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From 08/29/2021 to 09/27/2021

09/27/2021

05:27 PM bug #8936: Improve default distribution formatting
Andreas Kohlbecker wrote:
> please can you clarify what exactly the conclusion is that results from the discussion i...
Andreas Müller
04:41 PM bug #8936: Improve default distribution formatting
please can you clarify what exactly the conclusion is that results from the discussion in comment #8936#note-19?
Andreas Kohlbecker
03:59 PM bug #9781: Merge of QuantitativeData or CategoricalData from Character Matrix should not create n...
KL:
Das passiert im RowWrapper (setDataValueForQuantitativeData())
Andreas Müller
03:38 PM bug #9790 (Resolved): Remove source mode "highest Status" from DDS Aggregation
Applied in changeset commit:cdmlib|ef92e1f650be6328f4e3d5b466169ce0f32c1d9d. Andreas Müller
03:37 PM bug #9790 (Closed): Remove source mode "highest Status" from DDS Aggregation
only highest status (or "OnlySameValue") should for now not be available for Descriptive Dataset aggregation.
We n...
Andreas Müller
03:38 PM Revision ef92e1f6 (cdmlib): fix #9790 remove highest status only for DDS source aggregation
Andreas Müller
10:07 AM bug #9789 (New): Missing configurator when deleting a classification
Similar to the deletion of nodes we need a configuration wizard for classifications. Katja Luther
09:51 AM Revision 7c78e6e0 (taxeditor): change color for overridden values
Katja Luther

09/24/2021

07:28 PM feature request #7275 (In Progress): [DISCUSS] Require email address for Users
Andreas Müller
07:26 PM feature request #7276 (In Progress): Make User.email a unique field.
AM:
Eigentlich dachte ich ja wir können sie als rejected schließen. Aber das Thema uniquenes ist natürlich schon k...
Andreas Müller
05:58 PM feature request #9788 (New): Add full stop at the end of bibliographic reference citations in dat...
AM:
zum Punkt hinter den Quellen: ich kann mich hier nicht mehr genau an die Entwicklung erinnern, aber ich glaube...
Andreas Müller
05:54 PM bug #8936: Improve default distribution formatting
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > The issue in #note-19 is still open. The suggestion is to rem...
Andreas Müller
01:46 PM bug #8936: Improve default distribution formatting
Andreas Müller wrote:
> The issue in #note-19 is still open. The suggestion is to remove Space and use Komma+Space i...
Andreas Kohlbecker
01:38 PM bug #8936 (Feedback): Improve default distribution formatting
The issue in #note-19 is still open. The suggestion is to remove Space and use Komma+Space instead for Level-0 item g... Andreas Müller
01:31 PM bug #8936 (Resolved): Improve default distribution formatting
1. I adapted the setting of the cuba test portal, so that it conforms to the production portal, the setting are now ... Andreas Kohlbecker
02:49 PM Revision ae115efe (cdmlib): code cleaning
Katja Luther
01:53 PM feature request #9787 (New): option to show external kml layers in the taxon/specimen page
Hello Andreas and Raúl,
[Raúl: I intercalated some questions below]
I had asked Raúl your question about the ma...
Andreas Kohlbecker
01:30 PM bug #9762 (Closed): Handle cultivars correctly in TaxEditor
This seems to be fully fixed now. Andreas Müller
11:57 AM bug #9762 (Feedback): Handle cultivars correctly in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > There is a single issue left. When switching back from ICNCP to ICN...
Andreas Müller
12:05 PM Revision 4451d6c9 (taxeditor): ref #9762: adapt l18n strings
Katja Luther
11:47 AM bug #9772 (Resolved): Improve DTO usage for character matrix
All open issues are fixed. Only new issue is the NPE when opening the aggregation. I will check this once the editor ... Andreas Müller
08:21 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Currently it looks like quantitative data characters which support >1 measurment units can n...
Katja Luther
11:39 AM Revision 41fe4def (taxeditor): ref #9772: avoid NPE in aggregation handler - continue
Katja Luther
11:12 AM Revision 2c37ed60 (taxeditor): ref #9772: avoid NPE in aggregation handler
Katja Luther
09:56 AM Revision e719e550 (cdmlib): ref #9772: fix problems with more than one description for one taxon
Katja Luther

09/23/2021

05:52 PM feature request #6640: Integrate RIS Import in taxEditor
KL 2017-05-12 (not sure if still an open issue):
der Ris Import funktioniert jetzt bei mir lokal im Editor.
Den ...
Andreas Müller
05:42 PM bug #9762 (Resolved): Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> There is a single issue left. When switching back from ICNCP to ICNAFP there comes a warning...
Katja Luther
01:29 PM bug #9762: Handle cultivars correctly in TaxEditor
There is a single issue left. When switching back from ICNCP to ICNAFP there comes a warning like:
![](picture728-...
Andreas Müller
01:17 PM bug #9762: Handle cultivars correctly in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > When selecting a rank in the combobox the rank shown below in the l...
Andreas Müller
01:15 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Ok, I found it. Fields that update the nameCache need an annotation @CacheUpdate("nameCache"...
Andreas Müller
09:03 AM bug #9762: Handle cultivars correctly in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > Andreas Müller wrote:
> > > > Works c...
Andreas Müller
08:43 AM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> When selecting a rank in the combobox the rank shown below in the list is selected and shown...
Katja Luther
08:36 AM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > Works correctly now except for 1 ope...
Katja Luther
05:32 PM bug #8936 (Feedback): Improve default distribution formatting
Andreas Müller
01:04 PM bug #8936: Improve default distribution formatting
In general I did not yet test other databases with status being shown. A reason was that I did not find the place whe... Andreas Müller
01:03 PM bug #8936: Improve default distribution formatting
Andreas Kohlbecker wrote:
> I changed the code a bit so that the item suffix is only added when there are not child-...
Andreas Müller
11:37 AM bug #8936: Improve default distribution formatting
AM:
wir arbeiten in diesem Release an der Optimierung des Verbreitungsstrings bezüglich Separatoren und Fußnoten. ...
Andreas Müller
11:16 AM bug #8936 (Resolved): Improve default distribution formatting
I changed the code a bit so that the item suffix is only added when there are not child-nodes.
Additionally, I als...
Andreas Kohlbecker
05:31 PM feature request #9780 (Closed): Split rank grex into grex (ICNCP) and grex (infraspec)
Reordering for existing terms will be done in #9784 Andreas Müller
05:28 PM feature request #6636: First version of RIS reference import (e.g. for Endnote import)
CY (full, place published) and PY (fix merge with DA, year) fixed in #9786 Andreas Müller
05:26 PM feature request #9786 (Resolved): Implement tags CY and fix PY handling for RIS import
Applied in changeset commit:cdmlib|d457f5b7c2f642f4c600124e9905ea01255645b4. Andreas Müller
03:26 PM feature request #9786 (Closed): Implement tags CY and fix PY handling for RIS import
follow up for #6636
CY (Place published) is not yet handled.
PY handling has a bug and is not yet used therefor...
Andreas Müller
05:26 PM Revision d457f5b7 (cdmlib): fix #9786 implement CY and fix PY for RIS import (and fix Source hand...
Andreas Müller
05:16 PM Revision bb25976f (taxeditor): ref #9772: fix handling when more than 1 unit is choosable - continue
Katja Luther
04:22 PM Revision 49fee2fb (cdmlib): ref #9772: avoid another NPE
Katja Luther
03:21 PM Revision 638120c2 (taxeditor): ref 9762: adapt message when cultivar epithets are removed.
Katja Luther
02:56 PM Revision 9740c8f1 (cdmlib): Cleanup RIS and Endnote tests
Andreas Müller
02:43 PM bug #9772: Improve DTO usage for character matrix
Currently it looks like quantitative data characters which support >1 measurment units can not be opened in the popup... Andreas Müller
01:51 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> We will need an update script to try to update existing data (in greece-bupleurum there are ...
Andreas Müller
01:43 PM bug #9772: Improve DTO usage for character matrix
Katja Luther wrote:
> Andreas Müller wrote:
> > Values are not persisted when entered into a taxon description (lit...
Andreas Müller
11:15 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Values are not persisted when entered into a taxon description (literatur description or def...
Katja Luther
01:56 PM Revision 8b7732ac (taxeditor): ref #9772: fix handling when more than 1 unit is choosable - continue
Katja Luther
01:50 PM Revision 6bcb1685 (cdmlib): ref #9772: avoid NPE
Katja Luther
01:49 PM bug #9785 (In Progress): Update script for missing unit_ids (matrix)
for details see #9772#note-24
The problem existed already befor so there are lots of data with missing unit_id (e....
Andreas Müller
01:48 PM Revision 446189d9 (taxeditor): ref #9772: fix handling when more than 1 unit is choosable
Katja Luther
01:08 PM feature request #9778 (Closed): Add new rank terms lusus, subgrex and subproles
Andreas Müller
01:06 PM Revision f263ddd1 (cdmlib): ref #6387 add code validation for cultivar group epi
Andreas Müller
11:03 AM Revision cbefe788 (cdm-dataportal): ref #8936 item-suffix only when child-nodes exist
Andreas Kohlbecker
11:03 AM Revision c4f29439 (cdmlib): ref #9772: fix getting taxonRowWrapper - continue
Katja Luther
10:32 AM Revision e1fef636 (cdmlib): ref #9772: fix getting taxonRowWrapper
Katja Luther
10:29 AM bug #9477 (Resolved): New ordered terms do not have correct order index
before closing check on production if it worked correctly. I already tested locally.
~~~
SELECT id, dtb.orderInde...
Andreas Müller
10:26 AM bug #9784 (New): Update script for term order of ordered CDM terms
copied from #9477
Termloader is fixed now but we still need to update order for already existing term which were l...
Andreas Müller
10:22 AM Revision 749a2e19 (cdmlib): ref #9477 fix term loading for ordered new terms
Andreas Müller
09:45 AM Revision 0a5a166c (cdmlib): fix incorrect previousUpdater info in 5.27.0_5.27.1
Andreas Müller
09:23 AM Revision ab600885 (taxeditor): ref #9762: fix problems with rank combo and switch nomenclatural code
Katja Luther
09:02 AM Revision 0ea0fdd3 (cdmlib): ref #9762, ref #9755 Add nameCache annotation to cultivar fields
Andreas Müller

09/22/2021

08:02 PM bug #8936 (Feedback): Improve default distribution formatting
For a portal showing also the status in the distribution string this does not look so well yet
![](picture714-1.pn...
Andreas Müller
07:03 PM Revision cff67eb2 (cdmlib): ref #9778, ref #9782 fix parsing for (sub)proles
Andreas Müller
06:44 PM bug #9772: Improve DTO usage for character matrix
Values are not persisted when entered into a taxon description (literatur description or default description). Or may... Andreas Müller
06:27 PM bug #9772 (Feedback): Improve DTO usage for character matrix
Andreas Müller
06:26 PM bug #9772: Improve DTO usage for character matrix
If the unit is changed via the quantitative data editing dialog and persisted this change does not appear in the data... Andreas Müller
06:22 PM bug #9772: Improve DTO usage for character matrix
We will need an update script to try to update existing data (in greece-bupleurum there are 787 quantitative data wit... Andreas Müller
11:29 AM bug #9772 (Resolved): Improve DTO usage for character matrix
Save should not create new states or statistical values, but I think this is a new ticket because it is no regression... Katja Luther
09:03 AM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> The smv.type_id IS NULL issue seems to be solved now. But there is another critical issue: t...
Katja Luther
06:35 PM bug #9783 (New): When a new value is added to a quantitative data it should appear at the end
currently it appears at the beginning. But this is only the case for the current editing. When a other value is added... Andreas Müller
06:15 PM task #9782 (Closed): Adapt abbreviation and idInVoc for rank "proles"
Checked result in updated database. Andreas Müller
02:44 PM task #9782 (Resolved): Adapt abbreviation and idInVoc for rank "proles"
Andreas Müller
02:43 PM task #9782 (Closed): Adapt abbreviation and idInVoc for rank "proles"
AM:
wie ist denn die übliche Formatierung bei proles /subproles. Bislang haben wir das als „prol.“, also abgekürzt...
Andreas Müller
06:13 PM bug #9734 (Closed): Correct handling for secundum references when moving taxon to new parent
Works as expected now Andreas Müller
11:29 AM bug #9734 (Resolved): Correct handling for secundum references when moving taxon to new parent
I will test again with nightly when the test server is available again Katja Luther
11:20 AM bug #9734: Correct handling for secundum references when moving taxon to new parent
Tested locally (test server is unavailable):
pref: keepOrWarn
* if the secs the same -> ok
* if secs different -...
Katja Luther
05:57 PM Revision 2f1d896d (cdmlib): ref #9757 add test for parsing into existing name
Andreas Müller
05:56 PM Revision de0abe03 (cdmlib): ref #9754 fix tests
Andreas Müller
05:32 PM Revision 1c0ec33b (cdmlib): ref #9754 fix appended phrase handling in cultivar formatter (cont.)
Andreas Müller
05:26 PM Revision b58adaec (cdmlib): ref #9754 fix appended phrase handling in cultivar formatter
Andreas Müller
04:58 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > Works correctly now except for 1 open issue: if cultivar epithet ...
Andreas Müller
04:56 PM bug #9762: Handle cultivars correctly in TaxEditor
When changing back from ICNCP to ICNAFP the rank list is not updated.
Also the currently selected rank is not remove...
Andreas Müller
04:52 PM bug #9762: Handle cultivars correctly in TaxEditor
When selecting a rank in the combobox the rank shown below in the list is selected and shown afterwards. The selectio... Andreas Müller
04:35 PM bug #9762 (Feedback): Handle cultivars correctly in TaxEditor
There was also another NPE that I fixed (careful with name.getRank().doSomething() !!) Andreas Müller
03:10 PM bug #9762 (Resolved): Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> >If ICNafp is selected do not show cultivar ranks
>
> I suggest to implement it like this...
Katja Luther
03:08 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> >If ICNafp is selected do not show cultivar ranks
>
> I suggest to implement it like this...
Katja Luther
03:08 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> This is decided now:
>
> * if "Grex (ICNCP)" is selected show "Cultivar Group"
this is...
Katja Luther
12:43 PM bug #9762: Handle cultivars correctly in TaxEditor
>If ICNafp is selected do not show cultivar ranks
I suggest to implement it like this for now
Andreas Müller
12:40 PM bug #9762: Handle cultivars correctly in TaxEditor
This is decided now:
* if "Grex (ICNCP)" is selected show "Cultivar Group"
Andreas Müller
12:38 PM bug #9762: Handle cultivars correctly in TaxEditor
New requirement:
* Rename Cultivar Name to Cultivar Epithet and Cultivar Group to Cultivar Group Epi. (to make it ...
Andreas Müller
09:58 AM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> There is the general issue that the details view does not update correctly when the nomencla...
Katja Luther
04:48 PM Revision d0deb3b0 (cdmlib): ref #9755 add DENOMINATIONCLASS to isCultivar()
Andreas Müller
04:26 PM Revision d29fd8e4 (taxeditor): ref #9762 fix NPE in cultivar handling
Andreas Müller
03:09 PM Revision 7a2e68e9 (taxeditor): ref #9762: smaller changes for cultivar names
Katja Luther
02:58 PM Revision df18f369 (cdmlib): ref #9782 adapt abbreviation for proles - adapt tests
Andreas Müller
02:44 PM Revision 35146960 (cdmlib): ref #9782 adapt abbreviation for proles
Andreas Müller
02:37 PM feature request #9755: Open issues for cultivar handling
AM
Denomination class:
Verstehe ich es richtig, dass das in der Regel Taxa vom Rang „Genus“ sind, und in seltenen...
Andreas Müller
02:33 PM feature request #9755: Open issues for cultivar handling
AM:
Verwendung von nom. Author and nom. Ref. (und evtl. andere Zusätze):
Article 28.2 verstehe ich so, dass ein A...
Andreas Müller
02:22 PM feature request #9755 (In Progress): Open issues for cultivar handling
The important issues have been fixed with 5.27 mostly using separate tickets. Andreas Müller
02:35 PM feature request #9757: Make cultivars, cultivar groups and grexes parsable
AM:
Arti. 21.18 nennt die erlaubten Zeichen für Kultivar-Epithete. Gelten diese Zeichen auch für Gruppen bzw. für ...
Andreas Müller
02:30 PM feature request #6387 (Resolved): [Rule] Rank rule for CultivarPlantNames
Andreas Müller
01:24 PM feature request #6387: [Rule] Rank rule for CultivarPlantNames
We will not handle convar. as cultivar rank.
WGB:
ja, ich würde convar. pragmatisch in die Liste der „alten bot...
Andreas Müller
02:29 PM Revision f112ee1f (cdmlib): fix CdmUpdater to correct version
Andreas Müller
02:14 PM Revision dacb2825 (cdmlib): ref #9755 update script for grex infraspec. representation
Andreas Müller
02:05 PM Revision af10946c (cdmlib): ref #6387 test that convar is not a cultivar
Andreas Müller
02:04 PM Revision 9752a045 (cdmlib): ref #9771Additional ignore on seupClass, just in case
Andreas Müller
01:44 PM bug #9781 (New): Merge of QuantitativeData or CategoricalData from Character Matrix should not cr...
Actually every merge of already existing but updated character data creates new states/statistical values and removes... Katja Luther
01:19 PM Revision 24d1dcbf (taxeditor): ref #9762: remove cultivar ranks for non cultivar codes and use is...
Katja Luther
01:18 PM Revision 6a5d2783 (taxeditor): ref #9734: add missing brackets to condition
Katja Luther
12:47 PM feature request #9754 (Closed): Adapt cache strategy to support cultivar names
Andreas Müller
12:45 PM Revision bd349938 (cdmlib): ref #9771 first incomplete version of Cdm2CdmVocabularyImport (cont.)
Andreas Müller
12:26 PM feature request #9780 (Resolved): Split rank grex into grex (ICNCP) and grex (infraspec)
Andreas Müller
12:25 PM feature request #9780 (Closed): Split rank grex into grex (ICNCP) and grex (infraspec)
AM:
wir haben in letzter Zeit versucht das Handling (Parsen, Formattieren, Handling im TaxEditor) von Kultivaren e...
Andreas Müller
12:20 PM Revision 6825968d (cdmlib): cleanup
Andreas Müller
12:19 PM Revision 8876144e (cdmlib): ref #9771 first incomplete version of Cdm2CdmVocabularyImport
Andreas Müller
12:13 PM feature request #9778 (Resolved): Add new rank terms lusus, subgrex and subproles
Andreas Müller
10:43 AM feature request #9778 (Closed): Add new rank terms lusus, subgrex and subproles
About lusus:
Rangstufen: Die untenstehenden „Ränge“ fehlen in der normalen Tabelle („sublusus“ haben wir z.B.)...
Andreas Müller
12:04 PM Revision 9585c46e (cdmlib): ref #9778, ref #9755, ref #9754, ref # 9757 split grex and add new ra...
Andreas Müller
11:25 AM bug #9779 (New): Exception when override db preference
copied from #9739:
When trying to override preference common name language via local settings I get:
~~~
org.e...
Katja Luther
11:22 AM bug #9739 (Closed): Add common name languages preference to DB preferences
create new ticket with the exception of comment 13 Katja Luther
10:34 AM Revision f73004b4 (taxeditor): ref #9734: adapt message
Katja Luther
10:29 AM task #8392 (Worksforme): Types in PhycoBank
Andreas Kohlbecker
08:32 AM task #8392 (Resolved): Types in PhycoBank
The displayed data are as expected. All issues are solved. The ticket can be closed. Wolf-Henning Kusber
09:11 AM Revision 7a8c920c (cdmlib): ref #9772: fix missing unit
Katja Luther

09/21/2021

11:14 PM bug #9772: Improve DTO usage for character matrix
The smv.type_id IS NULL issue seems to be solved now. But there is another critical issue: the unit_id is often null ... Andreas Müller
03:56 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> There seems to be another issue: when I change only 1 record 8 new records are added in the ...
Katja Luther
11:10 PM task #3346 (Resolved): Team.addListenerForTeamMember(Person member) adds idle listener
Andreas Müller
10:48 PM bug #9762: Handle cultivars correctly in TaxEditor
There is the general issue that the details view does not update correctly when the nomenclatural code or ranks are c... Andreas Müller
10:42 PM bug #9762: Handle cultivars correctly in TaxEditor
Andreas Müller wrote:
> Works correctly now except for 1 open issue: if cultivar epithet or cultivar group are chang...
Andreas Müller
10:40 PM bug #9762: Handle cultivars correctly in TaxEditor
Works correctly now except for 1 open issue: if cultivar epithet or cultivar group are changed the name Cache and the... Andreas Müller
10:44 PM Revision d5fbdca7 (cdmlib): ref #9754 handle infraspecific epithets better
Andreas Müller
10:20 PM feature request #9754: Adapt cache strategy to support cultivar names
Only open issue is the correct handling of rank grex Andreas Müller
01:57 PM feature request #9754 (Resolved): Adapt cache strategy to support cultivar names
Not yet fully resolved but set to resolved to not forget Andreas Müller
10:18 PM feature request #9757 (Closed): Make cultivars, cultivar groups and grexes parsable
This should be fixed. Only correct usage of rank grex needs discussion but is handled in generell cultivar ticket #9755 Andreas Müller
01:56 PM feature request #9757 (Resolved): Make cultivars, cultivar groups and grexes parsable
Not yet fully resolved but set to resolved to not forget Andreas Müller
10:10 PM Revision 9d8aa1aa (cdmlib): ref #9754 handle null values for cultivar epis better
Andreas Müller
09:52 PM Revision fe699834 (cdmlib): cleanup
Andreas Müller
08:59 PM Revision 12ffe453 (cdmlib): ref #9757 fix emptying name before parsing
Andreas Müller
08:41 PM Revision 11fb1cef (taxeditor): ref #9762 fix NPE in cultivar handling
Andreas Müller
08:05 PM Revision c03313e2 (cdmlib): ref #9757 fix cultivar parser test
Andreas Müller
07:56 PM Revision ad3aa7ba (cdmlib): ref #9754 support author and nom. ref. handling for cultivar formatting
Andreas Müller
07:33 PM Revision 446e5712 (cdmlib): ref #9757 improve cultivar parser
* parse with referencedName()
* include author parsing
* include nom. ref. parsing
Andreas Müller
07:33 PM Revision 26a096a2 (cdmlib): cleanup
Andreas Müller
04:02 PM Revision 2966c278 (cdmlib): ref #9772: smaller changes
Katja Luther
03:42 PM Revision 83db01f8 (cdmlib): ref #9772: deproxy the term in getTermByClassAndUUID
Katja Luther
03:25 PM bug #825 (Closed): DefinedTermDaoImpl - missleading method names
fully solved Andreas Kohlbecker
03:18 PM bug #7904: DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() creates temporary...
ahh this was solved for Release 5.25 Andreas Kohlbecker
03:18 PM bug #7904 (Closed): DerivedUnitFacadeFieldUnitCacheStrategy.getCollectorAndFieldNumber() creates ...
code looks good. I also tested with yourkit, ticket can be closed. Andreas Kohlbecker
02:49 PM task #8392: Types in PhycoBank
Hi Hennig It ink this is all solved now and we can close this ticket as "worksforme" Andreas Kohlbecker
02:32 PM bug #9777 (New): TypeError: Argument 1 passed to cdm_tagged_text_add_options() in registration-se...
http://edit.test/d7/phycobank/cdm_dataportal/registration-search/filter?identifier=&taxon_name=Mi&reference_citation=... Andreas Kohlbecker
02:16 PM feature request #9758 (Closed): EmailService implemented
implemented, covered by integration tests and not causing problem in existing apps -> can be closed Andreas Kohlbecker
02:05 PM task #8379 (Closed): Review strange specimen implementations
Andreas Kohlbecker
02:05 PM task #8379: Review strange specimen implementations
final check successful, can be closed, moving to the milestone for which this has been fixed: Release 5.18 Andreas Kohlbecker
01:58 PM task #7099 (Closed): Make CdmAuthority a persistable class
two more lines of doc and closing this ticket Andreas Kohlbecker
01:07 PM task #7099 (Resolved): Make CdmAuthority a persistable class
I added some javadoc. Please extend if you remember more details.
I implemented a first toString() method. Can be ...
Andreas Müller
11:34 AM task #7099 (Feedback): Make CdmAuthority a persistable class
the implementation looks good, I only got three opens points:
* Documentation is missing, I think only linking to ...
Andreas Kohlbecker
01:57 PM Revision a15be025 (cdmlib): ref #7099 documentation on the intendet purpose of CdmAuthority
Andreas Kohlbecker
01:56 PM feature request #9755 (Resolved): Open issues for cultivar handling
Not yet fully resolved but set to resolved to not forget Andreas Müller
01:35 PM bug #9740 (Worksforme): Adapt Motive(Motif) to Subject in data portal
Ahh, sorry, this was a mistake from my side. It does not exist in the dataportals. Andreas Müller
10:44 AM bug #9740 (Feedback): Adapt Motive(Motif) to Subject in data portal
There is no such term in the dataportal code.
Please can you give an example for a dataportal page where this label ...
Andreas Kohlbecker
01:04 PM Revision b4a56647 (cdmlib): ref #7099 javadoc added to CdmAuthority
Andreas Müller
12:44 PM Revision 73e39cab (cdmlib): ref #7099 implement toString and isEqual for CdmAuthority
Andreas Müller
12:30 PM Revision 55d06011 (cdmlib): cleanup
Andreas Müller
11:41 AM bug #8429 (Closed): Rename DeterminationEvent_Reference.setOfReferences_id
there are no indications of this problem in the log, so the issue is fixed for sure. Andreas Kohlbecker
11:38 AM Revision 68935150 (taxeditor): add specimen id to specimen selection dialog of character matrix
Katja Luther
11:15 AM Revision c58ab5d6 (taxeditor): ref #9762: avoid NPE
Katja Luther
10:08 AM bug #8936 (Closed): Improve default distribution formatting
As far as I remember the level-0 item glue ", " was needed in some cases where only one hierarchy level of area has ... Andreas Kohlbecker
09:51 AM Revision fd550079 (taxeditor): ref #9084 fix German translation for description delete config label
Andreas Müller
09:42 AM Revision 44490676 (taxeditor): ref #9732 change Motif to Subject in TaxEditor
Andreas Müller
09:32 AM feature request #3630: Taxeditor should add mimetype of mediaRepresentations automatically
As this is already partly implemented we probably only need to adapt the existing algorithm.
@Andreas K., as you h...
Andreas Müller
09:25 AM task #2452 (Duplicate): Media entities and Webpages
I think this is kind of a duplicate discussion of #9067. We decided there to keep the current data model and store me... Andreas Müller
09:20 AM Revision a1fd4a9b (taxeditor): ref #9762: cultivar group for cultivar and cultivar group and rank...
Katja Luther
08:57 AM Revision 3487252c (taxeditor): add correct handling for keepOrWarn when moving taxa
Katja Luther

09/20/2021

11:22 PM bug #9732 (In Progress): Open issues in specimen tree editor
Andreas Müller
11:18 PM bug #9762 (Feedback): Handle cultivars correctly in TaxEditor
Cultivar group should always appear while cultivar name should disappear if group (or grex) is selected. Currently it... Andreas Müller
11:17 PM bug #9762: Handle cultivars correctly in TaxEditor
Cultivar Group should appear **above** Cultivar Name Andreas Müller
11:15 PM bug #9762: Handle cultivars correctly in TaxEditor
Due to the above error (and maybe some similar errors) it is difficult to test.
Before passing back please do test...
Andreas Müller
11:09 PM bug #9762: Handle cultivars correctly in TaxEditor
I got NPE when changing to ICNCP:
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/rem...
Andreas Müller
11:04 PM bug #8936 (Feedback): Improve default distribution formatting
The new implementation looks very good and I guess the ticket can be closed.
The only thing I realized and was won...
Andreas Müller
10:34 PM Revision 6c55c1d0 (cdm-dataportal): ref #9776 enfocing https for webservice requests and notifyin...
Andreas Kohlbecker
10:32 PM Revision d907a8c6 (cdm-dataportal): adapting test to shorter term labels
Andreas Kohlbecker
10:19 PM bug #9734: Correct handling for secundum references when moving taxon to new parent
Can you please test all possible combinations on nightly and put the result of the test into this ticket? Andreas Müller
10:18 PM bug #9734 (Feedback): Correct handling for secundum references when moving taxon to new parent
This did not work for me. I did select "Keep if all related secs are the same, warn otherwise". I moved a taxon with ... Andreas Müller
10:03 PM bug #9772 (Feedback): Improve DTO usage for character matrix
There seems to be another issue: when I change only 1 record 8 new records are added in the DB but only 1 should be a... Andreas Müller
09:49 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> The error changed a bit but I still get an NPE regarding the StatMeasureValues.type:
I ch...
Andreas Müller
09:45 PM bug #9772: Improve DTO usage for character matrix
The error changed a bit but I still get an NPE regarding the StatMeasureValues.type:
~~~
last remote method : htt...
Andreas Müller
09:41 PM bug #9772: Improve DTO usage for character matrix
Katja Luther wrote:
> Andreas Müller wrote:
> > Changes in data do currently not get persisted
>
> Did you resta...
Andreas Müller
03:54 PM bug #9772: Improve DTO usage for character matrix
now the matrix is visible also in DDS perspective again. For whatever reason the problem seems to be solved. Andreas Müller
03:04 PM bug #9772 (Resolved): Improve DTO usage for character matrix
I put this to resolved as it is for review. Andreas Müller
02:54 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Changes in data do currently not get persisted
Did you restart the server?
Katja Luther
02:43 PM bug #9772: Improve DTO usage for character matrix
Andreas Müller wrote:
> Katja Luther wrote:
> > I also checked the actual nightly build and your test DB and all va...
Katja Luther
02:25 PM bug #9772: Improve DTO usage for character matrix
Changes in data do currently not get persisted Andreas Müller
02:08 PM bug #9772: Improve DTO usage for character matrix
I got when saving
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/common.ser...
Andreas Müller
02:04 PM bug #9772: Improve DTO usage for character matrix
Katja Luther wrote:
> I also checked the actual nightly build and your test DB and all values are shown.
>
> Now ...
Andreas Müller
01:45 PM bug #9772 (In Progress): Improve DTO usage for character matrix
Now DescriptiveDatasetDto is used and the rowWrapper uses DescriptionDtos as well. Katja Luther
01:43 PM bug #9772 (Closed): Improve DTO usage for character matrix
The character matrix still uses cdm objects for descriptive dataset and descriptions, we need to switch to DTOs as we... Katja Luther
04:45 PM bug #9776: Enforce cdm websservice access via https when pages are requested via this schema
The solution to this problem is to use https also for the "CDM web service URL".
This should be enforced automatical...
Andreas Kohlbecker
04:38 PM bug #9776 (New): Enforce cdm websservice access via https when pages are requested via this schema
Original subject "kml layer request for https page causes mixed content problem"
e.g. https://cichorieae.e-taxonom...
Andreas Kohlbecker
03:49 PM bug #9746 (Closed): Remove excluded and unplaced flags from right click menu
Seems to be fully fixed now. Andreas Müller
03:42 PM feature request #8028 (Closed): Better representation of web app media in the image gallery
I moved the open issues handling to new ticket #9775 Andreas Müller
03:25 PM feature request #8028: Better representation of web app media in the image gallery
please create a new ticket with the results of your experiments. Your findings need more time to discuss them properl... Andreas Kohlbecker
03:41 PM bug #9775 (New): Open issues for web app media in the image gallery
see #8028#note-18 ff for the open issues Andreas Müller
03:18 PM bug #9739: Add common name languages preference to DB preferences
Generally the functionality seems to work now and ticket can be closed. Andreas Müller
03:17 PM bug #9739 (Feedback): Add common name languages preference to DB preferences
When trying to override via local settings I get:
~~~
org.eclipse.core.runtime.AssertionFailedException: null arg...
Andreas Müller
09:19 AM bug #9739 (Resolved): Add common name languages preference to DB preferences
Andreas Müller wrote:
> Is this fixed already?
yes
Katja Luther
02:20 PM feature request #9774 (New): aggregate statistics on site visits (Piwik)
aggregate statistics one site visits are an important measure which has already been requested in #2379
matomo how...
Andreas Kohlbecker
02:14 PM task #9773 (New): Improve matomo performance
The matomo instance at https://cybertaxonomy.eu/piwik is extremely slow showing the overview dashboard for E+M fir ex... Andreas Kohlbecker
02:00 PM bug #9710 (Closed): DataIntegrityViolationException after adding a specimen to the matrix
further discussions on DTO handling were moved to #9772.
This ticket can be closed as it originally handles only t...
Andreas Müller
10:06 AM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
Andreas Müller wrote:
> I get the strange behavior that the matrix only shows the most left factual data column corr...
Katja Luther
01:56 PM Revision faf98509 (taxeditor): ref #9746: also remove doubtful menu entry
Katja Luther
01:47 PM Revision e128bbe9 (taxeditor): ref #9772: adapt QuantitativeDataDialogComposite to dto usage
Katja Luther
10:51 AM task #2149 (Worksforme): implement test cases
tests are already implemented Andreas Kohlbecker
10:11 AM bug #4849: zen_basetheme custom icon size intially not recognized
still relevant and unsolved Andreas Kohlbecker
10:11 AM Revision 10f4a3fd (cdmlib): ref #9710: avoid NPEs
Katja Luther
10:05 AM Revision 353c0eee (cdmlib): ref #9758 application.properties for the production environement
Andreas Kohlbecker
09:19 AM Revision 32854562 (taxeditor): remove flag handler from fragment.e4xmi
Katja Luther

09/19/2021

10:01 PM bug #9739: Add common name languages preference to DB preferences
Is this fixed already? Andreas Müller

09/17/2021

11:56 PM feature request #9771 (In Progress): Implement Cdm2Cdm for vocabularies
Needed for loading terms from term server and for moving the character ontology. Andreas Müller
11:52 PM bug #9346 (Closed): Adding specimen to character matrix fails sometimes
I tried to add the test specimen again and it worked. So I guess the ticket is correctly fixed. Andreas Müller
11:24 PM bug #9766: CDM vocabularies should not be editable
AM:
Wir könnten auch je Klasse ein cdmVocabularyUuids() einführen, die dann alle bekannten CDM VOC uuids zurückgib...
Andreas Müller
10:43 AM bug #9766 (New): CDM vocabularies should not be editable
this is already implemented for languages in #9747. We should implement it for all CDM vocabularies. Andreas Müller
11:16 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
I worked with 5.27.0.202109161022 beta as there is no newer version for nightly (build does not work). Also the curre... Andreas Müller
11:13 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
Also I get (during save I think, but not sure)
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/re...
Andreas Müller
10:34 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
I get the strange behavior that the matrix only shows the most left factual data column correctly. All other columns ... Andreas Müller
10:29 PM bug #9710 (Feedback): DataIntegrityViolationException after adding a specimen to the matrix
Playing around I got
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/taxonn...
Andreas Müller
10:16 PM bug #9710: DataIntegrityViolationException after adding a specimen to the matrix
Loading seems to be much faster now. Very good! Andreas Müller
09:56 PM bug #9710 (Resolved): DataIntegrityViolationException after adding a specimen to the matrix
I put this to resolved as it is easier to find during review this way. We may split the ticket after release if not f... Andreas Müller
09:08 PM feature request #8325 (In Progress): Create CDM Instance with all CDM core terms
Created database instance Andreas Müller
09:04 PM Revision 03e65c4a (taxeditor): rename taxonomic tree to ... trees
Andreas Müller
06:30 PM feature request #424: implement advanced search
I marked those issues that seem to be fixed. Should we open new subtickets for the remaining issues? Andreas Müller
05:46 PM feature request #4118 (Feedback): @NotPartOf Annotation to exclude properties from the permission...
Is this still an open issue?
I remember we had another solution for e.g. cache fields. We should link this solutio...
Andreas Müller
05:35 PM bug #4849: zen_basetheme custom icon size intially not recognized
This is not a cdmlib ticket.
Is it still an open issue?
Andreas Müller
05:14 PM task #2149 (Feedback): implement test cases
is this still an open issue? Andreas Müller
05:00 PM Revision 7c1827b5 (cdmlib-apps): ref #9755 adapt app-import to new cultivar epithet naming
Andreas Müller
04:58 PM feature request #6963 (In Progress): Implement cache strategy for cultivar plant names (done), ba...
Cultivar names are mostly implemented, therefore set to "InProgress" Andreas Müller
04:52 PM feature request #8028: Better representation of web app media in the image gallery
Should we create new ticket(s) for the open issues or should we move this ticket to an upcoming milestone.
As it i...
Andreas Müller
04:49 PM bug #9730 (Closed): Open URL Button is disabled for persisted data
I tested and it works as expected. Andreas Müller
03:37 PM feature request #3990 (Closed): [DISCUSS] How to implement citation suggestion to each taxon
I think we can close this ticket as the source information is implemented as described via sec reference (former last... Andreas Müller
03:34 PM task #7369 (Closed): Handle taxonomically valueless taxa correctly
An example for a "valueless" taxon in CDM is https://www.europlusmed.org/cdm_dataportal/taxon/6a572ecd-f989-44a2-96ce... Andreas Müller
03:29 PM task #7346 (Closed): [CHECK] Use separate area vocabulary for common names
Andreas Müller
03:21 PM bug #7823 (Closed): User Persons are not deduplicated
This is fixed. No duplicate or unnecessary users were imported from BM. Though there are a couple of users representi... Andreas Müller
02:58 PM feature request #7801 (Closed): AM: Deduplicate references
The import did run long time ago. Deduplication was done as far as it was done. As we can't change much here other th... Andreas Müller
01:27 PM feature request #9770: Discuss symbols for (inverse) misapplications and pro parte synonyms
Andreas Müller wrote:
> Is there an example dataportal page for inverse pro parte synonyms or even partial synonyms?...
Andreas Müller
12:47 PM feature request #9770: Discuss symbols for (inverse) misapplications and pro parte synonyms
Is there an example dataportal page for inverse pro parte synonyms or even partial synonyms? Andreas Müller
12:46 PM feature request #9770 (New): Discuss symbols for (inverse) misapplications and pro parte synonyms
for discussions and examples see #7514
Current symbols for inverse MAN and pro parte synonyms are not very convinc...
Andreas Müller
12:50 PM bug #7514 (Closed): Change direct and inverse symbol for pro parte synonym and misapplied name re...
The main task of this ticket has been fixed (invert symbols for MAN relationships).
The task to find better symbol...
Andreas Müller
12:48 PM bug #7514: Change direct and inverse symbol for pro parte synonym and misapplied name relationshi...
Andreas Kohlbecker wrote:
> the test page http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/t...
Andreas Müller
12:29 PM feature request #8004 (Closed): Add sortindex to description element
This has been implemented. Follow-up tickets for TaxEditor and dataportal have been created.
So I close this ticket.
Andreas Müller
12:27 PM feature request #9769 (New): Implement sortindex field for description elements in dataportal
for more details see #8004 Andreas Müller
12:24 PM feature request #9768 (New): Implement sortindex field for description elements in TaxEditor
For now it could look like this:
There is a label showing the current sortindex
e.g. "Order: 1"
with buttons...
Andreas Müller
12:11 PM feature request #7372 (Closed): Allow configuring feature/term tree
This flag is in use already and no problems occurred so far. So I think we can close this ticket. Andreas Müller
12:08 PM feature request #8006 (Closed): Improve labels for taxon relationships
Looks correct in production databases
~~~sql
SELECT r.text, r.abbreviatedLabel, r.label, r.plural, r.language_id,...
Andreas Müller
12:02 PM feature request #9767 (Duplicate): Improve labels for concept relationships
Upps, this duplicates #8007 Andreas Müller
12:01 PM feature request #9767 (Duplicate): Improve labels for concept relationships
In #8006 labels for taxon relationships like misapplied names or pro parte synonym relationships where updated correc... Andreas Müller
11:51 AM bug #9762 (Resolved): Handle cultivars correctly in TaxEditor
Now if ICNCP is selected only the cultivar ranks are available and the fields are displayed depending on the selected... Katja Luther
11:22 AM bug #8113 (Closed): Update TypeDesignationStatus labels
Not sure what this is really about except for the case issues handled in #9263.
Possible issues could be:
* Som...
Andreas Müller
10:59 AM feature request #7640: Update ISO country names where necessary
Andreas Müller wrote:
> @Henning: can you review after next release if everything works as expected for you?
... ...
Andreas Müller
10:56 AM feature request #7640: Update ISO country names where necessary
This should be fixed. Country names are up-to-date and labels are split into (common and short) labels and official l... Andreas Müller
10:56 AM Revision f4caff64 (taxeditor): ref #9762: handle cultivars correctly in tax editor
Katja Luther
10:49 AM Revision f7b7b300 (taxeditor): rename feature tree to term trees
Katja Luther
10:48 AM bug #825: DefinedTermDaoImpl - missleading method names
This is fixed. Please review.
As the old method findByTitle which did override the same labeled parent method seem...
Andreas Müller
10:24 AM bug #825 (Resolved): DefinedTermDaoImpl - missleading method names
Applied in changeset commit:cdmlib|0dd6415a7665115b465b687879a987b7d70af7ed. Andreas Müller
10:47 AM Revision 30023bc4 (taxeditor): ref #6774: fix export wizard for owl export
Katja Luther
10:45 AM feature request #9747 (Closed): Make languages editable in TaxEditor
This works as expected.
For the disabling of other CDM vocabularies I added a new ticket. If disabling was easy to...
Andreas Müller
10:35 AM bug #9759 (Closed): Person deduplication does not work due to new collectorTitleCache field
I tested in TaxEditor and it seems to work. Andreas Müller
10:24 AM Revision 0dd6415a (cdmlib): fix #825 rename method that searches by representation label in term dao
Andreas Müller
10:23 AM Revision 998924cb (cdmlib): minor
Andreas Müller
10:00 AM Revision bbfc0e17 (cdmlib): cleanup
Andreas Müller
10:00 AM Revision 4e69f890 (cdmlib): ref #9014 allow any word with number as detail in parser
Andreas Müller
09:36 AM bug #9237 (Closed): FeatureTree SortIndex updater creates wrong sortindex
I tested again and could not see any errors. So I close the ticket and move back to fixing milestone.
Reopen if is...
Andreas Müller
08:27 AM feature request #9761 (Closed): Add cultivarGroup as field for handling cultivar groups and grex
Andreas Müller
08:26 AM task #9752 (Closed): Import for Flora of Mexico
Andreas Müller
08:25 AM Revision 1b9f0b93 (cdmlib-apps): ref #9752 add mexico reference updater and mexico datasource
Andreas Müller
07:52 AM Revision 74d2984c (cdmlib): cleanup
Andreas Müller
07:50 AM Revision 3ca53aa1 (cdmlib): cleanup
Andreas Müller
07:26 AM Revision ba7678ee (cdmlib): ref #9758 try to fix dependency issue in mailing test dependencies
Andreas Müller
07:04 AM Revision 38455235 (cdmlib): cleanup
Andreas Müller

09/16/2021

05:10 PM Revision 3ac9e408 (cdmlib): ref #9758 option to define custom configurations in test and producti...
Andreas Kohlbecker
04:40 PM Revision 82da5e6c (cdmlib): ref #9758 configuration for sending emails with smtp properties
Andreas Kohlbecker
03:44 PM feature request #9758 (Resolved): EmailService implemented
Applied in changeset commit:cdmlib|bcf94376128f49035cca1927d59e04c0016bdc7c. Andreas Kohlbecker
03:38 PM feature request #9758: EmailService implemented
the mail configuration section in a aspplication.properties file for the currently implemented `SendEmailConfigurer`
...
Andreas Kohlbecker
03:44 PM Revision bcf94376 (cdmlib): fix #9758 configuration for sending emails with JavaMailSenderImpl
Andreas Kohlbecker
03:44 PM Revision 1574f983 (cdmlib): note on manual anttask execution
Andreas Kohlbecker
12:02 PM Revision 26557b05 (cdmlib): update cached cdm mapping to 5.27.0
Andreas Müller
12:00 PM bug #9765 (Closed): external-links weight range too small and link fiels maxlength to small
Andreas Kohlbecker
11:44 AM bug #9765 (Closed): external-links weight range too small and link fiels maxlength to small
Andreas Kohlbecker
11:54 AM Revision 1ef72ae8 (cdm-dataportal): Merge tag '5.26.7' into develop
tagging HFX Andreas Kohlbecker
11:54 AM Revision ebdf90b5 (cdm-dataportal): Merge branch 'hotfix/5.26.7'
Andreas Kohlbecker
11:54 AM Revision cac6121d (cdm-dataportal): ref #9765 bigger weight range for ext-links and more allowed ...
Andreas Kohlbecker
11:54 AM Revision 5683cde6 (cdm-dataportal): bigger weight range for ext-links
Andreas Kohlbecker
11:53 AM Revision d9086dd9 (cdm-dataportal): ref #9765 bigger weight range for ext-links and more allowed ...
Andreas Kohlbecker
11:40 AM Revision 15dfa454 (cdm-dataportal): bigger weight range for ext-links
Andreas Kohlbecker
11:35 AM Revision c0e9dfbb (taxeditor): ref #9755 adapt taxeditor to cultivarEpi changes
Andreas Müller
11:13 AM Revision 9f8cc8f0 (taxeditor): update taxeditor test H2 to 5.27.0
Andreas Müller
11:11 AM Revision 2d40c638 (cdm-vaadin): update vaadin to 5.27.0
Andreas Müller
11:09 AM Revision 04429991 (cdmlib): update cdmlib test H2 to 5.27.0
Andreas Müller
11:08 AM Revision ae57f5e3 (cdm-dataportal): Merge tag '5.26.6' into develop
tagging hotfix Andreas Kohlbecker
11:08 AM Revision cf62482d (cdm-dataportal): Merge branch 'hotfix/5.26.6'
Andreas Kohlbecker
11:08 AM Revision 588e5e89 (cdm-dataportal): fix #9763 adapting broken exist function to new data scheme
Andreas Kohlbecker
11:04 AM Revision 1684fbfa (cdmlib): minor
Andreas Müller
11:01 AM Revision a1646aec (cdmlib): change to model version 5.27.0
Andreas Müller
11:01 AM Revision a0c48c4a (cdmlib): ref #9761 move cultivar info to new group field where necessary
Andreas Müller
11:01 AM Revision 388be066 (cdmlib): ref #7640 fix update script for ISO country update
Andreas Müller
11:01 AM Revision 6cfc0581 (cdmlib): ref #9755 update cultivarName->cultivarEpithet
Andreas Müller
11:01 AM Revision 58a72ae6 (cdmlib): ref #7640 include titleCache for country label update
Andreas Müller
11:01 AM Revision 3ded2197 (cdmlib): ref #9757 fix cultivar group parser text encoding
Andreas Müller
11:01 AM Revision bf56e79a (cdmlib): cleanup
Andreas Müller
11:01 AM Revision dc7815d5 (cdmlib): ref #7640, ref #4209 update country labels and split label from offic...
Andreas Müller
11:01 AM Revision bd2f30c9 (cdmlib): ref #9755 add abbrev to cultivar group representation
Andreas Müller
11:01 AM Revision f7e576ba (cdmlib): ref #9761 add cultivarGroup column
Andreas Müller
09:50 AM feature request #7640 (Resolved): Update ISO country names where necessary
Andreas Müller

09/15/2021

11:04 PM feature request #4209 (In Progress): Better handling of labels, abbreviations and descriptions in...
Andreas Müller
04:59 PM Revision 5ab7edf7 (cdm-dataportal): fixing git auto-merge error
Andreas Kohlbecker
04:51 PM Revision c906cdf5 (cdm-dataportal): Merge tag '5.26.5' into develop
tagging hotfix Andreas Kohlbecker
04:51 PM Revision 81cf0d42 (cdm-dataportal): Merge branch 'hotfix/5.26.5'
Andreas Kohlbecker
04:51 PM Revision 712d7217 (cdm-dataportal): ref #9764 autocomplete for category field
Andreas Kohlbecker
04:51 PM Revision 43f4c619 (cdm-dataportal): ref #9764 adding missing category field
Andreas Kohlbecker
04:50 PM bug #9764 (Closed): external-links form misses category field
Andreas Kohlbecker
04:12 PM bug #9764 (Closed): external-links form misses category field
add a field for category with auto suggest combobox Andreas Kohlbecker
04:48 PM Revision 955f2191 (cdm-dataportal): ref #9764 autocomplete for category field
Andreas Kohlbecker
04:15 PM Revision 73780c64 (cdm-dataportal): ref #9764 adding missing category field
Andreas Kohlbecker
04:10 PM bug #9763 (Closed): adding new external link broken
Andreas Kohlbecker
04:09 PM bug #9763 (Resolved): adding new external link broken
Applied in changeset commit:cdm-dataportal|3700d60368ddb0b49899cbfbdb59e6a7b5999306. Andreas Kohlbecker
03:58 PM bug #9763 (Closed): adding new external link broken
adding a new external link fails with a WSOD Andreas Kohlbecker
04:09 PM Revision 3700d603 (cdm-dataportal): fix #9763 adapting broken exist function to new data scheme
Andreas Kohlbecker
03:48 PM feature request #9761 (In Progress): Add cultivarGroup as field for handling cultivar groups and ...
Andreas Müller
01:55 PM feature request #9761 (Closed): Add cultivarGroup as field for handling cultivar groups and grex
This is needed as in cultivar names the cultivar epithet can exist together with cultivar group epithet and/or grex e... Andreas Müller
03:45 PM bug #9762 (Closed): Handle cultivars correctly in TaxEditor
copied from #9755
* If ICNCP is selected make only cultivar ranks (#6387) available
* If a cultivar rank is selec...
Andreas Müller
01:53 PM Revision a26701d8 (cdm-dataportal): Merge tag '5.26.4' into develop
tagging hotfix 5.26.4 Andreas Kohlbecker
01:52 PM Revision dfe044b2 (cdm-dataportal): Merge branch 'hotfix/5.26.4'
Andreas Kohlbecker
01:52 PM Revision 9bd9c1f2 (cdm-dataportal): fix #9760 fixing mime-type detection
Andreas Kohlbecker
01:43 PM bug #9760 (Closed): image gallery shows webapp icons instead of thumbnails
Andreas Kohlbecker
01:42 PM bug #9760 (Resolved): image gallery shows webapp icons instead of thumbnails
Applied in changeset commit:cdm-dataportal|c2162a7475c7dac6d90a663403cc23a6be054a75. Andreas Kohlbecker
01:41 PM bug #9760 (Closed): image gallery shows webapp icons instead of thumbnails
see :
![](picture950-1.png)
Andreas Kohlbecker
01:42 PM Revision c2162a74 (cdm-dataportal): fix #9760 fixing mime-type detection
Andreas Kohlbecker
01:32 PM Revision 5bf13b75 (taxeditor): ref #9710: missed adaption in StructuredAggregationConfigurationWi...
Katja Luther
01:00 PM Revision 66889a42 (taxeditor): ref #9710: do not use cdm objects for dds and descriptions in char...
Katja Luther
12:29 PM Revision 71559ffe (cdmlib): ref #9710: switch to dtos for descriptive data set and descriptions f...
Katja Luther
11:30 AM Revision a8d7b69f (cdmlib): fix #9759 fix not existing protectedCache field in persistence matcher
Andreas Müller
10:56 AM bug #9759 (Resolved): Person deduplication does not work due to new collectorTitleCache field
Applied in changeset commit:cdmlib|7cb329fc60af691dd901f0cfb66bad9307cbc0ae. Andreas Müller
10:36 AM bug #9759 (Closed): Person deduplication does not work due to new collectorTitleCache field
... also check if this is the case for nomenclaturalTitleCache Andreas Müller
10:55 AM Revision 7cb329fc (cdmlib): fix #9759 fix missing deduplication for parsed person (and maybe also...
Andreas Müller
10:42 AM Revision 65b3409e (cdmlib): cleanup
Andreas Müller
10:36 AM feature request #9747: Make languages editable in TaxEditor
The doubled separators are removed. Please review. Katja Luther
10:35 AM feature request #9747: Make languages editable in TaxEditor
Andreas Müller wrote:
> The menu for vocabularies and term trees should use the same order. Please move the "languag...
Katja Luther
10:35 AM feature request #9747: Make languages editable in TaxEditor
Andreas Müller wrote:
> Functionallity works and ticket can be closed.
>
> However, the Language class has 1 more...
Katja Luther
10:34 AM feature request #9747 (Resolved): Make languages editable in TaxEditor
Applied in changeset commit:taxeditor|5cabd426f71e5cc0254e32e414ff7afc26b92ed5. Katja Luther
09:52 AM feature request #9747: Make languages editable in TaxEditor
Andreas Müller wrote:
> According to commit 53e555624aa688 there is lots of commented code now in OpenDefinedTermEdi...
Katja Luther
10:34 AM Revision 5cabd426 (taxeditor): fix #9747: add language detail element and smaller changes in menu
Katja Luther

09/14/2021

09:52 PM bug #8936: Improve default distribution formatting
Do you have some example links on test server? Andreas Müller
09:51 PM feature request #9747: Make languages editable in TaxEditor
According to commit 53e555624aa688 there is lots of commented code now in OpenDefinedTermEditorHandlerE4.java . Can t... Andreas Müller
09:49 PM feature request #9747: Make languages editable in TaxEditor
Functionallity works and ticket can be closed.
However, the Language class has 1 more attribute iso639_1 which ref...
Andreas Müller
09:44 PM feature request #9747: Make languages editable in TaxEditor
Minor issue:
There is a separator below "New" but no other group or item:
![](picture451-1.png)
Can we remov...
Andreas Müller
09:34 PM feature request #9747 (Feedback): Make languages editable in TaxEditor
The menu for vocabularies and term trees should use the same order. Please move the "language" menu item to the same ... Andreas Müller
10:43 AM feature request #9747: Make languages editable in TaxEditor
Now the implementation uses the cdmVocabularyUuid method. Katja Luther
09:32 PM feature request #7646 (Closed): Implement parser and formatter for "hort."
I tested in editor and it also works there. So I close the ticket. Andreas Müller
09:18 PM task #9744: Find suitable name for the Freetext- or Name-Editor
HOORAY !!!!! Andreas Kohlbecker
09:12 PM task #9744 (Closed): Find suitable name for the Freetext- or Name-Editor
We decided to use "Taxon Editor" for the formerly labeled "Name Editor" and not to change "bulk editor" labels for no... Andreas Müller
09:10 PM task #9744 (Resolved): Find suitable name for the Freetext- or Name-Editor
WGB:
einverstanden, das ist eine gute Lösung, ich wäre nicht für „Freetext“.
Eine Frage wäre noch, ob wir bei „B...
Andreas Müller
04:37 PM feature request #9757 (In Progress): Make cultivars, cultivar groups and grexes parsable
Andreas Müller
09:47 AM feature request #9757 (Closed): Make cultivars, cultivar groups and grexes parsable
See http://www.actahort.org/chronica/pdf/sh_10.pdf
Allowed characters: Art. 21.18
Andreas Müller
04:14 PM feature request #6387: [Rule] Rank rule for CultivarPlantNames
On convar see https://github.com/tdwg/tnc/blob/master/tcs-deconstructed/TaxonomicRank.md#taxonomicrankcultivatedplant... Andreas Müller
03:17 PM feature request #9758 (In Progress): EmailService implemented
Andreas Kohlbecker
03:17 PM feature request #9758: EmailService implemented
We can use the `org.springframework.mail.javamail.JavaMailSenderImpl` instead of implementing our own service Andreas Kohlbecker
03:10 PM feature request #9758 (Closed): EmailService implemented
A service to send emails
Configuration of the following properties should be possible via a Spring-PropertySource:...
Andreas Kohlbecker
02:56 PM feature request #9755 (In Progress): Open issues for cultivar handling
Existing cases:
~~~
SELECT *
FROM TaxonName tn INNER JOIN DefinedTermBase r ON r.id = tn.rank_id
WHERE r.uuid =...
Andreas Müller
02:33 PM Revision edd21192 (cdmlib): ref #9757 further improve cultivar parsing
Andreas Müller
02:32 PM Revision df6429b7 (cdmlib): cleanup
Andreas Müller
12:34 PM Revision d9add188 (cdmlib): ref #9754 , ref #9757 further improve cultivar name parsing and forma...
Andreas Müller
11:05 AM bug #9452 (Closed): Name Type Editor: allowed combination of fields
Andreas Kohlbecker
10:54 AM bug #9452: Name Type Editor: allowed combination of fields
Works as expected, the bug is fixed, fine. Ticket can be closed. Wolf-Henning Kusber
11:04 AM feature request #9706 (Closed): Name Editor for Sections: show simple form for in-authors without...
Andreas Kohlbecker
10:59 AM feature request #9706: Name Editor for Sections: show simple form for in-authors without full cit...
Works as expected. Ticket can be closed. Wolf-Henning Kusber
10:06 AM Revision 3bed313a (taxeditor): revert changes because cdmlib still missing
Katja Luther
09:57 AM Revision 487f1047 (taxeditor): fix #9747: use language uuid to check for managed cdm vocabulary
Katja Luther
09:49 AM Revision 7d2d06a9 (cdmlib): ref #9757 first implementation of cultivar parsing
Andreas Müller
09:45 AM Revision b668dc22 (cdmlib): cleanup
Andreas Müller
09:44 AM Revision d515ad59 (cdmlib): ref #9754 first implementation for cultivar formatter
Andreas Müller

09/13/2021

02:07 PM bug #8936 (Resolved): Improve default distribution formatting
please review
Andreas Kohlbecker
02:07 PM bug #8936: Improve default distribution formatting
The following portals need to be checked after the release:
~~http://portal.cybertaxonomy.org/diptera/~~ ':
~~htt...
Andreas Kohlbecker
01:41 PM bug #8936: Improve default distribution formatting
New parameter `item_suffix` with default value "`: `" Andreas Kohlbecker
01:36 PM bug #8936 (In Progress): Improve default distribution formatting
need to solve #9756 in the context of this ticket since the issues are more closely related than initially assumed Andreas Kohlbecker
08:45 AM bug #8936 (Closed): Improve default distribution formatting
Andreas Kohlbecker
08:44 AM bug #8936 (Resolved): Improve default distribution formatting
Applied in changeset commit:cdm-dataportal|abf4371572af20f9f408c45fc893b75695fb169e. Andreas Kohlbecker
02:00 PM Revision 262f020c (cdm-dataportal): ref #8936 introducing additional hierarchical distribution s...
Andreas Kohlbecker
02:00 PM Revision 5777b93e (cdm-dataportal): ref #9756 introducing additional hierarchical distribution st...
Andreas Kohlbecker
01:43 PM bug #9756 (Duplicate): Footnote key placement in hierarchical distributions improved
closing as duplicate of #8936 Andreas Kohlbecker
08:35 AM bug #9756 (Duplicate): Footnote key placement in hierarchical distributions improved
See:
![](picture317-1.png)
the footnote key should come before the colon
Example: https://132.248.13.83/cd...
Andreas Kohlbecker
01:39 PM Revision b6d8f977 (cdmlib): ref #9747 add getCdmVocabularyUuids to Language
Andreas Müller
01:27 PM Revision 7a56df2b (cdmlib): ref #9747 add getCdmVocabularyUuids to Language
Andreas Müller
01:27 PM Revision 6724ea84 (cdmlib): cleanup
Andreas Müller
01:20 PM feature request #9747: Make languages editable in TaxEditor
To add the language editor can be done in 5 minutes, but to allow the editing for non cdm languages and do not allow ... Katja Luther
01:17 PM feature request #9747 (Resolved): Make languages editable in TaxEditor
Applied in changeset commit:taxeditor|53e555624aa688350d4c89e43e8a3f172e534022. Katja Luther
01:17 PM Revision 53e55562 (taxeditor): fix #9747: add language vocabulary editor
Katja Luther
08:44 AM Revision abf43715 (cdm-dataportal): fix #8936 new default format for hierarchical distributions
Andreas Kohlbecker

09/11/2021

03:52 PM feature request #9754 (In Progress): Adapt cache strategy to support cultivar names
Andreas Müller
09:41 AM feature request #9754: Adapt cache strategy to support cultivar names
Further problems for cultivar groups are:
* The "Group" epithet may need translation (Art. 15.1) - alternatively t...
Andreas Müller
09:00 AM feature request #9754: Adapt cache strategy to support cultivar names
There is a problem that cultivar names to not have a "parent rank" and therefore it needs to be computed which epithe... Andreas Müller
08:55 AM feature request #9754 (Closed): Adapt cache strategy to support cultivar names
copied form #6963
We need a cache strategy for Cultivar Status (Art. 14), Group Status (Art. 15) and Grex Status (...
Andreas Müller
03:08 PM feature request #9755 (In Progress): Open issues for cultivar handling
~~Cultivar names, groups and grex are currently not parsable~~ (#9757)
~~Cultivar names, groups and grex need to b...
Andreas Müller
03:06 PM feature request #5981: Add abbreviation to Rank "Cultivar"
Note: according to the code 'cv.' should not be used for cultivar names (anymore?) Andreas Müller

09/10/2021

07:47 PM Revision 5b238ca8 (cdm-vaadin): ref #6732 fixing layout problems in valo-theme with native selects
Andreas Kohlbecker
05:47 PM Revision ad6c211a (cdm-vaadin): ref #6732 rank selector offering compact and full list of ranks
Andreas Kohlbecker
08:13 AM Revision 09e946a5 (taxeditor): Merge branch 'hotfix/5.26.1'
jenkins

09/09/2021

06:02 PM bug #9701 (Closed): Order and display of different typifications for one name in one reference
Andreas Kohlbecker
04:52 PM bug #9701: Order and display of different typifications for one name in one reference
Working not exactly as expected, but a little bit better :)
The colours are nice, the plural thing is also solved.
...
Wolf-Henning Kusber
02:40 PM Revision 3154576c (taxeditor): ref #9704: fix NPE when moving node to root
Katja Luther
02:25 PM bug #9452: Name Type Editor: allowed combination of fields
please review Andreas Kohlbecker
02:25 PM bug #9452 (Resolved): Name Type Editor: allowed combination of fields
Applied in changeset commit:cdm-vaadin|684d6197df0466dceb8ba592d5e4562593060a8a. Andreas Kohlbecker
02:25 PM Revision 684d6197 (cdm-vaadin): fix #9452 consistend an sensible handling of name type status flags
Andreas Kohlbecker
02:18 PM bug #9753 (New): New adapted wizard(s) for exports/imports using the generic wizard
Some exports and imports still use the generic wizard for exports/imports using the boolean attributes of the configu... Katja Luther
02:09 PM Revision 33545aa0 (cdmlib): improve attribute names and handle all name identifier in cdmlight
Katja Luther
01:42 PM Revision 99814cc6 (cdm-vaadin): fixing LIE caused by new source structure in designationSource
Andreas Kohlbecker
01:36 PM Revision 2b76987d (cdm-vaadin): fixing typo
Andreas Kohlbecker
01:34 PM Revision 819da7cb (taxeditor): adapt method name to label of checkbox
Katja Luther
01:31 PM Revision 16ff3561 (cdmlib-apps): cleanup
Andreas Müller
01:30 PM Revision fb00e77a (cdmlib-apps): ref #9752 adapt mexico import for flora-of-mexico import
Andreas Müller
01:22 PM Revision 632d2f2e (cdmlib): ref #9752 make it possible to add source with original information fo...
Andreas Müller
01:21 PM Revision 7f5ffbcf (cdmlib): ref #7646 , ref #9752 make "hort." parseable
Andreas Müller
01:20 PM feature request #7646 (Resolved): Implement parser and formatter for "hort."
The parser has been implemented for the flora mexico import (#9752). A formatter is not necessary as we do not use a ... Andreas Müller
01:17 PM feature request #6677 (Rejected): Add "hort." flag to Botanical names
For the above reasons adding the flag is rejected. Andreas Müller
01:13 PM Revision ce64cc74 (cdmlib): ref #9752 remove warning for getTitleWithoutYearAndAuthor for some re...
Andreas Müller
01:11 PM task #9752 (Closed): Import for Flora of Mexico
Andreas Müller
12:37 PM feature request #9706: Name Editor for Sections: show simple form for in-authors without full cit...
please review Andreas Kohlbecker
12:37 PM feature request #9706 (Resolved): Name Editor for Sections: show simple form for in-authors witho...
Applied in changeset commit:cdmlib|051b6f6e98d82d69bd8ffefdd0c0df7d1e5958ad. Andreas Kohlbecker
12:13 PM feature request #9706: Name Editor for Sections: show simple form for in-authors without full cit...
Andreas Kohlbecker wrote:
> this behavior should be activated when TaxonNamePopupEditorMode.NOMENCLATURALREFERENCE_S...
Andreas Kohlbecker
12:36 PM Revision 051b6f6e (cdmlib): fix #9706 reducing field visibility of sections to authors, pages and...
Andreas Kohlbecker
12:34 PM task #9744: Find suitable name for the Freetext- or Name-Editor
Die Verwechslungsgefahr zwischen "Name Editor" und "Name Bulk Editor" kommt vermutlich auch daher, dass bei den Bulke... Andreas Kohlbecker
10:51 AM task #9744: Find suitable name for the Freetext- or Name-Editor
WGB:
“Name Editor” ist tatsächlich historisch, und muss immer so erklärt werden. Einen technischen Namen („Freetex...
Andreas Müller
11:12 AM bug #9751: [CdmLight] Exported identifier types should be configurable
AM:
... wobei ich mir nicht ganz sicher bin, wie dringend wir die brauchen. Wenn die Identifier in eigener Tabelle...
Andreas Müller
10:55 AM bug #9751 (New): [CdmLight] Exported identifier types should be configurable
If all identifiers can be exported (see #9750), it should be configurable which types are exported. Katja Luther
10:53 AM bug #9750 (New): [CdmLight] Export all name identifier
Actually only IPNI, Tropicos and WFO identifiers are exported, but the export should handle all kind of identifiers. Katja Luther
10:38 AM bug #9749 (Closed): NPE when opening SpecimenImportView
Works as expected now. Andreas Müller
09:30 AM bug #9749 (Resolved): NPE when opening SpecimenImportView
Applied in changeset commit:taxeditor|51dfe6f454155927ac4d50c50474d8d13c3e2bd4. Katja Luther
09:07 AM bug #9749 (Closed): NPE when opening SpecimenImportView
When opening the biocase or gbif import view:
~~~ text
last remote method : http://160.45.63.230:80/cdmserver/car...
Katja Luther
10:38 AM Revision c7ab12a6 (cdmlib): ref #9701 method to find the highest type status in a TypeDesignation...
Andreas Kohlbecker
10:33 AM Revision 057b35b0 (cdmlib): ref #9701 taggedText to string method with exclude option
Andreas Kohlbecker
10:24 AM bug #9746: Remove excluded and unplaced flags from right click menu
Related to this ticket: if the doubtful flag is set in the taxon node dialogue the navigator seems not to be refreshe... Andreas Müller
10:16 AM bug #9746 (Feedback): Remove excluded and unplaced flags from right click menu
The menu still shows the menu entries but disabled:
![](picture920-1.png)
Andreas Müller
09:52 AM Revision 9eeecf39 (taxeditor): fix #9749: fix NPE when opening specimen import view
Katja Luther
09:15 AM Revision 51dfe6f4 (taxeditor): fix #9749: fix NPE when opening specimen import view
Katja Luther
08:49 AM Revision 7723d3d3 (taxeditor): Updated version in pom / project files to taxeditor version : 5.26...
jenkins

09/08/2021

10:16 PM bug #9701 (Resolved): Order and display of different typifications for one name in one reference
please review Andreas Kohlbecker
03:26 PM bug #9701: Order and display of different typifications for one name in one reference
Other display issues, related to #9308, can be seen here:
![](picture866-1.png)
Andreas Kohlbecker
10:15 PM Revision 4786c609 (cdm-vaadin): ref #9701 defined order of typifications in registration workings...
Andreas Kohlbecker
05:11 PM Revision a4ffd5b8 (cdm-vaadin): ref #9701 better display of typifications in registration working...
Andreas Kohlbecker
03:08 PM feature request #9748 (New): Refactor identifiers
Currently we have the Identifier class (Identifier string + type) and specific classes for DOI, ORCID, LSID etc used ... Andreas Müller
02:17 PM task #8438 (Closed): remove featureTree/* web services in August 2021 if they are unused
all featureTree/* web services removed Andreas Kohlbecker
02:17 PM task #8438 (Resolved): remove featureTree/* web services in August 2021 if they are unused
Applied in changeset commit:cdmlib|567659e868b4bc34d54aa11c03f3db9ee78c4334. Andreas Kohlbecker
02:10 PM task #8438: remove featureTree/* web services in August 2021 if they are unused
`/featureTree` is no longer being used, checked with `zgrep "/featureTree" cdm-server.2021*`
Andreas Kohlbecker
02:16 PM Revision 567659e8 (cdmlib): fix #8438 removing all featureTree/* web services
Andreas Kohlbecker

09/07/2021

03:28 PM Revision fd958579 (cdmlib): ref #9747 add language to TermType.getEmptyDefinedTermBase
Andreas Müller
03:26 PM feature request #9747 (Closed): Make languages editable in TaxEditor
Currently languages are not yet editable in TaxEditor.
For the CDM this is correct. But other languages should be ...
Andreas Müller

09/06/2021

03:56 PM task #9744: Find suitable name for the Freetext- or Name-Editor
AM:
Freitext-Editor finde ich persönlich nicht schlecht, höchstens, außer das in Zukunft auch mal andere Freitext ...
Andreas Müller
03:43 PM task #9744: Find suitable name for the Freetext- or Name-Editor
>Name-Editor is being used in the documentation for historic reasons.
Historically Cherian was using this term int...
Andreas Müller
03:22 PM task #9744: Find suitable name for the Freetext- or Name-Editor
Ein älterer Thread zum Thema:
WGB:
ok, verstanden. Ich finde finde den Begriff Taxon Node für die konkrete Stel...
Andreas Müller
10:46 AM task #9744: Find suitable name for the Freetext- or Name-Editor

> Also Freitext Editor?
>
> @Katja Hast du die Email-Diskussion zu diesem Thema mit Walter denn gefunden und zu ...
Andreas Kohlbecker
03:45 PM task #9308: Supress "designated by" reference in portal in registration ListView and Registration...
can be reviewed from 7.9.21 on Andreas Kohlbecker
03:44 PM task #9308 (Resolved): Supress "designated by" reference in portal in registration ListView and R...
Applied in changeset commit:cdm-vaadin|574886857ce6fde57a478eb2ae3477eaa72ebd11. Andreas Kohlbecker
03:43 PM Revision 57488685 (cdm-vaadin): fix #9308 more structured formatting of type labels and removing ...
Andreas Kohlbecker
03:04 PM feature request #8979: Prevent misuse of field initial for personal names
ready for review on 7.9.21 Andreas Kohlbecker
03:02 PM feature request #8979 (Resolved): Prevent misuse of field initial for personal names
Applied in changeset commit:cdm-vaadin|e1e73a5eae7239539b205b44b365b52c591ba21d. Andreas Kohlbecker
03:02 PM Revision e1e73a5e (cdm-vaadin): fix #8979 tooltip descriptions for all person fields
Andreas Kohlbecker
12:36 PM bug #9745 (Closed): pre-configured map layers using https
all map layers are switched to https Andreas Kohlbecker
12:18 PM Revision 961d35b0 (cdm-dataportal): updating documentation
Andreas Kohlbecker
12:14 PM Revision f568d5e4 (cdm-dataportal): Merge tag '5.26.3' into develop
tagging release 2.26.3 Andreas Kohlbecker
12:14 PM Revision 27989fb5 (cdm-dataportal): Merge branch 'hotfix/5.26.3'
Andreas Kohlbecker
12:14 PM Revision fe4ffeba (cdm-dataportal): ref #9745 switching geo.cybertaxonomy.org to https
Andreas Kohlbecker
10:33 AM bug #9746: Remove excluded and unplaced flags from right click menu
Please review. I also fixed the refresh problem, so now the menu should show set/remove menu item correctly immediate... Katja Luther
10:31 AM bug #9746 (Resolved): Remove excluded and unplaced flags from right click menu
Applied in changeset commit:taxeditor|dc7a943c33e9a733dbf51ba7e86eaf91d7ff2ec2. Katja Luther
08:30 AM bug #9746 (Closed): Remove excluded and unplaced flags from right click menu
The flags unplaced and excluded need more informations therefore it is does not make sense to have it in the right cl... Katja Luther
10:21 AM Revision dc7a943c (taxeditor): fix #9746: remove unplaced and excluded from right click menu of n...
Katja Luther

09/03/2021

05:51 PM Revision e9e677a6 (cdm-dataportal): Merge tag '5.26.2' into develop
tagging release 5.26.2 Andreas Kohlbecker
05:50 PM Revision f9fc9292 (cdm-dataportal): Merge branch 'hotfix/5.26.2'
Andreas Kohlbecker
05:50 PM Revision 47cd8305 (cdm-dataportal): ref #9745 switching all map layers to https (except for geo.c...
Andreas Kohlbecker
05:49 PM bug #9745: pre-configured map layers using https
the correct URL for http://cybertaxonomy.org:8082/mapproxy/service is http://geo.cybertaxonomy.org/mapproxy/service a... Andreas Kohlbecker
05:01 PM bug #9745: pre-configured map layers using https
http://cybertaxonomy.org:8082/mapproxy/service
does not yet support https !!!
Andreas Kohlbecker
04:55 PM bug #9745 (Closed): pre-configured map layers using https
the maps layers provided in are still using http, this results in mixed in http content in the browser like http://b.... Andreas Kohlbecker
01:53 PM task #9744 (Closed): Find suitable name for the Freetext- or Name-Editor
So far, we don't have a commonly accepted name for the "Freetext- or Name- or Wathever-Editor" which is consistently... Andreas Kohlbecker
11:18 AM Revision 2ec64080 (cdmlib): cleanup
Andreas Müller
11:03 AM bug #9742: embedded h2 database in server mode for connection pooling
This is probably more a cdmlib issue then a taxeditor issue Andreas Müller
10:18 AM bug #9742 (New): embedded h2 database in server mode for connection pooling

ich versuche gerade, eine H2 Datenbank auf meinem Laptop zu installieren, in der Hoffnung, dass ich offline an der ...
Andreas Kohlbecker
10:43 AM bug #9463: UniversalViewer causes jQuery version conflict and breaks maps
using the UV webback should solve the problem Andreas Kohlbecker
10:42 AM bug #9743: Universal Viewer - metadata component gets lost on leaving fullscreen mode
* a bug in our UV version?
* would using UV as webpack help? see also #9463
Andreas Kohlbecker
10:38 AM bug #9743 (New): Universal Viewer - metadata component gets lost on leaving fullscreen mode
Norbert: "Wenn ich im Cichorieae-Portal vom Vollbild-View des Viewers auf die verkleinerte Fensteransicht zurückschal... Andreas Kohlbecker

09/02/2021

03:42 PM bug #9729 (Closed): Incomplete bean property Team.nomenclaturalTitleCache
Andreas Müller
12:59 PM bug #9729: Incomplete bean property Team.nomenclaturalTitleCache
seems to be working in cdm-vaadin with the latest adaptions. I could not find any problems. Andreas Kohlbecker
09:23 AM Revision 0cee5989 (taxeditor): code cleaning, removing link with taxon in specimen tree editor
Katja Luther
09:16 AM Revision 485f856b (taxeditor): missing l10n
Katja Luther

09/01/2021

12:53 AM feature request #8028: Better representation of web app media in the image gallery
Is there a follow-up or a already-handled-in ticket for the missing metadata issue? Andreas Müller
12:49 AM feature request #8028 (Feedback): Better representation of web app media in the image gallery
I tried this with taxon media (the original usecase from the description of this ticket).
On caryo_spp /test serve...
Andreas Müller
11:45 PM bug #9741: cdm_dataportal_shortname_of truncates uninomial with not abbreviated author strings an...
Also #6203 might be relevant for this issue. Andreas Müller
02:40 PM bug #9741 (New): cdm_dataportal_shortname_of truncates uninomial with not abbreviated author stri...
for example in https://132.248.13.83/cdm_dataportal/taxon/ed358b48-4e90-40d6-ba5f-10b81f18b72b
Asparagales Link is t...
Andreas Kohlbecker
01:57 PM feature request #7749 (Rejected): Add "Link with taxon selection" as an icon to the toolbar of th...
This will not be implemented for the reasons mentioned in #9732 (last issue). Instead we do have taxon navigator "ope... Andreas Müller
01:55 PM bug #9723 (Duplicate): Specimen tree editor: Function of "Link with taxon selection" in context m...
This duplicates the last issue in #9732 and is fixed in the meanwhile (menu entry was removed). Andreas Müller
01:43 PM Revision 3de8ad27 (taxeditor): ref #9732: remove link with taxon selection menu item
Katja Luther
01:41 PM bug #9732: Open issues in specimen tree editor
Katja Luther wrote:
> • Die Funktionsweise von „Link with taxon selection“ ist mir nicht klar. Bezieht sich das auf ...
Andreas Müller
01:36 PM bug #9732: Open issues in specimen tree editor
NoK:
* Filter "All unit types" statt "Unknown unit type" wäre in der Tat logischer
* "Im search gibt’s den Type...
Andreas Müller
01:33 PM bug #9740 (Worksforme): Adapt Motive(Motif) to Subject in data portal
for details see #9732#note-3 Andreas Müller
01:18 PM bug #9728: NoSuchMethodException Team.areNomenclaturalTitle() breaks authortem editors
I made some adaptations to the changes. See also #9729#note-4 Andreas Müller
01:16 PM bug #9729: Incomplete bean property Team.nomenclaturalTitleCache
Please check if this fullfills the requirements in vaadin. Andreas Müller
01:15 PM bug #9729 (Resolved): Incomplete bean property Team.nomenclaturalTitleCache
I adapted the changes so that it is similar to IdentifiableEntity.titleCache implementation.
This means:
* the ...
Andreas Müller
01:10 PM Revision 9d57197e (cdmlib): Cleanup and javadoc
Andreas Müller
01:08 PM Revision c25885b8 (cdmlib): ref #9729, #9728, #9664 remove deprecated method setNomenclaturalTitle
Andreas Müller
01:03 PM Revision a32f4c74 (cdmlib): ref #9729, #9728, #9664 remove calls to deprecated method setNomencla...
Andreas Müller
12:47 PM Revision 5e7ceaad (cdmlib): ref #9729, #9728, #9664 Adapt handling of nomenclaturalTitleCache set...
Andreas Müller
12:37 PM Revision efd417dd (cdmlib): cleanup
Andreas Müller
11:08 AM Revision a931e823 (taxeditor): load availbale languages
Katja Luther
11:04 AM Revision 279f5ec4 (taxeditor): ref #9739: use common name languages for combo and adapt pref page
Katja Luther
09:56 AM bug #9739: Add common name languages preference to DB preferences
This exception comes from the multilanguage prefernce, but needs to be fixed as well. Katja Luther

08/31/2021

11:09 PM Revision fd47e8cf (taxeditor): cleanup
Andreas Müller
11:08 PM bug #9739 (Feedback): Add common name languages preference to DB preferences
Now it exists, but when saving I got:
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am...
Andreas Müller
09:09 AM bug #9739 (Resolved): Add common name languages preference to DB preferences
Katja Luther
09:05 AM bug #9739: Add common name languages preference to DB preferences
Maybe the editor was not build?
I checked the nightly build and the common name languages where available for DB p...
Katja Luther
05:20 PM bug #9732: Open issues in specimen tree editor
> Als Derived Unit – Media specimen – Kind of media gibt’s nur “Specimen scan”. Ich fände auch hier “Still image” gut... Andreas Müller
05:18 PM bug #9732: Open issues in specimen tree editor
> Der Titel des Bildes im Tree ist das Specimen-Aufsammlungs-Zitat, das ist etwas unglücklich (und repetitiv), finde ... Andreas Müller
05:08 PM bug #9732: Open issues in specimen tree editor
AM:
nur zu motive <-> motif. Bist du da sicher. Laut https://dict.leo.org/englisch-deutsch/motive ist motive eher ...
Andreas Müller
09:15 AM bug #9735 (Closed): [CdmLight] Add type specimen to specimen table
Katja Luther
09:13 AM bug #9645 (Closed): CDM Light: Add Type Statement Reference to homotypicalGroup.csv
Katja Luther
09:08 AM bug #9737 (Closed): [CdmLight] Add two dummy lines for empty tables
Katja Luther
09:07 AM bug #9736 (Closed): [CdmLight] Add new table for type designation to specimen relationship
This ticket can be closed. Katja Luther

08/30/2021

09:07 PM bug #9263 (Closed): Unify case for type designation status
Andreas Kohlbecker wrote:
> Mir ist nicht klar was ich hier machen soll. Die im Kommentar 3 erwähnten FIXMEs sind al...
Andreas Müller
08:23 PM bug #9704 (Closed): Several issues when trying to move taxon with dialogue
Both issues seem to be fixed. Andreas Müller
08:20 PM Revision 0351b2c7 (cdmlib): cleanup
Andreas Müller
08:18 PM Revision c11c91e6 (taxeditor): cleanup
Andreas Müller
07:41 PM bug #9736 (In Progress): [CdmLight] Add new table for type designation to specimen relationship
As there are already commits on this ticket it seems to be at least "In Progress".
If resolved already please adapt ...
Andreas Müller
07:34 PM bug #9739 (Feedback): Add common name languages preference to DB preferences
The current db preferences menu only shows "multi-language support" but not "languages for common names".
Something ...
Andreas Müller
 

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