Activity
From 09/27/2021 to 10/26/2021
10/26/2021
- 11:52 PM bug #6098: Improve session handling for TaxonNavigator and newTaxonNodeWizard
- Is this still an open issue?
- 11:46 PM Revision e2bb62a5 (cdmlib): ref #6025 add comment to test dependency
- 11:45 PM Revision 7451ea0f (cdmlib): cleanup
- 11:33 PM bug #9828 (New): Preferred stable URI (and maybe other data) are not shown in specimen table if no field unit exists
- If the specimen is only a derived unit with e.g. all field unit data in protected cache but with a prefered stable UR...
- 10:53 PM bug #5863 (Resolved): Specimen tab condensed table does not show Collection for single collection
- For me this ticket seems to be fixed in the meanwhile. Can you please double check and remove target version/set to w...
- 10:37 PM bug #5517 (Worksforme): Update label for synonym types
- As we do not use synonym relations anymore the relationship type is not shown anymore in the TaxEditor. However, inte...
- 09:59 PM bug #7200 (Resolved): México Distrito Federal spelling and ignore accents in area search
- This seems to be fixed in the meanwhile. At least searching for "Mexico" also returns "México State". Norbert, can yo...
- 05:55 PM bug #7200: México Distrito Federal spelling and ignore accents in area search
- How to implement java side accent insensitive compare or contains is e.g. explained here:
https://stackoverflow.co... - 05:45 PM bug #7200: México Distrito Federal spelling and ignore accents in area search
- Andreas Kohlbecker wrote:
> These types of problems are usually rather a question of the collation being used in the... - 06:37 PM bug #9812 (Closed): Display of scientific name in the list-view of Vaadin
- The bug is fixed, fine (tested in Vaadin Test), closed the ticket.
- 02:28 PM bug #9812: Display of scientific name in the list-view of Vaadin
- @henning, please review
- 11:54 AM bug #9812 (Resolved): Display of scientific name in the list-view of Vaadin
- Applied in changeset commit:cdm-vaadin|0b1a05647fb83bfc590202a8a5d7a844d7605ba5.
- 11:38 AM bug #9812: Display of scientific name in the list-view of Vaadin
- to reproduce search for "Planothidium cryptolanceolatum" in http://api.phycobank.org/phycobank/app/registration#!list...
- 11:21 AM bug #9812: Display of scientific name in the list-view of Vaadin
- see "preparation" 2019/2020/2021, in the Test and Production system.
- 06:01 PM bug #8023: IndexOutOfBoundsException caused by RegistrationWorkingSet.getRegistrationDate()
- Is this still an open issue? If yes please add category and adapt assignee and or target version.
- 05:58 PM bug #7634: Timeout/Performance problems in Taxeditor
- Is this still an open issue?
- 05:40 PM bug #7049 (Worksforme): DB preferences should allow triple state to allow null values for checkboxes
- This is implemented in the meanwhile. Please reopen if you think there is still something missing.
- 05:39 PM bug #7048 (Worksforme): DB preferences allow override needs to be implemented per preference, not per preference page
- I checked again and it is definetely implemented in the meanwhile (at least for DB preferences). Close as worksforme.
- 05:36 PM bug #7048 (Feedback): DB preferences allow override needs to be implemented per preference, not per preference page
- I guess this is fixed in the meanwhile. Can you please double-check?
- 05:32 PM bug #7979: Registration date and time, display
- Andreas Müller wrote:
> Can we adapt milestone or remove it?
??
- 05:28 PM bug #9821 (Closed): Description sources shown for description elements should not be editable
- Works as expected.
- 03:37 PM bug #9821: Description sources shown for description elements should not be editable
- I guess the change of milestone was accidentally
- 03:22 PM bug #9821 (Resolved): Description sources shown for description elements should not be editable
- Katja Luther wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > It works for sources loaded during the s... - 01:43 PM bug #9821: Description sources shown for description elements should not be editable
- Katja Luther wrote:
> Andreas Müller wrote:
> > It works for sources loaded during the session but not yet for sour... - 01:27 PM bug #9821 (In Progress): Description sources shown for description elements should not be editable
- 10:19 AM bug #9821 (Resolved): Description sources shown for description elements should not be editable
- Andreas Müller wrote:
> It works for sources loaded during the session but not yet for sources created during the se... - 04:49 PM Revision cdb9241f (cdmlib): javadoc
- 04:48 PM Revision cb291ebd (cdmlib): ref #9814 fix vocabularyDtos caching
- 04:36 PM bug #9814 (Resolved): Advanced search webservice for area throws NPE (mexico portal)
- I think in general this ticket is fixed as the webservice and TaxEditor do use 2 different methods to initialize the ...
- 04:33 PM bug #9814: Advanced search webservice for area throws NPE (mexico portal)
- Andreas Müller wrote:
> In the mentioned method you iterate over all returned dtos and for each you run a query to r... - 03:52 PM bug #9814: Advanced search webservice for area throws NPE (mexico portal)
- In the mentioned method you iterate over all returned dtos and for each you run a query to retrieve the VocDto. This ...
- 03:41 PM bug #9814: Advanced search webservice for area throws NPE (mexico portal)
- who is now in charge of this ticket?
- 02:49 PM bug #9814: Advanced search webservice for area throws NPE (mexico portal)
- Andreas Kohlbecker wrote:
> 1. I think adding the VocDto to the termDTOs bloats the reponses with a lot of redundant... - 10:49 AM bug #9814 (Feedback): Advanced search webservice for area throws NPE (mexico portal)
- 1. I think adding the VocDto to the termDTOs bloats the reponses with a lot of redundant information. In most cases t...
- 04:31 PM Revision f1f5966b (cdmlib): ref #9814 cache vocabularyDtos when loading termDTOs
- 04:25 PM Revision 440ea14c (cdmlib): cleanup
- 04:25 PM Revision 23230c1f (cdmlib): cleanup and javadoc
- 03:31 PM Revision 40e7c19a (cdmlib): ref #9816: avoid NPE
- 02:40 PM bug #9816 (Resolved): Implement correct handling of more than one element for a character
- The disabling of the fields for two or more elements per feature is implemented.
Actually if one of the fields is ... - 02:03 PM Revision 13866815 (taxeditor): ref #9814: adapt method in editor
- 02:01 PM Revision 4af8adcf (cdmlib): ref #9814: rename findByTitleasDto method to findByTitleAsDtoWithVocDto
- 01:43 PM Revision df3a895a (taxeditor): ref #9821: renderContent needs to overrite
- 01:38 PM bug #9819 (Closed): Rename "Nameeditor" to "Taxon Editor" in menus
- I guess we can close this ticket now.
- 01:38 PM bug #9819: Rename "Nameeditor" to "Taxon Editor" in menus
- Andreas Müller wrote:
> Once this is done we can close the ticket. However, we should think about a new ticket to ad... - 10:43 AM bug #9819: Rename "Nameeditor" to "Taxon Editor" in menus
- Andreas Müller wrote:
> Have you checked partdescriptor.label.2 in eu.etaxonomy.taxeditor.editor/OSGI-INF/l10n/plugi... - 10:25 AM bug #9819 (Feedback): Rename "Nameeditor" to "Taxon Editor" in menus
- Have you checked partdescriptor.label.2 in eu.etaxonomy.taxeditor.editor/OSGI-INF/l10n/plugin_de.properties ? And co...
- 09:41 AM bug #9819 (Resolved): Rename "Nameeditor" to "Taxon Editor" in menus
- Andreas Müller wrote:
> Please check that always both translations are adapted. E.g. there is a change in eu.etaxono... - 01:37 PM task #9827 (New): Rename taxeditor code from name editor to taxon editor
- copied from #9819
However, we should think about a new ticket to adapt also code to the new labels. E.g. command.n... - 01:03 PM Revision e0211b4b (cdmlib): avoid NPE
- 01:01 PM Revision ba131d9b (cdmlib): ref #9816: correct handling of empty quant data
- 12:59 PM Revision 782249c5 (cdmlib): cleanup and javadoc
- 12:59 PM Revision 07b5ae22 (taxeditor): ref #9816: quantitative data editor needs to handle new descr element correctly
- 12:51 PM feature request #8062 (Closed): Make default preferences deletable serverside
- So we finally chose solution 3 (from the ticket description) and had to revert some of the changes made here previous...
- 12:21 PM feature request #8062: Make default preferences deletable serverside
- In later discussions (e.g. related to #8045) we decided that it makes sense to distinguish default values (not existi...
- 12:50 PM task #9826 (New): Move pure TaxEditor predicates back to taxeditor code
- In #8062 with commit 3c2c16c0 we moved taxeditor predicates to cdmlib as we needed to handle default values server si...
- 11:54 AM Revision 0b1a0564 (cdm-vaadin): fix #9812 adding missing blank after non separater tagged text items
- 11:02 AM bug #4721 (Worksforme): RestServices for list methods return error when index is out of range
- works now:
https://int.e-taxonomy.eu/cdmserver/integration_palmae/classification.json?start=1&limit=3
returns... - 10:52 AM bug #9811 (Closed): regression through removal of `TaxonRelationshipBeanProcessor` ?
- confirmed
- 10:51 AM task #3346 (Worksforme): Team.addListenerForTeamMember(Person member) adds idle listener
- The listener now obviously calls `resetCaches()`, so this is fixed.
- 10:42 AM Revision d7f7dcb0 (taxeditor): remove unused labels
- 10:36 AM bug #9817 (Closed): AggregationWizard: Changing the maxRank results in empty minRank
- Ok, so I think we can close this ticket now. Or is there still an open issue?
- 10:25 AM bug #9817: AggregationWizard: Changing the maxRank results in empty minRank
- Andreas Müller wrote:
> The problem itself is fixed now. There is a minor issue left: if a lowest rank is chosen the... - 10:30 AM Revision 1f2126f1 (taxeditor): avoid widget is disposed exception
- 10:25 AM Revision 773fe4f3 (taxeditor): cleanup
- 10:18 AM Revision a9cd0534 (taxeditor): ref #9821: all sources of description should be disabled
- 09:46 AM Revision 139dad7d (taxeditor): ref #9816: adapt matrix to possibility of more than one descr element
- 09:45 AM Revision 2b942f17 (cdmlib): ref #9816: adapt rowWrapperDto to more than one description element
- 09:39 AM Revision 7d4a750b (taxeditor): ref #9819: still some occurences of Namens-Editor, move to taxon editor
- 09:15 AM feature request #9511 (New): Move specimens/individual associations for matrix into same description
- This is still an open issue. Tested with my local installation.
10/25/2021
- 11:36 PM feature request #9511: Move specimens/individual associations for matrix into same description
- ?
- 11:35 PM bug #9817 (Feedback): AggregationWizard: Changing the maxRank results in empty minRank
- 11:35 PM bug #9817: AggregationWizard: Changing the maxRank results in empty minRank
- The problem itself is fixed now. There is a minor issue left: if a lowest rank is chosen the "Highest rank" combo sti...
- 01:42 PM bug #9817: AggregationWizard: Changing the maxRank results in empty minRank
- Tested for Structured DDS test:
* select highest rank "Order", select lowest rank "species"
* select highest rank... - 11:23 PM bug #9281 (Closed): Set basionym not available for heterotypic synonyms after drag & drop
- works as expected
- 01:14 PM bug #9281: Set basionym not available for heterotypic synonyms after drag & drop
- Tested on rem_conf_am:
Created new heterotypic synonym by using right click menu, creating second heterotypic syno... - 11:19 PM bug #9818 (Closed): Sources not visible for disabled DescriptionElements
- works as expected
- 01:33 PM bug #9818: Sources not visible for disabled DescriptionElements
- Tested on rem_conf_am Descripta prima, sources can be expanded but are not editable, so it works as expected.
- 11:14 PM bug #9819 (Feedback): Rename "Nameeditor" to "Taxon Editor" in menus
- Please check that always both translations are adapted. E.g. there is a change in eu.etaxonomy.taxeditor.bulkeditor/O...
- 01:30 PM bug #9819: Rename "Nameeditor" to "Taxon Editor" in menus
- Tested in taxon navigator and bulk editor and open in ... shows "taxon editor"
- 10:57 PM bug #9815 (Closed): When removing all elements of a description, the description disappears from factual data view, but still exist
- works as expected
- 01:47 PM bug #9815: When removing all elements of a description, the description disappears from factual data view, but still exist
- Tested with Descripta prima:
* create a new Factual Data Set and add new distribution
* create another new factua... - 10:55 PM bug #9821 (Feedback): Description sources shown for description elements should not be editable
- It works for sources loaded during the session but not yet for sources created during the session.
I created a new... - 01:23 PM bug #9821: Description sources shown for description elements should not be editable
- Tested with Descripta prima Dall. in Descriptive DS test.
Categorical as well as quantitative data worked as expec... - 10:36 PM bug #9806: Clones should not be editable in factual data view and elsewhere
- Should we split this ticket?
- 01:47 PM bug #9816 (In Progress): Implement correct handling of more than one element for a character
- 10:31 AM bug #9825 (Closed): Selection wizards for areas in mulitlanguage instances show every vocabulary twice
- The selection wizard for areas for the distribution editor shows the vocabularies twice in cuba, this is a multilangu...
- 10:27 AM bug #9824 (New): [Distribution Editor] Areas in header should be sorted hierarchically
- mail WB:
c) kann man den Header der Tabelle hierarchisch anordnen? Ich nahm an, das wäre die „natural“ Option in d... - 10:23 AM bug #9823 (New): [Distribution Editor] Unsaved changes not shown in correct column when changing areas
- mail WB:
a) Ein wichtiger Bug: Wenn man die Auswahl der areas ändert, ohne vorher gespeichert zu haben, werden die... - 09:34 AM Revision cb993828 (cdm-dataportal): ref #9811 switching in search results to portal/taxon/{uuid}/taxonRelationshipsDTO and adapting code
10/22/2021
- 12:35 PM Revision e6fe76d0 (cdmlib): ref #9816: create display string for all elements of the same feature
- 11:33 AM feature request #7675 (Feedback): Make columns with default values togglable
- I do not understand the intention of this ticket, if a default value exist no exact values from the specimen should b...
- 11:17 AM bug #9815 (Resolved): When removing all elements of a description, the description disappears from factual data view, but still exist
- please review.
- 11:16 AM Revision 99ba434b (taxeditor): ref #9815: when removing all elements of description, do not remove it automatically
- 11:03 AM Revision d2b34d6b (taxeditor): avoid NPE
- 11:02 AM Revision 7a683d4e (taxeditor): ref #9819: one file was missing
- 10:56 AM Revision 91d72a14 (taxeditor): ref #9816: disable field for more than one description element
10/21/2021
- 09:30 AM bug #9814 (Resolved): Advanced search webservice for area throws NPE (mexico portal)
- Added the vocDto to termDto when creating the termDto because the voc representations are needed for the term search....
- 09:29 AM Revision dfd8da23 (cdmlib): ref #9814: add vocDto to termDto
10/20/2021
- 04:46 PM bug #9819 (Resolved): Rename "Nameeditor" to "Taxon Editor" in menus
- Searched for all "Namenseditor" and "name editor" strings and replaced it by "taxon editor"/"Taxon Editor"
- 04:44 PM Revision 25302047 (taxeditor): ref #9819: rename name editor to taxon editor in menues
- 04:40 PM bug #9817: AggregationWizard: Changing the maxRank results in empty minRank
- This should be fixed, please review.
- 04:30 PM bug #9817 (Resolved): AggregationWizard: Changing the maxRank results in empty minRank
- Applied in changeset commit:taxeditor|9f84c59541baaae91592b1870fd11d5c802d68a8.
- 04:29 PM Revision 9f84c595 (taxeditor): fix #9817: remember selected rank when update rank combo
- 03:28 PM bug #9821 (Resolved): Description sources shown for description elements should not be editable
- This should be fixed. Please review.
- 12:49 PM bug #9821 (Closed): Description sources shown for description elements should not be editable
- Since #7774 sources for descriptions are shown in the details view for description elements.
However, they should no... - 03:09 PM Revision 4351685c (taxeditor): ref #9821: sources of description should not be editable
- 01:18 PM feature request #9771: Implement Cdm2Cdm for vocabularies
- Note: in TaxEditor there is a first version for handling a second CdmServer at CdmServerInfo.getDevServerRemoteSource()
- 01:11 PM task #9822 (New): Improve performance for DDS aggregation
- e.g. by faster loading of data and by not reloading the full dataset after aggregation (there might be a ticket for t...
- 11:32 AM bug #9811 (Resolved): regression through removal of `TaxonRelationshipBeanProcessor` ?
- solved, see http://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/search/results/taxon?ws=portal%2Ftaxo...
- 11:22 AM Revision cb2b26b5 (cdm-dataportal): ref #9811 switching in search results to portal/taxon/{uuid}/taxonRelationshipsDTO and adapting code
- 11:21 AM Revision 3d73cbc2 (cdmlib): ref #9811 adding classification uuids to TaxonRelationshipsDTO
- 11:21 AM Revision fd07b3aa (cdmlib): avoiding NPEs in loadTreeBranch methods
10/19/2021
- 03:23 PM bug #9818 (Resolved): Sources not visible for disabled DescriptionElements
- This should be fixed.
- 03:21 PM bug #9814: Advanced search webservice for area throws NPE (mexico portal)
- I checked advance search on test servers and it works again: http://test.e-taxonomy.eu/dataportal/preview/euromed/cdm...
- 03:19 PM bug #9806 (In Progress): Clones should not be editable in factual data view and elsewhere
- Now cloned descriptions are disabled like computed descriptions.
- 03:18 PM Revision b9b4a1ec (taxeditor): ref #9806: disable cloned descriptions
- 02:58 PM Revision 22466e2e (taxeditor): ref #9818: avoid NPE
- 02:49 PM bug #9281 (Resolved): Set basionym not available for heterotypic synonyms after drag & drop
- This should be fixed, please review.
- 02:47 PM Revision eba0b772 (taxeditor): ref #9281: setBasionym should be available after d&d - continue
- 02:34 PM Revision 342be9a6 (taxeditor): ref #9281: setBasionym should be available after d&d
- 02:04 PM Revision 5af7ab6e (taxeditor): ref #9818: keep collapsable elements expandable when details are disabled
- 11:18 AM bug #9820 (New): OptionalDataException when saving character matrix
- After moving all used elements to Dtos the character matrix still needs a lot of time to start and sometimes an optio...
- 10:39 AM bug #8783: Massive Heap consumption in server instance opening the Description-Matrix editor
- Katja Luther wrote:
> Actually maybe this was the wrong ticket because the exception coming up again was not an OutO...
10/18/2021
- 06:39 PM Revision 22c38d41 (taxeditor): cleanup (cont.)
- 06:21 PM Revision 611fddf9 (taxeditor): cleanup
- 05:09 PM bug #8936: Improve default distribution formatting
- there was a problem with the release in the master branch, some commits have been lost. this is fixed and it is now t...
- 04:37 PM Revision 73bd997a (cdm-dataportal): Merge tag '5.27.1' into develop
- tagging hotfix
- 04:37 PM Revision e3b0407b (cdm-dataportal): Merge branch 'hotfix/5.27.1'
- 04:37 PM Revision ec495134 (cdm-dataportal): fix #9808 option to disable ssl cert validation
- 04:18 PM Revision 32ae53fa (cdmlib): cleanup
- 03:59 PM bug #9814: Advanced search webservice for area throws NPE (mexico portal)
- this method is only used in the TaxEditor:
~~~
eu.etaxonomy.taxeditor.store/src/main/java/eu/etaxonomy/taxeditor... - 02:09 PM bug #9814 (Feedback): Advanced search webservice for area throws NPE (mexico portal)
- I fixed the NPE so it does not throw an exception anymore. However, we need to discuss how the TermDTO should behave....
- 12:02 PM bug #9814: Advanced search webservice for area throws NPE (mexico portal)
- This is strange, the actual method getVocRepresentation_L10n_abbreviatedLabel() is never called in cdmlib so I don't ...
- 11:58 AM bug #9814 (Closed): Advanced search webservice for area throws NPE (mexico portal)
- ... Die Area-Terme in der Suche fehlen gerade komplett, das der Webservice nichts zurückliefert: https://132.248.13.8...
- 03:07 PM bug #9819 (Closed): Rename "Nameeditor" to "Taxon Editor" in menus
- follow up for #9744
Currently the "open in" context menu still uses Nameeditor.
Please also check for other occ... - 02:23 PM bug #9818 (Closed): Sources not visible for disabled DescriptionElements
- The sources of disabled description elements are not expandable but should.
- 02:09 PM Revision a4eb66ae (cdmlib): ref #9798 add also Spanish translation for country (label of vocabulary)
- 02:06 PM Revision 19252634 (cdmlib): cleanup
- 02:06 PM Revision d4542f66 (cdmlib): ref #9814 fix NPE in TermDto.getVocRepresentation_L10n (+..._abbreviatedLabel)
- 02:02 PM bug #8783 (Closed): Massive Heap consumption in server instance opening the Description-Matrix editor
- Actually maybe this was the wrong ticket because the exception coming up again was not an OutOfMemoryException but an...
- 01:51 PM bug #8783 (Feedback): Massive Heap consumption in server instance opening the Description-Matrix editor
- Was comment 16 ("changed from Closed to In Progress") a mistake, it completely misses any explanation?
I am assumin... - 12:54 PM bug #8783: Massive Heap consumption in server instance opening the Description-Matrix editor
- If we reopen then we should adapt the milestone. But maybe it is better to keep this closed and create a new ticket a...
- 12:44 PM bug #8783 (In Progress): Massive Heap consumption in server instance opening the Description-Matrix editor
- 01:37 PM bug #9817: AggregationWizard: Changing the maxRank results in empty minRank
- This is a regression therefore setting to 5.28
- 01:12 PM bug #9817 (Closed): AggregationWizard: Changing the maxRank results in empty minRank
- mail AM:
wenn ich den max-Rank beim DDS Aggregationsdialog ändere wird immer der min-Rang auch gelöscht. Auch in F... - 01:10 PM bug #9816 (Closed): Implement correct handling of more than one element for a character
- Implement correct handling in the character matrix, if two or more elements exist for one character. If one of the el...
- 12:35 PM bug #9815 (Closed): When removing all elements of a description, the description disappears from factual data view, but still exist
- mail AM:
wenn ich mehrere Descriptions in eine merge im Facts View und somit eine volle und eine komplett leere üb... - 11:18 AM bug #398 (Worksforme): DIPTERA: Typestatus entered as Notes for NameTypes
- Ich glaube dieses Ticket können wir schließen.
Keinerlei Hinweise darauf, was gemacht wurde, daher WORKSFORME - 10:38 AM bug #9813 (New): Details view should be available for literature (and default) descriptions in character matrix
- this is a subticket #9799 but with highest priority as adding sources to literature descriptions is essential functi...
10/15/2021
- 07:27 PM feature request #6387 (Closed): [Rule] Rank rule for CultivarPlantNames
- Added a level 2 rule that checks if cultivar (ICNCP) names have a cultivar rank.
Of course there could be much mor... - 07:25 PM Revision 64254a55 (cdmlib): ref 6387 add some first rules for rank<->code test (cont.)
- 07:10 PM Revision a01d2bd1 (cdmlib): ref 6387 add some first rules for rank<->code test
- 07:06 PM Revision 7828c44e (cdmlib): cleanup
- 05:55 PM bug #9785 (In Progress): Update script for missing measurment unit_ids (matrix)
- The above update should run with error recovery to avoid a break in update if the SQL fails (especially for non-MySQL)
- 05:53 PM bug #9785: Update script for missing measurment unit_ids (matrix)
- Some search SQL:
~~~sql
SELECT deb.id, fe.id, fe.titleCache -- , COUNT(*) AS n
FROM DescriptionElementBase deb... - 05:52 PM bug #9785: Update script for missing measurment unit_ids (matrix)
- An Update for MySQL:
~~~
UPDATE DescriptionElementBase deb LEFT OUTER JOIN DefinedTermBase fe ON fe.id = deb.feat... - 04:14 PM bug #9477 (Closed): New ordered terms do not have correct order index
- 04:10 PM feature request #8979 (Closed): Prevent misuse of field initial for personal names
- 12:05 PM feature request #8979: Prevent misuse of field initial for personal names
- In Vaadin perfectly implemented there 100%, but did not check the TaxEditor if it is there relevant.
- 04:09 PM task #9308 (Closed): Supress "designated by" reference in portal in registration ListView and RegistrationWorkingSetEditor
- 11:33 AM task #9308: Supress "designated by" reference in portal in registration ListView and RegistrationWorkingSetEditor
- Task is perfectly implemented, ticket can be closed.
- 04:06 PM bug #8936: Improve default distribution formatting
- It looks item suffix is currently not yet handled correctly in Drupal Code.
Example from mexico flora: https://13... - 12:17 PM bug #9812 (Closed): Display of scientific name in the list-view of Vaadin
- As of 15 Oct 2021 scientific names (Vaadin release system) are displayed mainly without blanks between genus, species...
- 11:59 AM feature request #7640 (Closed): Update ISO country names where necessary
- 11:49 AM feature request #7640: Update ISO country names where necessary
- I am happy with the implementation, short names and it is clear which country is meant. Tested it in Vaadin, release ...
10/13/2021
- 03:22 PM bug #9797 (Closed): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- new ticket for the open issue #9811
- 03:22 PM bug #9811 (Closed): regression through removal of `TaxonRelationshipBeanProcessor` ?
- It seems as if the removal of the `TaxonRelationshipBeanProcessor` has caused this new problem
: Fix BigDecimal algebra in aggregation algorithms
- Moved polytomous key handling to new ticket #9810
- 05:35 PM task #9810 (New): Test if BigDecimal algebra is correct in PolytomousKey algorithms
- copied from #9123 and #8978
Aggregation is checked and fixed in the meanwhile (#9123) - 05:31 PM feature request #9798 (Closed): Import Spanish representations for countries
- 04:02 PM bug #9797: LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- It seems as if the removal of the `TaxonRelationshipBeanProcessor` has caused this new problem
 on portal/taxon/{uuid} with misapplied names
- There are still problems with loading MAN, e.g. https://europlusmed.org/cdm_dataportal/search/results/taxon?ws=portal...
- 02:52 PM Revision 29d0b0f6 (cdmlib-apps): some upgrade for BgbmInstancesUpdater
- 02:37 PM bug #9808 (Closed): option to disable ssl/tsl certificate validation of the cdm webserver
- 02:30 PM bug #9808 (Resolved): option to disable ssl/tsl certificate validation of the cdm webserver
- Applied in changeset commit:cdm-dataportal|91313ab4c0d34ddd9d9c745e268b16c4eefe234b.
- 02:29 PM bug #9808 (Closed): option to disable ssl/tsl certificate validation of the cdm webserver
- in situations when a self signed certificate is being used with the cdmserver it is needed to disable certificate val...
- 02:37 PM feature request #9786 (Closed): Implement tags CY and fix PY handling for RIS import
- This should work as tests exist. If there are open issues we should add them to #9809
- 02:35 PM feature request #6636: First version of RIS reference import (e.g. for Endnote import)
- Generally this works. However, there are a couple of open issues handled in #9809.
- 02:34 PM feature request #9809: Implement further tags for RIS reference import
- NaK:
Nur bei Book Chapters funktioniert der Import nur teilweise, dafür muss man ja das Buch separat anlegen und d... - 02:31 PM feature request #9809 (New): Implement further tags for RIS reference import
- in #6636 and #9786 the most important tags for RIS import have been implemented. However, there are a couple of more ...
- 02:31 PM Revision 17ed1083 (cdm-dataportal): Merge tag '5.27.1' into develop
- tagging hfx release
- 02:31 PM Revision 827c80d5 (cdm-dataportal): Merge branch 'hotfix/5.27.1'
- 02:31 PM Revision 2415b2e3 (cdm-dataportal): fix #9808 option to disable ssl cert validation
- 02:30 PM Revision 91313ab4 (cdm-dataportal): fix #9808 option to disable ssl cert validation
- 10:27 AM Revision 6b34400c (cdmlib): minor and cleanup
10/11/2021
- 09:55 PM feature request #6818: Default Image Viewer: setting to enable display of 'Media Representations'
- According to commit this was fixed in 4.9
- 09:49 PM bug #7979: Registration date and time, display
- Can we adapt milestone or remove it?
- 09:46 PM bug #4721 (Feedback): RestServices for list methods return error when index is out of range
- Is this still an open issue? The above link seems to return a correct empty list now.
- 09:10 PM bug #3635: Protologue media should also be displayed when mime type is missing
- is this still an open issue?
- 09:08 PM bug #3511: errors are not cleared after reloading the configuration
- is this still an open issue?
- 08:52 PM bug #2592 (Worksforme): InvalidDataAccessApiUsageException when saving description scope
- I could save a scope for a description now so I guess this issue is solved in the meanwhile.
- 08:15 PM bug #5484 (Worksforme): Connecting to local H2 via local Mgd throws NPE in CdmServiceCacher
- I cannot reproduce therefore close as worksforme
- 08:14 PM bug #5485 (Duplicate): h2 database connection fails if datasource view is open
- This is either fixed already or will be fixed once #9742 is fixed. I tested with a workaround using AUTO_SERVER=TRUE
- 08:01 PM feature request #9771 (In Progress): Implement Cdm2Cdm for vocabularies
- 05:05 PM bug #9807: Matrix should not collapse after aggregation
- AM 2021-10-1:
... Wir müssten also entweder doch herausfinden, woran es liegt, dass diese zusätzlichen Knoten ents... - 04:57 PM bug #9807 (Closed): Matrix should not collapse after aggregation
- As the refresh after aggregation lead to row duplications (of taxa and maybe others) it was temporarily implemented i...
- 04:37 PM feature request #8706 (Closed): taxeditor error report with timestamps
- I guess we can close this ticket. Timestamping generally works. Open new ticket if there are open issues left.
- 04:34 PM feature request #8467 (Closed): Save a "snapshot" of the SpecimenDescriptions used for aggregation
- This for me seems to be fixed. Open issue on visibility of clones moved to new ticket #9806
- 04:32 PM bug #9806: Clones should not be editable in factual data view and elsewhere
- AM: (2021-10-7)
Descriptions Clones, die an Specimens oder auch Taxa hängen sind derzeit noch normal bearbeitbar.
... - 04:31 PM bug #9806 (Closed): Clones should not be editable in factual data view and elsewhere
- copied from #8467:
Currently only aggregated data are not editable (depending on configuration). Also cloned data ... - 04:04 PM feature request #7981 (Closed): Add configuration UI for matrix description aggregation
- I created a ticket for old and new open issues: #9805
- 04:03 PM feature request #9805 (New): Open issues for DDS aggregation dialogue
- copied from #7981
- ~~aggregating full dataset does not work~~ (#9803)
- ~~matrix should not collapse after aggre... - 03:30 PM feature request #7980 (Closed): Enhance matrix description aggregation
- 03:27 PM feature request #7980: Enhance matrix description aggregation
- open issues moved to #9804
- 03:27 PM feature request #9804 (New): Further enhance description aggregation
- copied from #7980
- consider default values during aggregation
- deal with outliers etc.
- improve error and ... - 02:37 PM Revision 4fdc7952 (cdm-server): Merge branch 'release/5.27.0' into develop
- 02:37 PM Revision ee86969f (cdm-server): jenkins merging release branch into master (strategy: theirs)
- 02:36 PM Revision 0be21ca1 (cdm-server): updating poms for branch'release/5.27.0' with non-snapshot versions
- 02:36 PM Revision cc117ebd (cdm-webapp): Merge branch 'release/5.27.0' into develop
- 02:36 PM Revision 4611dabe (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 02:35 PM Revision 1c9fea82 (cdm-webapp): updating poms for branch'release/5.27.0' with non-snapshot versions
- 02:35 PM Revision 2971458c (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.27.0
- 02:33 PM feature request #9795 (Closed): Add literature descriptions to matrix aggregation
- 02:32 PM bug #9803: Aggregating full dataset does not work
- Related to this I found that there is redundancy in the code. This lead to a failing fix for the rank handling as it ...
- 12:53 PM bug #9803 (Closed): Aggregating full dataset does not work
- Choosing "Aggregate all taxa of the descriptive datase" currently does not work.
This is because the dataset varia... - 02:10 PM Revision 17e0ac1e (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 02:09 PM Revision 7bd11533 (taxeditor): Merge branch 'release/5.27.0' into develop
- 02:09 PM Revision c89621ab (taxeditor): Merge branch 'release/5.27.0'
- 02:07 PM Revision 9a47de32 (cdm-dataportal): Merge branch 'release/5.27.0' into develop
- 02:07 PM Revision 1032dd43 (cdm-dataportal): updating poms for branch'release/5.27.0' with non-snapshot versions
- 02:06 PM Revision 0780d58d (cdm-vaadin): updating poms for branch'release/5.27.0' with non-snapshot versions
- 02:06 PM Revision 44c4fa25 (cdm-dataportal): release-preparation: production level css
- 02:06 PM Revision e8da55e7 (cdm-vaadin): jenkins bumping cdmlib.version to 5.27.0
- 02:06 PM Revision 0e3b1877 (cdmlib): Updating develop poms back to pre merge state
- 02:06 PM Revision 295c852f (cdmlib): Merge branch 'master' into develop
- 02:06 PM Revision afb06063 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 02:06 PM Revision dab26056 (cdmlib): Merge branch 'release/5.27.0'
- 01:47 PM Revision 51bd4576 (cdmlib): updating poms for branch'release/5.27.0' with non-snapshot versions
- 01:41 PM Revision 575a6bd5 (cdmlib-apps): ref #9778 adapt redlist import to new existing ranks lusus and subproles
- 01:40 PM Revision dab55660 (cdmlib-apps): ref #9780 fix grex handling in some scripts
- 01:38 PM Revision ae1ae34c (cdmlib-apps): remove JvmLimitsException handling form EuroMedDistributionAggregationActivator
- 01:03 PM Revision 48009893 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.27.0-SNAPSHOT
- 01:03 PM Revision a95975ed (cdm-webapp): updating poms for 5.28.0-SNAPSHOT development
- 01:03 PM Revision 9af719d8 (cdm-webapp): updating poms for 5.27.0 branch with snapshot versions
- 01:03 PM Revision 01d670ed (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.28.0-SNAPSHOT
- 01:01 PM Revision 70a62925 (cdm-vaadin): jenkins bumping cdmlib.version to 5.27.0-SNAPSHOT
- 01:01 PM Revision 7cf401e1 (taxeditor): Updated version in pom / project files to taxeditor version : 5.28.0-SNAPSHOT and cdmlib version : 5.28.0-SNAPSHOT
- 01:01 PM Revision 47020ac1 (cdm-vaadin): updating poms for 5.28.0-SNAPSHOT development
- 01:01 PM Revision 104bacb0 (cdm-vaadin): updating poms for 5.27.0 branch with snapshot versions
- 01:01 PM Revision 2be1f4fa (taxeditor): Updated version in pom / project files to taxeditor version : 5.27.0 and cdmlib version : 5.27.0
- 01:01 PM Revision 09f6d172 (cdm-vaadin): jenkins bumping cdmlib.version to 5.28.0-SNAPSHOT
- 01:01 PM Revision 9bc9587a (cdm-server): updating poms for 5.28.0-SNAPSHOT development
- 01:00 PM Revision f2fca10a (cdm-dataportal): updating poms for 5.28.0-SNAPSHOT development
- 12:57 PM Revision 206c20c1 (cdmlib): updating poms for 5.28.0-SNAPSHOT development
- 12:55 PM Revision bbcd0abb (taxeditor): ref #9803 better handling of redundant minMaxRank and geoFilter handling in aggregation wizard
- 11:24 AM bug #9802 (New): Label for min=max does not unify values in Matrix QuantitativeData label provider
- e.g. I get [987-987] instead.
Also the unit is missing.
In general we should try to unify the matrix label with...
10/08/2021
- 09:43 PM Revision f717518e (cdmlib): remove deprecated method
- 09:39 PM Revision 3c420001 (cdmlib): ref #9801, ref #7980, ref #8871 remove aggregated source descriptions from aggregation and fix persistence issues
- 09:18 PM bug #9801 (New): Orphan removal does not work correctly for CdmLinkSource
- as part of OriginalSourceBase. As it is 1:1 the mapping should be done the other way round to make orphan removal wor...
- 05:57 PM Revision c50ece59 (cdmlib): cleanup
- 04:05 PM Revision 1ac9cae7 (taxeditor): ref #7981: avoid NPE
- 03:56 PM Revision a9b7ea5d (cdmlib): ref #9772 add deproxy to collector title computation
- 01:40 PM Revision 80bbeb1b (cdmlib): change line number for debugging
- 01:31 PM Revision 541ae6bc (cdmlib): ref #7980 fix concurrent modification exception
- 01:15 PM Revision e7e11b99 (taxeditor): set default for unpublished taxa to true
- 01:06 PM Revision f11b2271 (taxeditor): set default sel in wizard to values in configurator
- 01:04 PM Revision 843fbe64 (cdmlib): cleanup
- 01:04 PM Revision 7fee6b88 (cdmlib): ref #7980 fix NoSuchElement exception (cont.)
- 11:48 AM Revision 2374e385 (taxeditor): ref #7981: select configuration default values
- 11:07 AM Revision 4ca90889 (cdmlib): ref #9772: adapt collectorstring, use collectorTitleCache
- 10:42 AM Revision 305b0475 (taxeditor): statistical value details view should be disabled for computed desc
- 10:30 AM Revision ef1a6397 (cdmlib): ref #7980 fix NoSuchElement exception
- 12:02 AM Revision edfed83c (taxeditor): cleanup
10/07/2021
- 11:57 PM Revision c978affc (taxeditor): cleanup
- 11:45 PM Revision a1417825 (taxeditor): cleanup
- 10:18 PM Revision 3194d52a (cdmlib): update Datasource script
- 08:44 PM Revision c0228744 (taxeditor): ref #7981 adapt label for aggregated taxa/subtrees
- 07:42 PM Revision 1a96d01d (cdmlib): ref #7980, ref #8871 improve error handling and verification in aggregations
- 06:32 PM Revision 293b1494 (cdmlib): cleanup, javadoc and minor
- 06:31 PM Revision bdd1b0c7 (cdmlib): ref #7980 fix aggregation for titleCache of reused descriptions
- 06:29 PM Revision 6ce5c551 (cdmlib): ref #7980 fix aggregation for measurement units (still open are not equal units)
- 06:26 PM Revision 74ccd9f4 (cdmlib): adapt dummy measurement unit to meter in test dataset
- 05:18 PM Revision cdcad85a (taxeditor): ref #7981: read aggSourceMode from configurator in aggregation wizard (cont. II)
- 04:20 PM Revision 6b6b71cf (cdmlib): ref #7980 fix tests for aggregation source mode
- 03:58 PM Revision 469b4d69 (taxeditor): ref #7981: read aggSourceMode from configurator in aggregation wizard (cont.)
- 03:56 PM Revision f677247f (cdmlib): ref #7981, ref #7980, ref #8871 explicitly defined source modes for aggregation configurators
- 03:55 PM Revision d98a1622 (cdmlib): javadoc
- 03:25 PM Revision a76ae357 (taxeditor): ref #7981: read aggSourceMode from configurator in aggregation wizard
- 03:24 PM Revision 583471b3 (taxeditor): cleanup
- 01:07 PM Revision b7ad4bb2 (cdmlib): some renaming
- 01:02 PM Revision 6163ee20 (cdmlib): ref #8871, ref #7980 handle aggregation source mode TAXON for toParent
- 11:04 AM Revision 82b18118 (cdmlib): ref #8871, ref #7980 handle aggregation source modes for SDD aggregation
- 10:26 AM Revision 472080b4 (taxeditor): ref #9772: fix doubled menu items
- 10:04 AM Revision 7e1619ea (cdmlib): ref #8871, ref #7980 adapt available source modes for DDS aggregation
- 09:47 AM Revision 67c1a4e3 (taxeditor): sort taxon nodes in taxon filter of DDS editor
- 02:10 AM Revision a4001175 (cdmlib): ref #8871 try to fix failing aggregation tests (cont.)
- 01:50 AM feature request #9795 (Resolved): Add literature descriptions to matrix aggregation
- this is probably fully resolved
- 01:49 AM task #8871 (In Progress): Remaining issues to unify description aggregation methods
- 01:47 AM Revision bfbf1c9c (cdmlib): cleanup
- 01:46 AM Revision 67c26aa8 (cdmlib): ref #8871 try to fix failing aggregation tests
- 01:40 AM Revision 4b70788c (cdmlib): ref #8871, ref #9331 fix DescriptionElementSource.clone , e.g. for DistributionAggregation
- 01:33 AM Revision f600798d (cdmlib): cleanup
10/06/2021
- 10:13 PM Revision 98623528 (cdmlib): cleanup and minor
- 06:28 PM Revision 5f20c74a (cdmlib): ref #7980 delete not needed descriptions after aggregation
- 06:25 PM Revision 569f15d4 (cdmlib): fix problem with strange DefinedTermBase_InverseRepresentation_AUD1 metadata
- 06:24 PM Revision 0e0fe1fb (cdmlib): cleanup and minor
- 06:21 PM Revision fe503ae0 (cdmlib): remove handling for not thrown exception JvmLimitsExceed
- 02:58 PM Revision 505cd4db (taxeditor): show all description elements in factual data view of taxa
- 02:31 PM Revision ac67f386 (cdmlib): ref #7980 minor changes to aggregation tests
- 02:31 PM Revision 37cdc012 (cdmlib): ref #7980 reduce minFreeHeap for aggregation (cont.)
- 02:30 PM Revision c1c6c66e (cdmlib): cleanup
- 02:16 PM Revision 4296d7cb (cdmlib): ref #7980 reduce minFreeHeap for aggregation
- 01:40 PM Revision 120c4ab8 (taxeditor): default for availableForTaxa and availableForSpecimen set to true
- 01:34 PM Revision c549e4d6 (taxeditor): add available for parts to character details
- 12:08 PM Revision e8edefb2 (cdmlib): cleanup
- 12:08 PM Revision 5d1ef7fc (cdmlib): ref #9510 adapt specimens holding description label (cont. II)
- 11:31 AM bug #9510 (In Progress): Improve label for descriptions created via DDS matrix
- 11:29 AM Revision 7f25cd4e (cdmlib): ref #9510 adapt specimens holding description label (cont.)
- 11:28 AM Revision 24190230 (cdmlib): cleanup
- 11:26 AM feature request #9511 (Resolved): Move specimens/individual associations for matrix into same description
- This seems to be fixed in the meanwhile. Can you please double check and if true close the ticket?
If you find the... - 11:06 AM Revision a5c8139e (cdmlib): cleanup and explicit title for IndividualsAssociation taxon descriptions
- 10:30 AM Revision a1a25627 (cdmlib): minor
- 09:26 AM bug #6523: Correct display of misspellings in synonymy
- another example case from the carypophyllales portal:
----
ich habe eben gesehen, dass die misspellings im Po...
10/05/2021
- 11:54 PM Revision 310956ec (cdmlib): fix compile error and cleanup (cont.)
- 11:50 PM Revision b78fe281 (cdmlib): fix compile error and cleanup
- 11:36 PM Revision 12da0940 (cdmlib): cleanup
- 11:30 PM Revision 09b7d505 (cdmlib): ref #7980, ref #8871, ref #9795 fix source handling in StructuredDescriptionAggregation
- 03:09 PM Revision 9b4330d1 (cdmlib): revert add supresswarning annotation
- 02:39 PM Revision 06367522 (cdmlib): cleanup
- 02:39 PM Revision 8d87730d (cdmlib): fix compile error
- 02:01 PM Revision 44900eab (cdmlib): remove cloneNotSupportedException from DescriptionElementBase and some cleanup
- 01:55 PM Revision 802b31bc (cdm-dataportal): avoiding usage of deprecated property determinedNames
- 01:46 PM Revision eb1d334b (cdmlib): code cleaning - continue
- 01:35 PM bug #9772: Improve DTO usage for character matrix
- Andreas Müller wrote:
> Can you please also leave a note which model objects have been replaced by this ticket?
>
... - 01:21 PM bug #9772 (Resolved): Improve DTO usage for character matrix
- Code cleaning done for TaxonNodeService/Dao and DescriptiveDatasetService.
- 10:54 AM bug #9772: Improve DTO usage for character matrix
- Andreas Müller wrote:
> Please check also if code is clean. E.g. I found DescriptiveDatasetService.getDescriptiveDat... - 08:45 AM bug #9772: Improve DTO usage for character matrix
- Andreas Müller wrote:
> Same in TaxonNodeServiceImpl.getTaxonNodeDtos().
>
> By the way I wonder if all these HQL... - 01:28 PM Revision c6890f7a (cdmlib): code cleaning - continue
- 01:17 PM Revision b3c135e2 (cdmlib): code cleaning
- 01:15 PM Revision 128317f4 (cdmlib): code cleaning
- 10:53 AM Revision 3ed10837 (cdmlib): ref #9772: code cleaning - move hql code to persistence
- 09:57 AM Revision c61c9db0 (cdmlib): code cleaning, move hql queries to dao
- 09:40 AM bug #9800 (In Progress): Open issues for character matrix
- * implement the details view again to be able to edit some more advanced data like the modifiers. This worked in earl...
- 09:40 AM bug #9799 (New): Details view should be available for character matrix
- Implement the details view again to be able to edit some more advanced data like the modifiers. This worked in earlie...
- 09:30 AM bug #9073 (Worksforme): Configuring the matrix view throws HTTP invoker exception
- could not reproduce this anymore, so close this ticket.
- 09:20 AM bug #8243: Cdm Cache uses a lot of disk space
- We should have a look on this with the new implementation because the matrix worked with descriptions and descriptive...
- 08:56 AM bug #9074: Specimen missing a collector + n° and missing a collection identifier (Barcode, Accession number) not identifiable in descriptive Matrix
- With the actual implementation the "collector & nr" field is always filled, if a field unit with collector and collec...
10/04/2021
- 04:34 PM bug #9772: Improve DTO usage for character matrix
- Same in TaxonNodeServiceImpl.getTaxonNodeDtos().
By the way I wonder if all these HQL statements are necessary. Ha... - 04:23 PM bug #9772: Improve DTO usage for character matrix
- Please check also if code is clean. E.g. I found DescriptiveDatasetService.getDescriptiveDataSetDtoByUuid() which inc...
- 04:01 PM bug #9772: Improve DTO usage for character matrix
- Can you also check for other open matrix tickets and add the new tag "matrix" to them so we can check for all open ma...
- 03:52 PM bug #9772: Improve DTO usage for character matrix
- Generally we can close this ticket.
- 03:52 PM bug #9772: Improve DTO usage for character matrix
- Can you please also leave a note which model objects have been replaced by this ticket?
And can you check the (new... - 03:50 PM bug #9772: Improve DTO usage for character matrix
- This generally seems to work now as expected.
I guess we need to create a couple of follow-up tickets. I could thi... - 02:24 PM bug #9772: Improve DTO usage for character matrix
- Some more tests (with Lactucinae):
found two issues, both are already fixed:
* avoid NPE for quantitative data ... - 11:33 AM bug #9772: Improve DTO usage for character matrix
- Andreas Müller wrote:
> Adding a new literature to a taxon does show the taxon row 2x if a specimen description for ... - 11:30 AM bug #9772 (Feedback): Improve DTO usage for character matrix
- Adding a new literature to a taxon does show the taxon row 2x if a specimen description for this taxon existed before...
- 04:25 PM Revision 4deab588 (cdmlib): cleanup
- 03:35 PM bug #9796 (Closed): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- the changes seem to solve the initialization problems without noticeable side-effects.
- 02:53 PM Revision cbd2db51 (taxeditor): ref #7981: fix enable/disable in aggregation wizard
- 02:44 PM Revision d10e83d5 (cdmlib): ref #9772 cleanup SpecimenOrObservationBaseDTO (cont.)
- 02:39 PM Revision 20baf421 (cdmlib): cleanup SpecimenOrObservationBaseDTO
- 02:12 PM Revision 0b54e3e1 (cdmlib): ref #7980, ref #8871 reuse description items for DDS aggregation
- 02:09 PM Revision 22f2a9b8 (cdmlib): cleanup
- 02:08 PM Revision 44ddcdb3 (taxeditor): ref #9772: check for changes before start aggregation
- 02:06 PM Revision 11baea18 (cdmlib): ref #7980 remove multiple description items for same feature from reused description
- 01:52 PM bug #9797 (Resolved): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- 01:52 PM Revision c7378b10 (cdmlib): ref #9797 introducing TaxonAutoInitializer to init taxonNodes and adapting init strategies
- 01:52 PM Revision 6f10f4a4 (cdmlib): ref #9797 comment on UNUSED TaxonNodeAutoInitializer
- 01:52 PM Revision 19732d4e (cdmlib): ref #9797 disabling and deprecating TaxonRelationshipBeanProcessor
- 01:50 PM Revision 4bb63f91 (cdmlib): ref #9797 better trace logging for bean initialization
- 01:50 PM Revision 7eb8206e (cdmlib): ref #9797 Taxon.isMisapplicationOnly() as transient method
- 12:54 PM Revision 64e5bc9f (cdmlib): ref #9772: add collectors string with collector and collectorsnumber
- 12:25 PM Revision 337fab7d (taxeditor): ref #9772: fix collector and number
- 12:23 PM Revision e0bfdfcc (cdmlib): ref #9772: add collectors string with collector and collectorsnumber
- 09:28 AM Revision bf9c6f71 (cdmlib): ref #7981: fix taxonnodeDto taxon titlecache
10/02/2021
- 02:13 AM Revision dd94a952 (cdmlib): add CDMLINK to ClearDB_with_Terms_DataSet.xml
- 12:18 AM Revision 0f720e98 (cdmlib): minor and cleanup
10/01/2021
- 09:46 PM Revision 476ec51f (cdmlib): include taxon name in taxon node referencing objects formatter
- 07:26 PM Revision 2d5e8696 (cdmlib): fix compile error
- 07:15 PM Revision 36ccd41f (cdmlib): cleanup
- 06:15 PM Revision 405677c2 (taxeditor): ref #7981: indent added
- 06:10 PM Revision b52812b1 (cdmlib): ref #7981: fix taxonnodeDto taxon titlecache
- 05:51 PM Revision 52002b9b (taxeditor): ref #7981: improve aggregation ui
- 05:41 PM Revision 6991db68 (taxeditor): disable 'use default descr' in aggreg config wizard
- 04:24 PM Revision 405ec428 (taxeditor): ref #7981 update labels for aggregation filter selection
- 01:22 PM Revision 114b2aae (cdmlib): fix wrong parameters in taxonnodeDto in DDS Dto
- 01:15 PM Revision e83d7600 (taxeditor): ref #7981 fix literature description default value handling
- 01:01 PM Revision f4bb39c6 (taxeditor): cleanup
- 01:01 PM Revision 8f7bd0a1 (taxeditor): ref #7981 improve publish, literature and default description handling in StructuredDescriptionAggregationConfigurationWizardPage (cont.)
- 01:01 PM Revision 6c5aa726 (taxeditor): ref #7981 move "Aggregate all taxa in descriptive dataset" to top
- 01:01 PM Revision e1834f73 (taxeditor): ref #7981 improve publish, literature and default description handling in StructuredDescriptionAggregationConfigurationWizardPage
- 01:00 PM Revision e0142947 (taxeditor): cleanup
- 12:04 PM Revision 1f7cd5bd (taxeditor): set default values in aggregation conf wizard for the new attributes
- 10:56 AM Revision f7186f68 (cdmlib): Simplify stateData comparator
- 10:44 AM Revision f33239f5 (cdmlib): fulfill compare contract for stateData comparator
- 10:32 AM Revision 7398f69e (taxeditor): avoid NPEs
- 10:32 AM feature request #9798: Import Spanish representations for countries
- Import is prepared but still needs to run after the next release
- 10:07 AM feature request #9798 (Resolved): Import Spanish representations for countries
- Applied in changeset commit:cdmlib-apps|9920661b646173b407c80a48fba951c648f011fc.
- 09:32 AM feature request #9798 (Closed): Import Spanish representations for countries
- We can use the same code as for the German/Latin ranks written for edaphobase.
- 10:17 AM Revision 317f174d (cdmlib): minor
- 10:17 AM Revision 1e12fcd5 (cdmlib): ref #9798 add Spanish country labels to term csv files
- 10:07 AM Revision 9920661b (cdmlib-apps): fix #9798 add activator for Spanish country representations
- 10:05 AM Revision 6efca48a (cdmlib-apps): cleanup
- 10:05 AM Revision c1a05f5d (cdmlib-apps): Adapt E+M aggregation activators to new AggregationMode.byXXX signatures
- 09:51 AM Revision 114b1bfe (cdmlib): avoid NPE in state comparat
- 09:39 AM Revision 61a16467 (taxeditor): add additional attributes to aggregation wizard
- 09:34 AM Revision 526223e5 (cdmlib): cleanup
- 09:34 AM Revision 5cea4919 (cdmlib): ref #9798 make Spanish uuid public
- 09:24 AM Revision 2abccc58 (taxeditor): ref #7981 enable source modes for checked aggregation modes and some code cleaning
- 09:11 AM Revision 94dfa139 (cdmlib): sort states in aggregated descriptions on count - continue
- 08:56 AM bug #9797 (Closed): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- eg:
http://localhost:8080/portal/taxon/b384de9c-0a70-48e9-8fcc-1f772a331544.json
http://int.e-taxonomy.eu/cd... - 08:48 AM Revision e2171f2a (cdmlib): sort states in aggregated descriptions on count
- 08:42 AM Revision 8cb33c6c (taxeditor): javadoc
09/30/2021
- 06:35 PM Revision 838c7344 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 06:32 PM Revision 45140a15 (cdmlib): ref #9772: do not create empty elements in taxon descriptions
- 05:49 PM Revision c9369579 (cdmlib): ref #9795 include literature aggregation by default
- 05:49 PM Revision ecaf2cf6 (cdmlib): cleanup
- 05:46 PM Revision 3b6350d6 (cdmlib): ref #7980 fix NPE for StateData having no state
- 05:46 PM Revision 1d1c2ae7 (cdmlib): ref #8871 remove isAggregateToHigherRanks from StructuredDescriptionAggregationConfiguration
- 02:03 PM bug #9630: Make the handling of computed description configurable
- Added check whether a d&d target is a computed description.
- 02:02 PM Revision 1df9cf60 (taxeditor): ref #9630: d&d should not allowed to a computed description if
- 01:49 PM Revision 1475999b (taxeditor): ref #9772: revert some changes in l10n
- 12:51 PM Revision 0e123335 (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 12:50 PM Revision 4512ae1c (taxeditor): ref #9772: code cleaning
- 12:44 PM bug #9772 (Resolved): Improve DTO usage for character matrix
- There are still two UI issues, the color of the field where a default description exists, changes (of the color) are ...
- 09:56 AM bug #9772 (In Progress): Improve DTO usage for character matrix
- 09:56 AM bug #9772: Improve DTO usage for character matrix
- Andreas Müller wrote:
> Katja Luther wrote:
> > need to be tested:
>
> what does this mean? Did you test it or i... - 09:35 AM bug #9772: Improve DTO usage for character matrix
- Katja Luther wrote:
> need to be tested:
what does this mean? Did you test it or is it still to be done?
- 09:17 AM bug #9772: Improve DTO usage for character matrix
- need to be tested:
* add new specimen, add character data -> save , add more character data -> save -> check for d... - 12:04 PM Revision e3c9d137 (taxeditor): ref #7981 include unpublished to taxon filter (explicit checkbox is still missing)
- 12:04 PM Revision ff7bfebe (taxeditor): ref #7981 fill DDS aggregation dialogue with correct values for aggregation mode
- 12:04 PM Revision a89350b0 (taxeditor): fix potential NPE in AggregationConfigurationWizardPage
- 12:04 PM Revision 3e4d8bf8 (taxeditor): Cleanup aggregation handler
- 12:04 PM Revision 5a83898e (taxeditor): cleanup
- 10:51 AM Revision bb03a041 (taxeditor): ref #9772: redraw after literature desc creation and code cleaning
- 10:40 AM Revision 926b7eda (cdmlib): ref #9772: continue solving problems with rowWrapper
- 10:05 AM Revision bd94706c (cdmlib): ref #9772: fix problems with doubled states in literature descriptions
- 08:01 AM Revision d70979a4 (taxeditor): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/taxeditor into develop
- 07:58 AM Revision a0914872 (taxeditor): ref #9772: fix problems with rowWrapper
- 07:54 AM Revision 205624c1 (cdmlib): Merge branch 'develop' of ssh://dev.e-taxonomy.eu/var/git/cdmlib into develop
- 07:53 AM Revision a0f0c203 (cdmlib): ref #9772: fix problems with rowWrapper
09/29/2021
- 04:11 PM bug #9796 (Resolved): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- 03:51 PM bug #9796: LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- this is related to the changes made for #9433 ( commit:40708c6 )
- 03:13 PM bug #9796 (Closed): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
- eg:
http://test.e-taxonomy.eu/cdmserver/euromed/portal/taxon/e1688082-958a-4787-9afa-f46297920eee.json
htt... - 04:03 PM Revision a1012824 (cdmlib): ref #9796, ref #9433 extending init strategy for related taxa
- 03:56 PM Revision c13b2469 (taxeditor): fix compile errors and cleanup
- 03:46 PM feature request #8713 (Closed): Improve structured descriptive data aggregation
- remaining issues handled in #7980
- 03:38 PM Revision 8a6770d6 (cdmlib): ref #9795 evaluate includeLiterature
- 03:08 PM Revision 9341b749 (cdmlib): rename static AggregationMode methods
- 02:51 PM Revision 9c09a16e (cdmlib): minor
- 02:40 PM task #9123: Fix BigDecimal algebra in aggregation algorithms
- Rounding in aggregation is now done using MathContext.DECIMAL32 and stripTrailingZeros(). This avoids rounding errors...
- 11:49 AM task #9123 (In Progress): Fix BigDecimal algebra in aggregation algorithms
- There is a problem with average computing in aggregation. RoundingMode is missing.
Once this is fixed we need to che... - 02:32 PM Revision 003ae517 (cdmlib): minor
- 02:31 PM Revision b7cfb9fb (cdmlib): ref #9123 improve precision handling for average computing in DDS aggregation
- 11:52 AM Revision b55fc921 (cdmlib): ref #9123 add rounding to average computing in DDS aggregation (not yet complete)
- 10:02 AM Revision e55c87fd (cdmlib): ref #7980 add exception message to unhandled exception handling
- 10:00 AM Revision e176d33f (cdmlib): put failing test preliminary to ignore
- 10:00 AM Revision 058e1e67 (cdmlib): cleanup
- 09:54 AM Revision 02f22141 (taxeditor): ref #7981 try to handle exceptions in structured aggregation handler
- 09:52 AM Revision 9bd56314 (taxeditor): cleanup
- 09:04 AM Revision ef827ced (cdmlib): add stacktrace handling for StructuredDescriptionAggregationTest (cont.)
- 09:03 AM Revision c356f10f (cdmlib): cleanup UpdateResult
- 08:44 AM Revision db3f7e5d (cdmlib): add stacktrace handling for StructuredDescriptionAggregationTest
09/28/2021
- 11:21 PM feature request #9795 (In Progress): Add literature descriptions to matrix aggregation
- 11:19 PM feature request #9795 (Closed): Add literature descriptions to matrix aggregation
- copied from #7980
- 11:21 PM Revision 7043c4ee (cdmlib): ref #9795 add literature descriptions to matrix aggregation
- 11:14 PM Revision 83efeb94 (cdmlib): minor issues for StructuredDescriptionAggregationTest
- 01:31 PM bug #9794 (Closed): external-links: World Flora Online link template improved
- done!
- 01:19 PM bug #9794 (Closed): external-links: World Flora Online link template improved
- the external link to World Flora Online results in a too unspecific search and returns far too many results.
Eckha... - 01:31 PM Revision 1272ab60 (cdm-dataportal): ref #9794 wfo link improved - update script
- 01:21 PM Revision eeb2bfe0 (cdm-dataportal): ref #9794 wfo link improved
- 11:36 AM discussion #9793 (New): webservice versioning strategy
- see
https://dzone.com/articles/rest-api-versioning-strategies-1 - 11:17 AM Revision 310a5f85 (taxeditor): id column in specimen selection dialog smaller and moved
- 11:14 AM task #9792 (Closed): remove ePic from ext-links
- 10:52 AM task #9792 (Closed): remove ePic from ext-links
- ePIC is gone:
"The requested resource
/searchepic/summaryquery.do
is no longer available on this server and th... - 11:13 AM Revision 2c63e9ba (cdm-dataportal): ref #9792 update script to remove epic from stored settings
- 10:54 AM Revision cf1b2853 (cdm-dataportal): ref #9792 removing ePIC from ext-links
- 10:50 AM bug #8936 (Closed): Improve default distribution formatting
- done
- 10:50 AM Revision a8b43555 (cdm-dataportal): ref #8936 new default for level-0 item_glue
- 09:50 AM bug #9791 (New): Handle differing media meta data and informations in DB
- If media data of a media differs from the data in DB, we need a refresh button and a warning that the informations ar...
- 09:28 AM feature request #9054: Allow adding taxon descriptions to matrix for taxa which have no specimen descriptions attached yet
- As we are currently working on the matrix/additivity issues and as the Borsch workshop is coming closer we should try...
- 09:27 AM bug #9790 (Closed): Remove source mode "highest Status" from DDS Aggregation
- I tested in TaxEditor and it works as expected.
09/27/2021
- 05:27 PM bug #8936: Improve default distribution formatting
- Andreas Kohlbecker wrote:
> please can you clarify what exactly the conclusion is that results from the discussion i... - 04:41 PM bug #8936: Improve default distribution formatting
- please can you clarify what exactly the conclusion is that results from the discussion in comment #8936#note-19?
- 03:59 PM bug #9781: Merge of QuantitativeData or CategoricalData from Character Matrix should not create new records
- KL:
Das passiert im RowWrapper (setDataValueForQuantitativeData()) - 03:38 PM bug #9790 (Resolved): Remove source mode "highest Status" from DDS Aggregation
- Applied in changeset commit:cdmlib|ef92e1f650be6328f4e3d5b466169ce0f32c1d9d.
- 03:37 PM bug #9790 (Closed): Remove source mode "highest Status" from DDS Aggregation
- only highest status (or "OnlySameValue") should for now not be available for Descriptive Dataset aggregation.
We n... - 03:38 PM Revision ef92e1f6 (cdmlib): fix #9790 remove highest status only for DDS source aggregation
- 10:07 AM bug #9789 (New): Missing configurator when deleting a classification
- Similar to the deletion of nodes we need a configuration wizard for classifications.
- 09:51 AM Revision 7c78e6e0 (taxeditor): change color for overridden values
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