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From 05/05/2021 to 06/03/2021

06/03/2021

02:46 PM task #9650 (In Progress): Update all titleCaches after upgrade of cache strategies and formatters
Before the databases need to be checked for data dirty data which could be overwritten by cache update (e.g. referenc... Andreas Müller
01:48 PM bug #9649 (Resolved): Specimens sometimes have empty titleCache instead of class<UUID>
E.g. in additiviy_ontology after running titleCache update for records 72 and 74 Andreas Müller
01:37 PM task #9648 (New): Remove duplicated extensions
In cichorieae (maybe also E+M) some reference records had a large number of similar extensions.
Most of them (in cic...
Andreas Müller
01:00 PM feature request #9647 (Closed): After deduplication the remaining record should get the focus in ...
this is helpful when working on longer lists because after save the list jumps to the beginning otherwise Andreas Müller
10:39 AM feature request #8476 (Closed): Implement support for TermCollection.isFlat in TaxEditor
This seems to be fully fixed now. I move it back to 5.24 as it was fixed there.
Only open issue (menu) was moved to ...
Andreas Müller
08:23 AM bug #9646 (Resolved): CDM Light: Add name relationship to concatenated string for homotypic group
mail WB:
Name relationships werden in der Konkatenierung der homotypischen Gruppen in CDM-Light nicht berücksichti...
Katja Luther
08:21 AM bug #9645 (Closed): CDM Light: Add Type Statement Reference to homotypicalGroup.csv
mail WB:
Hallo,
diese Referenz haben wir offenbar in homotypicGroup.csv vergessen. Die ist für Cuba ziemlich wich...
Katja Luther

06/02/2021

03:10 PM Revision 85326264 (taxeditor): ref #9448: remove E4 from file names - bulkeditor continue
Katja Luther
03:06 PM Revision 865e32f6 (taxeditor): ref #9448: remove E4 from file names - adapt fragment.e4xmi
Katja Luther
01:23 PM Revision 8a6625ad (taxeditor): ref #9448: remove E4 from file names - continue
Katja Luther
01:20 PM Revision a6d3d9c5 (taxeditor): ref #9448: remove E4 from file names - supplementalDataView
Katja Luther
01:16 PM Revision bbae6889 (taxeditor): ref #9448: remove E4 from file names - coninue and cleanup
Katja Luther
12:47 PM Revision 45e18d0e (taxeditor): code cleaning
Katja Luther
12:34 PM Revision 38e9eb06 (taxeditor): ref #9448: remove E4 from file names - cdmViewer
Katja Luther
12:30 PM Revision 3eb83ba9 (cdm-dataportal): making ci scripts executable
Andreas Kohlbecker
12:30 PM Revision 1645f1e2 (taxeditor): ref #9448: remove E4 from file names - bulkeditor continue
Katja Luther
12:27 PM Revision 843eefc4 (taxeditor): ref #9448: remove E4 from file names - bulkeditor package
Katja Luther
12:24 PM Revision c47199f3 (cdm-dataportal): Merge branch 'release/5.24.0' into develop
jenkins
12:24 PM Revision 85f6952f (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
12:24 PM Revision 4bb90f2f (cdm-dataportal): updating poms for branch'release/5.24.0' with non-snapshot ve...
jenkins
12:24 PM Revision 803fc583 (cdm-dataportal): release-preparation: production level css
jenkins
12:13 PM Revision c58e5687 (cdm-dataportal): updating poms for 5.25.0-SNAPSHOT development
jenkins
12:08 PM Revision fa228679 (taxeditor): ref #9448: remove E4 from file names - continue
Katja Luther
12:04 PM Revision 2611dff9 (taxeditor): ref #9448: remove E4 from file names
Katja Luther
11:50 AM Revision 0d88bbd4 (taxeditor): Merge branch 'release/5.24.0' into develop
jenkins
11:50 AM Revision 031baf62 (taxeditor): Merge branch 'release/5.24.0'
jenkins
11:48 AM Revision da969bb3 (cdm-dataportal): release-preparation: production level css
jenkins
11:45 AM Revision 717af2aa (cdm-server): Merge branch 'release/5.24.0' into develop
jenkins
11:45 AM Revision f780fcfc (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
11:44 AM Revision a2edd9ec (cdm-server): updating poms for branch'release/5.24.0' with non-snapshot versions
jenkins
11:42 AM Revision ef93e952 (cdm-webapp): Merge branch 'release/5.24.0' into develop
jenkins
11:42 AM Revision 13e17276 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
11:42 AM Revision 06c02838 (cdm-webapp): updating poms for branch'release/5.24.0' with non-snapshot versions
jenkins
11:42 AM Revision c1e7bfd3 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.24.0
jenkins
11:42 AM Revision 36a499c6 (cdm-vaadin): Merge branch 'release/5.24.0' into develop
jenkins
11:42 AM Revision 81415a2d (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
11:38 AM Revision ba1014bf (cdm-vaadin): updating poms for branch'release/5.24.0' with non-snapshot versions
jenkins
11:37 AM Revision 13817a25 (cdm-vaadin): jenkins bumping cdmlib.version to 5.24.0
jenkins
11:32 AM bug #9630 (Closed): Make the handling of computed description configurable
Code is cleaned up. I check the structured descriptions and create a new ticket if necessary. Katja Luther
11:25 AM Revision 59fa4a9b (cdmlib): Updating develop poms back to pre merge state
jenkins
11:25 AM Revision 3a298583 (cdmlib): Merge branch 'master' into develop
jenkins
11:25 AM Revision 627867d1 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
11:25 AM Revision def9db7a (cdmlib): Merge branch 'release/5.24.0'
jenkins
11:09 AM Revision 512616ce (cdmlib): updating poms for branch'release/5.24.0' with non-snapshot versions
jenkins
11:06 AM Revision 6ab495c1 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.24.0-S...
jenkins
11:06 AM Revision 1f268784 (cdm-webapp): updating poms for 5.25.0-SNAPSHOT development
jenkins
11:06 AM Revision ff128f85 (cdm-webapp): updating poms for 5.24.0 branch with snapshot versions
jenkins
11:05 AM Revision 463f5c7b (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.25.0-S...
jenkins
11:03 AM Revision 2e85a104 (cdm-vaadin): jenkins bumping cdmlib.version to 5.24.0-SNAPSHOT
jenkins
11:03 AM Revision 0ebe4a8b (cdm-vaadin): updating poms for 5.24.0 branch with snapshot versions
jenkins
11:03 AM Revision 92e8e83e (cdm-vaadin): updating poms for 5.25.0-SNAPSHOT development
jenkins
11:03 AM Revision abde3bb8 (cdm-vaadin): jenkins bumping cdmlib.version to 5.25.0-SNAPSHOT
jenkins
10:59 AM Revision b43ac178 (cdm-vaadin): jenkins bumping cdmlib.version to 5.25.0-SNAPSHOT
jenkins
10:59 AM Revision 43e40bda (cdm-vaadin): jenkins bumping cdmlib.version to 5.26.0-SNAPSHOT
jenkins
10:56 AM Revision d9d02bca (cdm-vaadin): updating poms for 5.25.0-SNAPSHOT development
jenkins
10:56 AM Revision 8baba0a0 (cdm-vaadin): updating poms for 5.24.0 branch with snapshot versions
jenkins
10:56 AM Revision e974b018 (cdm-vaadin): jenkins bumping cdmlib.version to 5.25.0-SNAPSHOT
jenkins
10:56 AM Revision 7fbd6a6c (cdm-server): updating poms for 5.25.0-SNAPSHOT development
jenkins
10:56 AM Revision 37d8780f (cdm-dataportal): updating poms for 5.25.0-SNAPSHOT development
jenkins
10:55 AM Revision 06b435a4 (taxeditor): Updated version in pom / project files to taxeditor version : 5.25...
jenkins
10:55 AM Revision 2ee57d46 (taxeditor): Updated version in pom / project files to taxeditor version : 5.24...
jenkins
10:51 AM Revision ef97cad1 (cdmlib): updating poms for 5.25.0-SNAPSHOT development
jenkins
10:41 AM bug #9642 (Closed): hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
Done Andreas Kohlbecker
10:20 AM bug #9642: hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
>
> >
> > >I guess there is still a test to be adapted?
> >...
Andreas Müller
10:16 AM bug #9642 (Feedback): hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
Andreas Müller wrote:

>
> >I guess there is still a test to be adapted?
>
> whyt exactly do you mean?
Isn...
Andreas Kohlbecker
09:15 AM bug #9642: hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
But I removed the order by from the media specimen sql. As this query always returns max 1 result order by is not nec... Andreas Müller
09:13 AM bug #9642: hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
Andreas Kohlbecker wrote:
> In principle OK. In case of MediaSpecimens the list of Media ids collected by `getMediaI...
Andreas Müller
08:46 AM bug #9642: hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
In principle OK. In case of MediaSpecimens the list of Media ids collected by `getMediaIds()` is sorted twice: fist b... Andreas Kohlbecker
10:40 AM Revision 678da343 (cdm-dataportal): ref #9642 adapting test method to more media appearing in the...
Andreas Kohlbecker
10:17 AM Revision 57a53d78 (taxeditor): fix #8476: fix paste not allowed for nodes if tree is flat
Katja Luther
10:17 AM feature request #8476: Implement support for TermCollection.isFlat in TaxEditor
Applied in changeset commit:taxeditor|57a53d78c9cac39492c450ea46b24dc207de55fc. Katja Luther
09:04 AM feature request #8476 (Resolved): Implement support for TermCollection.isFlat in TaxEditor
Andreas Müller wrote:
> Please also test for d&d from vocabulary editor. I have not tested yet.
With the last com...
Katja Luther
10:09 AM Revision 02c718f2 (taxeditor): ref #8776: correct enable/disable allowDuplicates
Katja Luther
10:08 AM Revision 37f2b410 (cdmlib): ref #8776: fix contains duplicates in dto
Katja Luther
09:15 AM Revision 7c47b73f (cdmlib): ref #9642 remove unnecessary order by
Andreas Müller
09:01 AM Revision 12e7c169 (taxeditor): ref #8476: fix d&d in flat tree and cleanup
Katja Luther
08:24 AM bug #9641 (Closed): NameTypeDesignationEditor: LIE related to typifiedNames.nomenclaturalSource
Andreas Kohlbecker

06/01/2021

10:40 PM bug #9630 (Resolved): Make the handling of computed description configurable
Works now as expected for distributions but needs to be tested for structured descriptions (open new ticket if necess... Andreas Müller
03:04 PM bug #9630: Make the handling of computed description configurable
Katja Luther wrote:
> Andreas Müller wrote:
> > The detail fields in timescope are still editable with "disabled"
...
Andreas Müller
02:48 PM bug #9630: Make the handling of computed description configurable
Andreas Müller wrote:
> The detail fields in timescope are still editable with "disabled"
In my local installatio...
Katja Luther
02:42 PM bug #9630: Make the handling of computed description configurable
Andreas Müller wrote:
> Andreas Müller wrote:
> > And supplemental data of *not*-computed dara are not editable wit...
Katja Luther
02:31 PM bug #9630: Make the handling of computed description configurable
Andreas Müller wrote:
> And supplemental data of *not*-computed dara are not editable with "disabled"
... but onl...
Andreas Müller
02:30 PM bug #9630: Make the handling of computed description configurable
And supplemental data of *not*-computed dara are not editable with "disabled" Andreas Müller
02:28 PM bug #9630: Make the handling of computed description configurable
The detail fields in timescope are still editable with "disabled" Andreas Müller
10:36 AM bug #9630: Make the handling of computed description configurable
Andreas Müller wrote:
> When "disabled" is selected, timescope is still editable (I have only checked distributions...
Katja Luther
10:05 AM bug #9630: Make the handling of computed description configurable
"Invisible" works as expected Andreas Müller
10:04 AM bug #9630: Make the handling of computed description configurable
When "disabled" is selected, timescope is still editable (I have only checked distributions no other descriptions) Andreas Müller
09:54 AM bug #9630 (Feedback): Make the handling of computed description configurable
When selection is "Enabled" the supplemental data and the sources are still disabled. Tested with rem_conf_am/->Speci... Andreas Müller
10:33 PM bug #9644 (Closed): fix NPE in term selection
works as expected. Andreas Müller
10:32 PM bug #9644 (Resolved): fix NPE in term selection
Applied in changeset commit:taxeditor|5bdd89de5a89aca16929c174a3f22e7f0680a4b1. Andreas Müller
10:30 PM bug #9644 (Closed): fix NPE in term selection
An NPE is thrown if a term is deselected in the term selection dialog for term tree items. Andreas Müller
10:32 PM Revision 4334327a (taxeditor): cleanup
Andreas Müller
10:32 PM Revision 5bdd89de (taxeditor): fix #9644 fix NPE in term selection
Andreas Müller
10:15 PM feature request #8474 (Closed): Make TermCollection.orderRelevant usable for TermTrees
This seems to be completely fixed. Maybe you can find out when the last relevant commit was and attache the ticket to... Andreas Müller
10:11 PM bug #8776 (Closed): Open issues for TermCollection.allowDuplicates handling in TaxEditor
Seems to work as expected now. Andreas Müller
11:07 AM bug #8776 (Feedback): Open issues for TermCollection.allowDuplicates handling in TaxEditor
Everything works, only there is one open issue which was not yet on the list: d&d from a vocabulary is still possible... Andreas Müller
10:13 AM bug #8776 (Resolved): Open issues for TermCollection.allowDuplicates handling in TaxEditor
please review Katja Luther
09:53 PM feature request #8476: Implement support for TermCollection.isFlat in TaxEditor
Please also test for d&d from vocabulary editor. I have not tested yet. Andreas Müller
09:52 PM feature request #8476 (Feedback): Implement support for TermCollection.isFlat in TaxEditor
d&d is still available for moving a term to become a child of another term node. Instead the "is flat" flag is disabl... Andreas Müller
09:39 PM feature request #9643 (New): New menu in term tree editor should have alternatives for flags
copied from #8476, #8474 (and #8776, not really mentioned there)
But as there are 3 flags there is a larger number...
Andreas Müller
07:32 PM bug #9641: NameTypeDesignationEditor: LIE related to typifiedNames.nomenclaturalSource
opening, saving, editing is working without problems for new and old records. Ticket can be closed. Wolf-Henning Kusber
02:31 PM bug #9641: NameTypeDesignationEditor: LIE related to typifiedNames.nomenclaturalSource
no errors yet, seems to be correct, but I need to check more examples. Wolf-Henning Kusber
12:57 PM bug #9641: NameTypeDesignationEditor: LIE related to typifiedNames.nomenclaturalSource
please review on the test system Andreas Kohlbecker
12:47 PM bug #9641 (Resolved): NameTypeDesignationEditor: LIE related to typifiedNames.nomenclaturalSource
Applied in changeset commit:cdm-vaadin|830b420d4d141be5056606b0524e0706c62f3f87. Andreas Kohlbecker
12:45 PM bug #9641 (Closed): NameTypeDesignationEditor: LIE related to typifiedNames.nomenclaturalSource
Test System
Genus = Sabbea (published, orig. des.) --> open NameTypeDesignation Editor
~~~
Caused by: org.hi...
Andreas Kohlbecker
06:58 PM feature request #6718: Constistent TypeDesignation representation creation
not related to a target version Andreas Müller
06:54 PM task #9291: Clear all unnecesary TypeDesignation.citation entities and citationDetails
"Data" tickets are usually not related to a target version once they are fixed. Therefore I remove it. Andreas Müller
05:05 PM bug #9642: hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
please review Andreas Müller
05:05 PM bug #9642: hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
The method countMedia and getMedia in OccurrenceImpl was not correctly updated after media was removed from SpecimenO... Andreas Müller
05:01 PM bug #9642 (Resolved): hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
Applied in changeset commit:cdmlib|d6a8517c4b8892a03e449dfe3c751036ee570bd6. Andreas Müller
02:00 PM bug #9642 (Closed): hibernate.QueryException in OccurrenceDaoHibernateImpl.countMedia()
~~~
12:55:00.629 [flora-malesiana] [qtp1511785794-17712] INFO e.e.c.r.c.DerivedUnitFacadeController - doGetFieldObj...
Andreas Kohlbecker
05:01 PM Revision d6a8517c (cdmlib): fix #9642 fix countMedia and getMedia in OccurrenceDaoHibernateImpl
Andreas Müller
04:37 PM Revision 2daf0f0b (taxeditor): ref #9630: setEnabled to source section
Katja Luther
04:00 PM Revision 093e7cd5 (taxeditor): ref #8776, #9630: d&d from voc to tree and disable time period if ...
Katja Luther
03:53 PM Revision 9020f8ff (cdmlib): ref #8776: add all terms of the hierarchy to the list of the treeDto
Katja Luther
03:20 PM Revision 9398c95d (taxeditor): cleanup
Andreas Müller
12:47 PM Revision 830b420d (cdm-vaadin): fix #9641 adding init strategy for typifiedNames.nomenclaturalSou...
Andreas Kohlbecker
12:05 PM Revision 33f8af3e (taxeditor): ref #9630: default value for enable description element source is ...
Katja Luther
11:57 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
New Ticket: #9640 Wolf-Henning Kusber
11:57 AM feature request #9640 (New): Updated List ICN/ICBN editions
As a first step, here is an update for the list.
This is a follow-up to ticket #9618
The new list is based on the...
Wolf-Henning Kusber
10:36 AM Revision 13555b11 (taxeditor): ref #9630: fix time period disabling and supplemental data enabling
Katja Luther
10:16 AM bug #9638 (Closed): remove trailing full stops from reference titleCaches
Andreas Müller
10:16 AM feature request #9639 (Closed): Replace fullAbbreviatedTitleCache by nomenclaturalTitleCache for ...
Andreas Müller
09:39 AM feature request #9639 (Resolved): Replace fullAbbreviatedTitleCache by nomenclaturalTitleCache fo...
Andreas Müller
09:50 AM Revision bfcdd64e (taxeditor): ref #8776: fix d&d check for duplicates
Katja Luther
09:10 AM Revision 436645ad (taxeditor): ref #8952: adapt labels for open in menu to dataset
Katja Luther
08:45 AM Revision e7075148 (cdm-dataportal): adapting to recent reference cache strategy changes
Andreas Kohlbecker

05/31/2021

10:54 PM Revision 621a4c45 (cdmlib): ref #9639 make NomenclaturalSourceFormatter serializable
Andreas Müller
10:30 PM Revision 71be5a6e (cdmlib): ref #9639 replace fullAbbreviatedTitleCache by nomenclaturalTitleCach...
Andreas Müller
10:28 PM feature request #9639 (Closed): Replace fullAbbreviatedTitleCache by nomenclaturalTitleCache for ...
Andreas Müller
10:23 PM bug #9638 (Resolved): remove trailing full stops from reference titleCaches
Andreas Müller
04:00 PM bug #9638 (Closed): remove trailing full stops from reference titleCaches
Andreas Müller
06:18 PM Revision d0d49268 (cdmlib): passing missing maxDepth parameter
Andreas Kohlbecker
04:58 PM task #9291 (Closed): Clear all unnecesary TypeDesignation.citation entities and citationDetails
1760 cases cleaned Andreas Kohlbecker
04:38 PM bug #9368 (Closed): NullPointerException (NPE) in ManifestComposer.representationPartsToImageCon...
tested at http://test.e-taxonomy.eu/cdmserver/cichorieae/iiif/taxon/aecd40ae-b77d-495b-a63f-a294c8287089/manifest?typ... Andreas Kohlbecker
02:25 PM bug #9368 (Resolved): NullPointerException (NPE) in ManifestComposer.representationPartsToImageC...
Applied in changeset commit:cdmlib|7d7ffcf03bdb83d494cc09fdbd1c715353b634cd. Andreas Kohlbecker
04:35 PM bug #9635 (Closed): LazyInitializationException (LIE) in TaxonPortalContoller
works: http://test.e-taxonomy.eu/cdmserver/cichorieae/portal/taxon/find.json?doTaxaByCommonNames=1&doMisappliedNames=... Andreas Kohlbecker
01:56 PM bug #9635 (Resolved): LazyInitializationException (LIE) in TaxonPortalContoller
Applied in changeset commit:cdmlib|1502b93925149b7602fbc039d141ea2faf234af1. Andreas Kohlbecker
04:19 PM Revision 19617222 (cdmlib): ref #9638 remove trailing dots from ref caches (cont.)
Andreas Müller
04:02 PM Revision 02802740 (cdmlib): ref #9638 remove trailing dots from ref caches
Andreas Müller
04:02 PM Revision beab3950 (cdmlib): ref #3764 correct handling of series and volume for section with journal
Andreas Müller
04:02 PM Revision 2300c416 (cdmlib): cleanup
Andreas Müller
04:02 PM Revision b3ef6288 (cdmlib): add memory warning to report in long running tasks
Andreas Müller
04:02 PM Revision b1f26557 (cdmlib): cleanup
Andreas Müller
03:47 PM Revision e7849426 (taxeditor): ref #8776: revert d&d check for duplicates
Katja Luther
03:47 PM Revision b208934b (taxeditor): ref #8776: paste should only available if it is allowed.
Katja Luther
03:13 PM Revision 4c59df2f (cdmlib): renaming local vars pageNumber -> pageIndex
Andreas Kohlbecker
03:13 PM task #9637 (New): overcome mixed use of pageNumber and pageIndex
some controller methods are still using "pageNumber".
This should be replaces in all cases by "pageIndex"
Adapt...
Andreas Kohlbecker
03:05 PM bug #9151 (Closed): invalid pager information in /description/namedAreasInUse webservice
Andreas Kohlbecker
02:51 PM bug #9151 (Resolved): invalid pager information in /description/namedAreasInUse webservice
Applied in changeset commit:cdmlib|b5ddcca9e3953f3fa88188e6f28e171bd40bdf96. Andreas Kohlbecker
02:51 PM Revision b5ddcca9 (cdmlib): fix #9151 fixing deprecated use of pageNumber
Andreas Kohlbecker
02:25 PM Revision 7d7ffcf0 (cdmlib): fix #9368 NullPointerException (NPE) in ManifestComposer
Andreas Kohlbecker
02:20 PM bug #9630 (Resolved): Make the handling of computed description configurable
I think now it works, please review Katja Luther
01:56 PM Revision 1502b939 (cdmlib): fix #9635 #adding missing init strategy path for misapplications
Andreas Kohlbecker
01:06 PM bug #9398 (Closed): ObjectNotFoundException when removing a synonym that is used as NameInSource
works as expected Andreas Müller
12:47 PM Revision f736095f (taxeditor): cleanup
Andreas Müller
12:40 PM bug #9629 (Closed): Better handling of OptionalDataException
This is difficult to review as I can't create the exception that shows if it works or not. However, the code looks ok... Andreas Müller
12:35 PM Revision f2b0935d (taxeditor): ref #9629 adapting message string
Andreas Müller
12:35 PM Revision 909ec578 (taxeditor): cleanup
Andreas Müller
11:30 AM Revision f37fa367 (taxeditor): ref #8776: fix d&d for not allow duplicates
Katja Luther
10:58 AM Revision b1d5c0e2 (taxeditor): ref #8776: disable allowDuplicate flag if tree contains duplicates
Katja Luther
10:50 AM feature request #8474: Make TermCollection.orderRelevant usable for TermTrees
most of the topics are already fixed in the meanwhile. Katja Luther
10:26 AM Revision 3d3a68f0 (taxeditor): ref #8476: disable flat flag if tree has subtrees
Katja Luther
10:24 AM Revision 8acf6617 (cdmlib): ref #8476: add check for subtrees
Katja Luther
09:45 AM Revision 5accd008 (cdm-dataportal): more secure location for backups
Andreas Kohlbecker
09:37 AM Revision e866a450 (taxeditor): ref #8476: do not allow d&d to a child
Katja Luther
09:24 AM Revision 88b50562 (taxeditor): ref #8476: do not show create child if tree is flat
Katja Luther
08:37 AM bug #9636 (Closed): NPE in DeterminationDetailElement
Checked all kind of specimen and field unit and it worked as expected. Katja Luther

05/28/2021

08:34 PM bug #9636: NPE in DeterminationDetailElement
Please review. Andreas Müller
08:33 PM bug #9636 (Resolved): NPE in DeterminationDetailElement
Applied in changeset commit:taxeditor|c7641204b013ae501d942505847201e7617d4d66. Andreas Müller
08:30 PM bug #9636 (Closed): NPE in DeterminationDetailElement
this is due to changes in CdmSectionPart.setFormInput() with commit 8aaabf5035f where derivedUnitFacade is replaced b... Andreas Müller
08:33 PM Revision c7641204 (taxeditor): fix #9636 fix NPE in DeterminationDetailElement
Andreas Müller
08:33 PM Revision ac70dabe (taxeditor): cleanup and set cancelable to true SetXXXForSubtreeOperations
Andreas Müller
04:11 PM Revision 934b40da (cdm-dataportal): Merge branch 'develop' into support/5.23.1
Andreas Kohlbecker
04:07 PM Revision 32a930c7 (cdm-dataportal): updating README
Andreas Kohlbecker
03:57 PM Revision 6dc2f272 (cdm-dataportal): fixing bug in update script
Andreas Kohlbecker
03:33 PM Revision b2e56eb8 (cdm-dataportal): update script improved
Andreas Kohlbecker
03:21 PM Revision 05d5bae9 (cdm-dataportal): un pinning drupal/drupal version
Andreas Kohlbecker
02:59 PM Revision fd9f41ae (cdm-dataportal): update script improved
Andreas Kohlbecker
02:43 PM Revision a6c0342d (cdm-dataportal): update script improved
Andreas Kohlbecker
01:44 PM Revision 93513495 (cdm-dataportal): update script improved
Andreas Kohlbecker
12:57 PM Revision 173745e8 (cdm-dataportal): update script improved
Andreas Kohlbecker
12:00 PM Revision fab7562d (cdmlib): fix #9398: when delete synonym but name is not deletable, add name to...
Katja Luther
12:00 PM bug #9398 (Resolved): ObjectNotFoundException when removing a synonym that is used as NameInSource
Applied in changeset commit:cdmlib|fab7562d10933769c27f26176f401cb92d75e234. Katja Luther
11:45 AM Revision e728e2eb (cdm-dataportal): adding update script
Andreas Kohlbecker
11:44 AM Revision c1f181ba (cdm-dataportal): update instructions continued
Andreas Kohlbecker
09:55 AM Revision 85f3df99 (taxeditor): ref #9630: avoid IAE continue
Katja Luther
09:53 AM Revision 49fc34f0 (cdmlib): ref #9630: override toString()
Katja Luther
09:02 AM bug #9630 (In Progress): Make the handling of computed description configurable
Katja Luther

05/27/2021

04:06 PM bug #9635 (Closed): LazyInitializationException (LIE) in TaxonPortalContoller
http://api.cybertaxonomy.org/euromed/portal/taxon/find.json?doTaxaByCommonNames=1&doMisappliedNames=1&doSynonyms=1&do... Andreas Kohlbecker
03:55 PM bug #9634 (Closed): Update AgentBase and DescriptiveDataSet titleCache length where needed
In some databases the AgentBase titleCache has only length 255, not 800. Also the DescriptiveDataSet titleCache has u... Andreas Müller
03:29 PM Revision bac6e6b4 (taxeditor): ref #9629: handle OptionalDataException - continue
Katja Luther
02:24 PM bug #9600 (In Progress): Delete of taxon with unselected name delete returns warning
The exceptions where caused by the names of the synonyms (but there are more messages than synonyms, this needs to be... Katja Luther
12:02 PM Revision bc2df6ea (taxeditor): ref #9630: make computed descriptions handling configurable - avoi...
Katja Luther
11:46 AM bug #9629 (Resolved): Better handling of OptionalDataException
the exception is hanlded now, please review. Katja Luther
11:45 AM Revision ab79a3ac (taxeditor): ref #9629: handle OptionalDataException
Katja Luther
11:12 AM bug #9630 (Resolved): Make the handling of computed description configurable
this is fixed, please review. Katja Luther
10:47 AM Revision 7fcccab7 (taxeditor): ref #9630: make computed descriptions handling configurable - adap...
Katja Luther
10:45 AM Revision 12521139 (taxeditor): ref #9630: make computed descriptions handling configurable - adap...
Katja Luther

05/26/2021

03:51 PM Revision 0ab60230 (taxeditor): ref #9630: make computed descriptions handling configurable
Katja Luther
03:39 PM Revision 3012f271 (cdmlib): ref #9630: add PreferencePredicate for computed Descriptions
Katja Luther

05/21/2021

06:26 PM Revision 7650207f (cdmlib-apps): adaptions to 5.23 and prior
Andreas Müller
06:04 PM Revision db6d83d6 (cdm-dataportal): pinning drupal version to 7.62 for testing
Andreas Kohlbecker
06:04 PM Revision 2776ab75 (cdm-dataportal): update instructions continued
Andreas Kohlbecker
02:55 PM bug #9588 (Closed): Specimen Tree View: Duplicate derivatives
The link in the ticket description works now as expected so we can close this ticket. Andreas Müller
11:45 AM Revision 53d2daf2 (cdmlib): ref #5573: remove resetTitleCache in setMedia()
Katja Luther
11:43 AM Revision eb34070d (taxeditor): ref #5573: call resetTitleCache after changing media
Katja Luther
11:36 AM Revision e47983d4 (cdmlib): minor cleanup
Andreas Müller
11:29 AM Revision ea53c256 (cdmlib): ref #9622 remove setTaskName and done from aggregate()
Andreas Müller
11:14 AM Revision f7182054 (cdmlib): minor
Andreas Müller
10:30 AM Revision 82fc2a40 (cdm-dataportal): cleaning up java-doc
Andreas Kohlbecker
10:30 AM Revision 61710aca (cdm-dataportal): updating release version in README and fixing typos
Andreas Kohlbecker
10:20 AM task #9576: Add tests for homotypic group name comparator
Andreas Müller wrote:
> Does the unified HomotypicGroupTaxonComparator include the tests then?
There is not need ...
Katja Luther
10:12 AM task #9576: Add tests for homotypic group name comparator
Does the unified HomotypicGroupTaxonComparator include the tests then? Andreas Müller
09:15 AM task #9576 (Rejected): Add tests for homotypic group name comparator
The HOmotypicalGroupNameCOmparator is not used anymore therefore I would remove it and close this ticket because we d... Katja Luther
09:17 AM Revision 26060d0d (cdmlib): ref #9576: delete HomotypicaGroupNameComparator
Katja Luther
08:55 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Andreas Müller wrote:
> Andreas Kohlbecker wrote:
> > diese Liste dürfte vollständig sein https://www.iapt-taxon.or...
Andreas Kohlbecker
08:01 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
looks like the final list is still missing Andreas Müller
08:24 AM bug #9529: Correct formatting for bibliographic in-reference separation
This was mostly done in 5.22 Andreas Müller

05/20/2021

06:09 PM Revision 4b04c212 (cdm-dataportal): Merge branch 'release/5.23.0' into develop
jenkins
06:09 PM Revision 5f5c2f3e (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
06:09 PM Revision 7357c5a9 (cdm-dataportal): updating poms for branch'release/5.23.0' with non-snapshot ve...
jenkins
06:08 PM Revision f7a5c2ea (cdm-dataportal): release-preparation: production level css
jenkins
06:04 PM Revision 4fb8f3fe (cdm-dataportal): updating poms for 5.24.0-SNAPSHOT development
jenkins
06:00 PM Revision e34c07ee (cdm-dataportal): update ducumentation in README completed
Andreas Kohlbecker
06:00 PM Revision 9237c9bb (cdm-dataportal): also preserving the profiles folder
Andreas Kohlbecker
06:00 PM Revision 49f7cc43 (cdm-dataportal): fixing little probelms in README
Andreas Kohlbecker
05:54 PM Revision 8ebc313f (cdm-dataportal): release-preparation: production level css
jenkins
05:52 PM Revision 9f4bb2ee (cdm-dataportal): release-preparation: production level css
jenkins
05:49 PM Revision b752bc04 (cdm-server): Merge branch 'release/5.23.0' into develop
jenkins
05:49 PM Revision 82603df9 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
05:49 PM Revision 97435cda (cdm-server): updating poms for branch'release/5.23.0' with non-snapshot versions
jenkins
05:13 PM Revision 64adf69d (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
05:13 PM Revision 7d8aa7ff (cdm-webapp): Merge branch 'release/5.23.0' into develop
jenkins
05:12 PM Revision 7fb6814f (cdm-webapp): updating poms for branch'release/5.23.0' with non-snapshot versions
jenkins
05:12 PM Revision f7bb7908 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.23.0
jenkins
05:11 PM Revision f95fb91d (cdm-vaadin): Merge branch 'release/5.23.0' into develop
jenkins
05:11 PM Revision 19e34159 (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
05:09 PM Revision 2c2494af (taxeditor): Merge branch 'release/5.23.0' into develop
jenkins
05:09 PM Revision 2445fd8d (taxeditor): Merge branch 'release/5.23.0'
jenkins
05:07 PM Revision 65fed6f7 (cdm-vaadin): updating poms for branch'release/5.23.0' with non-snapshot versions
jenkins
05:07 PM Revision a130cbb8 (cdm-vaadin): jenkins bumping cdmlib.version to 5.23.0
jenkins
05:07 PM Revision 1e450eef (cdmlib): Updating develop poms back to pre merge state
jenkins
05:07 PM Revision ba73614b (cdmlib): Merge branch 'master' into develop
jenkins
05:07 PM Revision 73e9f096 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
05:07 PM Revision 0637e4b1 (cdmlib): Merge branch 'release/5.23.0'
jenkins
05:05 PM task #8081 (Closed): Complete removal of redmine communication hub instances
removed all remains from
* edit-int
* edit-test
* edit-staging
* edit-com
Andreas Kohlbecker
04:50 PM Revision fb75fb5a (cdm-dataportal): fixing little probelms in README
Andreas Kohlbecker
04:48 PM Revision 4e871f29 (cdmlib): updating poms for branch'release/5.23.0' with non-snapshot versions
jenkins
04:43 PM Revision 7d081105 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.23.0-S...
jenkins
04:43 PM Revision dabb33f2 (cdm-webapp): updating poms for 5.24.0-SNAPSHOT development
jenkins
04:43 PM Revision 3ad9cd63 (cdm-webapp): updating poms for 5.23.0 branch with snapshot versions
jenkins
04:43 PM Revision 6a0e0d04 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.24.0-S...
jenkins
04:41 PM Revision 119ce179 (cdm-vaadin): jenkins bumping cdmlib.version to 5.23.0-SNAPSHOT
jenkins
04:41 PM Revision 5b8b67c7 (cdm-vaadin): updating poms for 5.24.0-SNAPSHOT development
jenkins
04:41 PM Revision 0c43eb5d (cdm-vaadin): updating poms for 5.23.0 branch with snapshot versions
jenkins
04:41 PM Revision d610e81a (cdm-vaadin): jenkins bumping cdmlib.version to 5.24.0-SNAPSHOT
jenkins
04:39 PM Revision c3dc5ecc (cdm-vaadin): jenkins bumping cdmlib.version to 5.24.0-SNAPSHOT
jenkins
04:27 PM Revision 187ac0a5 (cdm-vaadin): jenkins bumping cdmlib.version to 5.23.0-SNAPSHOT
jenkins
04:27 PM Revision a5f30f1e (cdm-vaadin): updating poms for 5.24.0-SNAPSHOT development
jenkins
04:27 PM Revision 175f280a (cdm-vaadin): updating poms for 5.23.0 branch with snapshot versions
jenkins
04:26 PM Revision 2422d4a6 (cdm-vaadin): jenkins bumping cdmlib.version to 5.24.0-SNAPSHOT
jenkins
04:25 PM Revision 9bbaa6e5 (taxeditor): Updated version in pom / project files to taxeditor version : 5.24...
jenkins
04:25 PM Revision 035e7f49 (taxeditor): Updated version in pom / project files to taxeditor version : 5.23...
jenkins
04:18 PM Revision a7b308fd (cdm-dataportal): update ducumentation in README completed
Andreas Kohlbecker
04:18 PM Revision f3e7520d (cdm-dataportal): also preserving the profiles folder
Andreas Kohlbecker
03:24 PM Revision f16d2d87 (taxeditor): Updated version in pom / project files to taxeditor version : 5.23...
jenkins
03:23 PM Revision 0f58ba12 (cdm-vaadin): updating poms for 5.23.0 branch with snapshot versions
jenkins
03:23 PM Revision 1d619904 (cdm-vaadin): updating poms for 5.24.0-SNAPSHOT development
jenkins
03:23 PM Revision 73fddc8c (cdm-vaadin): jenkins bumping cdmlib.version to 5.24.0-SNAPSHOT
jenkins
03:23 PM Revision ae7f8450 (cdm-dataportal): updating poms for 5.24.0-SNAPSHOT development
jenkins
03:23 PM Revision 10275ddb (cdm-server): updating poms for 5.24.0-SNAPSHOT development
jenkins
03:20 PM Revision 97b9f1f3 (cdmlib): updating poms for 5.24.0-SNAPSHOT development
jenkins
03:20 PM Revision c2938224 (cdmlib): updating poms for 5.23.0 branch with snapshot versions
jenkins
03:18 PM Revision 3a6a121a (cdm-dataportal): restoring drupal version
Andreas Kohlbecker
03:17 PM Revision 0dfee367 (cdm-dataportal): update instructions continued
Andreas Kohlbecker
03:09 PM feature request #5573 (Closed): Cache Strategy for Media Specimen required
tested the workaround on nightly and it worked as expected. Katja Luther
03:04 PM feature request #5573: Cache Strategy for Media Specimen required
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > The failing test is fixed now (titleCa...
Katja Luther
12:07 PM feature request #5573: Cache Strategy for Media Specimen required
Katja Luther wrote:
> Andreas Müller wrote:
> > The failing test is fixed now (titleCache is set to null and a prop...
Andreas Müller
11:35 AM feature request #5573: Cache Strategy for Media Specimen required
Andreas Müller wrote:
> The failing test is fixed now (titleCache is set to null and a property change event is thro...
Katja Luther
03:04 PM feature request #9326 (Closed): Show all authors in bibliographic references
I guess this can be closed as it is about team formatting and full stop separation which both is fixed.
Open issues ...
Andreas Müller
10:08 AM feature request #9326 (Feedback): Show all authors in bibliographic references
Wolf-Henning Kusber wrote:
> Habe die Beispiele angeschaut, Uptdate der Caches war notwendig.
> Fast alles ist jetz...
Andreas Müller
08:54 AM feature request #9326: Show all authors in bibliographic references
https://test.e-taxonomy.eu/dataportal/preview/phycobank/cdm_dataportal/reference/843e5544-2081-4547-98aa-418db8fb1f85 Andreas Müller
02:37 PM Revision 784f80e6 (cdmlib): ref #5573: reset titleCache for setMedia in mediaSpecimen
Katja Luther
01:19 PM Revision 738b5b05 (taxeditor): cleanup
Andreas Müller
01:17 PM Revision 7357605f (taxeditor): ref #5573: setMedia for media changes in MediaSpecimenDetailElement
Katja Luther
12:49 PM Revision cd37bc26 (cdmlib): ref #9326, ref #3764 fix secion in book-section handling and some cl...
Andreas Müller
12:48 PM Revision 1c5d9ea6 (cdmlib): cleanup
Andreas Müller
12:30 PM Revision 61157129 (cdmlib): ref #9326, ref #3764 fix secion in book-section handling and some cl...
Andreas Müller
12:05 PM Revision 2edaaec5 (cdm-dataportal): pinning drupal version to 7.62 for testing
Andreas Kohlbecker
11:13 AM Revision 9a339764 (cdm-dataportal): fixing composer version number of drupal/zen
Andreas Kohlbecker
11:13 AM Revision e4a638b8 (cdm-dataportal): update instructions continued
Andreas Kohlbecker
10:53 AM Revision aae4944c (cdm-dataportal): fixing composer version number of drupal/zen
Andreas Kohlbecker
10:50 AM Revision 490421a2 (cdm-dataportal): update instructions continued
Andreas Kohlbecker
09:58 AM Revision 4605409b (cdmlib): ref #9326 fix missing article title for section in title (cont.)
Andreas Müller
09:46 AM Revision 83aa4bc1 (cdmlib): ref #9326, ref #3764 fix missing article title for section in title ...
Andreas Müller
09:44 AM Revision 45aa81d7 (cdmlib): ref #9326, ref #3764 fix missing article title for section in title ...
Andreas Müller

05/19/2021

05:38 PM feature request #5573: Cache Strategy for Media Specimen required
The failing test is fixed now (titleCache is set to null and a property change event is thrown). However, as the even... Andreas Müller
05:12 PM Revision ac9d4d38 (cdm-dataportal): README: first update instructions
Andreas Kohlbecker
05:10 PM Revision 01d32cbd (cdmlib): ref #9632, ref #5573 fix titleCache update in Media with workaround (...
Andreas Müller
04:50 PM bug #9629: Better handling of OptionalDataException
The general problem was reported in #9358 already. Andreas Müller
12:52 PM bug #9629: Better handling of OptionalDataException
I guess this is fast to implement as we only need to search for "java.io.OptionalDataException" in the stacktrace.
A...
Andreas Müller
12:31 PM bug #9629 (Closed): Better handling of OptionalDataException
This exception should be handled and the user should be informed to restart the editor.
~~~ text
last remote meth...
Katja Luther
04:48 PM feature request #9326: Show all authors in bibliographic references
Habe die Beispiele angeschaut, Uptdate der Caches war notwendig.
Fast alles ist jetzt gut umgesetzt. 19.05.2021
E...
Wolf-Henning Kusber
04:29 PM Revision a8990cda (taxeditor): fix compile errors for putDescription
Andreas Müller
03:29 PM Revision 10ab27cc (cdmlib): ref #9632, ref #5573 fix titleCache update in Media with workaround (...
Andreas Müller
03:26 PM Revision 64fa0c3c (cdmlib): cleanup
Andreas Müller
03:25 PM Revision 0f6b5dda (cdmlib): ref #6359, ref #9627 fix tests for setSecundumForSubtree workaround
Andreas Müller
03:12 PM bug #9633 (New): startup option to create an initial classfication
To be implemented into `FirstDataInserter`
in case `createInitialClassification` is `true` and there is no classif...
Andreas Kohlbecker
03:04 PM bug #9632 (New): Handle putXXX and remove with aspectj where necessary
See e.g. TODO in Media.putTitle() Andreas Müller
02:54 PM Revision ac5db269 (cdmlib): ref #9627 workaround for update result including taxonBase in setSecu...
Andreas Müller
02:53 PM Revision 0e227b90 (cdmlib): ref #6427 add in doc
Andreas Müller
02:14 PM task #9607 (Closed): read image metadata from MediaInfoService if available
Andreas Kohlbecker
01:27 PM feature request #8471 (Closed): Computed descriptions should be disabled in TaxEditor
New tickets created. Katja Luther
01:06 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
This ticket can be closed once the new 2 tickets are created. Andreas Müller
01:06 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
>Another issue is that sections can be opened now. E.g. if there is an annotation I can't see it's content as I can't... Andreas Müller
12:59 PM feature request #8471 (Feedback): Computed descriptions should be disabled in TaxEditor
The UUID and ID fields can not be copied anymore. In general it might be a good idea not to fully disable fields but ... Andreas Müller
01:26 PM bug #9631 (New): New implementation for disable details/supplemental data views
from #8471:
The UUID and ID fields can not be copied anymore. In general it might be a good idea not to fully disa...
Katja Luther
01:24 PM bug #9630 (Closed): Make the handling of computed description configurable
from #8471:
This ticket is not meant to completely make the computed descriptions invisible. By default they shoul...
Katja Luther
01:12 PM bug #9587 (Closed): Unsaved changes are lost when trying to open a taxon a second time
Katja Luther wrote:
> Andreas Müller wrote:
> > This does not seem to work if a taxon is used multiple times. E.g. ...
Andreas Müller
12:47 PM Revision cb89a368 (cdmlib): ref #9607 using parallel stream to collect metadata for IIIF manifest
Andreas Kohlbecker
12:25 PM feature request #9622: Improve remoting progress monitor handling
Andreas Müller wrote:
> >bei der Aggregation scheint es noch nicht richtig implementiert zu sein, im Progress View z...
Katja Luther
11:50 AM Revision 155b3863 (cdmlib): ref #5573: adapt test
Katja Luther
11:24 AM bug #6427: Improve Matching for Reference.title and abbrevTitle
This is not so urgent anymore since we have the MatchStrategyFactory and especially the ParsedXxxMatchers. However, f... Andreas Müller
10:58 AM feature request #8789: How can we semantically handle characters like "partial inflorescence arra...
Is this still an open issue? Is it urgent? Andreas Müller
10:57 AM task #6284 (Closed): media.bgbm.org available via https
Meanwhile, the media servers functionality has moved to https://image.bgbm.org/ and https://pictures.bgbm.org/
Both ...
Andreas Kohlbecker
10:52 AM task #6284 (Feedback): media.bgbm.org available via https
Is this still an open issue? I think we do not receive media from https://media.bgbm.org/erez/ anymore but I may be w... Andreas Müller
10:55 AM feature request #6929 (Feedback): handling of misapplied names without accepted name
Is this still an open issue. The ticket is 3 years old and I guess it is fixed but I am not sure if I understand the ... Andreas Müller
10:33 AM bug #6359 (Closed): Remaining issues secundum for subtrees
Also created a new ticket for better update result handling: #9628
So we can close this ticket now.
Andreas Müller
10:27 AM bug #6359: Remaining issues secundum for subtrees
Created a follow-up ticket #9627 for correct update result handling on editor side Andreas Müller
10:31 AM task #9628 (New): Improve update result handling for monitored operations
Currently it is handled in AbstractUtility.createUpdateResultReport() since #6359.
Probably we should try to unify...
Andreas Müller
10:29 AM Revision e82d1be9 (taxeditor): cleanup
Andreas Müller
10:19 AM bug #9627 (New): Handle updated objects correctly in monitored operations in taxeditor
Currently in AbstractUtility.executeMoniteredOperation()
~~~
Set<Taxon> taxaToUpdate = getTaxaToUpdate(firstRemot...
Andreas Müller
10:19 AM Revision aa6e8f47 (cdm-dataportal): adapting tests to new refenence cache strategy
Andreas Kohlbecker
10:07 AM Revision 0f89d975 (taxeditor): cleanup
Andreas Müller
08:45 AM feature request #9611 (Closed): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > Can we have more space between Pro Parte...
Katja Luther
08:42 AM Revision b2beda87 (taxeditor): ref #9611: more space between the specific and the general flags
Katja Luther
08:09 AM Revision 1aabfe1b (cdmlib): fix count for cache updater progress monitor
Katja Luther

05/18/2021

12:52 AM feature request #9622: Improve remoting progress monitor handling
>bei der Aggregation scheint es noch nicht richtig implementiert zu sein, im Progress View zeigt er "No subtask name"... Andreas Müller
12:45 AM Revision 809fcc17 (cdmlib): ref #9622, ref #6359, #8871 adapt progress monitoring for description...
Andreas Müller
12:37 AM Revision f30091c2 (cdmlib): cleanup
Andreas Müller
11:01 PM Revision 860f741a (cdmlib): fix potential NPE
Andreas Müller
10:28 PM Revision 6f82f20d (cdmlib): ref #9607 customized dozer mapping and more tests
Andreas Kohlbecker
10:28 PM Revision c3227e69 (cdmlib): ref #9607 adding more default media metadata fields
Andreas Kohlbecker
10:28 PM Revision d0b31346 (cdmlib): ref #9607 processing of metadata with custom structure & test
Andreas Kohlbecker
06:09 PM feature request #9611 (Feedback): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> Can we have more space between Pro Parte and Overwrite existing ... t...
Andreas Müller
06:00 PM feature request #9433 (Closed): Improve titleCache generation for misapplications
Andreas Müller
05:51 PM feature request #9433 (Resolved): Improve titleCache generation for misapplications
Applied in changeset commit:cdmlib|64223995926d2072cd149e408ec437c64c8c7603. Andreas Müller
05:50 PM Revision 64223995 (cdmlib): fix #9433 moved authorship to the non part at end, nom. status is not...
Andreas Müller
03:47 PM Revision a21ab50f (cdmlib): ref #1924 put year after author in bibliographic references and separ...
Andreas Müller
03:22 PM bug #1924: CIHORIEARE in-references in Footnotes
The "publisher" issue (from attachement) was moved to new ticket #9626.
Only open issue: verbatim year
Andreas Müller
03:19 PM feature request #9626 (New): Implement publisher information for bibliographic reference formatting
copied from #1924
see attachement there for examples.
E.g.
~~~
Kilian N. & Raab-Straube E. von 2008: Neue F...
Andreas Müller
03:12 PM Revision 9d4f868a (cdmlib): ref #1924 put year after author in bibliographic references and separ...
Andreas Müller
01:24 PM Revision 570e1cf4 (taxeditor): ref #8471: always disable type field
Katja Luther
01:20 PM bug #6359: Remaining issues secundum for subtrees
So the progress monitor handling is fixed, we can close this ticket. A new ticket for user friendly result report and... Katja Luther
12:15 PM feature request #8471 (Resolved): Computed descriptions should be disabled in TaxEditor
Andreas Müller wrote:
> The description itself is not yet disabled in details view (but it is in suppl data view). T...
Katja Luther
12:02 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
Andreas Müller wrote:
> The "Types" field for ordinary descriptions is now enabled but shouldn't because it is read ...
Katja Luther
10:09 AM feature request #8471: Computed descriptions should be disabled in TaxEditor
Andreas Müller wrote:
> I think we should reenable the "delete" menu item as it should always be possible to remove ...
Katja Luther
09:04 AM feature request #8471: Computed descriptions should be disabled in TaxEditor
Andreas Müller wrote:
> The description itself is not yet disabled in details view (but it is in suppl data view). T...
Katja Luther
12:14 PM Revision 4cf3f92d (taxeditor): ref #8471: disable toggle button in details view
Katja Luther
12:01 PM Revision e297472a (taxeditor): ref #8471: set details view disabled for computed descriptions and...
Katja Luther
11:52 AM feature request #5573: Cache Strategy for Media Specimen required
Andreas Müller wrote:
> Katja Luther wrote:
> > Shouldn't the motif be part of the titlecache if no other field is ...
Katja Luther
09:48 AM Revision c6df1ae1 (taxeditor): ref #8471: allow delete again and disable description parts
Katja Luther
08:57 AM Revision f7f59ba5 (cdm-dataportal): adapting tests to new refenence cache strategy
Andreas Kohlbecker

05/17/2021

12:10 AM task #9607 (Resolved): read image metadata from MediaInfoService if available
Andreas Kohlbecker
12:06 AM Revision e5f4183f (taxeditor): ref #9607 adapting to renamend class -> MediaInfoFileReader
Andreas Kohlbecker
12:06 AM Revision 37788f69 (cdmlib): ref #9607 adding media-info-model as dependency
Andreas Kohlbecker
12:06 AM Revision b9c66ce9 (cdmlib): ignoring src/main/resources/dbscripts
Andreas Kohlbecker
12:06 AM Revision 6c5265eb (cdmlib): ref #9607 renaming class to MediaInfoFileReader
Andreas Kohlbecker
12:06 AM Revision c17dc959 (cdmlib): improved error reporting
Andreas Kohlbecker
12:06 AM Revision 7c55e607 (cdmlib): ref #9607 completing MediaInfoServiceReader
Andreas Kohlbecker
12:06 AM Revision 17d14285 (cdmlib): ref #9607 more tests
Andreas Kohlbecker
07:15 PM Revision 0c85f8e9 (cdmlib): ref #1924 use colon as after author and year operator
Andreas Müller
06:05 PM bug #8521 (Duplicate): User details view: Change password button accessible for ROLE_USER_MANAGER
this is handled with #8925 Katja Luther
06:04 PM Revision 79ec1575 (cdmlib): cleanup
Andreas Müller
06:04 PM Revision e9129942 (cdmlib): ref #9624 use short citation without brackets in cdmlight reference ...
Andreas Müller
06:04 PM Revision 036a4353 (cdmlib): ref #9624, ref #7305, ref #9326 change max number of nomencl. authors...
Andreas Müller
06:03 PM Revision 05bfd934 (taxeditor): add user_manager to core expression of admin menu
Katja Luther
05:27 PM Revision 589e12fd (cdmlib): adapt cache updater for new progress monitor handling - adapt updateC...
Katja Luther
05:21 PM Revision 8cf3e01e (cdmlib): adapt cache updater for new progress monitor handling - continue
Katja Luther
05:17 PM Revision dcce51e5 (cdmlib): adapt cache updater for new progress monitor handling - continue
Katja Luther
05:14 PM Revision 0f88765e (cdmlib): adapt cache updater for new progress monitor handling - continue
Katja Luther
05:14 PM Revision 1edd8f23 (cdmlib): adapt cache updater for new progress monitor handling
Katja Luther
04:46 PM Revision e74ca981 (cdmlib): minor
Andreas Müller
04:45 PM Revision ff02c87a (cdmlib): minor
Andreas Müller
04:44 PM Revision e806a768 (cdmlib): ref #9624 use short citation without brackets in cdmlight reference ...
Andreas Müller
04:09 PM Revision 1b643550 (taxeditor): ref #9622 , ref #6359 handle progress monitor without setting task...
Andreas Müller
03:29 PM bug #6359: Remaining issues secundum for subtrees
Katja Luther wrote:
> I tried to adapt the progress monitor handling like for the cache update and the output in edi...
Andreas Müller
03:26 PM bug #6359: Remaining issues secundum for subtrees
I tried to adapt the progress monitor handling like for the cache update and the output in editor looks like this:
...
Katja Luther
03:00 PM bug #6359: Remaining issues secundum for subtrees

I think the usage of submonitors needs to be adapted, I already did this for cache update, there the submonitor lab...
Katja Luther
03:27 PM Revision 0ea7bbfa (taxeditor): ref #9622 some error handling in progress monitoring
Andreas Müller
02:29 PM Revision 3231a5c3 (cdmlib): ref #9624 use default short citation for TaxonRelationshipFormatter (...
Andreas Müller
02:27 PM task #9624: Centralize team formatting and fix et al. position handling
AM: ... wird bei den err. sec. (und auch syn. sec. von pp-Synonymen) das „Kurzzitat“ noch mit >2 Autoren angezeigt. A... Andreas Müller
01:37 PM bug #9590 (Closed): ObjectDeletedException when swap synonym and accepted taxon
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Also there is a looot of commented cod...
Katja Luther
01:35 PM Revision ab72e607 (cdmlib): ref #9590: remove unused variable
Katja Luther
01:35 PM bug #2969 (Closed): Correct formatting for bibliographic references
The cache strategies are split now (e.g. #9604). Examples for correct formatting bibliographic references are given i... Andreas Müller
01:24 PM feature request #9611 (Resolved): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Katja Luther wrote:
> > > > Andreas M...
Katja Luther
12:47 PM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > implement...
Andreas Müller
12:23 PM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > implemented. Please adapt UI.
> >
>...
Katja Luther
01:23 PM Revision 17cca815 (taxeditor): ref #9587: adapt editor handling for shared taxa - continue
Katja Luther
12:42 PM bug #9587 (Resolved): Unsaved changes are lost when trying to open a taxon a second time
Katja Luther
12:39 PM bug #9587: Unsaved changes are lost when trying to open a taxon a second time
Andreas Müller wrote:
> This does not seem to work if a taxon is used multiple times. E.g. if you search for "Sectes...
Katja Luther
12:40 PM Revision 60fa760b (taxeditor): ref #9587: adapt editor handling for shared taxa
Katja Luther
12:31 PM Revision 8e5f7864 (taxeditor): ref #9611: move use shared taxa to the general flags
Katja Luther
11:06 AM bug #9588: Specimen Tree View: Duplicate derivatives
Andreas Kohlbecker wrote:
> I don't understand why you are changing the category, this clearly was a bug in cdmlib-s...
Andreas Müller
10:54 AM bug #9588: Specimen Tree View: Duplicate derivatives
I don't understand why you are changing the category, this clearly was a bug in cdmlib-services Andreas Kohlbecker
11:00 AM task #9623 (Closed): Remove TaxonBaseShortSecCacheStrategy
ok Katja Luther
10:58 AM feature request #7305 (Closed): [Dicuss] searching for authorteam with more than three members is...
works as expected. Katja Luther
09:45 AM Revision b53660e6 (cdmlib): add appended phrase to scientific name, taxon and synonym tables
Katja Luther
09:31 AM bug #9625 (Closed): Selection for team members does not filter on persons only
Andreas Müller
09:31 AM bug #9625 (Closed): Selection for team members does not filter on persons only
Andreas Müller
09:22 AM bug #9529 (Closed): Correct formatting for bibliographic in-reference separation
WGB: ich bin auf jeden Fall für das Komma!
NoK: Bin ... Walters Meinung
Andreas Müller
09:06 AM Revision 85526f34 (cdmlib): fix getUuidAndTitleCache for persons/teams only
Katja Luther

05/16/2021

11:53 PM feature request #2854 (Closed): Implement part of other title for part of articles and part of bo...
The possible open issue is not relevant anymore as BM imports are mostly done. Also the issue is logged in case it is... Andreas Müller
11:44 PM bug #9373 (Feedback): In specimen details view used within specimen tree editor titleCache field ...
Andreas Müller

05/15/2021

02:35 AM feature request #9433 (Feedback): Improve titleCache generation for misapplications
> Wenn wir das auf sensu ändern wäre es auch schön, wenn man an dieser Stelle auch Autor und nom. Status weglassen wü... Andreas Müller
02:27 AM feature request #3667 (Closed): Implement correct implementation of original spelling in publicat...
Andreas Müller wrote:
> Still need to check/discuss if this is already the case in dataportal and print publication
...
Andreas Müller
02:25 AM feature request #3667: Implement correct implementation of original spelling in publications
Still need to check/discuss if this is already the case in dataportal and print publication Andreas Müller
02:19 AM bug #6960 (Duplicate): Improve reference cachestrategy
This duplicates #4338 Andreas Müller
02:18 AM bug #6960: Improve reference cachestrategy
> webpage without title duplicates the URI
can't reproduce this anymore, seems to be fixed in the meanwhile
Andreas Müller
02:05 AM feature request #3764: Improve formatting for reference type Section
Final tests should be written. See also #6499. ~~Then move back to 3.8 if no major changes needed.~~ There were a cou... Andreas Müller
02:00 AM bug #3872 (Worksforme): Title cache is null if the reference is a journal
I can't reproduce this anymore. Maybe it was fixed with the ReferenceDefaultCacheStrategy refactoring. Andreas Müller

05/14/2021

01:49 AM bug #4773 (Worksforme): Lampranthus throws IndexOutOfRange exception
The exception is not thrown anymore for such a combination and for the concrete taxon in caryo. Also the result looks... Andreas Müller
01:35 AM bug #1815 (Closed): setInReference needs to reset the title cache
This seems to be fixed. See also tests in ReferenceDefaultCacheStrategy Andreas Müller
01:34 AM Revision 461c07a9 (cdmlib): ref #1815 final tests on reset titleCache
Andreas Müller
01:27 AM task #1404 (Rejected): References cache strategy should always render bibliographic references
This is not relevant anymore. Current implementation works for users. Also there are 2 caches now for abbrev and full... Andreas Müller
12:31 AM Revision 275b7d80 (cdmlib): ref #9624 fix EMPTY_TEAM issue for non-titleCache formatting of teams
Andreas Müller
12:02 AM Revision b5a187e2 (cdmlib): ref #9530, ref #6499 add pages for book sections (cont. II)
Andreas Müller
11:58 PM Revision a67ed1e2 (cdmlib): reenable some test
Andreas Müller
11:58 PM Revision 00c59288 (cdmlib): ref #9530, ref #6499 add pages for book sections (cont.)
Andreas Müller
11:43 PM feature request #9530 (Closed): Add pages to bibliographic book sections
Andreas Müller
11:41 PM feature request #9530 (Resolved): Add pages to bibliographic book sections
Applied in changeset commit:cdmlib|957a9a67a088b3e9f30bf2ac712aeb107d36b6d6. Andreas Müller
11:41 PM Revision 957a9a67 (cdmlib): fix #9530, ref #6499 add pages for book sections
Andreas Müller
11:39 PM Revision 78fa4dec (cdmlib): ref #9529 replace afterSectionAuthor n-dash by comma
Andreas Müller
11:36 PM Revision 46062501 (cdmlib): ref #9604 adapt javadoc for ReferenceDefaultCacheStrategy
Andreas Müller
10:58 PM bug #9529: Correct formatting for bibliographic in-reference separation
und noch eine Frage zur Formatierung. In #9529 haben wir ja beschlossen, dass bibliographische In-Referenzen mit „. –... Andreas Müller
10:38 PM Revision 59fa7b84 (cdmlib): ref #9529 fix duplicated dashes and replaces minus by dashes in book ...
Andreas Müller
10:35 PM bug #5684 (Worksforme): NPE when trying to move a presence-absence term within the vocabulary
This works for me and can be closed. Andreas Müller
10:25 PM feature request #9326 (Resolved): Show all authors in bibliographic references
This should be fixed now. Maybe before review an (title)cache update is necessary. For single teams this can be done ... Andreas Müller
09:41 PM Revision cda77ee0 (cdmlib): revert deduplication for term DTOs (cont.)
Andreas Müller
09:33 PM bug #6749 (Closed): No media is created for new mediaSpecimen
This works as expected Andreas Müller
09:14 PM task #9624 (Resolved): Centralize team formatting and fix et al. position handling
This is generally fixed. Fine tuning is still required for correct et al. positions. Email was sent to users. Andreas Müller
07:43 PM task #9624 (Closed): Centralize team formatting and fix et al. position handling
Formatting of teams is done at many places in cdmlib (TeamDefaultCacheStrategy, NomenclaturalSourceFormatting, TaxonB... Andreas Müller
08:18 PM Revision 3edeea19 (taxeditor): cleanup
Andreas Müller
08:16 PM Revision e6f1e6f4 (taxeditor): remove colon after SetxxxForSubtree task names
Andreas Müller
08:15 PM Revision a80e388e (taxeditor): adapt ConceptContainerE4 to TaxonRelationshipFormatter factory method
Andreas Müller
08:07 PM feature request #7305 (Resolved): [Dicuss] searching for authorteam with more than three members ...
This should be fixed with #9624. Before reviewing you may need to run the cache updater. Andreas Müller
08:00 PM feature request #6662 (Closed): Adapt person formatting, set initials behind lastname
Andreas Müller
07:57 PM feature request #6504 (Closed): Bibliographic references should not start with firstname.
This should be fixed due to new cache strategy which puts initials after family name in biblo teams Andreas Müller
07:54 PM Revision 0c763d5f (cdmlib): ref #9624, ref #7305, ref #9326 refactor team formatting all over cdm...
Andreas Müller
04:15 PM feature request #9597 (Closed): Improve formatting of MediaSpecimen in TypeDesignationWorkingSet ...
implementation and test case looks ok. As there are no test to be adapted in the dataportal, this ticket can be closed. Andreas Kohlbecker
01:56 PM Revision f15653d2 (cdmlib): ref #7305, ref #9326 allow different etAlPosition for titleCache and ...
Andreas Müller
01:21 PM task #9623: Remove TaxonBaseShortSecCacheStrategy
I think there is not much to review but just to let you know that I have done this. Andreas Müller
01:18 PM task #9623 (Resolved): Remove TaxonBaseShortSecCacheStrategy
Applied in changeset commit:cdmlib|e80d154bb2d5faf5c1219935eacc16132a22e82c. Andreas Müller
01:13 PM task #9623 (Closed): Remove TaxonBaseShortSecCacheStrategy
The cache strategy is not used anymore and TaxonBaseDefaultCacheStrategy now implements sec referencing the same way ... Andreas Müller
01:17 PM Revision 37cb3cf7 (cdmlib): cleanup
Andreas Müller
01:17 PM Revision b53c4d75 (cdmlib): factory method and singleton support for TaxonRelationshipFormatter
Andreas Müller
01:14 PM Revision e80d154b (cdmlib): fix #9623 remove TaxonBaseShortSecCacheStrategy and CacheUpdaterWithN...
Andreas Müller
12:48 PM feature request #9433 (Resolved): Improve titleCache generation for misapplications
Applied in changeset commit:cdmlib|40708c65957005aa8723235844e7b9c3418f4525. Andreas Müller
12:48 PM Revision 40708c65 (cdmlib): fix #9433 titleCache generation for misapplications only adapted (use...
Andreas Müller
12:24 PM Revision fff53afa (cdmlib): revert deduplication for term DTOs
Andreas Müller
12:19 PM Revision 40b8afc7 (cdmlib): cleanup
Andreas Müller
11:09 AM Revision c4dc8004 (cdmlib): remove doubful ? from protected taxon titleCaches
Andreas Müller
11:08 AM Revision 122a1b31 (cdmlib): cleanup
Andreas Müller
10:44 AM Revision 839fd95f (cdmlib): deduplicate all results in vocabulary dao
Andreas Müller
10:44 AM Revision 0e3fe1f6 (cdmlib): cleanup
Andreas Müller
10:29 AM Revision cdf681f0 (cdmlib): deduplicate all results in term dao
Andreas Müller
10:28 AM Revision 61ebc53c (cdmlib): cleanup
Andreas Müller

05/13/2021

01:14 AM feature request #3666 (Closed): Implement original spelling in name parser
Andreas Müller
12:31 AM feature request #3666 (Resolved): Implement original spelling in name parser
Andreas Müller
12:16 AM Revision a04d9d22 (cdmlib): ref #3666 original spelling deduplication
Andreas Müller
07:48 PM Revision 8c7aea47 (cdmlib): ref #3666 original spelling parser for names without reference
Andreas Müller
07:48 PM Revision 65d376ee (cdmlib): cleanup
Andreas Müller
06:48 PM Revision a3092afb (cdmlib): cleanup
Andreas Müller
06:48 PM Revision 58b3c0f6 (cdmlib): ref #3666 first implementation of original spelling parser (cont.)
Andreas Müller
06:47 PM Revision bb78f32e (cdmlib): ref #3666 first implementation of original spelling parser
Andreas Müller
02:04 PM feature request #9270 (Feedback): show original spelling on taxon page
should we close this as duplicate (for #7781)? Andreas Müller
02:01 PM feature request #9270: show original spelling on taxon page
>Ich erinnere mich jetzt nicht daran warum das nach dem Namen kommt, das war aber sicherlich eine Anfrage/Anforderung... Andreas Müller
01:50 PM bug #7781: original spelling is missing for accepted taxon in taxon page
Also check if orginal name part is in italics as #3667 is now implemented Andreas Müller
01:48 PM Revision 88c7ae13 (cdmlib): ref #3665 test for original spelling for differing species epi and su...
Andreas Müller
01:47 PM Revision 035bc68b (cdmlib): tests not failing without aspectj
Andreas Müller
01:45 PM feature request #3667 (Resolved): Implement correct implementation of original spelling in public...
Applied in changeset commit:cdmlib|9f804efe2c1ddc0baaa3b1491d222e45acd84dd2. Andreas Müller
01:45 PM Revision 9f804efe (cdmlib): fix #3667 implement tagged text for original spellings
Andreas Müller
12:24 PM task #9604 (Closed): Split bibliographic reference cache strategy and nomenclatural formatter + o...
Andreas Müller
12:22 PM feature request #3665 (Closed): Further implementation of original spelling name caching
I think this can be closed. No obvious feature from the ticket description/discussion seems to be missing. Italics fo... Andreas Müller
12:16 PM Revision 65cf40d2 (cdmlib): ref #3667 some more tests for original spelling formatting
Andreas Müller
11:41 AM Revision 1d40411d (cdmlib): ref #9604 split to OriginalSourceFormatter (cont.)
Andreas Müller
11:38 AM feature request #9622 (In Progress): Improve remoting progress monitor handling
Andreas Müller
09:28 AM feature request #9622 (In Progress): Improve remoting progress monitor handling
Open issues:
KL:
bei der Aggregation scheint es noch nicht richtig implementiert zu sein, im Progress View zeig...
Andreas Müller
11:16 AM Revision 440c1195 (cdmlib): ref #9604 split to OriginalSourceFormatter
Andreas Müller
11:14 AM Revision b182d576 (cdmlib): cleanup
Andreas Müller
09:29 AM Revision d1a73b19 (cdmlib): ref #9622 allow releasing progress monitors
Andreas Müller
09:27 AM Revision 2b39b9df (cdmlib): cleanup
Andreas Müller

05/12/2021

01:26 AM Revision c9ccb1e7 (cdmlib): ref #6359 improve progress monitoring for setSecundumForSubtree
Andreas Müller
01:09 AM Revision 6537ad7c (cdmlib): cleanup
Andreas Müller
01:08 AM Revision ea3bd701 (cdmlib): ref #6359 fix NPE when removing sec
Andreas Müller
10:27 PM Revision f35fc088 (taxeditor): cleanup
Andreas Müller
07:22 PM Revision 540b5fba (cdmlib): cleanup
Andreas Müller
07:22 PM Revision e436a9ce (cdmlib): ref #8297 improve out of scope handling for alphabetically ordered co...
Andreas Müller
05:46 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
I think we should reenable the "delete" menu item as it should always be possible to remove computed data again. Mayb... Andreas Müller
05:42 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
The "Types" field for ordinary descriptions is now enabled but shouldn't because it is read only (should be set only ... Andreas Müller
05:39 PM feature request #8471 (Feedback): Computed descriptions should be disabled in TaxEditor
The description itself is not yet disabled in details view (but it is in suppl data view). This needs to be fixed. Andreas Müller
05:38 PM feature request #8471: Computed descriptions should be disabled in TaxEditor
The preferences to make the aggregated data either disabled, invisible or enabled is still missing, correct?
Shoul...
Andreas Müller
08:46 AM feature request #8471 (Resolved): Computed descriptions should be disabled in TaxEditor
Missed to check in the label provider, please review now. There is still a missing issue, the details of the descript... Katja Luther
08:30 AM feature request #8471 (In Progress): Computed descriptions should be disabled in TaxEditor
Katja Luther
08:22 AM feature request #8471 (Resolved): Computed descriptions should be disabled in TaxEditor
please review. Katja Luther
05:15 PM bug #9589 (Closed): Move synonym to another accepted taxon ignores the selected new sec reference
works as expected Andreas Müller
05:13 PM Revision f0a11642 (cdmlib): cleanup
Andreas Müller
05:01 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
Katja Luther wrote:
> Andreas Müller wrote:
> > Also there is a looot of commented code still in the methods. Also ...
Andreas Müller
05:00 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
Katja Luther wrote:
> Andreas Müller wrote:
> > To me it looks like the code commented with "//Move descriptions to...
Andreas Müller
02:52 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
I think this ticket can be closed? Katja Luther
02:51 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
Andreas Müller wrote:
> Also there is a looot of commented code still in the methods. Also some warning.
> Can you ...
Katja Luther
02:31 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
Andreas Müller wrote:
> As the 2 methods are now distinguished only by a boolean parameter we should add a ticket to...
Katja Luther
02:27 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
Andreas Müller wrote:
> To me it looks like the code commented with "//Move descriptions to new taxon" is fully redu...
Katja Luther
05:00 PM Revision 09d803a3 (cdmlib): ref #9590 remove redundant nameUsedInSource handling code
Andreas Müller
04:46 PM Revision d1f6619f (cdmlib): cleanup
Andreas Müller
04:29 PM Revision f5563b1b (cdmlib): cleanup
Andreas Müller
04:25 PM bug #6359: Remaining issues secundum for subtrees
Katja Luther wrote:
> * make cancelable -> maybe we should show how many items already changed, especially because t...
Andreas Müller
04:21 PM bug #6359: Remaining issues secundum for subtrees
Katja Luther wrote:
> review:
>
> * add progress monitor -> the submonitors not shown in the status of the editor...
Andreas Müller
03:56 PM bug #6359 (Feedback): Remaining issues secundum for subtrees
review:
* add progress monitor -> the submonitors not shown in the status of the editor -> maybe a new ticket?
* ...
Katja Luther
03:01 PM bug #6359: Remaining issues secundum for subtrees
Katja, kannst du das Ticket grundsätzlich schon mal reviewen? Wir müssen noch eine Lösung finden für die Auswertung d... Andreas Müller
04:09 PM feature request #9611 (Feedback): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > implemented. Please adapt UI.
>
> The UI is adapted.
Can we h...
Andreas Müller
02:56 PM feature request #9611 (Resolved): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> ... and the preference if this is fast. Otherwise open new ticket as it is not really urgent...
Katja Luther
12:10 PM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> implemented. Please adapt UI.
The UI is adapted.
Katja Luther
10:20 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
... and the preference if this is fast. Otherwise open new ticket as it is not really urgent. Andreas Müller
10:07 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
implemented. Please adapt UI. Andreas Müller
10:03 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> >
> > > A bit problematic ist hte "Overw...
Katja Luther
09:55 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
>
> > A bit problematic ist hte "Overwrite existing sec refs for sele...
Andreas Müller
09:47 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Also I guess by default we should swit...
Katja Luther
09:44 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Also I guess by default we should switch off "apply to MAN err. sec...
Andreas Müller
09:26 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> Also I guess by default we should switch off "apply to MAN err. sec." and "apply to ppsyn sy...
Katja Luther
09:22 AM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Andreas Müller wrote:
> A bit problematic ist hte "Overwrite existing sec refs for selected relations option which...
Katja Luther
04:08 PM Revision 6fe5b1d5 (cdmlib): add comment to random uuid for condensed distribution
Katja Luther
03:16 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Andreas Müller wrote:
> Die Liste enthält leider keine Abkürzungen, um die es aber gerade ging.
Aus einem Chat m...
Andreas Kohlbecker
12:26 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Rein inhaltlich. Mindestens für das Projekt PhycoBank benötigen wir den Link zum Vollzitat. Ich gehe davon aus, das d... Wolf-Henning Kusber
12:23 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Zudem die Frage, wie mit den Langformen umzugehen ist. Bislang hatten wir uns darauf geeinigt, lediglich DOIs oder UR... Andreas Müller
12:19 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Die Liste enthält leider keine Abkürzungen, um die es aber gerade ging. Letztlich kann ich nur raten. War der "Vienna... Andreas Müller
12:11 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Isn't this a good start? We can add more lists on demand. Andreas Kohlbecker
11:40 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Andreas Kohlbecker wrote:
> diese Liste dürfte vollständig sein https://www.iapt-taxon.org/historic/list-of-Codes.ht...
Andreas Müller
11:33 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
diese Liste dürfte vollständig sein https://www.iapt-taxon.org/historic/list-of-Codes.htm
Andreas Kohlbecker
11:27 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Yes, will do two lissts, (i) a short citation, and (ii) correct citations with help of the literature in our library. Wolf-Henning Kusber
11:04 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
here is one kind of list https://www.iapt-taxon.org/historic/index.htm Andreas Kohlbecker
10:48 AM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
Andreas Müller wrote:
> But as I mentioned above I need a full list of all correct abbreviations for all codes. As l...
Andreas Müller
10:27 AM bug #9618 (Closed): fix historic NomenclaturalCodeEdition names ICN -> ICBN
Solution accepted. Ticket can be closed. Andreas Kohlbecker
02:55 PM bug #9621 (New): New Preference for Default of the SecundumForSubtreeConfigurator
see #9611 Katja Luther
02:51 PM feature request #5573: Cache Strategy for Media Specimen required
Katja Luther wrote:
> Shouldn't the motif be part of the titlecache if no other field is filled?
> At the moment th...
Andreas Müller
02:20 PM feature request #5573 (Feedback): Cache Strategy for Media Specimen required
Shouldn't the motif be part of the titlecache if no other field is filled?
At the moment the titleCache is the UUID ...
Katja Luther
02:49 PM Revision 2031fd8d (cdmlib): ref #9590: code cleanup -continue
Katja Luther
02:49 PM Revision 3834bd30 (cdmlib): ref #9590: code cleanup
Katja Luther
02:47 PM Revision 0cc955fe (cdmlib): ref #5573 minor changes to MediaSpecimenDefaultCacheStrategyTest
Andreas Müller
02:30 PM bug #9620 (New): Add a preference which defines whether a new uuid is wanted for swap synoym and ...
from #9590:
As the 2 methods are now distinguished only by a boolean parameter we should add a ticket to define by...
Katja Luther
12:32 PM Revision 86f920de (taxeditor): ref #9611: adapt handler to changes in method signatur
Katja Luther
12:09 PM Revision 5fdf87f0 (taxeditor): ref #9611: adapt taxeditor to changes in configurator
Katja Luther
11:30 AM Revision 10db40b3 (cdmlib): cleanup
Andreas Müller
10:55 AM bug #9390: Remaining issues for set secundum dialog
The line break is probably not so critical so I don't think we urgently need a self made dialogue. But I don't know h... Andreas Müller
10:49 AM Revision 7cbe1369 (cdmlib): ref #9601, ref #9611 by default don't include MAN and ppSyns for setS...
Andreas Müller
10:25 AM bug #9612 (Closed): ROLE_USER_MANAGER is missing as a group in FirstDataImporter
Ja, die sollte weg, dass die hier keinen Sinn macht, meinte ich auch mit "seems like a copy of some other test."
...
Andreas Kohlbecker
10:23 AM bug #9605 (Closed): Disable Details View for structure and property trees in character editor
This works as expected now Andreas Müller
10:17 AM Revision 2771d5a7 (cdmlib): ref #9612 removing unrelated test method and clarifying the remainig ...
Andreas Kohlbecker
10:08 AM bug #9601: Set secundum for subTree does not work for misapplied names
I adapted default value for MAN and ppSyn. For discussion see #9611#note-13 Andreas Müller
09:57 AM bug #9601: Set secundum for subTree does not work for misapplied names
Having 3 parameters for overwriteExistingXXX makes the UI complex and has not much added value. See discussion at #96... Andreas Müller
10:05 AM Revision a6b03e32 (cdmlib): ref #9601, ref #9611 by default don't include MAN and ppSyns for setS...
Andreas Müller
09:57 AM Revision a3247a01 (cdmlib): ref #9601, ref #9611 have only a single overwriteExisting parameter f...
Andreas Müller
09:46 AM Revision e4b84e5f (cdmlib): cleanup
Andreas Müller
08:37 AM Revision d43e5395 (taxeditor): ref #8471: adapt label provider to show icon for computed descript...
Katja Luther

05/11/2021

11:34 PM Revision 84f29819 (taxeditor): ref #9590 use boolean parameter newUuidForAcceptedTaxon instead of...
Andreas Müller
11:31 PM Revision 96d47ae0 (cdmlib): ref #9590 use boolean parameter newUuidForAcceptedTaxon instead of 2 ...
Andreas Müller
11:22 PM Revision 894e913a (cdmlib): cleanup
Andreas Müller
11:21 PM bug #9587 (Feedback): Unsaved changes are lost when trying to open a taxon a second time
This does not seem to work if a taxon is used multiple times. E.g. if you search for "Sectest cdcfd" in rem_conf_am a... Andreas Müller
11:11 PM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Also I guess by default we should switch off "apply to MAN err. sec." and "apply to ppsyn syn. sec." as most projects... Andreas Müller
11:07 PM feature request #9611 (Feedback): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Similar to the setPublishForSubtree dialog we should separate those parameters that do hold for all taxon types a bit... Andreas Müller
10:38 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
As the 2 methods are now distinguished only by a boolean parameter we should add a ticket to define by preferences if... Andreas Müller
10:36 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
To me it looks like the code commented with "//Move descriptions to new taxon" is fully redundant in both methods. If... Andreas Müller
10:33 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
Also there is a looot of commented code still in the methods. Also some warning.
Can you please remove those parts o...
Andreas Müller
10:27 PM bug #9590 (Feedback): ObjectDeletedException when swap synonym and accepted taxon
I do not understand why we need the lines
~~~
acceptedTaxon.setTitleCache(null, true);
acceptedTaxon.g...
Andreas Müller
10:24 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
Instead of having a new methode I added a new parameter (boolean newUuidForAcceptedTaxon) to the method and unified t... Andreas Müller
10:23 PM bug #9590: ObjectDeletedException when swap synonym and accepted taxon
The original problem (re-save) is fixed with d4149686.
Andreas Müller
10:21 PM Revision 37c6014e (cdmlib): ref #9590 use boolean parameter newUuidForAcceptedTaxon instead of 2 ...
Andreas Müller
10:16 PM Revision 8bf7ecd2 (cdmlib): cleanup
Andreas Müller
06:57 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
>What if this information is to be shown the Data Portal, would you just write "Cambridge 1935" without stating which... Andreas Müller
06:03 PM bug #9618 (Resolved): fix historic NomenclaturalCodeEdition names ICN -> ICBN
You mean the "Suggestion" above?
I do not understand why this needs to be a method for NomenclaturalCode.
Why n...
Andreas Müller
04:46 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
The Taxeditor is not the only UI we have. There is the UI where I took the screenshot from, therefore I don't quite u... Andreas Kohlbecker
04:35 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
But I do not understand what we need the abbreviation for. It is really an important information to show the abbrevia... Andreas Müller
04:30 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
I was not in cc of this ticket anymore therefore I missed the discussion. Andreas Müller
03:09 PM bug #9618 (Feedback): fix historic NomenclaturalCodeEdition names ICN -> ICBN
Andreas Müller wrote:
> NomenclaturalCodeEdition entry names are pure enum "names" not used for anything else. So we...
Andreas Kohlbecker
06:45 PM bug #9612: ROLE_USER_MANAGER is missing as a group in FirstDataImporter
But I also do not understand what the testInsertData() test method is for. It does not seem to be related to first da... Andreas Müller
06:42 PM bug #9612 (Resolved): ROLE_USER_MANAGER is missing as a group in FirstDataImporter
The addMissingAuthority method is a private method that is explicitly tested in testBlankDB by the result dataset "Fi... Andreas Müller
05:57 PM bug #9612: ROLE_USER_MANAGER is missing as a group in FirstDataImporter
Andreas Kohlbecker wrote:
> implementation ok, the `FirstDataInserterTest` however looks like it has never been impl...
Andreas Kohlbecker
05:39 PM bug #9612 (In Progress): ROLE_USER_MANAGER is missing as a group in FirstDataImporter
implementation ok, the `FirstDataInserterTest` however looks like it has never been implemented, seems like a copy of... Andreas Kohlbecker
06:43 PM feature request #9613 (Closed): Use fixed uuids for roles project manager, publish and user manager
Andreas Müller
05:57 PM feature request #9613: Use fixed uuids for roles project manager, publish and user manager
can be closed in principle, but see #9612 first. Andreas Kohlbecker
06:26 PM task #9300: Name Page: harmonize media specimen lectotype representations
Andreas Kohlbecker wrote:
> Andreas Müller wrote:
> > so should we change status to "in progress" as questions are ...
Andreas Müller
06:01 PM Revision a306e68c (cdmlib): ref #9618 add NomenclaturalCodeEdition.abbrev (some abbrevs are stil...
Andreas Müller
05:47 PM bug #9185 (Closed): DateHeaderFilter.doFilter(..) causes NPE in FrameworkServlet.processRequest(....
no longer such NPEs in the logs Andreas Kohlbecker
05:40 PM bug #9606 (Closed): NullPointerExceptions (NPEs) in OccurrenceServiceImpl
yes Andreas Kohlbecker
05:30 PM feature request #9619 (Closed): Model changes for taxon concept strategy
Tested on test server. The new columns appear as expected. Andreas Müller
03:29 PM feature request #9619 (Resolved): Model changes for taxon concept strategy
Andreas Müller
05:28 PM task #9536 (Closed): Remove old single source citation and microCitation columns for secundum and...
Tested on test server, works as expected after server ran update script Andreas Müller
05:22 PM feature request #9575 (Closed): Allow flag to include authors in taxon and name search in TaxEditor
works as expected now Andreas Müller
05:19 PM task #9614 (Closed): Use underscore as word separator for all role based groups
looks good Andreas Kohlbecker
05:13 PM feature request #9597 (Resolved): Improve formatting of MediaSpecimen in TypeDesignationWorkingSe...
Andreas Kohlbecker wrote:
> please can you clarify what the expected new output is?
>
> I am assuming this repres...
Andreas Müller
04:24 PM feature request #9597 (Feedback): Improve formatting of MediaSpecimen in TypeDesignationWorkingSe...
please can you clarify what the expected new output is?
I am assuming this representation in the new one ".... Ger...
Andreas Kohlbecker
04:43 PM task #9617: Rename ICNB to ICNP
Andreas Kohlbecker wrote:
> please consider the discussion in #9618 before closing this ticket, as the question ther...
Andreas Müller
03:43 PM task #9617: Rename ICNB to ICNP
please consider the discussion in #9618 before closing this ticket, as the question there is highly related. Andreas Kohlbecker
03:40 PM task #9617 (Closed): Rename ICNB to ICNP
I tink this can be closed. ICNB/P is not yet really used anyway. Andreas Müller
12:33 PM task #9617 (Resolved): Rename ICNB to ICNP
Applied in changeset commit:cdmlib|a918965a9529a628c997456fd5810338a2f7443f. Andreas Müller
04:34 PM bug #9366 (Closed): Specimen type designation with specimen having only collection name but not c...
implementation looks correct, can be closed Andreas Kohlbecker
03:52 PM Revision e4c6e7b3 (cdmlib): ref #9617 javadoc adaptations
Andreas Müller
03:48 PM Revision 084b31e9 (taxeditor): ref #9617 change label for ICNP in taxeditor
Andreas Müller
03:46 PM Revision c3391e45 (taxeditor): cleanup
Andreas Müller
03:39 PM Revision f785c3cc (cdmlib-apps): cleanup
Andreas Müller
03:39 PM Revision d3fb19db (cdmlib-apps): add EuroMedDistributionAggregationActivator
Andreas Müller
03:39 PM Revision 58a29e3b (cdmlib-apps): add CactaceaeIdentifierActivator
Andreas Müller
03:38 PM Revision 7fd0cf17 (cdmlib-apps): ref #9617 rename ICNB to ICNP in cdmlib-app
Andreas Müller
03:32 PM Revision 63fb5a6d (taxeditor): ref #6359 improve reporting for longrunning tasks with UpdateResul...
Andreas Müller
03:06 PM Revision cc21d978 (taxeditor): ref #8471: disable computed descriptions - supplemental data
Katja Luther
03:02 PM Revision 0858c777 (taxeditor): ref #8471: disable computed descriptions
Katja Luther
02:35 PM Revision 90ca7c0d (taxeditor): ref #9536 fix taxeditor test for removed classification.reference_id
Andreas Müller
02:06 PM Revision 98e684f7 (taxeditor): ref #9617 replace ICNB to ICNP in taxeditor (cont.)
Andreas Müller
01:35 PM Revision 6d6ca639 (taxeditor): ref #9617 replace ICNB to ICNP in taxeditor
Andreas Müller
01:35 PM Revision 3d012c19 (taxeditor): update taxeditor test H2 to 5.23
Andreas Müller
01:35 PM Revision 93aade5e (taxeditor): cleanup
Andreas Müller
01:04 PM Revision 72253758 (cdmlib): ref #9613 adapt uuids in tests
Andreas Müller
12:44 PM Revision 9038b634 (cdm-vaadin): update vaadin test H2 to 5.23
Andreas Müller
12:44 PM Revision 182c851e (cdm-vaadin): ref #9617 update vaadin doc
Andreas Müller
12:42 PM Revision bc589ebc (cdmlib): update cached model to 5.23
Andreas Müller
12:36 PM Revision c190b965 (cdmlib): update cdmlib test H2 to 5.23
Andreas Müller
12:35 PM Revision 4488955c (cdmlib): ref #9617 javadoc in rank class
Andreas Müller
12:31 PM Revision a918965a (cdmlib): fix #9617 rename ICNB to ICNP in cdmlib
Andreas Müller
12:16 PM Revision c8e51fc7 (cdmlib): upgrade to v5.23
Andreas Müller
12:16 PM Revision 81c55de3 (cdmlib): ref #9613 change uuid for role project manager as it was used also fo...
Andreas Müller
12:12 PM Revision 2cfe7954 (cdmlib): ref #9539 add clone for availableFor
Andreas Müller
12:05 PM bug #6359 (Resolved): Remaining issues secundum for subtrees
Andreas Müller
12:04 PM Revision 6c880f75 (cdmlib): cleanup
Andreas Müller
12:03 PM Revision 2368acec (cdmlib): ref #9619 add conceptId, conceptDefinitions, conceptStatus, taxonType...
Andreas Müller
10:59 AM bug #9615 (New): Opttions for schema creation in empty data bases.
Thank you for this hint. The cdmlib-remote will create the schema creation when the parameter `cdm.forceSchemaCreate`... Andreas Kohlbecker
10:22 AM feature request #8708 (Duplicate): Sort taxa in distribution editor same as in navigator
this is a duplicate for #9416 and #9354, so I close this ticket as duplicate. Katja Luther
09:31 AM bug #9245: Creating derived units from existing derived unit is not possible in specimen tree editor
Andreas Müller wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > This to me seems to be fixed. Katja ...
Katja Luther
09:03 AM bug #9469 (Closed): Searching for a UUID in bulkeditor which does not belong to a record throws a...
Tested it in TeamOrPerson Bulkeditor and Namebulkeditor and got no exception, seems to be fixed. Katja Luther
08:58 AM bug #9605 (Resolved): Disable Details View for structure and property trees in character editor
Andreas Müller wrote:
> Generally this works. However, there is a special situation which shows a strange behavior:
...
Katja Luther
08:57 AM Revision 59cd7375 (taxeditor): ref #9605: correct handling of selection handling when opening ter...
Katja Luther

05/10/2021

05:17 PM task #9617: Rename ICNB to ICNP
Andreas Kohlbecker wrote:
> NOTE: this change in `NomenclaturalCodeEdition` should not affect the `name` of historic...
Andreas Müller
04:28 PM task #9617: Rename ICNB to ICNP
NOTE: this change in `NomenclaturalCodeEdition` should not affect the `name` of historic code editions which where or... Andreas Kohlbecker
03:11 PM task #9617 (Closed): Rename ICNB to ICNP
Since certain time the code is better called ICNP. See https://en.wikipedia.org/wiki/International_Code_of_Nomenclatu... Andreas Müller
05:16 PM bug #9618: fix historic NomenclaturalCodeEdition names ICN -> ICBN
NomenclaturalCodeEdition entry names are pure enum "names" not used for anything else. So we can rename them but ther... Andreas Müller
04:35 PM bug #9618 (Closed): fix historic NomenclaturalCodeEdition names ICN -> ICBN
As of 2012 the IAPT has renamed the code editions to ICN, older code editions like the Vienna code and former release... Andreas Kohlbecker
05:06 PM feature request #9619 (Closed): Model changes for taxon concept strategy
In the taxonId meeting 2021-03-21 we agreed on the following changes
Class: Taxon
Attribute: conceptId
Type:...
Andreas Müller
10:28 AM Revision 85a5a250 (cdmlib): add byKey method to CondensedDistributionRecipe
Andreas Müller
10:28 AM Revision 89dc9826 (cdmlib): cleanup
Andreas Müller
10:10 AM Revision e5209232 (cdmlib): fix exception in cdmlight
Katja Luther
09:08 AM feature request #9616 (New): Reference for condensed distribution string
mail WB:
Eine (auch jetzt) offene Frage ist, wie man mit Referenzen innerhalb des Strings oder für den gesamten Fa...
Katja Luther
08:56 AM Revision 67c233dc (cdmlib): cdmlight: move condensed distribution string to simple facts table
Katja Luther

05/07/2021

01:35 AM task #9291: Clear all unnecesary TypeDesignation.citation entities and citationDetails
we have discussed this Andreas Müller
01:32 AM feature request #6718 (Duplicate): Constistent TypeDesignation representation creation
Close this ticket as it is only a master (subtickets are tagged by "type designation") Andreas Müller
01:19 AM bug #9588: Specimen Tree View: Duplicate derivatives
The example data look ok, but not fully similar to the reported data structure from production. Therefore I suggest t... Andreas Müller
01:12 AM bug #9609: Use DerivedUnit or FieldUnit for DetailsView of tree editor
Generally this is not so urgent but should be done at some time. Andreas Müller
12:17 PM bug #9609: Use DerivedUnit or FieldUnit for DetailsView of tree editor
as we want to release next week I move this ticket to the next milestone Katja Luther
01:11 AM bug #9615 (Feedback): Opttions for schema creation in empty data bases.
The required functionality exists in the taxeditor:
![](picture914-1.png)
therefore I suggest to close this tic...
Andreas Müller
08:34 PM bug #9615 (New): Opttions for schema creation in empty data bases.
stack trace from cdmlib-remote-webapp startup:
~~~~
Caused by: org.springframework.beans.BeanInstantiationExcept...
Andreas Kohlbecker
04:49 PM Revision 163868e4 (cdmlib): ref #9607 trunk for MediaInfoServiceReader
Andreas Kohlbecker
04:48 PM Revision 388873cb (cdmlib): ref #9607 avoiding NPEs in case of file: URIs
Andreas Kohlbecker
04:46 PM Revision 67bc277e (cdmlib): ref #9607 ref #9203 less error-prone api for MediaUriTransformationPr...
Andreas Kohlbecker
04:28 PM Revision 4472b242 (cdmlib): ref #9607 MediaMetadataReader class hierarchy
Andreas Kohlbecker
03:43 PM Revision 220ce244 (cdmlib): ref #6359 finetuning for updatedObjects in ITaxonNodeDao
Andreas Müller
03:43 PM Revision f7c29eba (cdmlib): add sizeAll to SetMap
Andreas Müller
03:36 PM Revision e43034c0 (cdmlib): fixing orthography
Andreas Kohlbecker
03:36 PM Revision 98034f39 (cdmlib): ref #9607 ref #9203 less error-prone api for MediaUriTransformationPr...
Andreas Kohlbecker
03:36 PM Revision 3d7d94fd (cdmlib): ref #9607 removing obsolete methods
Andreas Kohlbecker
03:36 PM Revision 8c65aedb (cdmlib): ref #9607 fixing typo in class name, legacy method for old code using...
Andreas Kohlbecker
03:36 PM Revision d7840c7b (cdmlib): ref #9607 introducing IMediaInfoFactory interface
Andreas Kohlbecker
03:35 PM Revision 952aa532 (taxeditor): ref #9607 using MediaMetadataFileReader.legacyFactoryMethod in editor
Andreas Kohlbecker
03:34 PM Revision b903149c (taxeditor): ignoring symlinks in dev-linked-projects
Andreas Kohlbecker
03:33 PM Revision ffcfac39 (taxeditor): script for easy locally wiring taxeditor with cdmlib projects - ha...
Andreas Kohlbecker
02:58 PM Revision af7821ec (cdmlib): ref #6359 finetuning for updatedObjects in setSecundumForSubtree (dis...
Andreas Müller
02:13 PM Revision 06fb5f40 (cdmlib): ref #6359 adapt setPublishForSubtree to improved progress monitoring
Andreas Müller
02:12 PM Revision 43461f17 (cdmlib): cleanup
Andreas Müller
01:56 PM bug #6359 (In Progress): Remaining issues secundum for subtrees
Andreas Müller
01:54 PM Revision f752535b (cdmlib): ref #6359 make setPublishForSubtree and setSecundumForSubtree cancelabel
Andreas Müller
01:47 PM task #9614: Use underscore as word separator for all role based groups
This is fixed and can be reviewed (except for the schema update which will is not yet enabled) Andreas Müller
01:46 PM task #9614 (Resolved): Use underscore as word separator for all role based groups
Applied in changeset commit:cdmlib|19400ec9f00bbda8b8539082ffb469999ed03977. Andreas Müller
01:35 PM task #9614 (Closed): Use underscore as word separator for all role based groups
such as Project_Manager, Editor_Reference and Editor_Extended_Create.
Currently they use also camel case and hyphen.
Andreas Müller
01:46 PM Revision 19400ec9 (cdmlib): fix #9614 use underscore in role based group names
Andreas Müller
01:27 PM bug #9051: Role Project manager should not have right to edit users and creating a new user with ...
I changed the title of the ticket as the incorrect evaluation of the rights for role_project_manager is the more crit... Andreas Müller
09:53 AM bug #9051 (New): Role Project manager should not have right to edit users and creating a new user...
Katja Luther wrote:
> How are you able to create a user without permission, the admin menu is available only if you ...
Andreas Müller
08:37 AM bug #9051 (Feedback): Role Project manager should not have right to edit users and creating a new...
How are you able to create a user without permission, the admin menu is available only if you are admin or project ma... Katja Luther
01:24 PM bug #9612: ROLE_USER_MANAGER is missing as a group in FirstDataImporter
This is fixed and can be reviewed. Andreas Müller
12:41 PM bug #9612 (Resolved): ROLE_USER_MANAGER is missing as a group in FirstDataImporter
Applied in changeset commit:cdmlib|ee97649b15bfeb922508e97eec12aaecbd04535e. Andreas Müller
10:13 AM bug #9612 (In Progress): ROLE_USER_MANAGER is missing as a group in FirstDataImporter
Andreas Müller
09:52 AM bug #9612 (Closed): ROLE_USER_MANAGER is missing as a group in FirstDataImporter
... for details see #9051
Or is it not wanted to have a group for this as default similar to Group_Project_Manager?
Andreas Müller
01:24 PM feature request #9613: Use fixed uuids for roles project manager, publish and user manager
this is fixed and can be reviewed. Only open issue is that the schema update to 5.23 is not yet activated so old data... Andreas Müller
01:22 PM feature request #9613 (Resolved): Use fixed uuids for roles project manager, publish and user man...
Applied in changeset commit:cdmlib|961bbcd9b37c84a728d020c601843c769ff1de52. Andreas Müller
12:21 PM feature request #9613 (Closed): Use fixed uuids for roles project manager, publish and user manager
Currently only Role_Admin and Role_Remoting seem to have fixed UUIDs though in class persistence.permission.Role UUID... Andreas Müller
01:22 PM Revision a6a14c41 (cdmlib): minor
Andreas Müller
01:22 PM Revision 961bbcd9 (cdmlib): fix #9613 update script for old role uuids
Andreas Müller
12:40 PM Revision 0c924588 (cdmlib): ref #9613 use fixed role uuids for new GrantedAuthorities being roles...
Andreas Müller
12:36 PM Revision 695765fe (cdmlib): handle uuids explicitly and ref #9612 fix role user manager uuid
Andreas Müller
12:36 PM Revision bb6091a3 (cdmlib): cleanup
Andreas Müller
12:36 PM Revision ee97649b (cdmlib): fix #9612 add user manager as group to firstDataInserter
Andreas Müller
12:36 PM Revision 0deb5ff1 (cdmlib): use saveOrUpdate in firstDataInserted.checkGroup()
Andreas Müller
12:36 PM Revision 3fb46e5c (cdmlib): cleanup
Andreas Müller
12:36 PM Revision 4cc9e6d9 (cdmlib): unignore firstDataInserted test
Andreas Müller
12:16 PM task #9595 (Closed): Use DerivedUnit or DnaSample for DnaSampleGeneralDetailElement
this works as expected. Katja Luther
12:09 PM task #9594 (Closed): Use MediaSpecimen as input for MediaSpecimenGeneralDetailElement
Implemented the interface and reviewed the mediaspecimen details view. This worked as expected, so we can close this ... Katja Luther
11:42 AM feature request #8922 (Duplicate): Make setting of sec-Reference configurable when moving synonyms.
this is a duplicate for #9340. Katja Luther
11:40 AM feature request #9575 (Resolved): Allow flag to include authors in taxon and name search in TaxEd...
this should be fixed now. Katja Luther
11:36 AM Revision 42b9869e (taxeditor): ref #9575: correct handling of author flag for taxon search
Katja Luther
10:17 AM feature request #9611 (Resolved): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
Please review. Katja Luther
10:16 AM bug #9601 (Closed): Set secundum for subTree does not work for misapplied names
tested it with the new implementation in editor and it works as expected. Katja Luther
10:02 AM Revision cfae30ae (taxeditor): ref #9611: implement set secundum for MAN and pro parte syn
Katja Luther
09:44 AM bug #8521 (Feedback): User details view: Change password button accessible for ROLE_USER_MANAGER
This to me seems to be a duplicate for #8925. If this is true, please close the ticket as duplicate and remove target... Andreas Müller
09:39 AM Revision 8939a1ff (taxeditor): ref #9587: clicking on an already open taxon only set the focus
Katja Luther
09:39 AM Revision f9385c07 (taxeditor): fix #8659: refresh navigator after abcd import
Katja Luther
08:59 AM bug #9587 (Resolved): Unsaved changes are lost when trying to open a taxon a second time
Andreas Müller wrote:
> the cancel works now.
>
> However, this is still unclear: "Diese Operation wird den Edito...
Katja Luther
08:56 AM Revision 7406a8d5 (cdmlib): avoid NPE
Katja Luther

05/06/2021

12:47 AM Revision 9336738a (cdmlib): ref #6359 add session.clear()
Andreas Müller
12:37 AM Revision c0abf59d (taxeditor): fix potential NPE in ProgressMonitorClientManager
Andreas Müller
12:37 AM Revision b953bc70 (taxeditor): cleanup
Andreas Müller
12:34 AM Revision b5aafef0 (cdmlib): fix compile error
Andreas Müller
12:27 AM Revision 6d17bcd3 (cdmlib): cleanup
Andreas Müller
11:45 PM Revision ec8277bd (cdmlib): ref #6359 use subprogressmonitor
Andreas Müller
11:44 PM Revision 0bb7d42f (cdmlib): ref #6359 fix update issue
Andreas Müller
11:22 PM Revision e067bb50 (cdmlib): ref #6359 improve partition handling
Andreas Müller
09:51 PM bug #9588: Specimen Tree View: Duplicate derivatives
Test data: http://int.e-taxonomy.eu/dataportal/integration/reference/cdm_dataportal/taxon/d245083e-3bda-435f-9bb3-bdc... Andreas Kohlbecker
07:03 PM bug #9588: Specimen Tree View: Duplicate derivatives
I will do the review after the release as I have no test data on test Andreas Müller
09:00 PM Revision c6ecb751 (cdmlib): cleanup
Andreas Müller
09:00 PM Revision 74e9f695 (cdmlib): ref #9598 fix generics for common deduplicate usage
Andreas Müller
08:59 PM Revision cfa25f63 (cdmlib): ref #6359 improve updated objects behavior
Andreas Müller
08:45 PM feature request #9611: Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
This is a blocker as the current behavior by default sets the error sec and the syn sec which might be unexpected for... Andreas Müller
06:54 PM feature request #9611 (Closed): Implement setSecundumForSubtree for MAN and ppSyns in TaxEditor
this is a follow up from #9601
Parameters are similar to setPublishForSubtree.
The labels should make clear tha...
Andreas Müller
08:32 PM Revision 3cba463f (cdmlib): ref #9598 some parameter renaming and improve updated objects behavior
Andreas Müller
07:51 PM bug #9598 (Closed): Deduplicate NamedAreas with >1 representations and include label in search
I works.
I changed the code the way that it calls the existing method to avoid redundant code.
As this does not...
Andreas Müller
07:47 PM Revision 69d199a5 (cdmlib): cleanup
Andreas Müller
07:47 PM Revision 013cea82 (cdmlib): ref #9598 remove redundant code
Andreas Müller
07:40 PM bug #9587 (Feedback): Unsaved changes are lost when trying to open a taxon a second time
Andreas Müller
07:40 PM bug #9587: Unsaved changes are lost when trying to open a taxon a second time
the cancel works now.
However, this is still unclear: "Diese Operation wird den Editor speichern. Ebenso werden al...
Andreas Müller
07:16 PM bug #9605 (Feedback): Disable Details View for structure and property trees in character editor
Generally this works. However, there is a special situation which shows a strange behavior:
* open character edito...
Andreas Müller
07:11 PM feature request #9575: Allow flag to include authors in taxon and name search in TaxEditor
The problem seems to be flag direction. With the flag NOT set, it works, with the flag set, it does not work. But it ... Andreas Müller
07:06 PM feature request #9575 (Feedback): Allow flag to include authors in taxon and name search in TaxEd...
This does not work correctly yet. I searched for "Arenario Ad*" on rem_conf_am with no result. While search for "Aren... Andreas Müller
07:02 PM bug #9603 (Closed): Sorting in status drop down of distribution editor
Works as expected and also methods that depend on the change were adapted. Andreas Müller
06:55 PM bug #9601: Set secundum for subTree does not work for misapplied names
please review Andreas Müller
06:52 PM bug #9601 (Resolved): Set secundum for subTree does not work for misapplied names
Applied in changeset commit:cdmlib|3b85f95996257c66bec3f57c82deac14356df375. Andreas Müller
06:52 PM Revision 3b85f959 (cdmlib): fix #9601 allow misapplied names and proparte Syns to set secundum fo...
Andreas Müller
06:45 PM Revision b7440493 (cdmlib): remove unnecessary second load
Andreas Müller
06:44 PM Revision b39f1ad2 (cdmlib): cleanup
Andreas Müller
05:38 PM Revision 1aacbc16 (cdmlib): revert unwanted CommonService commit
Andreas Müller
05:20 PM Revision bbb2488d (taxeditor): add service.media to cdmlib exports
Andreas Müller
05:14 PM Revision ca3d3181 (taxeditor): clean up commit 17c6b2e13c7ac
Andreas Müller
04:14 PM Revision 49e5e5a6 (cdmlib): cleanup
Andreas Müller
04:14 PM Revision 3b1da35f (cdmlib): ref #6359, ref #3740 error handling for setPublishForSubtree
Andreas Müller
03:43 PM Revision 48334f5f (taxeditor): ref #9607 adapting to changes in image metadata factories - CdmApp...
Andreas Kohlbecker
03:35 PM bug #8659 (Closed): Taxon navigator: not refreshed after ABCD file import
this is fixed now. Katja Luther
03:34 PM Revision 17c6b2e1 (taxeditor): ref #9607 adapting to changes in image metadata factories
Andreas Kohlbecker
03:23 PM bug #9610 (New): MediaMedadataFileReader (formerly in CdmImageInfo) loads same image file multipl...
For one and the same image file the UriUtils methos `getInputStream()` and `getResourceLength()` are being used multi... Andreas Kohlbecker
03:09 PM Revision 3526156e (cdmlib): ref #9607 moving MediaMetadataService URI transformation to DefaultMe...
Andreas Kohlbecker
02:55 PM task #9607 (In Progress): read image metadata from MediaInfoService if available
Andreas Kohlbecker
02:53 PM Revision 8674bf53 (cdmlib): ref #9607 moving and renaming test class from commons to services
Andreas Kohlbecker
02:53 PM Revision 3f04dd4e (cdmlib): ref #9607 replacing class local factory methods and heplers in CdmIma...
Andreas Kohlbecker
11:15 AM Revision 40113a9f (cdmlib): ref #6359 error handling for setSecundumForSubtree
Andreas Müller
11:04 AM Revision f6dfbc26 (cdmlib): cleanup
Andreas Müller
09:04 AM Revision fbbe5da0 (taxeditor): ref #9609: rename details element classes
Katja Luther
08:59 AM bug #9609 (New): Use DerivedUnit or FieldUnit for DetailsView of tree editor
same reason as for #9594
Implement new details view elements for tree editor and use derived unit and field unit o...
Katja Luther

05/05/2021

06:06 PM bug #9608 (New): UriUtils to use HTTP HEAD requests where possible
where UriUtils need to use HTTP HEAD requests :
* getResourceLength()
* more ?
This can be performance criti...
Andreas Kohlbecker
05:52 PM task #9607 (Closed): read image metadata from MediaInfoService if available
The BGBM digilib image server is now complemented by an instance of the [MediaInfoService](https://github.com/cyberta... Andreas Kohlbecker
05:43 PM Revision 96288777 (cdmlib): handle null values in TaxonNodeByRankAndNameComparator
Andreas Müller
03:15 PM Revision 9201d8aa (taxeditor): cleanup, fix field unit in details views
Katja Luther
01:04 PM Revision e00fef3e (cdm-server): logging of remoting requests with duration per default
Andreas Kohlbecker
11:29 AM task #9594: Use MediaSpecimen as input for MediaSpecimenGeneralDetailElement
Andreas Müller wrote:
> in DetailsViewE4.setInput() there is the following code:
>
> ~~~
> if (input instanceof...
Katja Luther
10:58 AM Revision e21cf4b8 (taxeditor): ref #9603: adapt order of named areas in distribution editor
Katja Luther
10:57 AM bug #9603 (Resolved): Sorting in status drop down of distribution editor
please review. Katja Luther
10:40 AM feature request #6718 (Feedback): Constistent TypeDesignation representation creation
there two additional ticket one in cdmlib and one in cdmlib-remote (https://dev.e-taxonomy.eu/redmine/projects/edit/i... Andreas Kohlbecker
09:54 AM Revision 8cec01d8 (taxeditor): fix #9605: disable details for termtree in character editor
Katja Luther
09:53 AM bug #9605: Disable Details View for structure and property trees in character editor
please review Katja Luther
09:52 AM bug #9605 (Resolved): Disable Details View for structure and property trees in character editor
Applied in changeset commit:taxeditor|8cec01d85742928dc10fb695d2f778f627c8414a. Katja Luther
09:24 AM Revision 99e6c066 (cdmlib): fix StringUtils dependency
Andreas Müller
08:53 AM Revision 10cae443 (cdmlib): remove warnings
Andreas Müller
08:38 AM Revision d27905b0 (cdmlib): cleanup
Katja Luther
08:36 AM Revision 1d2247b4 (cdmlib): cleanup
Katja Luther
 

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