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From 06/07/2021 to 07/06/2021

07/06/2021

03:18 PM feature request #9337: Open issues for reimplementation of termtree editors
Andreas Müller wrote:
> #note-67 does not fully work for me yet. The new tree seems to get the focus but immediately...
Katja Luther
01:16 PM feature request #9337: Open issues for reimplementation of termtree editors
... by the way this should be the behvior anyway and also works for tree nodes but does not seem to work for trees. Andreas Müller
01:15 PM feature request #9337: Open issues for reimplementation of termtree editors
#note-67 does not fully work for me yet. The new tree seems to get the focus but immediately looses it again. Looks l... Andreas Müller
12:55 PM feature request #9337: Open issues for reimplementation of termtree editors
Andreas Müller wrote:
> Are the other issues also fixed (#60, #61, #64, #67)
#67 is fixed, #60 is fixed
#64 is...
Katja Luther
12:35 PM feature request #9337 (Feedback): Open issues for reimplementation of termtree editors
Are the other issues also fixed (#60, #61, #64, #67) Andreas Müller
12:26 PM feature request #9337 (Resolved): Open issues for reimplementation of termtree editors
Katja Luther wrote:
> Andreas Müller wrote:
> > >Add "Open in Vocabulary" to term tree editor context menu;
> >
...
Katja Luther
11:12 AM feature request #9337: Open issues for reimplementation of termtree editors
Also the "Open issue" is not reproducable anymore today. There must have been some strange problem with the build yes... Andreas Müller
11:09 AM feature request #9337: Open issues for reimplementation of termtree editors
Katja Luther wrote:
> Andreas Müller wrote:
> > In the Character Editor the details view does not show data anymore...
Andreas Müller
11:08 AM feature request #9337: Open issues for reimplementation of termtree editors
Katja Luther wrote:
> Andreas Müller wrote:
> > > in Character Editor allow adding the new created Character at the...
Andreas Müller
11:02 AM feature request #9337: Open issues for reimplementation of termtree editors
Andreas Müller wrote:
> >Add "Open in Vocabulary" to term tree editor context menu;
>
> also this is not visible ...
Katja Luther
11:00 AM feature request #9337: Open issues for reimplementation of termtree editors
Andreas Müller wrote:
> > in Character Editor allow adding the new created Character at the focus place, not only on...
Katja Luther
10:59 AM feature request #9337: Open issues for reimplementation of termtree editors
Andreas Müller wrote:
> In the Character Editor the details view does not show data anymore. This to me seems critic...
Katja Luther
03:15 PM feature request #9288 (Resolved): Add symbols for flags in use for term trees in term tree editor
added also the list symbol. Katja Luther
11:15 AM feature request #9288: Add symbols for flags in use for term trees in term tree editor
Now, trees show a symbol but lists don't. I think either we show a symbol for both or for none of them. Andreas Müller
02:09 PM feature request #9680: Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
The column "collector titlecache" seems to show the collector title not the collector titleCache. At least for Person... Andreas Müller
01:46 PM feature request #9680: Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > Searching for a collector (from FieldUnit details view) does also...
Andreas Müller
01:43 PM feature request #9680: Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
Andreas Müller wrote:
> Searching for a collector (from FieldUnit details view) does also not yet give a result for ...
Andreas Müller
01:40 PM feature request #9680: Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
Andreas Müller wrote:
> Search in bulk editor does not yet include search on collector titlecache
works now
Andreas Müller
12:58 PM bug #9629: Better handling of OptionalDataException
This should be fixed. I tested by adding the following code to the beginning of BulkEditorUtil.openBulkEditor()
~~...
Andreas Müller
12:54 PM bug #9629 (Resolved): Better handling of OptionalDataException
Applied in changeset commit:taxeditor|c5a4c165774d6bf77b9927370983f7aad1cb09b3. Andreas Müller
10:51 AM feature request #5655: [DISCUSS] Do we need further "non xxx" relations?
Before closing this ticket we need to check dataportal and cdmlight to include this relationship in the set of "non"-... Andreas Müller
10:47 AM feature request #5655: [DISCUSS] Do we need further "non xxx" relations?
AM:
Was ich dafür noch bräuchte wären passende Labels für beide Richtungen. Da diese Beziehung als solches nicht v...
Andreas Müller
10:40 AM feature request #5655 (Resolved): [DISCUSS] Do we need further "non xxx" relations?
Andreas Müller
10:41 AM feature request #5640 (Duplicate): [DISCUSS] Do we need a general "non" name relationship
Andreas Müller
10:39 AM feature request #9698 (New): Make name relationship filter a DB preference
... similar to the nomenclatural status filter
To define the set of available name relationships for a project. So...
Andreas Müller
08:19 AM report #7898 (Closed): using jstack on cdmserver with jsvc reports all non native threads as BLOCKED
Andreas Kohlbecker

07/05/2021

09:16 PM feature request #9572 (Feedback): After creating a new term tree set the focus to the new tree
As mentioned in #9337 already, now, having the dialog, we do not need the focus setting anymore or better we should d... Andreas Müller
12:33 PM feature request #9572 (Resolved): After creating a new term tree set the focus to the new tree
Title dialog is available, please review. Katja Luther
09:05 PM feature request #9337: Open issues for reimplementation of termtree editors
>After creating a new term tree set the focus to the new tree and in details view in title cache field
As we have ...
Andreas Müller
08:57 PM feature request #9337: Open issues for reimplementation of termtree editors
>Add "Open in Vocabulary" to term tree editor context menu;
also this is not visible anymore to me
Andreas Müller
08:55 PM feature request #9337: Open issues for reimplementation of termtree editors
> Add "Open in Referencing Objects view" to term tree editor context menu
This does not seem to work, neither in t...
Andreas Müller
08:48 PM feature request #9337: Open issues for reimplementation of termtree editors
sub issue #8756 to me is a critical issue. If possible we should try to fix it within this milestone. Andreas Müller
08:46 PM feature request #9337: Open issues for reimplementation of termtree editors
In the Character Editor the details view does not show data anymore. This to me seems critical as this is a place whe... Andreas Müller
08:44 PM feature request #9337: Open issues for reimplementation of termtree editors
> in Character Editor allow adding the new created Character at the focus place, not only on top
This to me still ...
Andreas Müller
08:43 PM feature request #9337: Open issues for reimplementation of termtree editors
> d&d from vocabulary editor to character editor not yet supported (maybe handled in #8554, #8238)
This to me seem...
Andreas Müller
08:29 PM feature request #9337 (Feedback): Open issues for reimplementation of termtree editors
>Show supplemental data
The UUID and Oject ID fields are now editable (or at least changeable), this seems to be a...
Andreas Müller
08:04 PM feature request #9337: Open issues for reimplementation of termtree editors
I moved all issues still marked as open to a new ticket #9697.
The issues marked as fixed are for review.
Andreas Müller
12:35 PM feature request #9337 (Resolved): Open issues for reimplementation of termtree editors
Andreas Müller
08:03 PM feature request #9697 (New): Remaining issues for reimplementation of termtree editors
copied from #9337
* Show supplemental data for term trees (term nodes already work)
* For a very short time it st...
Andreas Müller
07:50 PM feature request #9696 (New): Implement taxon concept additional parameter for Taxon details view
... and show them if supportTaxonConcept (#9695) preference is set.
If easy to implement you could also implement ...
Andreas Müller
07:44 PM feature request #9695 (Resolved): Implement a preference for supportsConcepts
I added the predicate. Please review. Andreas Müller
07:43 PM feature request #9695 (Closed): Implement a preference for supportsConcepts
this might be a preliminary preference which makes it possible to do some development on develop branch without beaki... Andreas Müller
07:34 PM report #7898: using jstack on cdmserver with jsvc reports all non native threads as BLOCKED
This ticket is marked as resolved and 100% in Unassigned milestone. Can we fully close it and remove milestone or mov... Andreas Müller
07:29 PM task #8379 (Resolved): Review strange specimen implementations
According to note 13 this only needs a final check. So I put it on resolved in case it is fixed and only needs review. Andreas Müller
07:27 PM task #8392 (Feedback): Types in PhycoBank
Andreas Müller
07:26 PM task #8392: Types in PhycoBank
Wolf-Henning Kusber wrote:
> In general, gathering and type and specimen information is displayed in different more ...
Andreas Müller
02:01 PM feature request #9694 (New): Validation Framework light
Until the full validation framework is available we could implement a script that can be run against a DB which does ... Andreas Müller
01:36 PM feature request #9692 (Closed): Add Operation class and link from TaxonRelationship
Andreas Müller
12:53 PM task #9693 (New): Install testing environment for mac os
For testing the editor in a mac os environment we need a virtual box instance with mac os or a test computer.
Katja Luther
11:11 AM feature request #786: Write Developers Guide for CDM Library
I agree that we should generally close the ticket as we do not need an extensive documentation. But maybe before clos... Andreas Müller
10:41 AM feature request #786 (Feedback): Write Developers Guide for CDM Library
I guess we don't need a ticket for this. Partially it is solved already by the wiki and we are only 2.5 developers wo... Andreas Kohlbecker
10:20 AM feature request #7309: Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
Andreas Müller wrote:
> A final minor issue. Can we use a grey which is a bit more light? Currently, at least on my ...
Katja Luther
10:15 AM bug #9629 (In Progress): Better handling of OptionalDataException
Katja Luther
10:14 AM bug #9690 (Closed): Exception when editing name supplemental data in taxon bulk editor
I tested it again and did not get the exception anymore, so I would close this ticket. Katja Luther
10:08 AM feature request #6929 (In Progress): handling of misapplied names without accepted name
Katja Luther
09:59 AM bug #9684 (Feedback): OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon() - [UPDATE] not permitted for 'anonymousUser'
Is this fixed by the commits? Or is there another open issue? Andreas Müller
09:41 AM feature request #688 (Worksforme): Tests for AbstactBeanInitializer implemented
Correct, the AdvancedBeanInitializerTests should be sufficient, even if I can't tell if we have 100% test coverage. N... Andreas Kohlbecker

07/03/2021

12:10 AM feature request #9692 (Resolved): Add Operation class and link from TaxonRelationship
Andreas Müller
12:10 AM task #5244 (Closed): [DISCUSS] How should specimens be created and edited?
Works as expected. Andreas Müller

07/02/2021

11:36 PM bug #7075: Excel import for images
Also check the import mentioned in #516 for open issues (ticket was closed as it is kind of duplicate for this ticket) Andreas Müller
11:35 PM bug #7075: Excel import for images
Generally this is ready and can be closed, but we need a follow up ticket for further generic implementation for imag... Andreas Müller
11:23 PM task #578: @Ignore removed from PersistentTermInitializerTest
The test is still on ignore. Andreas Müller
11:13 PM feature request #688 (Feedback): Tests for AbstactBeanInitializer implemented
We do have tests for AdvancedBeanInitializer which is used as default now. So I don't know if we still need to implem... Andreas Müller
11:10 PM feature request #694: FeatureTreeService and DescriptionElement implemented
We do have a term tree service. But there is no DescriptionElementService yet. Needs discussion if we really need it. Andreas Müller
11:06 PM feature request #718: Long term solution for saving images to taxa
Andreas Müller wrote:
> it looks like the #700 becomes a stable solution so maybe we can close this ticket.
>
>
...
Andreas Müller
10:59 PM bug #8202: Multiple representations exception when reusing image in image gallery
We should check if this is still an open issue. If yes, fix it. Andreas Müller
10:50 PM bug #825: DefinedTermDaoImpl - missleading method names
This is still an open issue. Andreas Müller
10:29 PM feature request #1097: Check comb. nov. with taxonomists
Comb. nov. currently is a nomenclatural status but it needs to be discussed if this makes sense. See also related tic... Andreas Müller
10:06 PM feature request #1742: Adapt the ZooNameDefaultCacheStrategy
Is this still an open issue? Andreas Müller
10:04 PM bug #1835: PALMS. Not clear format for authors and references to be parsed correctly
Check what is still open here. (At least the alternative year parsing) Andreas Müller
08:57 PM task #2346 (Rejected): [Discuss] Version Numbering for CDM Library
I think I current version numbering works very well for us now even if we do not fully follow the suggestions in http... Andreas Müller
08:49 PM feature request #2395: Create update script for type status abbreviations and for Unknown type category
Check if this is still needed! Andreas Müller
08:36 PM bug #2449 (Resolved): Some or many names have an empty fullTitleCache though information is atomized
Check if this is fixed with #9665 Andreas Müller
08:32 PM bug #2448 (Feedback): Missing updated by/when (e.g. in PalmWeb)
Maybe this is fixed with #5066.
Need to check recent data if it still happens.
Andreas Müller
07:33 PM task #2669 (Worksforme): Move current dataset.dtd to persistence layer and fix testListInitialization test
This seems to be fixed as there is only 1 dataset.dtd left and it has been moved to cdmlib-test. Andreas Müller
07:25 PM task #2859: TaxonNameBase.getReferenceYear does not return inRef year
Generally this exact method does not seem to be used at all (I checked in cdmlib, vaadin and imports by call hiearchy... Andreas Müller
06:33 PM bug #3933 (Duplicate): the search result list should contain bastards in alphabetical order
I close this as duplicate for #4796 Andreas Müller
06:27 PM bug #3933: the search result list should contain bastards in alphabetical order
Need to check if this is still the case. If yes, try to implement correctly. Andreas Müller
06:31 PM bug #4796: Sorting of hybrids
This is probably duplicated by #3933. See also comments there.
Test if it is still an open issue.
Andreas Müller
06:15 PM bug #7233 (Feedback): LIE during processing of webservice request to /portal/taxon/{uuid}/taxonNodes
Can you please check if this is still an open issue after the nomenclaturalTitle implementation has been changed now ... Andreas Müller
06:10 PM task #3346 (Feedback): Team.addListenerForTeamMember(Person member) adds idle listener
This seems to be fixed or the problem was removed in some other way.
Can you please verify, and if true, close tic...
Andreas Müller
05:54 PM feature request #8157: Registration list view: sort registrations by the same order as in the dataportal
"old" milestone should not be used anymore Andreas Müller
05:52 PM feature request #9442: Show warning for non conformant letter case in scientific names
"Old" milestone should not be used anymore Andreas Müller
02:45 PM task #5244: [DISCUSS] How should specimens be created and edited?
Hmm, I thought about it again and I think we can leave it as it is. Disabling also has disadvantages. Andreas Müller
02:42 PM task #5244: [DISCUSS] How should specimens be created and edited?
Katja Luther wrote:
> I removed the field unit from the combo box if it is anything else than a field unit and remov...
Andreas Müller
01:42 PM task #5244 (Resolved): [DISCUSS] How should specimens be created and edited?
I removed the field unit from the combo box if it is anything else than a field unit and removed the combo box if it ... Katja Luther
12:22 PM task #5244 (Feedback): [DISCUSS] How should specimens be created and edited?
This ticket is fixed except for the open issue on limitation when setting the type. Can you please fix these minor is... Andreas Müller
12:17 PM task #5244: [DISCUSS] How should specimens be created and edited?
The other way round for field units the type should not be changeable at all as generally switching a field unit to a... Andreas Müller
11:48 AM task #5244: [DISCUSS] How should specimens be created and edited?
Katja Luther wrote:
> Andreas Müller wrote:
> > Open issues:
> >
> > * Calling "New" in specimen list editor fir...
Andreas Müller
11:45 AM task #5244: [DISCUSS] How should specimens be created and edited?
Andreas Müller wrote:
> Open issues:
>
> * Calling "New" in specimen list editor first opens single line dialogue...
Katja Luther
11:13 AM task #5244: [DISCUSS] How should specimens be created and edited?
Open issues:
* Calling "New" in specimen list editor first opens single line dialogue and then opens full dialogue...
Andreas Müller
12:59 PM feature request #9692 (Closed): Add Operation class and link from TaxonRelationship
The class for now can be versionable (maybe later annotatable).
Also we need an Enum for operation types (starting...
Andreas Müller
12:53 PM task #9624 (Closed): Centralize team formatting and fix et al. position handling
I think we can close this ticket. If there are open issues we should open new tickets. Andreas Müller
12:50 PM task #9599: remove usage of 'reference/{uuid}/nomenclaturalCitation' in portal
For having the nom ref in the tagged title you need to use the TaxonName.getTaggedFullTitle() method. This includes t... Andreas Müller
11:03 AM bug #9688 (Closed): Make disabled fields copyable
works as expected now. Andreas Müller
10:51 AM feature request #7251 (Resolved): Enable collectorTitle in cdm-vaadin TeamOrPersonBaseCaptionGenerator
This was solved with #4311 I guess. Please review.
Please also check if some implementation needs to be done for #...
Andreas Müller
10:41 AM feature request #4311 (Closed): Improve person representation in CDM
All issues are fixed now except for those mentioned in the followup ticket. Andreas Müller

07/01/2021

03:58 PM bug #9688: Make disabled fields copyable
I guess this is for review. Andreas Müller
02:52 PM bug #9688 (Resolved): Make disabled fields copyable
Applied in changeset commit:taxeditor|20e64571d5a2eb538996e867b9894f04360e7f95. Katja Luther
01:34 PM bug #9688 (Feedback): Make disabled fields copyable
Now an unprotected toggleable field can be edited. I tested with unprotected collector title of a team. But same resu... Andreas Müller
12:13 PM bug #9688: Make disabled fields copyable
This is fixed, please review. Katja Luther
12:12 PM bug #9688 (Resolved): Make disabled fields copyable
Applied in changeset commit:taxeditor|5953dccec12018da410a14fca6d0d37c30822dc8. Katja Luther
10:32 AM bug #9688: Make disabled fields copyable
Andreas Müller wrote:
> Copy from #9287:
>
> AM:
>
> For toggleable they still set the dirty flag (tested on P...
Katja Luther
10:02 AM bug #9688 (Feedback): Make disabled fields copyable
Copy from #9287:
AM:
For toggleable they still set the dirty flag (tested on Person details view with bulk edit...
Andreas Müller
03:56 PM bug #9634 (Closed): Update AgentBase and DescriptiveDataSet titleCache length where needed
I did run the "find open issue" statement on edit-test and edit-integration and could not find any open issues except... Andreas Müller
03:29 PM task #9679: Formatter and update script for SpecimenOrObservationBase short cache
Once this is implemented we should add #5951 to current milestone. Andreas Müller
03:28 PM task #9678 (Closed): Remove Derived- and FieldUnitFacadeCacheStrategies
I think we can close this ticket now. Also the failing test in dataportal is fixed now (mediaspecimen are shown there... Andreas Müller
03:23 PM feature request #5575 (Closed): DNA Sample requires CacheStrategy
Not sure if this is already fully fixed but it needs to be adapted/tested anyway once we unify DnaSample with Derived... Andreas Müller
02:57 PM bug #9683 (Feedback): Auto-initialize root bean
I finally decided to rename the methods (in service and persistence) to loadWithoutInitializing as this is semantical... Andreas Müller
02:40 PM bug #9663 (Closed): Remove additional text from media title
Works as expected and removing the file suffix is another good feature.
Only there was 1 test that was adapted in ...
Andreas Müller
01:50 PM bug #9690: Exception when editing name supplemental data in taxon bulk editor
Andreas Müller wrote:
> Now I get
>
>
> when I try to add a name identifier within the bulkeditor for taxa (b...
Katja Luther
01:16 PM bug #9690: Exception when editing name supplemental data in taxon bulk editor
Except for the above exception the bug seems to be fixed now. Andreas Müller
01:15 PM bug #9690 (Feedback): Exception when editing name supplemental data in taxon bulk editor
Now I get
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/common.service
la...
Andreas Müller
01:31 PM feature request #7309 (Feedback): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
A final minor issue. Can we use a grey which is a bit more light? Currently, at least on my screen, it is difficult t... Andreas Müller
01:24 PM feature request #7309 (Closed): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
Works as expected now Andreas Müller
12:48 PM bug #9373 (Closed): In specimen details view used within specimen tree editor titleCache field is not enabled when it is protected
works as expected Andreas Müller
10:01 AM feature request #9287 (Closed): Show term details in details view of term tree editor
As there is a followup ticket for the general "copyable" issue we can close this ticket and move discussion on "copya... Andreas Müller
10:00 AM feature request #9287: Show term details in details view of term tree editor
Andreas Müller wrote:
> It works as expected for the fields in the term tree details view (which are not toggleable)...
Katja Luther
09:56 AM feature request #9287: Show term details in details view of term tree editor
It works as expected for the fields in the term tree details view (which are not toggleable).
For toggleable they ...
Andreas Müller
09:42 AM feature request #9680: Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
Searching for a collector (from FieldUnit details view) does also not yet give a result for searching on collector ti... Andreas Müller
09:33 AM feature request #9680: Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
The search result in search dialog does not yet include the collector title cache
![](picture865-1.png)
This is...
Andreas Müller
09:30 AM feature request #9680 (Feedback): Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
Search in bulk editor does not yet include search on collector titlecache Andreas Müller

06/30/2021

10:01 PM feature request #5655: [DISCUSS] Do we need further "non xxx" relations?
WGB:
Non-indications without giving the exact reason:
I would also [like] to have a simple directed name relation...
Andreas Müller
09:52 PM feature request #5655: [DISCUSS] Do we need further "non xxx" relations?
Hallo,
ich dachte, ich hätte hierzu schon geschrieben, aber ich finde die Mail nicht (und im Release ist’s auch nich...
Andreas Müller
09:14 PM bug #6468 (Worksforme): sec and sensu not correct if misapplied name relationship reference exists
This to me seems to be fixed with the implementation on formatter for taxon relationships (misapplications and pro pa... Andreas Müller
09:11 PM task #9528 (Worksforme): synonymy: missplied names sensu with short authorship string
This to me seems to be fixed with the latest changes on short citation formatting in cdmlib.
The citation now look...
Andreas Müller
06:21 PM bug #9691 (New): Implement aggregates correctly for zoological names
Zoology handles aggregates different to botany as can be seen in the ICZN: https://code.iczn.org/chapter-2-the-number... Andreas Müller
03:09 PM bug #9683 (Resolved): Auto-initialize root bean
Ok, thank you for the explanation. I would prefer having the same method names in the DAP and service layer. We can k... Andreas Kohlbecker
02:42 PM task #8865: more external-links to be implemented
Now that the external links have been re-implemented new link templates can be added dynamically.
Hence the links su...
Andreas Kohlbecker
02:22 PM feature request #7309 (Resolved): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
Andreas Müller wrote:
> It seems to work now.
>
> However, there is another problem now. The protect button is di...
Katja Luther
02:20 PM bug #9373 (Resolved): In specimen details view used within specimen tree editor titleCache field is not enabled when it is protected
this is fixed, please review. Katja Luther
02:14 PM bug #9690: Exception when editing name supplemental data in taxon bulk editor
this should be fixed, please review. Katja Luther
02:13 PM bug #9690 (Resolved): Exception when editing name supplemental data in taxon bulk editor
Applied in changeset commit:taxeditor|8a134bb221ba7b33eaefc95e7ce4b5e8e32cf623. Katja Luther
02:11 PM bug #9690 (Closed): Exception when editing name supplemental data in taxon bulk editor
mail WB:
Hallo,
aus dem Taxon Bulk Editor (Taxon? – Ist eigentlich ein Synonym) – Name Suppl. Data – Eingabe WFO-...
Katja Luther
01:47 PM feature request #980 (Closed): Links to relevant external website(s) in taxon pages
PubMed added to the defaults of external links, and all open tasks related to this ticket are solved now.
Andreas Kohlbecker
01:27 PM task #9666 (Closed): cdm_tokens module
test will be implemented for this module and for ext_inks commonly #9659 Andreas Kohlbecker
01:27 PM task #9659: External Links Module reimplemented for flexible configuration
tests will be implemented #9659 Andreas Kohlbecker
01:26 PM task #9689 (New): External Links Module: Tests implemented
These tests will also cover the cdm_tokens module.
Creating a Unit test for both modules is very complicated due t...
Andreas Kohlbecker
01:20 PM bug #3370 (Duplicate): ExternalLinks [ext-links]: External services: GBIF: add infraspecific taxa
has been solved by #9659, closing as duplicate Andreas Kohlbecker
11:40 AM bug #9390 (In Progress): Remaining issues for set secundum dialog
Katja Luther
11:04 AM bug #9688 (Resolved): Make disabled fields copyable
please review. Katja Luther
09:59 AM bug #9688 (Closed): Make disabled fields copyable
from #9287:
There is only one final issue which is valid for all disabled fields. Is it possible to generally make...
Katja Luther
11:01 AM feature request #9680 (Resolved): Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
The Bulkeditor shows the nomenclatural title and collector title. The search is adapted for all searches. Please review. Katja Luther
10:02 AM feature request #9287: Show term details in details view of term tree editor
Andreas Müller wrote:
> Works as expected now and we can close the ticket.
>
> There is only one final issue whic...
Katja Luther

06/29/2021

10:41 PM feature request #7309 (Feedback): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
Andreas Müller
10:29 PM feature request #7309: Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
It seems to work now.
However, there is another problem now. The protect button is disabled for all titleCache fie...
Andreas Müller
10:30 PM feature request #9287: Show term details in details view of term tree editor
See also #7309#note-19 which is maybe related to this ticket. Andreas Müller
07:06 PM feature request #9287 (Feedback): Show term details in details view of term tree editor
Works as expected now and we can close the ticket.
There is only one final issue which is valid for all disabled f...
Andreas Müller
11:49 AM feature request #9287 (Resolved): Show term details in details view of term tree editor
Andreas Müller wrote:
> The buttons for multi-language editing are still enabled. So it is possble to remove a descr...
Katja Luther
06:59 PM feature request #9647 (Closed): After deduplication the remaining record should get the focus in bulk editor
I also could not reproduce this anymore. So I think we can close this ticket and watch the deduplication in production. Andreas Müller
06:50 PM task #6714 (Closed): Create 001-cdm.h2.sql automatically
Andreas Müller
06:41 PM task #6714 (Resolved): Create 001-cdm.h2.sql automatically
Andreas Müller
12:46 PM feature request #9687 (New): SpecimenTypeDesignationWorkingsetEditor: Option to create new type specimen by cloning existing
UseCase: an invalid name has type information (entered into the SpecimenTypeDesignationWorkingsetEditor in Vaadin.
...
Wolf-Henning Kusber
11:57 AM bug #9686 (New): nomenclatural status missing in
see
https://www.phycobank.org/cdm_dataportal/registration-search/filter?identifier=&taxon_name=Encyonema+chebaling...
Andreas Kohlbecker
11:47 AM feature request #9685: add separator between rule applied and code edition
fixed. please review after the relase. Andreas Kohlbecker
11:46 AM feature request #9685 (Resolved): add separator between rule applied and code edition
Applied in changeset commit:cdm-dataportal|8242168c0f18d1c516cc5e328c47f9daef8c66fa. Andreas Kohlbecker
11:34 AM feature request #9685 (Resolved): add separator between rule applied and code edition
https://www.phycobank.org/cdm_dataportal/registration?identifier=http://phycobank.org/102790
Art. 40.7; Turland
Andreas Kohlbecker
10:21 AM task #9659 (Closed): External Links Module reimplemented for flexible configuration
Andreas Kohlbecker

06/28/2021

04:49 PM bug #8364 (Closed): ext-links module: problems
done Andreas Kohlbecker
04:06 PM bug #8364: ext-links module: problems
I am unsure if we really should add a link to a specific release of CoL as CoL meanwhile has switched to an monthly r... Andreas Kohlbecker
02:31 PM bug #8364 (In Progress): ext-links module: problems
Andreas Kohlbecker
04:20 PM feature request #9647: After deduplication the remaining record should get the focus in bulk editor
Andreas Müller wrote:
> This generally works as expected but in 20-30% of the cases after setting the focus it got l...
Katja Luther
04:16 PM feature request #7309 (Resolved): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
Katja Luther
04:15 PM feature request #7309: Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
Andreas Müller wrote:
> >For Person the result of the collectorTitleCache field should only be displayed but not be ...
Katja Luther
03:08 PM bug #9683: Auto-initialize root bean
My comment was about the method in service. Maybe in dao it is slightly different as it is always used within a sessi... Andreas Müller
03:06 PM bug #9683: Auto-initialize root bean
Andreas Kohlbecker wrote:
> I think the new method, which by the way is only used for test classes, is irritating:
...
Andreas Müller
02:10 PM bug #9683 (Feedback): Auto-initialize root bean
I think the new method, which by the way is only used for test classes, is irritating:
~~~
public T loadProxy(int...
Andreas Kohlbecker
09:39 AM bug #9683 (Resolved): Auto-initialize root bean
Applied in changeset commit:cdmlib|5348613baa59038220d4efd1e4a851e3ccdb6c58. Andreas Müller
09:35 AM bug #9683 (Closed): Auto-initialize root bean
Currently only related objects are auto-initialized by the AbstractBean.beanAutoInitializers . The root bean itself i... Andreas Müller
01:27 PM task #9659 (Resolved): External Links Module reimplemented for flexible configuration
this should be fully solved now Andreas Kohlbecker
11:29 AM bug #9684 (Closed): OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon() - [UPDATE] not permitted for 'anonymousUser'

e.e.c.r.controller.TaxonController - rootUnitDTOs()
/cdmserver/integration_reference/portal/taxon/d245083e-3bda...
Andreas Kohlbecker
09:43 AM task #9678 (Resolved): Remove Derived- and FieldUnitFacadeCacheStrategies
The failing test in vaadin is related to incorrect autoinitialization (#9683) which is fixed now. So this ticket shou... Andreas Müller

06/25/2021

07:58 PM bug #9665 (Closed): Filter out property change event for created and updated and cacheStrategy
Andreas Müller
07:44 PM feature request #9682 (New): Implement source for external authors
via webservice to ipni or on something like CDM term server.
Good sources for (botanical) persons are:
Inde...
Andreas Müller
07:41 PM feature request #9664 (Resolved): Add nomenclaturalTitleCache to TeamOrPersonBase
Andreas Müller
07:37 PM feature request #4311 (Resolved): Improve person representation in CDM
Collector titel update script and explicit nomenclaturalTitleCache including protected have been implemented.
Open...
Andreas Müller
07:35 PM task #9681 (New): Open issues for improving person representation
copied from #4311
* usage of "suffix" (correct label??) in "Taxonname reference author" (discuss with NK)
* full ...
Andreas Müller
07:08 PM bug #9651 (Closed): After creating a new MAN the details view is filled with other MAN
Seem to work as expected (but not sure if I could reproduce it correctly) Andreas Müller
07:01 PM feature request #9572 (Feedback): After creating a new term tree set the focus to the new tree
Works as expected so we can close the ticket.
I only wonder if it can be further improved. Currently you have to d...
Andreas Müller
06:55 PM feature request #9647 (Feedback): After deduplication the remaining record should get the focus in bulk editor
This generally works as expected but in 20-30% of the cases after setting the focus it got lost immediately again tho... Andreas Müller
06:47 PM bug #9654 (Closed): Deleting a synonym which has no name throws exception
Works as expected Andreas Müller
06:35 PM feature request #9655 (Closed): When adding a new team member open search dialogue immediately
Works as expected. ... and saves time Andreas Müller
06:32 PM bug #9373: In specimen details view used within specimen tree editor titleCache field is not enabled when it is protected
How to reproduce:
* Create a specimen with a protected titleCache
* Open specimen tree editor and search for the ...
Andreas Müller
06:23 PM feature request #7178 (New): implement collectorTitleCache in TeamOrPersonField (vaadin)
The collector title is now implemented and available so the according field in vaadin editor can be implemented, too. Andreas Müller
06:20 PM feature request #7178: implement collectorTitleCache in TeamOrPersonField (vaadin)
Andreas Kohlbecker wrote:
> Aber bei diesem Ticket geht es um das vaadin UI nicht um die titleCache-Generierung in d...
Andreas Müller
06:17 PM feature request #9680 (Closed): Show collectorTitleCache and protectedCollectorTitleCache+ protectedNomenclaturalTitleCache in BulkEditor
... and extend search on the collectorTitleCache field.
Also the collectorTitleCache should be included in search ...
Andreas Müller
06:12 PM feature request #7309 (Feedback): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
>For Person the result of the collectorTitleCache field should only be displayed but not be editable.
This still s...
Andreas Müller
02:39 PM feature request #7309 (Resolved): Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
This should be implemented now, please review. Katja Luther
06:05 PM feature request #9287 (Feedback): Show term details in details view of term tree editor
The buttons for multi-language editing are still enabled. So it is possble to remove a description for a given langua... Andreas Müller
05:51 PM task #9678 (In Progress): Remove Derived- and FieldUnitFacadeCacheStrategies
Mostly implemented but there is still a test in vaadin that fails due to a lazy initialization exception when calling... Andreas Müller
09:52 AM task #9678 (Closed): Remove Derived- and FieldUnitFacadeCacheStrategies
Cache strategies for FieldUnits and DerivedUnits are currently using the DerivedUnitFacadeCacheStrategy or DerivedUni... Andreas Müller
10:32 AM bug #8517 (Closed): SpecimenOrObservation: data from protected titleCache missig in portal pages
The above links work as expected so I think we can close this ticket. Please reopen if you think there is something l... Andreas Müller
10:11 AM task #9679 (New): Formatter and update script for SpecimenOrObservationBase short cache
... or "identityCache".
Also think about deviding titleCache in titleCache and fullTitle(Cache) where only the lat...
Andreas Müller

06/22/2021

07:22 PM feature request #9677: Implement recombine operation
NaK:
ja, genau, es sind Neukombinationen aufgrund neue taxonomische Erkenntnisse, oder einer phylogenetischen Stud...
Andreas Müller
07:19 PM feature request #9677 (New): Implement recombine operation
Currently we have only move and swap operations available for implementing a recombination of a taxon.
However, us...
Andreas Müller
10:10 AM bug #9676: Separators in nomenclatural act representations between identifier and date
Henning wrote:
Im Prinzip wäre es in der Ansicht, die Andreas M. gezeigt hat sinnvoll, mit Komma jeweils zu trennen.
Andreas Kohlbecker
10:09 AM bug #9676 (New): Separators in nomenclatural act representations between identifier and date
Würde es nicht Sinn machen, den Identifier und das Registrierungsdatum auch mit einem Separator zu versehen. Derzeit ... Andreas Kohlbecker

06/18/2021

12:30 PM feature request #8238: Allow interoperability between term trees
The interoperability should be implemented in cdmlib.
addChild() should allow to add a term that is subtype of the...
Katja Luther
09:27 AM feature request #9572 (Resolved): After creating a new term tree set the focus to the new tree
Now also the focus is set to the titleCache, please review. Katja Luther
09:04 AM bug #9668: Secundum reference is switched when swap synonym and accepted taxon
Discussion how to handle Secundum Reference:
mail AM:
noch eine bisschen detaillierter Überlegung zu der Secund...
Katja Luther

06/17/2021

03:14 PM feature request #9572 (In Progress): After creating a new term tree set the focus to the new tree
After creating a new tree the focus is set to this tree, the focus on titlecache is still missing. Katja Luther

06/16/2021

10:17 PM bug #9634 (Resolved): Update AgentBase and DescriptiveDataSet titleCache length where needed
Andreas Müller
05:33 PM task #9650 (In Progress): Update all titleCaches after upgrade of cache strategies and formatters
Andreas Müller
05:21 PM feature request #3444 (Feedback): Don't show empty General Tab
Andreas Kohlbecker wrote:
> the synonymy can be placed on the general tab, so this ticket is no longer relevant
T...
Andreas Müller
05:03 PM feature request #9674: footnote keys for annotations to multilanguageText name descriptions inside brackets
On the linked site above there is also an unnecessary whitespace before the closing bracket and a full stop after foo... Andreas Müller
04:45 PM feature request #9674: footnote keys for annotations to multilanguageText name descriptions inside brackets
thanks for that hint. Andreas Kohlbecker
03:45 PM feature request #9674: footnote keys for annotations to multilanguageText name descriptions inside brackets
>Aber das original spelling wird hier nicht mit ausgegeben: as „saglione“ – kann man das einstellen? In CDM-light kom... Andreas Müller
11:07 AM feature request #9674 (Resolved): footnote keys for annotations to multilanguageText name descriptions inside brackets
Applied in changeset commit:cdm-dataportal|c4dd76b64df4d09297b4335ac55be13e01833734. Andreas Kohlbecker
10:50 AM feature request #9674 (Closed): footnote keys for annotations to multilanguageText name descriptions inside brackets
Gymnocalycium saglionis (Cels) Britton & Rose, Cactaceae 3: 157. 1922 [Original spelling of epithet should be maintai... Andreas Kohlbecker
03:34 PM bug #9675 (Closed): Person initials should never be empty
Andreas Müller
12:05 PM bug #9675 (Resolved): Person initials should never be empty
Applied in changeset commit:cdmlib|5d058335ab6b9a59fe95c0becec9b4072bb6a0b4. Andreas Müller
12:04 PM bug #9675 (Closed): Person initials should never be empty
but null instead Andreas Müller
11:12 AM feature request #3223 (New): data portal front end for free text search on occurrences
Andreas Müller wrote:
> Is there a reason why you assigned the ticket to me? (dataportal front-end and freetext se...
Andreas Kohlbecker
11:07 AM feature request #3223: data portal front end for free text search on occurrences
Yes, I think it is a general requirement and not only for AT.
Therefore I move it to unassigned.
Is there a reaso...
Andreas Müller
10:56 AM bug #9672: NPE when CDMPreference contains allowOverride=NULL
Andreas Müller wrote:
> Is this ticket really only about "allowOverride=NULL"? I ask because there is so much additi...
Katja Luther
10:53 AM bug #9672: NPE when CDMPreference contains allowOverride=NULL
Is this ticket really only about "allowOverride=NULL"? I ask because there is so much additional information in the d... Andreas Müller
10:52 AM bug #9672: NPE when CDMPreference contains allowOverride=NULL
I added a ticket which should try to set the allowOverride to allowNull=false if possible (unfortunately not trival v... Andreas Müller
10:48 AM bug #9672 (In Progress): NPE when CDMPreference contains allowOverride=NULL
Allow override must never be NULL (even if the schema for historical reasons allwos null). Please adapt data in your ... Andreas Müller
10:16 AM bug #9672: NPE when CDMPreference contains allowOverride=NULL
Hier ist der Stacktrace:
~~~
Caused by: java.lang.IllegalArgumentException: Can not set boolean field eu.etaxonom...
Andreas Kohlbecker
08:35 AM bug #9672 (Duplicate): NPE when CDMPreference contains allowOverride=NULL
eu.etaxonomy.cdm.api.service.MediaServiceImpl.readResourceMetadataFiltered(MediaRepresentation representation) throws... Katja Luther
10:51 AM feature request #9287 (Resolved): Show term details in details view of term tree editor
this should be fixed. Please review. Katja Luther
10:50 AM task #9673 (New): Remove allowNull from allowOverride
in CdmPreferences, if possible.
Use false (0) instead as default.
Andreas Müller
10:40 AM feature request #9270 (Duplicate): show original spelling on taxon page
Andreas Kohlbecker

06/15/2021

05:06 PM bug #9669 (Closed): cdm_dataportal_search_taxon_form_advanced() fails with Allowed memory size of ... bytes exhausted
Andreas Kohlbecker
03:02 PM bug #9669 (Resolved): cdm_dataportal_search_taxon_form_advanced() fails with Allowed memory size of ... bytes exhausted
Applied in changeset commit:cdm-dataportal|ecf46c678ce8626ebe6a945c065c76b7e8819e09. Andreas Kohlbecker
03:01 PM bug #9669 (In Progress): cdm_dataportal_search_taxon_form_advanced() fails with Allowed memory size of ... bytes exhausted
Andreas Kohlbecker
02:51 PM bug #9669 (Closed): cdm_dataportal_search_taxon_form_advanced() fails with Allowed memory size of ... bytes exhausted
~~~
[Tue Jun 15 14:41:08.025031 2021] [php7:notice] [pid 19252] [client 127.0.0.1:53352] PHP Fatal error: Allowed m...
Andreas Kohlbecker
04:26 PM feature request #6213: use separate tempfolder per store updater
should be improved by using subfolders per `Store.storeName`:
pass `Store.storeName` as optional argument to `Http...
Andreas Kohlbecker
04:13 PM bug #9671 (New): handshake_failure on polling for updates at http://eunis.eea.europa.eu/rdf/species.rdf.gz
~~~
javax.net.ssl.SSLHandshakeException: Received fatal alert: handshake_failure
at sun.security.ssl.Alerts...
Andreas Kohlbecker
02:13 PM feature request #3223: data portal front end for free text search on occurrences
This was also required in the campanula project,
As we don't have a specimen search yet, this ticket should conside...
Andreas Kohlbecker
01:42 PM feature request #3444 (Rejected): Don't show empty General Tab
the synonymy can be placed on the general tab, so this ticket is no longer relevant Andreas Kohlbecker
01:41 PM task #3241: favicon for algaterra
Henning, please can you decide? Andreas Kohlbecker
01:14 PM bug #9668: Secundum reference is switched when swap synonym and accepted taxon
In general I wonder if it is a good idea to stay with the new implementation of the method. The current problem shows... Andreas Müller
01:09 PM bug #9668 (Feedback): Secundum reference is switched when swap synonym and accepted taxon
I get
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/taxon.service
last r...
Andreas Müller
11:01 AM bug #9668: Secundum reference is switched when swap synonym and accepted taxon
The hotfix is implemented, please review with nightly. Katja Luther
10:14 AM bug #9668: Secundum reference is switched when swap synonym and accepted taxon
As a workaround the secundum reference is switched in editor for a quick hotfix.
The complete implementation needs...
Katja Luther
09:36 AM bug #9668 (In Progress): Secundum reference is switched when swap synonym and accepted taxon
mail NadjaK:
ich bin gerade auf eine Fehlerquelle gestoßen:

Ich habe Salmonopuntia schickendantzii als neues ...
Katja Luther

06/12/2021

11:53 AM bug #9649 (Resolved): Specimens sometimes have empty titleCache instead of class<UUID>
Set to resolved in case #9665 fixed the issue. Andreas Müller
11:48 AM task #9030 (Closed): Import flowering periods for Cyprus
Import did run. Some manual adaptations needed to be done by RH:
~~~
Taxon uuid has incorrect format. Taxon could...
Andreas Müller
11:46 AM task #9030 (Resolved): Import flowering periods for Cyprus
Applied in changeset commit:cdmlib|43f0d97d9fbc3760be1fbd0d320f3cea94d67706. Andreas Müller
11:42 AM feature request #9667 (New): Printversion for Keys
RH:
Schlüsselsicherung: Gibt es eigentlich eine irgendwie geartete Möglichkeit alle Zypern-Gattungs-Schlüssel in e...
Andreas Müller
12:17 AM feature request #9664 (In Progress): Add nomenclaturalTitleCache to TeamOrPersonBase
Andreas Müller

06/11/2021

04:59 PM task #9666 (Closed): cdm_tokens module
This module will provide Drupal tokens:
~~~
cdm:taxon_name
cdm:taxon_name:uninomial
cdm:taxon_name:epithet
~~~...
Andreas Kohlbecker
02:29 PM feature request #3223 (Feedback): data portal front end for free text search on occurrences
Is this ticket still needed for general use? Andreas Müller
02:26 PM task #3996 (Feedback): [Overview] Algaterra search functionality
Andreas Müller
02:15 PM task #3996: [Overview] Algaterra search functionality
It has been decided not to migrate AlgaTerra.
Should we keep this ticket somehow or close it?
Andreas Müller
02:25 PM task #3241 (Feedback): favicon for algaterra
Andreas Müller
02:25 PM task #3241: favicon for algaterra
Is this ticket stil needed? Andreas Müller
02:24 PM feature request #3444 (Feedback): Don't show empty General Tab
Should we keep this ticket and move it elsewhere or close it? Andreas Müller
02:14 PM task #9251: Specimenview path: better representation of RecordBasis
AT migration was not the correct target version. Andreas Müller
02:02 PM feature request #3347 (Feedback): services and REST service controller for molecular classes implemented
Is this still an open issue? If yes, we should move it to another milestone. Andreas Müller
01:35 PM bug #9649 (In Progress): Specimens sometimes have empty titleCache instead of class<UUID>
Maybe fixed by #9665 . Need to check after release if this still happens. Andreas Müller
01:24 PM bug #9665 (Resolved): Filter out property change event for created and updated and cacheStrategy
fixed, will be merged into develop with uml 5.25 Andreas Müller
01:20 PM bug #9665 (Closed): Filter out property change event for created and updated and cacheStrategy
Currently these events (created and updated) are fired by the CdmPreDataChange Listener which results in setting titl... Andreas Müller
01:13 PM bug #7817 (Duplicate): Team caches should not show '& al.'
duplicates #9326, #9464 and #9624 Andreas Müller
09:57 AM feature request #9655 (Resolved): When adding a new team member open search dialogue immediately
this is fixed now, please review. Katja Luther

06/10/2021

03:42 PM feature request #9664 (Resolved): Add nomenclaturalTitleCache to TeamOrPersonBase
Similar to collectorTitle(Cache) we need a cache for nomenclaturalTitle in Person, too.
This is to make it possible ...
Andreas Müller
10:53 AM bug #9663: Remove additional text from media title
please review. Katja Luther
10:52 AM bug #9663 (Resolved): Remove additional text from media title
Applied in changeset commit:cdmlib|e3e87f678eff890bf1f0f478d4973a0b0e6f70de. Katja Luther
10:30 AM bug #9663 (Closed): Remove additional text from media title
mail NK:
Könnte nicht von vornherein dafür gesorgt werde, dass bei der Generierung des Bilddatenamens im "Titel"-C...
Katja Luther
09:44 AM bug #9662 (New): CDMLight: Output should summarize all MAN with same name and err. sec
mail WB:
Aber hierzu noch der Wunsch, dass die MAN-sensu Referenzen zusammengefasst werden, wenn der Name und die ...
Katja Luther
09:36 AM bug #9661 (New): Add possibility to clone a MAN
As long as it is not possible to add more than one sensu reference to a MAN, the users need to add more than one MAN ... Katja Luther
08:42 AM feature request #9270: show original spelling on taxon page
Andreas Müller wrote:
> should we close this as duplicate (for #7781)?
??
Andreas Müller

06/09/2021

07:08 PM bug #9657: OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon fails with HibernateException: More than one row with the given identifier was found: 51
Andreas Müller wrote:
> Please review. The page shows no error anymore: http://portal.cybertaxonomy.org/flora-malesi...
Andreas Müller
03:44 PM bug #9657: OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon fails with HibernateException: More than one row with the given identifier was found: 51
Please review. The page shows no error anymore: http://portal.cybertaxonomy.org/flora-malesiana-prospective/cdm_datap... Andreas Müller
03:42 PM bug #9657 (Resolved): OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon fails with HibernateException: More than one row with the given identifier was found: 51
I checked in old databases from 12_2020 (before nomenclatural sources movement) and 04_2021 (before deleting old Taxo... Andreas Müller
01:41 PM bug #9657: OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon fails with HibernateException: More than one row with the given identifier was found: 51
Strange is, this problem exists only in flora_malesiana_prospective. In no other production database such duplicate r... Andreas Müller
01:25 PM bug #9657: OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon fails with HibernateException: More than one row with the given identifier was found: 51
But there are multiple nomSources that link to the same name:
~~~
SELECT *
FROM OriginalSourceBase osb
WHERE o...
Andreas Müller
01:15 PM bug #9657: OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon fails with HibernateException: More than one row with the given identifier was found: 51
I tested by calling
~~~
appCtr.getOccurrenceService().findRootUnitDTOs(UUID.fromString("2debf5ee-cb57-40bc-af89-1...
Andreas Müller
05:51 PM feature request #7309: Implement collectorTitle and collectorTitleCache and the same for nomenclatural title in tax editor
I will implement the update script now so we also need the fields in taxeditor Andreas Müller
01:32 PM feature request #9655: When adding a new team member open search dialogue immediately
The classes which are involved in creating the new element are:
AbstractUnboundEntityCollectionSection.java and Te...
Katja Luther
10:31 AM feature request #9655: When adding a new team member open search dialogue immediately
Andreas Müller wrote:
> Katja Luther wrote:
> > This is not as easy as it seems because the framework of these coll...
Katja Luther
10:12 AM feature request #9655: When adding a new team member open search dialogue immediately
Katja Luther wrote:
> This is not as easy as it seems because the framework of these collection details views bases ...
Andreas Müller
10:07 AM feature request #9655 (In Progress): When adding a new team member open search dialogue immediately
This is not as easy as it seems because the framework of these collection details views bases on creating a dummy ele... Katja Luther
12:33 PM bug #9660 (New): Define which namerelationships are shown and with which label in DB preference
Preferences for Namerelationshipship output should contain informations about:
* which relationships should be sho...
Katja Luther
11:17 AM feature request #9647: After deduplication the remaining record should get the focus in bulk editor
This should be fixed, please review. Katja Luther
11:13 AM feature request #9647 (Resolved): After deduplication the remaining record should get the focus in bulk editor
Applied in changeset commit:taxeditor|5924653e4dd6d9ae695675b7ee5a6f98856a9199. Katja Luther
08:55 AM task #9659 (Closed): External Links Module reimplemented for flexible configuration
The links in the *External Links Module* are hard-coded. Adding or changing links always involves developers to take ... Andreas Kohlbecker

06/08/2021

08:45 PM task #9650: Update all titleCaches after upgrade of cache strategies and formatters
Updated all databases except for col, euromed, euromed_caucasus and vibrant_index names/taxa/specimen Andreas Müller
05:46 PM task #9364 (Closed): Cleanup authors with multiple & and protected names and teams
protected (title)caches moved to new ticket #9658.
All "multiple &" solved.
Potentially dangerous protected cac...
Andreas Müller
05:43 PM task #9658: Cleanup authors with protected names and authors
Protected Teams(nomenclaturalTitle):
AlgaTerra: >14000
Cichorieae: 8487
Cuba: 14
Campanula: 1171
Caryo_amarant...
Andreas Müller
05:43 PM task #9658: Cleanup authors with protected names and authors
Protected Names (still without fulltitlecache and authorshipcache):
Bromeliaceae: 584
Cichorieae: 476
Cuba: 567
...
Andreas Müller
05:42 PM task #9658 (New): Cleanup authors with protected names and authors
copied from #9364
In some databases there are many names with protected caches which may lead to problems when sea...
Andreas Müller
03:52 PM bug #9657 (Closed): OccurrenceServiceImpl.listRootUnitDTOsByAssociatedTaxon fails with HibernateException: More than one row with the given identifier was found: 51

http://api.cybertaxonomy.org/flora-malesiana-prospective/portal/taxon/2debf5ee-cb57-40bc-af89-173d1d17cefe/rootUnit...
Andreas Kohlbecker
11:44 AM bug #9651: After creating a new MAN the details view is filled with other MAN
This problem was caused by setting the focus everytime the name editor is refreshed and all containers are redrawed. ... Katja Luther
11:39 AM bug #9651 (Resolved): After creating a new MAN the details view is filled with other MAN
Applied in changeset commit:taxeditor|1b62813be8ba0f6f5cde2384147c62f0c913f1b6. Katja Luther
11:40 AM bug #9654: Deleting a synonym which has no name throws exception
this should be fixed with the last commit, please review. Katja Luther
09:17 AM bug #9654 (Resolved): Deleting a synonym which has no name throws exception
Applied in changeset commit:cdmlib|0bc2d77330a70a6115316b914b952657f990c624. Katja Luther
11:31 AM bug #9656 (New): Closing the referencing objects view should cancel the current request
Sometimes request take long because a record has many referencing objects. The easiest way to stop this seems to be c... Andreas Müller
08:52 AM feature request #9655 (Closed): When adding a new team member open search dialogue immediately
Currently one has to first push the +-button and then the search button but the search button is the only button to p... Andreas Müller

06/07/2021

10:06 PM bug #9654 (Closed): Deleting a synonym which has no name throws exception
When deleting a synonym (maybe also a taxon) an undefined exception is thrwon "Error thrown but no associated excepti... Andreas Müller
05:22 PM bug #9358: OptionalDataException during HTTP invoker call
Auch bei Cuba trat das Problem jetzt wieder bei der Eingabe von **Verbreitungsdaten** auf:
~~~
WGB:
erster Ein...
Andreas Müller
04:51 PM bug #9629: Better handling of OptionalDataException
You could e.g. recursively iterate through exception e and its causes e.getCause() and check all these exceptions for... Andreas Müller
04:45 PM bug #9629: Better handling of OptionalDataException
For testing you could manually throw an OptionalDataException and try to catch it correctly. Andreas Müller
04:43 PM bug #9629 (Feedback): Better handling of OptionalDataException
Reopen this ticket. Using toString is incorrect method to check if an exception is in the stacktrace.
exception.to...
Andreas Müller
11:29 AM task #9653 (New): update system table with new installation profile name and location
The installation profile `CDM_Portal` has been renamed to `cdm_portal`. Now Drupal complains with a User warning: "Th... Andreas Kohlbecker
11:20 AM feature request #9652 (New): instances status report web service
For many devOp use cases it is important to know
* if all instances have been successfully started
This web ser...
Andreas Kohlbecker
10:07 AM bug #9651 (Closed): After creating a new MAN the details view is filled with other MAN
mail WB:
Hallo,
es geht um die EIngabe eines MAN mit dem gleichen Namen wie ein bereits bestehender MAN (derzeit...
Katja Luther
 

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