes really long and the loaded objects in ... Katja Luther
01:08 PM feature request #9839 (New): Show distanceToGround on the occurrence page
Currently, only "alt." is displayed.
PhycoBank enables the following parameter:
Distance to water surface (= wa...
Wolf-Henning Kusber
12:47 PM Revision d5673a19 (cdm-vaadin): ref #9837 updating vaadin-server
Andreas Kohlbecker
09:28 AM feature request #9836: Make nameUsedInSource available for secundum references
Andreas Müller wrote:
> We should also think about improved structuring for the preference page of the name/taxon de...
Katja Luther
09:18 AM feature request #9836 (In Progress): Make nameUsedInSource available for secundum references
As a first step the name in Source field was added. We have to decide whether we want to have the own section in this... Katja Luther
09:16 AM Revision 5a27a3cc (taxeditor): ref #9836: add name in Source for Secundum source
Katja Luther
 

Also available in: Atom