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From 09/12/2021 to 10/11/2021

10/11/2021

09:55 PM feature request #6818: Default Image Viewer: setting to enable display of 'Media Representations'
According to commit this was fixed in 4.9 Andreas Müller
09:49 PM bug #7979: Registration date and time, display
Can we adapt milestone or remove it? Andreas Müller
09:46 PM bug #4721 (Feedback): RestServices for list methods return error when index is out of range
Is this still an open issue? The above link seems to return a correct empty list now. Andreas Müller
09:10 PM bug #3635: Protologue media should also be displayed when mime type is missing
is this still an open issue? Andreas Müller
09:08 PM bug #3511: errors are not cleared after reloading the configuration
is this still an open issue? Andreas Müller
08:52 PM bug #2592 (Worksforme): InvalidDataAccessApiUsageException when saving description scope
I could save a scope for a description now so I guess this issue is solved in the meanwhile. Andreas Müller
08:15 PM bug #5484 (Worksforme): Connecting to local H2 via local Mgd throws NPE in CdmServiceCacher
I cannot reproduce therefore close as worksforme Andreas Müller
08:14 PM bug #5485 (Duplicate): h2 database connection fails if datasource view is open
This is either fixed already or will be fixed once #9742 is fixed. I tested with a workaround using AUTO_SERVER=TRUE Andreas Müller
08:01 PM feature request #9771 (In Progress): Implement Cdm2Cdm for vocabularies
Andreas Müller
05:05 PM bug #9807: Matrix should not collapse after aggregation
AM 2021-10-1:
... Wir müssten also entweder doch herausfinden, woran es liegt, dass diese zusätzlichen Knoten ents...
Andreas Müller
04:57 PM bug #9807 (Closed): Matrix should not collapse after aggregation
As the refresh after aggregation lead to row duplications (of taxa and maybe others) it was temporarily implemented i... Andreas Müller
04:37 PM feature request #8706 (Closed): taxeditor error report with timestamps
I guess we can close this ticket. Timestamping generally works. Open new ticket if there are open issues left. Andreas Müller
04:34 PM feature request #8467 (Closed): Save a "snapshot" of the SpecimenDescriptions used for aggregation
This for me seems to be fixed. Open issue on visibility of clones moved to new ticket #9806 Andreas Müller
04:32 PM bug #9806: Clones should not be editable in factual data view and elsewhere
AM: (2021-10-7)
Descriptions Clones, die an Specimens oder auch Taxa hängen sind derzeit noch normal bearbeitbar.
...
Andreas Müller
04:31 PM bug #9806 (Closed): Clones should not be editable in factual data view and elsewhere
copied from #8467:
Currently only aggregated data are not editable (depending on configuration). Also cloned data ...
Andreas Müller
04:04 PM feature request #7981 (Closed): Add configuration UI for matrix description aggregation
I created a ticket for old and new open issues: #9805 Andreas Müller
04:03 PM feature request #9805 (New): Open issues for DDS aggregation dialogue
copied from #7981
- ~~aggregating full dataset does not work~~ (#9803)
- ~~matrix should not collapse after aggre...
Andreas Müller
03:30 PM feature request #7980 (Closed): Enhance matrix description aggregation
Andreas Müller
03:27 PM feature request #7980: Enhance matrix description aggregation
open issues moved to #9804 Andreas Müller
03:27 PM feature request #9804 (New): Further enhance description aggregation
copied from #7980
- consider default values during aggregation
- deal with outliers etc.
- improve error and ...
Andreas Müller
02:33 PM feature request #9795 (Closed): Add literature descriptions to matrix aggregation
Andreas Müller
02:32 PM bug #9803: Aggregating full dataset does not work
Related to this I found that there is redundancy in the code. This lead to a failing fix for the rank handling as it ... Andreas Müller
12:53 PM bug #9803 (Closed): Aggregating full dataset does not work
Choosing "Aggregate all taxa of the descriptive datase" currently does not work.
This is because the dataset varia...
Andreas Müller
11:24 AM bug #9802 (New): Label for min=max does not unify values in Matrix QuantitativeData label provider
e.g. I get [987-987] instead.
Also the unit is missing.
In general we should try to unify the matrix label with...
Andreas Müller

10/08/2021

09:18 PM bug #9801 (New): Orphan removal does not work correctly for CdmLinkSource
as part of OriginalSourceBase. As it is 1:1 the mapping should be done the other way round to make orphan removal wor... Andreas Müller

10/07/2021

01:50 AM feature request #9795 (Resolved): Add literature descriptions to matrix aggregation
this is probably fully resolved Andreas Müller
01:49 AM task #8871 (In Progress): Remaining issues to unify description aggregation methods
Andreas Müller

10/06/2021

11:31 AM bug #9510 (In Progress): Improve label for descriptions created via DDS matrix
Andreas Müller
11:26 AM feature request #9511 (Resolved): Move specimens/individual associations for matrix into same description
This seems to be fixed in the meanwhile. Can you please double check and if true close the ticket?
If you find the...
Andreas Müller
09:26 AM bug #6523: Correct display of misspellings in synonymy
another example case from the carypophyllales portal:
----
ich habe eben gesehen, dass die misspellings im Po...
Andreas Kohlbecker

10/05/2021

01:35 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Can you please also leave a note which model objects have been replaced by this ticket?
>
...
Katja Luther
01:21 PM bug #9772 (Resolved): Improve DTO usage for character matrix
Code cleaning done for TaxonNodeService/Dao and DescriptiveDatasetService. Katja Luther
10:54 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Please check also if code is clean. E.g. I found DescriptiveDatasetService.getDescriptiveDat...
Katja Luther
08:45 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Same in TaxonNodeServiceImpl.getTaxonNodeDtos().
>
> By the way I wonder if all these HQL...
Katja Luther
09:40 AM bug #9800 (In Progress): Open issues for character matrix
* implement the details view again to be able to edit some more advanced data like the modifiers. This worked in earl... Katja Luther
09:40 AM bug #9799 (New): Details view should be available for character matrix
Implement the details view again to be able to edit some more advanced data like the modifiers. This worked in earlie... Katja Luther
09:30 AM bug #9073 (Worksforme): Configuring the matrix view throws HTTP invoker exception
could not reproduce this anymore, so close this ticket. Katja Luther
09:20 AM bug #8243: Cdm Cache uses a lot of disk space
We should have a look on this with the new implementation because the matrix worked with descriptions and descriptive... Katja Luther
08:56 AM bug #9074: Specimen missing a collector + n° and missing a collection identifier (Barcode, Accession number) not identifiable in descriptive Matrix
With the actual implementation the "collector & nr" field is always filled, if a field unit with collector and collec... Katja Luther

10/04/2021

04:34 PM bug #9772: Improve DTO usage for character matrix
Same in TaxonNodeServiceImpl.getTaxonNodeDtos().
By the way I wonder if all these HQL statements are necessary. Ha...
Andreas Müller
04:23 PM bug #9772: Improve DTO usage for character matrix
Please check also if code is clean. E.g. I found DescriptiveDatasetService.getDescriptiveDataSetDtoByUuid() which inc... Andreas Müller
04:01 PM bug #9772: Improve DTO usage for character matrix
Can you also check for other open matrix tickets and add the new tag "matrix" to them so we can check for all open ma... Andreas Müller
03:52 PM bug #9772: Improve DTO usage for character matrix
Generally we can close this ticket. Andreas Müller
03:52 PM bug #9772: Improve DTO usage for character matrix
Can you please also leave a note which model objects have been replaced by this ticket?
And can you check the (new...
Andreas Müller
03:50 PM bug #9772: Improve DTO usage for character matrix
This generally seems to work now as expected.
I guess we need to create a couple of follow-up tickets. I could thi...
Andreas Müller
02:24 PM bug #9772: Improve DTO usage for character matrix
Some more tests (with Lactucinae):
found two issues, both are already fixed:
* avoid NPE for quantitative data ...
Katja Luther
11:33 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Adding a new literature to a taxon does show the taxon row 2x if a specimen description for ...
Andreas Müller
11:30 AM bug #9772 (Feedback): Improve DTO usage for character matrix
Adding a new literature to a taxon does show the taxon row 2x if a specimen description for this taxon existed before... Andreas Müller
03:35 PM bug #9796 (Closed): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
the changes seem to solve the initialization problems without noticeable side-effects.
Andreas Kohlbecker
01:52 PM bug #9797 (Resolved): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
Andreas Kohlbecker

10/01/2021

10:32 AM feature request #9798: Import Spanish representations for countries
Import is prepared but still needs to run after the next release Andreas Müller
10:07 AM feature request #9798 (Resolved): Import Spanish representations for countries
Applied in changeset commit:cdmlib-apps|9920661b646173b407c80a48fba951c648f011fc. Andreas Müller
09:32 AM feature request #9798 (Closed): Import Spanish representations for countries
We can use the same code as for the German/Latin ranks written for edaphobase. Andreas Müller
08:56 AM bug #9797 (Closed): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
eg:
http://localhost:8080/portal/taxon/b384de9c-0a70-48e9-8fcc-1f772a331544.json
http://int.e-taxonomy.eu/cd...
Andreas Kohlbecker

09/30/2021

02:03 PM bug #9630: Make the handling of computed description configurable
Added check whether a d&d target is a computed description. Katja Luther
12:44 PM bug #9772 (Resolved): Improve DTO usage for character matrix
There are still two UI issues, the color of the field where a default description exists, changes (of the color) are ... Katja Luther
09:56 AM bug #9772 (In Progress): Improve DTO usage for character matrix
Katja Luther
09:56 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Katja Luther wrote:
> > need to be tested:
>
> what does this mean? Did you test it or i...
Katja Luther
09:35 AM bug #9772: Improve DTO usage for character matrix
Katja Luther wrote:
> need to be tested:
what does this mean? Did you test it or is it still to be done?
Andreas Müller
09:17 AM bug #9772: Improve DTO usage for character matrix
need to be tested:
* add new specimen, add character data -> save , add more character data -> save -> check for d...
Katja Luther

09/29/2021

04:11 PM bug #9796 (Resolved): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
Andreas Kohlbecker
03:51 PM bug #9796: LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
this is related to the changes made for #9433 ( commit:40708c6 ) Andreas Kohlbecker
03:13 PM bug #9796 (Closed): LazyInitializationException (LIE) on portal/taxon/{uuid} with misapplied names
eg:
http://test.e-taxonomy.eu/cdmserver/euromed/portal/taxon/e1688082-958a-4787-9afa-f46297920eee.json
htt...
Andreas Kohlbecker
03:46 PM feature request #8713 (Closed): Improve structured descriptive data aggregation
remaining issues handled in #7980 Andreas Müller
02:40 PM task #9123: Fix BigDecimal algebra in aggregation algorithms
Rounding in aggregation is now done using MathContext.DECIMAL32 and stripTrailingZeros(). This avoids rounding errors... Andreas Müller
11:49 AM task #9123 (In Progress): Fix BigDecimal algebra in aggregation algorithms
There is a problem with average computing in aggregation. RoundingMode is missing.
Once this is fixed we need to che...
Andreas Müller

09/28/2021

11:21 PM feature request #9795 (In Progress): Add literature descriptions to matrix aggregation
Andreas Müller
11:19 PM feature request #9795 (Closed): Add literature descriptions to matrix aggregation
copied from #7980 Andreas Müller
01:31 PM bug #9794 (Closed): external-links: World Flora Online link template improved
done! Andreas Kohlbecker
01:19 PM bug #9794 (Closed): external-links: World Flora Online link template improved
the external link to World Flora Online results in a too unspecific search and returns far too many results.
Eckha...
Andreas Kohlbecker
11:36 AM discussion #9793 (New): webservice versioning strategy
see
https://dzone.com/articles/rest-api-versioning-strategies-1
Andreas Kohlbecker
11:14 AM task #9792 (Closed): remove ePic from ext-links
Andreas Kohlbecker
10:52 AM task #9792 (Closed): remove ePic from ext-links
ePIC is gone:
"The requested resource
/searchepic/summaryquery.do
is no longer available on this server and th...
Andreas Kohlbecker
10:50 AM bug #8936 (Closed): Improve default distribution formatting
done Andreas Kohlbecker
09:50 AM bug #9791 (New): Handle differing media meta data and informations in DB
If media data of a media differs from the data in DB, we need a refresh button and a warning that the informations ar... Katja Luther
09:28 AM feature request #9054: Allow adding taxon descriptions to matrix for taxa which have no specimen descriptions attached yet
As we are currently working on the matrix/additivity issues and as the Borsch workshop is coming closer we should try... Andreas Müller
09:27 AM bug #9790 (Closed): Remove source mode "highest Status" from DDS Aggregation
I tested in TaxEditor and it works as expected. Andreas Müller

09/27/2021

05:27 PM bug #8936: Improve default distribution formatting
Andreas Kohlbecker wrote:
> please can you clarify what exactly the conclusion is that results from the discussion i...
Andreas Müller
04:41 PM bug #8936: Improve default distribution formatting
please can you clarify what exactly the conclusion is that results from the discussion in comment #8936#note-19?
Andreas Kohlbecker
03:59 PM bug #9781: Merge of QuantitativeData or CategoricalData from Character Matrix should not create new records
KL:
Das passiert im RowWrapper (setDataValueForQuantitativeData())
Andreas Müller
03:38 PM bug #9790 (Resolved): Remove source mode "highest Status" from DDS Aggregation
Applied in changeset commit:cdmlib|ef92e1f650be6328f4e3d5b466169ce0f32c1d9d. Andreas Müller
03:37 PM bug #9790 (Closed): Remove source mode "highest Status" from DDS Aggregation
only highest status (or "OnlySameValue") should for now not be available for Descriptive Dataset aggregation.
We n...
Andreas Müller
10:07 AM bug #9789 (New): Missing configurator when deleting a classification
Similar to the deletion of nodes we need a configuration wizard for classifications. Katja Luther

09/24/2021

07:28 PM feature request #7275 (In Progress): [DISCUSS] Require email address for Users
Andreas Müller
07:26 PM feature request #7276 (In Progress): Make User.email a unique field.
AM:
Eigentlich dachte ich ja wir können sie als rejected schließen. Aber das Thema uniquenes ist natürlich schon k...
Andreas Müller
05:58 PM feature request #9788 (New): Add full stop at the end of bibliographic reference citations in dataportal
AM:
zum Punkt hinter den Quellen: ich kann mich hier nicht mehr genau an die Entwicklung erinnern, aber ich glaube...
Andreas Müller
05:54 PM bug #8936: Improve default distribution formatting
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > The issue in #note-19 is still open. The suggestion is to rem...
Andreas Müller
01:46 PM bug #8936: Improve default distribution formatting
Andreas Müller wrote:
> The issue in #note-19 is still open. The suggestion is to remove Space and use Komma+Space i...
Andreas Kohlbecker
01:38 PM bug #8936 (Feedback): Improve default distribution formatting
The issue in #note-19 is still open. The suggestion is to remove Space and use Komma+Space instead for Level-0 item g... Andreas Müller
01:31 PM bug #8936 (Resolved): Improve default distribution formatting
1. I adapted the setting of the cuba test portal, so that it conforms to the production portal, the setting are now ... Andreas Kohlbecker
01:53 PM feature request #9787 (New): option to show external kml layers in the taxon/specimen page
Hello Andreas and Raúl,
[Raúl: I intercalated some questions below]
I had asked Raúl your question about the ma...
Andreas Kohlbecker
01:30 PM bug #9762 (Closed): Handle cultivars correctly in TaxEditor
This seems to be fully fixed now. Andreas Müller
11:57 AM bug #9762 (Feedback): Handle cultivars correctly in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > There is a single issue left. When switching back from ICNCP to ICN...
Andreas Müller
11:47 AM bug #9772 (Resolved): Improve DTO usage for character matrix
All open issues are fixed. Only new issue is the NPE when opening the aggregation. I will check this once the editor ... Andreas Müller
08:21 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Currently it looks like quantitative data characters which support >1 measurment units can n...
Katja Luther

09/23/2021

05:52 PM feature request #6640: Integrate RIS Import in taxEditor
KL 2017-05-12 (not sure if still an open issue):
der Ris Import funktioniert jetzt bei mir lokal im Editor.
Den ...
Andreas Müller
05:42 PM bug #9762 (Resolved): Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> There is a single issue left. When switching back from ICNCP to ICNAFP there comes a warning...
Katja Luther
01:29 PM bug #9762: Handle cultivars correctly in TaxEditor
There is a single issue left. When switching back from ICNCP to ICNAFP there comes a warning like:
![](picture728-...
Andreas Müller
01:17 PM bug #9762: Handle cultivars correctly in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > When selecting a rank in the combobox the rank shown below in the l...
Andreas Müller
01:15 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Ok, I found it. Fields that update the nameCache need an annotation @CacheUpdate("nameCache"...
Andreas Müller
09:03 AM bug #9762: Handle cultivars correctly in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > Andreas Müller wrote:
> > > > Works c...
Andreas Müller
08:43 AM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> When selecting a rank in the combobox the rank shown below in the list is selected and shown...
Katja Luther
08:36 AM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > Works correctly now except for 1 ope...
Katja Luther
05:32 PM bug #8936 (Feedback): Improve default distribution formatting
Andreas Müller
01:04 PM bug #8936: Improve default distribution formatting
In general I did not yet test other databases with status being shown. A reason was that I did not find the place whe... Andreas Müller
01:03 PM bug #8936: Improve default distribution formatting
Andreas Kohlbecker wrote:
> I changed the code a bit so that the item suffix is only added when there are not child-...
Andreas Müller
11:37 AM bug #8936: Improve default distribution formatting
AM:
wir arbeiten in diesem Release an der Optimierung des Verbreitungsstrings bezüglich Separatoren und Fußnoten. ...
Andreas Müller
11:16 AM bug #8936 (Resolved): Improve default distribution formatting
I changed the code a bit so that the item suffix is only added when there are not child-nodes.
Additionally, I als...
Andreas Kohlbecker
05:31 PM feature request #9780 (Closed): Split rank grex into grex (ICNCP) and grex (infraspec)
Reordering for existing terms will be done in #9784 Andreas Müller
05:28 PM feature request #6636: First version of RIS reference import (e.g. for Endnote import)
CY (full, place published) and PY (fix merge with DA, year) fixed in #9786 Andreas Müller
05:26 PM feature request #9786 (Resolved): Implement tags CY and fix PY handling for RIS import
Applied in changeset commit:cdmlib|d457f5b7c2f642f4c600124e9905ea01255645b4. Andreas Müller
03:26 PM feature request #9786 (Closed): Implement tags CY and fix PY handling for RIS import
follow up for #6636
CY (Place published) is not yet handled.
PY handling has a bug and is not yet used therefor...
Andreas Müller
02:43 PM bug #9772: Improve DTO usage for character matrix
Currently it looks like quantitative data characters which support >1 measurment units can not be opened in the popup... Andreas Müller
01:51 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> We will need an update script to try to update existing data (in greece-bupleurum there are ...
Andreas Müller
01:43 PM bug #9772: Improve DTO usage for character matrix
Katja Luther wrote:
> Andreas Müller wrote:
> > Values are not persisted when entered into a taxon description (lit...
Andreas Müller
11:15 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Values are not persisted when entered into a taxon description (literatur description or def...
Katja Luther
01:49 PM bug #9785 (Closed): Update script for missing measurment unit_ids (matrix)
for details see #9772#note-24
The problem existed already befor so there are lots of data with missing unit_id (e....
Andreas Müller
01:08 PM feature request #9778 (Closed): Add new rank terms lusus, subgrex and subproles
Andreas Müller
10:29 AM bug #9477 (Resolved): New ordered terms do not have correct order index
before closing check on production if it worked correctly. I already tested locally.
~~~
SELECT id, dtb.orderInde...
Andreas Müller
10:26 AM bug #9784 (New): Update script for term order of ordered CDM terms
copied from #9477
Termloader is fixed now but we still need to update order for already existing term which were l...
Andreas Müller

09/22/2021

08:02 PM bug #8936 (Feedback): Improve default distribution formatting
For a portal showing also the status in the distribution string this does not look so well yet
![](picture714-1.pn...
Andreas Müller
06:44 PM bug #9772: Improve DTO usage for character matrix
Values are not persisted when entered into a taxon description (literatur description or default description). Or may... Andreas Müller
06:27 PM bug #9772 (Feedback): Improve DTO usage for character matrix
Andreas Müller
06:26 PM bug #9772: Improve DTO usage for character matrix
If the unit is changed via the quantitative data editing dialog and persisted this change does not appear in the data... Andreas Müller
06:22 PM bug #9772: Improve DTO usage for character matrix
We will need an update script to try to update existing data (in greece-bupleurum there are 787 quantitative data wit... Andreas Müller
11:29 AM bug #9772 (Resolved): Improve DTO usage for character matrix
Save should not create new states or statistical values, but I think this is a new ticket because it is no regression... Katja Luther
09:03 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> The smv.type_id IS NULL issue seems to be solved now. But there is another critical issue: t...
Katja Luther
06:35 PM bug #9783 (New): When a new value is added to a quantitative data it should appear at the end
currently it appears at the beginning. But this is only the case for the current editing. When a other value is added... Andreas Müller
06:15 PM task #9782 (Closed): Adapt abbreviation and idInVoc for rank "proles"
Checked result in updated database. Andreas Müller
02:44 PM task #9782 (Resolved): Adapt abbreviation and idInVoc for rank "proles"
Andreas Müller
02:43 PM task #9782 (Closed): Adapt abbreviation and idInVoc for rank "proles"
AM:
wie ist denn die übliche Formatierung bei proles /subproles. Bislang haben wir das als „prol.“, also abgekürzt...
Andreas Müller
06:13 PM bug #9734 (Closed): Correct handling for secundum references when moving taxon to new parent
Works as expected now Andreas Müller
11:29 AM bug #9734 (Resolved): Correct handling for secundum references when moving taxon to new parent
I will test again with nightly when the test server is available again Katja Luther
11:20 AM bug #9734: Correct handling for secundum references when moving taxon to new parent
Tested locally (test server is unavailable):
pref: keepOrWarn
* if the secs the same -> ok
* if secs different -...
Katja Luther
04:58 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > Works correctly now except for 1 open issue: if cultivar epithet ...
Andreas Müller
04:56 PM bug #9762: Handle cultivars correctly in TaxEditor
When changing back from ICNCP to ICNAFP the rank list is not updated.
Also the currently selected rank is not remove...
Andreas Müller
04:52 PM bug #9762: Handle cultivars correctly in TaxEditor
When selecting a rank in the combobox the rank shown below in the list is selected and shown afterwards. The selectio... Andreas Müller
04:35 PM bug #9762 (Feedback): Handle cultivars correctly in TaxEditor
There was also another NPE that I fixed (careful with name.getRank().doSomething() !!) Andreas Müller
03:10 PM bug #9762 (Resolved): Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> >If ICNafp is selected do not show cultivar ranks
>
> I suggest to implement it like this...
Katja Luther
03:08 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> >If ICNafp is selected do not show cultivar ranks
>
> I suggest to implement it like this...
Katja Luther
03:08 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> This is decided now:
>
> * if "Grex (ICNCP)" is selected show "Cultivar Group"
this is...
Katja Luther
12:43 PM bug #9762: Handle cultivars correctly in TaxEditor
>If ICNafp is selected do not show cultivar ranks
I suggest to implement it like this for now
Andreas Müller
12:40 PM bug #9762: Handle cultivars correctly in TaxEditor
This is decided now:
* if "Grex (ICNCP)" is selected show "Cultivar Group"
Andreas Müller
12:38 PM bug #9762: Handle cultivars correctly in TaxEditor
New requirement:
* Rename Cultivar Name to Cultivar Epithet and Cultivar Group to Cultivar Group Epi. (to make it ...
Andreas Müller
09:58 AM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> There is the general issue that the details view does not update correctly when the nomencla...
Katja Luther
02:37 PM feature request #9755: Open issues for cultivar handling
AM
Denomination class:
Verstehe ich es richtig, dass das in der Regel Taxa vom Rang „Genus“ sind, und in seltenen...
Andreas Müller
02:33 PM feature request #9755: Open issues for cultivar handling
AM:
Verwendung von nom. Author and nom. Ref. (und evtl. andere Zusätze):
Article 28.2 verstehe ich so, dass ein A...
Andreas Müller
02:22 PM feature request #9755 (In Progress): Open issues for cultivar handling
The important issues have been fixed with 5.27 mostly using separate tickets. Andreas Müller
02:35 PM feature request #9757: Make cultivars, cultivar groups and grexes parsable
AM:
Arti. 21.18 nennt die erlaubten Zeichen für Kultivar-Epithete. Gelten diese Zeichen auch für Gruppen bzw. für ...
Andreas Müller
02:30 PM feature request #6387 (Resolved): [Rule] Rank rule for CultivarPlantNames
Andreas Müller
01:24 PM feature request #6387: [Rule] Rank rule for CultivarPlantNames
We will not handle convar. as cultivar rank.
WGB:
ja, ich würde convar. pragmatisch in die Liste der „alten bot...
Andreas Müller
01:44 PM bug #9781 (New): Merge of QuantitativeData or CategoricalData from Character Matrix should not create new records
Actually every merge of already existing but updated character data creates new states/statistical values and removes... Katja Luther
12:47 PM feature request #9754 (Closed): Adapt cache strategy to support cultivar names
Andreas Müller
12:26 PM feature request #9780 (Resolved): Split rank grex into grex (ICNCP) and grex (infraspec)
Andreas Müller
12:25 PM feature request #9780 (Closed): Split rank grex into grex (ICNCP) and grex (infraspec)
AM:
wir haben in letzter Zeit versucht das Handling (Parsen, Formattieren, Handling im TaxEditor) von Kultivaren e...
Andreas Müller
12:13 PM feature request #9778 (Resolved): Add new rank terms lusus, subgrex and subproles
Andreas Müller
10:43 AM feature request #9778 (Closed): Add new rank terms lusus, subgrex and subproles
About lusus:
Rangstufen: Die untenstehenden „Ränge“ fehlen in der normalen Tabelle („sublusus“ haben wir z.B.)...
Andreas Müller
11:25 AM bug #9779 (New): Exception when override db preference
copied from #9739:
When trying to override preference common name language via local settings I get:
~~~
org.e...
Katja Luther
11:22 AM bug #9739 (Closed): Add common name languages preference to DB preferences
create new ticket with the exception of comment 13 Katja Luther
10:29 AM task #8392 (Worksforme): Types in PhycoBank
Andreas Kohlbecker
08:32 AM task #8392 (Resolved): Types in PhycoBank
The displayed data are as expected. All issues are solved. The ticket can be closed. Wolf-Henning Kusber

09/21/2021

11:14 PM bug #9772: Improve DTO usage for character matrix
The smv.type_id IS NULL issue seems to be solved now. But there is another critical issue: the unit_id is often null ... Andreas Müller
03:56 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> There seems to be another issue: when I change only 1 record 8 new records are added in the ...
Katja Luther
11:10 PM task #3346 (Resolved): Team.addListenerForTeamMember(Person member) adds idle listener
Andreas Müller
10:48 PM bug #9762: Handle cultivars correctly in TaxEditor
There is the general issue that the details view does not update correctly when the nomenclatural code or ranks are c... Andreas Müller
10:42 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Works correctly now except for 1 open issue: if cultivar epithet or cultivar group are chang...
Andreas Müller
10:40 PM bug #9762: Handle cultivars correctly in TaxEditor
Works correctly now except for 1 open issue: if cultivar epithet or cultivar group are changed the name Cache and the... Andreas Müller
10:20 PM feature request #9754: Adapt cache strategy to support cultivar names
Only open issue is the correct handling of rank grex Andreas Müller
01:57 PM feature request #9754 (Resolved): Adapt cache strategy to support cultivar names
Not yet fully resolved but set to resolved to not forget Andreas Müller
10:18 PM feature request #9757 (Closed): Make cultivars, cultivar groups and grexes parsable
This should be fixed. Only correct usage of rank grex needs discussion but is handled in generell cultivar ticket #9755 Andreas Müller
01:56 PM feature request #9757 (Resolved): Make cultivars, cultivar groups and grexes parsable
Not yet fully resolved but set to resolved to not forget Andreas Müller
03:25 PM bug #825 (Closed): DefinedTermDaoImpl - missleading method names
fully solved Andreas Kohlbecker
03:18 PM bug #7904: DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() creates temporary Team objects which can not be garbage collected.
ahh this was solved for Release 5.25 Andreas Kohlbecker
03:18 PM bug #7904 (Closed): DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() creates temporary Team objects which can not be garbage collected.
code looks good. I also tested with yourkit, ticket can be closed. Andreas Kohlbecker
02:49 PM task #8392: Types in PhycoBank
Hi Hennig It ink this is all solved now and we can close this ticket as "worksforme" Andreas Kohlbecker
02:32 PM bug #9777 (New): TypeError: Argument 1 passed to cdm_tagged_text_add_options() in registration-search
http://edit.test/d7/phycobank/cdm_dataportal/registration-search/filter?identifier=&taxon_name=Mi&reference_citation=... Andreas Kohlbecker
02:16 PM feature request #9758 (Closed): EmailService implemented
implemented, covered by integration tests and not causing problem in existing apps -> can be closed Andreas Kohlbecker
02:05 PM task #8379 (Closed): Review strange specimen implementations
Andreas Kohlbecker
02:05 PM task #8379: Review strange specimen implementations
final check successful, can be closed, moving to the milestone for which this has been fixed: Release 5.18 Andreas Kohlbecker
01:58 PM task #7099 (Closed): Make CdmAuthority a persistable class
two more lines of doc and closing this ticket Andreas Kohlbecker
01:07 PM task #7099 (Resolved): Make CdmAuthority a persistable class
I added some javadoc. Please extend if you remember more details.
I implemented a first toString() method. Can be ...
Andreas Müller
11:34 AM task #7099 (Feedback): Make CdmAuthority a persistable class
the implementation looks good, I only got three opens points:
* Documentation is missing, I think only linking to ...
Andreas Kohlbecker
01:56 PM feature request #9755 (Resolved): Open issues for cultivar handling
Not yet fully resolved but set to resolved to not forget Andreas Müller
01:35 PM bug #9740 (Worksforme): Adapt Motive(Motif) to Subject in data portal
Ahh, sorry, this was a mistake from my side. It does not exist in the dataportals. Andreas Müller
10:44 AM bug #9740 (Feedback): Adapt Motive(Motif) to Subject in data portal
There is no such term in the dataportal code.
Please can you give an example for a dataportal page where this label ...
Andreas Kohlbecker
11:41 AM bug #8429 (Closed): Rename DeterminationEvent_Reference.setOfReferences_id
there are no indications of this problem in the log, so the issue is fixed for sure. Andreas Kohlbecker
10:08 AM bug #8936 (Closed): Improve default distribution formatting
As far as I remember the level-0 item glue ", " was needed in some cases where only one hierarchy level of area has ... Andreas Kohlbecker
09:32 AM feature request #3630: Taxeditor should add mimetype of mediaRepresentations automatically
As this is already partly implemented we probably only need to adapt the existing algorithm.
@Andreas K., as you h...
Andreas Müller
09:25 AM task #2452 (Duplicate): Media entities and Webpages
I think this is kind of a duplicate discussion of #9067. We decided there to keep the current data model and store me... Andreas Müller

09/20/2021

11:22 PM bug #9732 (In Progress): Open issues in specimen tree editor
Andreas Müller
11:18 PM bug #9762 (Feedback): Handle cultivars correctly in TaxEditor
Cultivar group should always appear while cultivar name should disappear if group (or grex) is selected. Currently it... Andreas Müller
11:17 PM bug #9762: Handle cultivars correctly in TaxEditor
Cultivar Group should appear **above** Cultivar Name Andreas Müller
11:15 PM bug #9762: Handle cultivars correctly in TaxEditor
Due to the above error (and maybe some similar errors) it is difficult to test.
Before passing back please do test...
Andreas Müller
11:09 PM bug #9762: Handle cultivars correctly in TaxEditor
I got NPE when changing to ICNCP:
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/rem...
Andreas Müller
11:04 PM bug #8936 (Feedback): Improve default distribution formatting
The new implementation looks very good and I guess the ticket can be closed.
The only thing I realized and was won...
Andreas Müller
10:19 PM bug #9734: Correct handling for secundum references when moving taxon to new parent
Can you please test all possible combinations on nightly and put the result of the test into this ticket? Andreas Müller
10:18 PM bug #9734 (Feedback): Correct handling for secundum references when moving taxon to new parent
This did not work for me. I did select "Keep if all related secs are the same, warn otherwise". I moved a taxon with ... Andreas Müller
10:03 PM bug #9772 (Feedback): Improve DTO usage for character matrix
There seems to be another issue: when I change only 1 record 8 new records are added in the DB but only 1 should be a... Andreas Müller
09:49 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> The error changed a bit but I still get an NPE regarding the StatMeasureValues.type:
I ch...
Andreas Müller
09:45 PM bug #9772: Improve DTO usage for character matrix
The error changed a bit but I still get an NPE regarding the StatMeasureValues.type:
~~~
last remote method : htt...
Andreas Müller
09:41 PM bug #9772: Improve DTO usage for character matrix
Katja Luther wrote:
> Andreas Müller wrote:
> > Changes in data do currently not get persisted
>
> Did you resta...
Andreas Müller
03:54 PM bug #9772: Improve DTO usage for character matrix
now the matrix is visible also in DDS perspective again. For whatever reason the problem seems to be solved. Andreas Müller
03:04 PM bug #9772 (Resolved): Improve DTO usage for character matrix
I put this to resolved as it is for review. Andreas Müller
02:54 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Changes in data do currently not get persisted
Did you restart the server?
Katja Luther
02:43 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Katja Luther wrote:
> > I also checked the actual nightly build and your test DB and all va...
Katja Luther
02:25 PM bug #9772: Improve DTO usage for character matrix
Changes in data do currently not get persisted Andreas Müller
02:08 PM bug #9772: Improve DTO usage for character matrix
I got when saving
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/common.ser...
Andreas Müller
02:04 PM bug #9772: Improve DTO usage for character matrix
Katja Luther wrote:
> I also checked the actual nightly build and your test DB and all values are shown.
>
> Now ...
Andreas Müller
01:45 PM bug #9772 (In Progress): Improve DTO usage for character matrix
Now DescriptiveDatasetDto is used and the rowWrapper uses DescriptionDtos as well. Katja Luther
01:43 PM bug #9772 (Closed): Improve DTO usage for character matrix
The character matrix still uses cdm objects for descriptive dataset and descriptions, we need to switch to DTOs as we... Katja Luther
04:45 PM bug #9776: Enforce cdm webservice access via https when pages are requested via this schema
The solution to this problem is to use https also for the "CDM web service URL".
This should be enforced automatical...
Andreas Kohlbecker
04:38 PM bug #9776 (Closed): Enforce cdm webservice access via https when pages are requested via this schema
Original subject "kml layer request for https page causes mixed content problem"
e.g. https://cichorieae.e-taxonom...
Andreas Kohlbecker
03:49 PM bug #9746 (Closed): Remove excluded and unplaced flags from right click menu
Seems to be fully fixed now. Andreas Müller
03:42 PM feature request #8028 (Closed): Better representation of web app media in the image gallery
I moved the open issues handling to new ticket #9775 Andreas Müller
03:25 PM feature request #8028: Better representation of web app media in the image gallery
please create a new ticket with the results of your experiments. Your findings need more time to discuss them properl... Andreas Kohlbecker
03:41 PM bug #9775 (New): Open issues for web app media in the image gallery
see #8028#note-18 ff for the open issues Andreas Müller
03:18 PM bug #9739: Add common name languages preference to DB preferences
Generally the functionality seems to work now and ticket can be closed. Andreas Müller
03:17 PM bug #9739 (Feedback): Add common name languages preference to DB preferences
When trying to override via local settings I get:
~~~
org.eclipse.core.runtime.AssertionFailedException: null arg...
Andreas Müller
09:19 AM bug #9739 (Resolved): Add common name languages preference to DB preferences
Andreas Müller wrote:
> Is this fixed already?
yes
Katja Luther
02:20 PM feature request #9774 (New): aggregate statistics on site visits (Piwik)
aggregate statistics one site visits are an important measure which has already been requested in #2379
matomo how...
Andreas Kohlbecker
02:14 PM task #9773 (New): Improve matomo performance
The matomo instance at https://cybertaxonomy.eu/piwik is extremely slow showing the overview dashboard for E+M fir ex... Andreas Kohlbecker
02:00 PM bug #9710 (Closed): DataIntegrityViolationException after adding a specimen to the matrix
further discussions on DTO handling were moved to #9772.
This ticket can be closed as it originally handles only t...
Andreas Müller
10:06 AM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
Andreas Müller wrote:
> I get the strange behavior that the matrix only shows the most left factual data column corr...
Katja Luther
10:51 AM task #2149 (Worksforme): implement test cases
tests are already implemented Andreas Kohlbecker
10:11 AM bug #4849: zen_basetheme custom icon size intially not recognized
still relevant and unsolved Andreas Kohlbecker

09/19/2021

10:01 PM bug #9739: Add common name languages preference to DB preferences
Is this fixed already? Andreas Müller

09/17/2021

11:56 PM feature request #9771 (Closed): Implement Cdm2Cdm for vocabularies
Needed for loading terms from term server and for moving the character ontology. Andreas Müller
11:52 PM bug #9346 (Closed): Adding specimen to character matrix fails sometimes
I tried to add the test specimen again and it worked. So I guess the ticket is correctly fixed. Andreas Müller
11:24 PM bug #9766: CDM vocabularies should not be editable
AM:
Wir könnten auch je Klasse ein cdmVocabularyUuids() einführen, die dann alle bekannten CDM VOC uuids zurückgib...
Andreas Müller
10:43 AM bug #9766 (Closed): CDM vocabularies should not be editable
this is already implemented for languages in #9747. We should implement it for all CDM vocabularies. Andreas Müller
11:16 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
I worked with 5.27.0.202109161022 beta as there is no newer version for nightly (build does not work). Also the curre... Andreas Müller
11:13 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
Also I get (during save I think, but not sure)
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/re...
Andreas Müller
10:34 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
I get the strange behavior that the matrix only shows the most left factual data column correctly. All other columns ... Andreas Müller
10:29 PM bug #9710 (Feedback): DataIntegrityViolationException after adding a specimen to the matrix
Playing around I got
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/taxonn...
Andreas Müller
10:16 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
Loading seems to be much faster now. Very good! Andreas Müller
09:56 PM bug #9710 (Resolved): DataIntegrityViolationException after adding a specimen to the matrix
I put this to resolved as it is easier to find during review this way. We may split the ticket after release if not f... Andreas Müller
09:08 PM feature request #8325 (In Progress): Create CDM Instance with all CDM core terms
Created database instance Andreas Müller
06:30 PM feature request #424: Implement advanced search
I marked those issues that seem to be fixed. Should we open new subtickets for the remaining issues? Andreas Müller
05:46 PM feature request #4118 (Feedback): @NotPartOf Annotation to exclude properties from the permission validation
Is this still an open issue?
I remember we had another solution for e.g. cache fields. We should link this solutio...
Andreas Müller
05:35 PM bug #4849: zen_basetheme custom icon size intially not recognized
This is not a cdmlib ticket.
Is it still an open issue?
Andreas Müller
05:14 PM task #2149 (Feedback): implement test cases
is this still an open issue? Andreas Müller
04:58 PM feature request #6963 (In Progress): Implement cache strategy for cultivar plant names (done), bacterial names, fungi, etc.
Cultivar names are mostly implemented, therefore set to "InProgress" Andreas Müller
04:52 PM feature request #8028: Better representation of web app media in the image gallery
Should we create new ticket(s) for the open issues or should we move this ticket to an upcoming milestone.
As it i...
Andreas Müller
04:49 PM bug #9730 (Closed): Open URL Button is disabled for persisted data
I tested and it works as expected. Andreas Müller
03:37 PM feature request #3990 (Closed): [DISCUSS] How to implement citation suggestion to each taxon
I think we can close this ticket as the source information is implemented as described via sec reference (former last... Andreas Müller
03:34 PM task #7369 (Closed): Handle taxonomically valueless taxa correctly
An example for a "valueless" taxon in CDM is https://www.europlusmed.org/cdm_dataportal/taxon/6a572ecd-f989-44a2-96ce... Andreas Müller
03:29 PM task #7346 (Closed): [CHECK] Use separate area vocabulary for common names
Andreas Müller
03:21 PM bug #7823 (Closed): User Persons are not deduplicated
This is fixed. No duplicate or unnecessary users were imported from BM. Though there are a couple of users representi... Andreas Müller
02:58 PM feature request #7801 (Closed): AM: Deduplicate references
The import did run long time ago. Deduplication was done as far as it was done. As we can't change much here other th... Andreas Müller
01:27 PM feature request #9770: Discuss symbols for (inverse) misapplications and pro parte synonyms
Andreas Müller wrote:
> Is there an example dataportal page for inverse pro parte synonyms or even partial synonyms?...
Andreas Müller
12:47 PM feature request #9770: Discuss symbols for (inverse) misapplications and pro parte synonyms
Is there an example dataportal page for inverse pro parte synonyms or even partial synonyms? Andreas Müller
12:46 PM feature request #9770 (New): Discuss symbols for (inverse) misapplications and pro parte synonyms
for discussions and examples see #7514
Current symbols for inverse MAN and pro parte synonyms are not very convinc...
Andreas Müller
12:50 PM bug #7514 (Closed): Change direct and inverse symbol for pro parte synonym and misapplied name relationship types.
The main task of this ticket has been fixed (invert symbols for MAN relationships).
The task to find better symbol...
Andreas Müller
12:48 PM bug #7514: Change direct and inverse symbol for pro parte synonym and misapplied name relationship types.
Andreas Kohlbecker wrote:
> the test page http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/t...
Andreas Müller
12:29 PM feature request #8004 (Closed): Add sortindex to description element
This has been implemented. Follow-up tickets for TaxEditor and dataportal have been created.
So I close this ticket.
Andreas Müller
12:27 PM feature request #9769 (New): Implement sortindex field for description elements in dataportal
for more details see #8004 Andreas Müller
12:24 PM feature request #9768 (New): Implement sortindex field for description elements in TaxEditor
For now it could look like this:
There is a label showing the current sortindex
e.g. "Order: 1"
with buttons...
Andreas Müller
12:11 PM feature request #7372 (Closed): Allow configuring feature/term tree
This flag is in use already and no problems occurred so far. So I think we can close this ticket. Andreas Müller
12:08 PM feature request #8006 (Closed): Improve labels for taxon relationships
Looks correct in production databases
~~~sql
SELECT r.text, r.abbreviatedLabel, r.label, r.plural, r.language_id,...
Andreas Müller
12:02 PM feature request #9767 (Duplicate): Improve labels for concept relationships
Upps, this duplicates #8007 Andreas Müller
12:01 PM feature request #9767 (Duplicate): Improve labels for concept relationships
In #8006 labels for taxon relationships like misapplied names or pro parte synonym relationships where updated correc... Andreas Müller
11:51 AM bug #9762 (Resolved): Handle cultivars correctly in TaxEditor
Now if ICNCP is selected only the cultivar ranks are available and the fields are displayed depending on the selected... Katja Luther
11:22 AM bug #8113 (Closed): Update TypeDesignationStatus labels
Not sure what this is really about except for the case issues handled in #9263.
Possible issues could be:
* Som...
Andreas Müller
10:59 AM feature request #7640: Update ISO country names where necessary
Andreas Müller wrote:
> @Henning: can you review after next release if everything works as expected for you?
... ...
Andreas Müller
10:56 AM feature request #7640: Update ISO country names where necessary
This should be fixed. Country names are up-to-date and labels are split into (common and short) labels and official l... Andreas Müller
10:48 AM bug #825: DefinedTermDaoImpl - missleading method names
This is fixed. Please review.
As the old method findByTitle which did override the same labeled parent method seem...
Andreas Müller
10:24 AM bug #825 (Resolved): DefinedTermDaoImpl - missleading method names
Applied in changeset commit:cdmlib|0dd6415a7665115b465b687879a987b7d70af7ed. Andreas Müller
10:45 AM feature request #9747 (Closed): Make languages editable in TaxEditor
This works as expected.
For the disabling of other CDM vocabularies I added a new ticket. If disabling was easy to...
Andreas Müller
10:35 AM bug #9759 (Closed): Person deduplication does not work due to new collectorTitleCache field
I tested in TaxEditor and it seems to work. Andreas Müller
09:36 AM bug #9237 (Closed): FeatureTree SortIndex updater creates wrong sortindex
I tested again and could not see any errors. So I close the ticket and move back to fixing milestone.
Reopen if is...
Andreas Müller
08:27 AM feature request #9761 (Closed): Add cultivarGroup as field for handling cultivar groups and grex
Andreas Müller
08:26 AM task #9752 (Closed): Import for Flora of Mexico
Andreas Müller

09/16/2021

03:44 PM feature request #9758 (Resolved): EmailService implemented
Applied in changeset commit:cdmlib|bcf94376128f49035cca1927d59e04c0016bdc7c. Andreas Kohlbecker
03:38 PM feature request #9758: EmailService implemented
the mail configuration section in a aspplication.properties file for the currently implemented `SendEmailConfigurer`
...
Andreas Kohlbecker
12:00 PM bug #9765 (Closed): external-links weight range too small and link fiels maxlength to small
Andreas Kohlbecker
11:44 AM bug #9765 (Closed): external-links weight range too small and link fiels maxlength to small
Andreas Kohlbecker
09:50 AM feature request #7640 (Resolved): Update ISO country names where necessary
Andreas Müller

09/15/2021

11:04 PM feature request #4209 (In Progress): Better handling of labels, abbreviations and descriptions in ISO 3166-1 (country) terms
Andreas Müller
04:50 PM bug #9764 (Closed): external-links form misses category field
Andreas Kohlbecker
04:12 PM bug #9764 (Closed): external-links form misses category field
add a field for category with auto suggest combobox Andreas Kohlbecker
04:10 PM bug #9763 (Closed): adding new external link broken
Andreas Kohlbecker
04:09 PM bug #9763 (Resolved): adding new external link broken
Applied in changeset commit:cdm-dataportal|3700d60368ddb0b49899cbfbdb59e6a7b5999306. Andreas Kohlbecker
03:58 PM bug #9763 (Closed): adding new external link broken
adding a new external link fails with a WSOD Andreas Kohlbecker
03:48 PM feature request #9761 (In Progress): Add cultivarGroup as field for handling cultivar groups and grex
Andreas Müller
01:55 PM feature request #9761 (Closed): Add cultivarGroup as field for handling cultivar groups and grex
This is needed as in cultivar names the cultivar epithet can exist together with cultivar group epithet and/or grex e... Andreas Müller
03:45 PM bug #9762 (Closed): Handle cultivars correctly in TaxEditor
copied from #9755
* If ICNCP is selected make only cultivar ranks (#6387) available
* If a cultivar rank is selec...
Andreas Müller
01:43 PM bug #9760 (Closed): image gallery shows webapp icons instead of thumbnails
Andreas Kohlbecker
01:42 PM bug #9760 (Resolved): image gallery shows webapp icons instead of thumbnails
Applied in changeset commit:cdm-dataportal|c2162a7475c7dac6d90a663403cc23a6be054a75. Andreas Kohlbecker
01:41 PM bug #9760 (Closed): image gallery shows webapp icons instead of thumbnails
see :
![](picture950-1.png)
Andreas Kohlbecker
10:56 AM bug #9759 (Resolved): Person deduplication does not work due to new collectorTitleCache field
Applied in changeset commit:cdmlib|7cb329fc60af691dd901f0cfb66bad9307cbc0ae. Andreas Müller
10:36 AM bug #9759 (Closed): Person deduplication does not work due to new collectorTitleCache field
... also check if this is the case for nomenclaturalTitleCache Andreas Müller
10:36 AM feature request #9747: Make languages editable in TaxEditor
The doubled separators are removed. Please review. Katja Luther
10:35 AM feature request #9747: Make languages editable in TaxEditor
Andreas Müller wrote:
> The menu for vocabularies and term trees should use the same order. Please move the "languag...
Katja Luther
10:35 AM feature request #9747: Make languages editable in TaxEditor
Andreas Müller wrote:
> Functionallity works and ticket can be closed.
>
> However, the Language class has 1 more...
Katja Luther
10:34 AM feature request #9747 (Resolved): Make languages editable in TaxEditor
Applied in changeset commit:taxeditor|5cabd426f71e5cc0254e32e414ff7afc26b92ed5. Katja Luther
09:52 AM feature request #9747: Make languages editable in TaxEditor
Andreas Müller wrote:
> According to commit 53e555624aa688 there is lots of commented code now in OpenDefinedTermEdi...
Katja Luther

09/14/2021

09:52 PM bug #8936: Improve default distribution formatting
Do you have some example links on test server? Andreas Müller
09:51 PM feature request #9747: Make languages editable in TaxEditor
According to commit 53e555624aa688 there is lots of commented code now in OpenDefinedTermEditorHandlerE4.java . Can t... Andreas Müller
09:49 PM feature request #9747: Make languages editable in TaxEditor
Functionallity works and ticket can be closed.
However, the Language class has 1 more attribute iso639_1 which ref...
Andreas Müller
09:44 PM feature request #9747: Make languages editable in TaxEditor
Minor issue:
There is a separator below "New" but no other group or item:
![](picture451-1.png)
Can we remov...
Andreas Müller
09:34 PM feature request #9747 (Feedback): Make languages editable in TaxEditor
The menu for vocabularies and term trees should use the same order. Please move the "language" menu item to the same ... Andreas Müller
10:43 AM feature request #9747: Make languages editable in TaxEditor
Now the implementation uses the cdmVocabularyUuid method. Katja Luther
09:32 PM feature request #7646 (Closed): Implement parser and formatter for "hort."
I tested in editor and it also works there. So I close the ticket. Andreas Müller
09:18 PM task #9744: Find suitable name for the Freetext- or Name-Editor
HOORAY !!!!! Andreas Kohlbecker
09:12 PM task #9744 (Closed): Find suitable name for the Freetext- or Name-Editor
We decided to use "Taxon Editor" for the formerly labeled "Name Editor" and not to change "bulk editor" labels for no... Andreas Müller
09:10 PM task #9744 (Resolved): Find suitable name for the Freetext- or Name-Editor
WGB:
einverstanden, das ist eine gute Lösung, ich wäre nicht für „Freetext“.
Eine Frage wäre noch, ob wir bei „B...
Andreas Müller
04:37 PM feature request #9757 (In Progress): Make cultivars, cultivar groups and grexes parsable
Andreas Müller
09:47 AM feature request #9757 (Closed): Make cultivars, cultivar groups and grexes parsable
See http://www.actahort.org/chronica/pdf/sh_10.pdf
Allowed characters: Art. 21.18
Andreas Müller
04:14 PM feature request #6387: [Rule] Rank rule for CultivarPlantNames
On convar see https://github.com/tdwg/tnc/blob/master/tcs-deconstructed/TaxonomicRank.md#taxonomicrankcultivatedplant... Andreas Müller
03:17 PM feature request #9758 (In Progress): EmailService implemented
Andreas Kohlbecker
03:17 PM feature request #9758: EmailService implemented
We can use the `org.springframework.mail.javamail.JavaMailSenderImpl` instead of implementing our own service Andreas Kohlbecker
03:10 PM feature request #9758 (Closed): EmailService implemented
A service to send emails
Configuration of the following properties should be possible via a Spring-PropertySource:...
Andreas Kohlbecker
02:56 PM feature request #9755 (In Progress): Open issues for cultivar handling
Existing cases:
~~~
SELECT *
FROM TaxonName tn INNER JOIN DefinedTermBase r ON r.id = tn.rank_id
WHERE r.uuid =...
Andreas Müller
11:05 AM bug #9452 (Closed): Name Type Editor: allowed combination of fields
Andreas Kohlbecker
10:54 AM bug #9452: Name Type Editor: allowed combination of fields
Works as expected, the bug is fixed, fine. Ticket can be closed. Wolf-Henning Kusber
11:04 AM feature request #9706 (Closed): Name Editor for Sections: show simple form for in-authors without full citation
Andreas Kohlbecker
10:59 AM feature request #9706: Name Editor for Sections: show simple form for in-authors without full citation
Works as expected. Ticket can be closed. Wolf-Henning Kusber

09/13/2021

02:07 PM bug #8936 (Resolved): Improve default distribution formatting
please review
Andreas Kohlbecker
02:07 PM bug #8936: Improve default distribution formatting
The following portals need to be checked after the release:
~~http://portal.cybertaxonomy.org/diptera/~~ ':
~~htt...
Andreas Kohlbecker
01:41 PM bug #8936: Improve default distribution formatting
New parameter `item_suffix` with default value "`: `" Andreas Kohlbecker
01:36 PM bug #8936 (In Progress): Improve default distribution formatting
need to solve #9756 in the context of this ticket since the issues are more closely related than initially assumed Andreas Kohlbecker
08:45 AM bug #8936 (Closed): Improve default distribution formatting
Andreas Kohlbecker
08:44 AM bug #8936 (Resolved): Improve default distribution formatting
Applied in changeset commit:cdm-dataportal|abf4371572af20f9f408c45fc893b75695fb169e. Andreas Kohlbecker
01:43 PM bug #9756 (Duplicate): Footnote key placement in hierarchical distributions improved
closing as duplicate of #8936 Andreas Kohlbecker
08:35 AM bug #9756 (Duplicate): Footnote key placement in hierarchical distributions improved
See:
![](picture317-1.png)
the footnote key should come before the colon
Example: https://132.248.13.83/cd...
Andreas Kohlbecker
01:20 PM feature request #9747: Make languages editable in TaxEditor
To add the language editor can be done in 5 minutes, but to allow the editing for non cdm languages and do not allow ... Katja Luther
01:17 PM feature request #9747 (Resolved): Make languages editable in TaxEditor
Applied in changeset commit:taxeditor|53e555624aa688350d4c89e43e8a3f172e534022. Katja Luther
 

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