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From 03/21/2021 to 04/19/2021

04/19/2021

11:43 PM feature request #9537 (Feedback): Implement ratioToStructure in TaxEditor
A final issue is that removing the "ratio to" with titleCache not being protected does not set back the titleCache to... Andreas Müller
11:35 PM feature request #9114: Handle malformed URIs in user type
Katja Luther wrote:
> Andreas Müller wrote:
> > In #9111#note-1 AK suggests to also encode fragment and query parts...
Andreas Müller
02:40 PM feature request #9114 (Feedback): Handle malformed URIs in user type
Andreas Müller wrote:
> In #9111#note-1 AK suggests to also encode fragment and query parts. This has **not** been i...
Katja Luther
10:11 PM Revision a35dc362 (cdmlib): ref #6542 add warnAndDoNotOverrideIfExists to identifier import
Andreas Müller
10:11 PM Revision cc973e96 (cdmlib): ref #6542 update Identifier import to support value update and more l...
Andreas Müller
10:11 PM Revision 32bcc803 (cdmlib): cleanup
Andreas Müller
10:11 PM Revision 8f8ca25c (cdmlib): add updateIdentifier to IdentifierImport
Andreas Müller
10:09 PM Revision 69339d35 (cdmlib-apps): ref #9327 adapt BfnXmlImportAddtionalTerms import to new secundu...
Andreas Müller
10:08 PM Revision 8fbe8887 (cdmlib-apps): cleanup
Andreas Müller
05:48 PM feature request #8708 (Feedback): Sort taxa in distribution editor same as in navigator
This to me looks like a duplicate. Katja, can you check and link to the according ticket and close ticket as duplicat... Andreas Müller
04:32 PM feature request #6598 (Closed): Migrate commands and handlers
Andreas Müller wrote:
> target version is missing!
>
> Can we assess in current milestone what still needs to be ...
Katja Luther
04:09 PM Revision dcaf0220 (taxeditor): ref #8431: add rootnode to status label of cdmlight export
Katja Luther
04:05 PM bug #8431: missing status bar for cdm light export

>
> ---
>
> Also we need to find out how to switch of that progress is only shown in status bar but not in dia...
Katja Luther
03:55 PM Revision c6575e6f (cdm-dataportal): ref #9582 typos in README
Andreas Kohlbecker
03:42 PM Revision 547b7def (cdm-dataportal): ref #9582 apache 2 site config templates and updated README
Andreas Kohlbecker
02:35 PM feature request #9111 (Rejected): Handle Malformed URIs
this is handled in cdmlib now, therefore I close this ticket as rejected. Katja Luther
02:31 PM bug #9390 (Feedback): Remaining issues for set secundum dialog
we should discuss if we want to remove the line break for all dialogs, then I create a new ticket for adaption of dia... Katja Luther
01:20 PM Revision 66865d7c (cdm-dataportal): ref #9582 harmonizing taxon tree module name with other blocks
Andreas Kohlbecker
12:19 PM Revision 2b3987e1 (cdm-dataportal): ref #9582 new-site.sh more robust and with basic support for ...
Andreas Kohlbecker
12:17 PM Revision 305d26ff (cdm-dataportal): ref #9582 new-site.sh more robust and with basic support for ...
Andreas Kohlbecker
10:18 AM Revision add78389 (cdm-dataportal): ref #9582 zen main theme as composer project and depencency f...
Andreas Kohlbecker

04/16/2021

10:56 PM Revision 63b94f89 (cdm-dataportal): ref #9582 re-enabling upload
Andreas Kohlbecker
10:55 PM Revision b79572e0 (cdm-dataportal): ref #9582 removing obsolete deploy.sh script
Andreas Kohlbecker
10:54 PM Revision 434e5468 (cdm-dataportal): ref #9582 correct build order by dependency and oher fixes
Andreas Kohlbecker
10:46 PM bug #9583 (Closed): Fix formatting of parent area in condensed distributions string if subareas h...
To me the result looks like expected. Reopen if not yet fully fixe. Andreas Müller
07:45 PM bug #9583 (Resolved): Fix formatting of parent area in condensed distributions string if subareas...
Applied in changeset commit:cdmlib|e2fafd15b80ee6fc8dc2cec59f0d74389ea48fe6. Andreas Müller
07:42 PM bug #9583 (Closed): Fix formatting of parent area in condensed distributions string if subareas h...
This issue is described in #8297#note-15 and has not yet been handled there.
Examples are **Tu(A** -E) or **Ca**(?C ...
Andreas Müller
10:16 PM Revision 593fe3e9 (cdm-dataportal): ref #9582 remaming cdm_portal_testing profile
Andreas Kohlbecker
10:13 PM feature request #5573 (Resolved): Cache Strategy for Media Specimen required
Andreas Müller
09:49 PM feature request #9541 (Resolved): Improve referencing objects handling
Andreas Müller
09:20 PM feature request #9537 (Resolved): Implement ratioToStructure in TaxEditor
I guess this is for review. Andreas Müller
09:19 PM bug #9526 (Closed): Sort order in E+M distribution string should be strictly alphabetic
I guess this is fixed. We may reopen if new issues arise. Andreas Müller
08:52 PM Revision 5a70408c (cdm-dataportal): ref #9582 pack-and-delpoy improved, completed and new-site s...
Andreas Kohlbecker
08:37 PM Revision 53b76085 (cdm-dataportal): ref #9582 installation profiles with lower case ids - adaptin...
Andreas Kohlbecker
08:35 PM Revision 369de2b8 (cdm-dataportal): ref #9582 installation profiles with lower case ids
Andreas Kohlbecker
07:47 PM Revision 0d7aaec6 (cdmlib): add test for tribe parsing which has a suborder ending
Andreas Müller
07:46 PM Revision ad9f3105 (cdmlib): cleanup
Andreas Müller
07:45 PM Revision e2fafd15 (cdmlib): fix #9583 bold formatting for main areas with at least 1 native sub-area
Andreas Müller
04:59 PM Revision 57db05c4 (cdm-dataportal): ref #9582 removing obsolete function from composer helper
Andreas Kohlbecker
04:53 PM Revision 58848045 (cdm-dataportal): ref #9582 updating README
Andreas Kohlbecker
04:51 PM Revision 98364e35 (cdm-dataportal): ref #9582 moving jenkins-ci script folder into root project s...
Andreas Kohlbecker
04:46 PM Revision 844455cb (cdm-dataportal): ref #9582 new delpoyment script
Andreas Kohlbecker
02:15 PM Revision a1b89d4c (taxeditor): Merge branch 'release/5.22.0' into develop
jenkins
02:15 PM Revision 16a19db5 (taxeditor): Merge branch 'release/5.22.0'
jenkins
01:58 PM Revision 3338ac1f (taxeditor): Fix NPE for Cancel in ChangeSynonymToAcceptedTaxonHandlerE4
Andreas Müller
01:58 PM Revision d33f36bb (taxeditor): cleanup and fix NPE if no active session in debug view
Andreas Müller
01:54 PM Revision 108bb193 (cdm-server): Merge branch 'release/5.22.0' into develop
jenkins
01:54 PM Revision 0deceaf8 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
01:53 PM Revision 8eba684e (cdm-server): updating poms for branch'release/5.22.0' with non-snapshot versions
jenkins
01:52 PM Revision 57dbd275 (cdm-webapp): Merge branch 'release/5.22.0' into develop
jenkins
01:52 PM Revision ffb1dfc6 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
01:52 PM Revision 278e3672 (cdm-webapp): updating poms for branch'release/5.22.0' with non-snapshot versions
jenkins
01:52 PM Revision 50e2d2fd (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.22.0
jenkins
01:52 PM Revision 707d1eb4 (cdm-vaadin): Merge branch 'release/5.22.0' into develop
jenkins
01:52 PM Revision 543fe37b (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
01:49 PM Revision f2851d5f (cdm-dataportal): Merge branch 'release/5.22.0' into develop
jenkins
01:49 PM Revision 84dbb354 (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
01:49 PM Revision 6094b465 (cdm-dataportal): updating poms for branch'release/5.22.0' with non-snapshot ve...
jenkins
01:49 PM Revision e431dcad (cdm-vaadin): updating poms for branch'release/5.22.0' with non-snapshot versions
jenkins
01:48 PM Revision b06cc9e9 (cdm-dataportal): release-preparation: production level css
jenkins
01:48 PM Revision 1e8b8504 (cdm-vaadin): jenkins bumping cdmlib.version to 5.22.0
jenkins

04/15/2021

06:03 PM Revision 861435e7 (cdm-dataportal): ref #9582 documentation
Andreas Kohlbecker
06:02 PM Revision 70a77f5c (cdm-dataportal): ref #9582 root composer project set up for creating an runnab...
Andreas Kohlbecker
06:01 PM Revision 69f53839 (cdm-dataportal): ref #9582 zen_dataportal theme as composer project
Andreas Kohlbecker
06:00 PM Revision d19eb315 (cdm-dataportal): ref #9582 data_portal module as composer project
Andreas Kohlbecker
05:59 PM Revision 664d5943 (cdm-dataportal): ref #9582 installation profiles as composer project
Andreas Kohlbecker
05:58 PM task #9582 (New): provide runnable dataportal installation bundled with composer
[Composer](https://getcomposer.org) is the de-facto standard for managing php dependencies.
Use composer to create...
Andreas Kohlbecker
04:55 PM Revision dbfb8b15 (cdmlib): Updating develop poms back to pre merge state
jenkins
04:55 PM Revision e8df6d21 (cdmlib): Merge branch 'master' into develop
jenkins
04:55 PM Revision 64953d11 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
04:55 PM Revision 0e499191 (cdmlib): Merge branch 'release/5.22.0'
jenkins
04:35 PM Revision 89f252c1 (cdmlib): updating poms for branch'release/5.22.0' with non-snapshot versions
jenkins
04:34 PM Revision a4c0b43d (cdm-dataportal): dataportal installation profiles as separate composer project
Andreas Kohlbecker
04:28 PM Revision c218de49 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.22.0-S...
jenkins
04:28 PM Revision a22ed7b4 (cdm-webapp): updating poms for 5.23.0-SNAPSHOT development
jenkins
04:28 PM Revision 622517ac (cdm-webapp): updating poms for 5.22.0 branch with snapshot versions
jenkins
04:28 PM Revision cba18d6f (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.23.0-S...
jenkins
04:23 PM Revision 4d36fd02 (cdm-vaadin): jenkins bumping cdmlib.version to 5.22.0-SNAPSHOT
jenkins
04:23 PM Revision 2edc1951 (cdm-vaadin): updating poms for 5.23.0-SNAPSHOT development
jenkins
04:23 PM Revision ea06fcad (cdm-vaadin): updating poms for 5.22.0 branch with snapshot versions
jenkins
04:22 PM Revision 91a81b9f (cdm-vaadin): jenkins bumping cdmlib.version to 5.23.0-SNAPSHOT
jenkins
04:13 PM Revision d3d0be17 (taxeditor): Updated version in pom / project files to taxeditor version : 5.23...
jenkins
04:13 PM Revision 9985027d (taxeditor): Updated version in pom / project files to taxeditor version : 5.22...
jenkins
04:12 PM Revision 76d24e9c (cdm-dataportal): updating poms for 5.23.0-SNAPSHOT development
jenkins
04:12 PM Revision 13cdd850 (cdm-server): updating poms for 5.23.0-SNAPSHOT development
jenkins
04:08 PM Revision 72f8969c (cdmlib): updating poms for 5.23.0-SNAPSHOT development
jenkins
03:34 PM Revision be5daae5 (cdm-dataportal): composer.json file for cdm_dataportal module
Andreas Kohlbecker
03:05 PM task #9579 (Worksforme): restore css3pie if needed
It is working again with compass 0.12.7 on the integration server as well as locally.
The error documented in the ...
Andreas Kohlbecker
03:02 PM Revision 2b84b35c (cdm-dataportal): ref #9579 reartivating restriction in compass-watch for compa...
Andreas Kohlbecker
02:39 PM Revision bb8be86d (cdm-dataportal): ref #9579 reactivating css3pie for compass 0.12.7
Andreas Kohlbecker
12:34 PM Revision bbe2f24e (taxeditor): ref #9537: adapt character label for ratio to
Katja Luther
12:29 PM feature request #9570 (Closed): Use tagged text for NameTypeDesginations name part
I did not encounter any problems in phycobank which are due to these changes.
Ticket can be closed
Andreas Kohlbecker
12:27 PM task #9490 (Closed): avoid rank entity in TaxonNameParts
done Andreas Kohlbecker
12:19 PM bug #9504 (Closed): Changing term tree title is not persisted
works as expected now Andreas Müller
11:48 AM Revision 06cd9255 (cdm-dataportal): removing characters which have gone astray
Andreas Kohlbecker
10:38 AM bug #9468 (Worksforme): specimen type of existing name cannot be saved
has been solved meanwhile in another context Andreas Kohlbecker
08:43 AM Revision 02d1ca76 (cdm-dataportal): typo
Andreas Kohlbecker
08:40 AM Revision 562d3bc7 (cdm-dataportal): cleaning up
Andreas Kohlbecker
08:37 AM bug #9578 (Closed): Multiselect for input of distribution editor creates duplicates
looks fine and works as expected Katja Luther

04/14/2021

10:51 PM bug #9578: Multiselect for input of distribution editor creates duplicates
I tested now and it seems to work as expected. Please also review. Andreas Müller
06:21 PM bug #9578: Multiselect for input of distribution editor creates duplicates
Katja Luther wrote:
> Sorry it is the method listChildrenOfRecursive, there the node is added to the result:
>
> ...
Andreas Müller
04:50 PM bug #9578: Multiselect for input of distribution editor creates duplicates
Andreas Müller wrote:
> Katja Luther wrote:
> > The criteria for getting the children is
> >
> > ~~~ java
> > ...
Katja Luther
04:43 PM bug #9578: Multiselect for input of distribution editor creates duplicates
Katja Luther wrote:
> The criteria for getting the children is
>
> ~~~ java
> crit.add( Restrictions.lik...
Andreas Müller
02:22 PM bug #9578: Multiselect for input of distribution editor creates duplicates
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Katja Luther wrote:
> > > > please re...
Katja Luther
02:04 PM bug #9578: Multiselect for input of distribution editor creates duplicates
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > please review my changes.
> >
> > Hav...
Andreas Müller
01:57 PM bug #9578: Multiselect for input of distribution editor creates duplicates
Andreas Müller wrote:
> Katja Luther wrote:
> > please review my changes.
>
> Have you tested this? It does not ...
Katja Luther
12:16 PM bug #9578 (Feedback): Multiselect for input of distribution editor creates duplicates
Katja Luther wrote:
> please review my changes.
Have you tested this? It does not work. And it can't work as pare...
Andreas Müller
09:53 AM bug #9578: Multiselect for input of distribution editor creates duplicates
Katja Luther wrote:
> Andreas Müller wrote:
> > This works now for taxon nodes not sharing duplicates (e.g. for sib...
Andreas Müller
09:52 AM bug #9578: Multiselect for input of distribution editor creates duplicates
please review my changes. Katja Luther
09:48 AM bug #9578: Multiselect for input of distribution editor creates duplicates
Andreas Müller wrote:
> This works now for taxon nodes not sharing duplicates (e.g. for sibblings). It still shows d...
Katja Luther
10:48 PM bug #9581 (New): Strange focus behavior in taxon navigator after right mouse click
How to reproduce:
* Open referencing objects view
* Select 2 taxa in navigator and open in distribution editor vi...
Andreas Müller
06:57 PM Revision 128e9f08 (cdmlib): cleanup
Andreas Müller
06:57 PM Revision ab18e527 (cdmlib): ref #9578 , ref #8889 fix duplicate handling in getTaxonDistributionDTO
Andreas Müller
06:38 PM bug #9468: specimen type of existing name cannot be saved
Checked it in the Test system. The described error does not occur anymore. The ticket can be closed.
(Maybe it occur...
Wolf-Henning Kusber
05:33 PM bug #9468 (Feedback): specimen type of existing name cannot be saved
seems to be fixed already, please can you verify? Andreas Kohlbecker
06:18 PM Revision 5927beb2 (cdmlib): cleanup
Andreas Müller
06:18 PM Revision 78be9787 (cdmlib): ref #9578 , ref #8889 add parentNode in getTaxonDistributionDTO() ins...
Andreas Müller
06:18 PM Revision ce131644 (cdmlib): handle UTF8 correctly in HGTaxonComparatorTest
Andreas Müller
06:18 PM Revision 273d91ee (cdmlib): ref #9578 , ref #8889 switch on sorting for recursive=false in TaxonN...
Andreas Müller
06:18 PM Revision d0b26ef2 (cdmlib): cleanup
Andreas Müller
06:18 PM Revision bf69d17d (cdmlib): ref #9578 , ref #8889 fix behavior of TaxonNodeDaoHibernateImpl.listC...
* current implementation also returns the parent which is semantically not correct and differs from implementation wi... Andreas Müller
05:28 PM bug #7943: TypeDesignationsEditor Select Reference for figure
still an open issue Andreas Kohlbecker
05:19 PM bug #9568 (Closed): TypeSpecimenEditor: Selection of a reference of an typified image
Andreas Kohlbecker
05:18 PM feature request #7599 (Closed): treeView for specimen data in dataportal
appart from the questions discussed in #9579 this ticket is now complete. Andreas Kohlbecker
05:16 PM bug #9555 (Closed): symbols for record basis (and kind of unit) in derivation tree
new ticket for further symbols #9580 Andreas Kohlbecker
05:15 PM bug #9580 (New): more symbols for record basis (and kind of unit) in derivation tree - coninuation
this is a continuation ticket for #9555
show symbols with the units-header per record basis and kind of unit if ne...
Andreas Kohlbecker
05:04 PM Revision ce564745 (cdmlib): ref #9556 avoiding collection of full derivatives tree in DTOs - usin...
Andreas Kohlbecker
04:01 PM bug #9504 (Resolved): Changing term tree title is not persisted
This should be fixed now. Please review. Katja Luther
12:53 PM bug #9504: Changing term tree title is not persisted
Maybe we can have a look to this again, now, as there is still some time for the release. If not possible to solve be... Andreas Müller
03:59 PM Revision f8d807a7 (taxeditor): ref #9504: fix saving label changes of newly created term trees
Katja Luther
02:15 PM Revision f9e96761 (cdm-dataportal): ref #7599 ref #6866 removing replaced and now unused methods
Andreas Kohlbecker
02:10 PM task #9579: restore css3pie if needed
before doing the release we need to decide for how important this is.
The compass installlation on the integration...
Andreas Kohlbecker
01:30 PM Revision 2aa06679 (cdm-server): fixing bug in postint script of debian package
Andreas Kohlbecker
01:28 PM Revision cc1886a6 (cdmlib): ref #9556 avoiding collection of full derivatives tree in DTOs - bugfix
Andreas Kohlbecker
12:47 PM bug #8233 (In Progress): [Follow up] Creating type duplicates
The persistent identifier issue works now. I set the ticket back to "In progress" as there are other remaining issues. Andreas Müller
12:38 PM feature request #9537 (Feedback): Implement ratioToStructure in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > Also the ...
Andreas Müller
09:07 AM feature request #9537: Implement ratioToStructure in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Also the button checks if a vocabulary...
Katja Luther
09:06 AM feature request #9537 (Resolved): Implement ratioToStructure in TaxEditor
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Also the formatting (label) for the ch...
Katja Luther
09:52 AM Revision e5083306 (cdmlib): ref #9578: avoid duplicates for parent and child selection
Katja Luther
09:06 AM Revision 948bc8b0 (taxeditor): ref #9537: new label for ratio to
Katja Luther
08:26 AM Revision bd13c880 (taxeditor): ref #9537: no warning if no vocabulary is chosen
Katja Luther
08:15 AM Revision 9359a3bd (taxeditor): other/given name in bulk editor and details view
Katja Luther
08:11 AM Revision 95e7a8cf (taxeditor): fix label in aggregation wizard
Katja Luther

04/13/2021

10:22 PM bug #9568: TypeSpecimenEditor: Selection of a reference of an typified image
Selection of a reference of an typified image in the TypeSpecimenEditor works now as expected, thanks. The ticket can... Wolf-Henning Kusber
04:18 PM bug #9568: TypeSpecimenEditor: Selection of a reference of an typified image
please test once the server is updated (~1h from now on) Andreas Kohlbecker
03:05 PM bug #9568 (Resolved): TypeSpecimenEditor: Selection of a reference of an typified image
Applied in changeset commit:cdm-vaadin|e8dcb430eb56a577c61ef744ce689094e2093d90. Andreas Kohlbecker
03:03 PM bug #9568: TypeSpecimenEditor: Selection of a reference of an typified image
This is an regression introduced in the context of #9480 Andreas Kohlbecker
04:48 PM feature request #9537: Implement ratioToStructure in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Also the formatting (label) for the character does not change yet e...
Andreas Müller
04:45 PM feature request #9537: Implement ratioToStructure in TaxEditor
Katja Luther wrote:
> Andreas Müller wrote:
> > Also the button checks if a vocabulary is chosen. This is not neces...
Andreas Müller
03:10 PM feature request #9537: Implement ratioToStructure in TaxEditor
Andreas Müller wrote:
> Also the formatting (label) for the character does not change yet even if it has no protecte...
Katja Luther
03:05 PM feature request #9537: Implement ratioToStructure in TaxEditor
Andreas Müller wrote:
> Also the button checks if a vocabulary is chosen. This is not necessary as the character alr...
Katja Luther
03:04 PM feature request #9537: Implement ratioToStructure in TaxEditor
Andreas Müller wrote:
> Finally, if possible, the new button should only be enabeled if a structure and a character ...
Katja Luther
03:04 PM feature request #9537: Implement ratioToStructure in TaxEditor
Andreas Müller wrote:
> The ratio to is currently only shown after the character editor was saved. It should be show...
Katja Luther
01:51 PM feature request #9537: Implement ratioToStructure in TaxEditor
Finally, if possible, the new button should only be enabeled if a structure and a character node is selected. Andreas Müller
12:24 PM feature request #9537: Implement ratioToStructure in TaxEditor
Also the formatting (label) for the character does not change yet even if it has no protected titleCache. Andreas Müller
12:22 PM feature request #9537: Implement ratioToStructure in TaxEditor
Also the button checks if a vocabulary is chosen. This is not necessary as the character already exists and only is u... Andreas Müller
12:22 PM feature request #9537 (Feedback): Implement ratioToStructure in TaxEditor
The ratio to is currently only shown after the character editor was saved. It should be shown immediately after press... Andreas Müller
04:31 PM bug #9556 (Closed): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
can be closed now Andreas Kohlbecker
04:23 PM bug #9556 (Resolved): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
after the commit:6d3c3fa9 which is rather related to `listRootUnitDTOsByAssociatedTaxon()` the web services should no... Andreas Kohlbecker
04:16 PM feature request #9332 (Closed): Rename TypeDesignationBase.source to .designationSource
should be fixed now Andreas Kohlbecker
03:40 PM feature request #9332 (Resolved): Rename TypeDesignationBase.source to .designationSource
the renamed field is causing LIEs in cdm-vaadin, so this ticket is not fully solved.
e.g.
http://test.e-taxonom...
Andreas Kohlbecker
04:11 PM Revision 6c2110e6 (cdmlib): ref #9332 adapting init strategy to renamed field source -> designati...
Andreas Kohlbecker
04:07 PM Revision 2121e775 (cdm-vaadin): ref #9480, fix #9568 restoring reference pagingProvider for media...
Andreas Kohlbecker
03:07 PM Revision 1a6e9489 (taxeditor): ref #9537: enable/disable buttons, refresh issue
Katja Luther
03:05 PM Revision e8dcb430 (cdm-vaadin): ref #9480, fix #9568 restoring reference pagingProvider for media...
Andreas Kohlbecker
02:28 PM Revision 031d9fa1 (taxeditor): ref #8233: restructure clone type designation wizard
Katja Luther
02:26 PM bug #8233: [Follow up] Creating type duplicates
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> >>...
> > > This is how it was meant. The...
Katja Luther
02:08 PM bug #8233 (Feedback): [Follow up] Creating type duplicates
Katja Luther wrote:
> Andreas Müller wrote:
>>...
> > This is how it was meant. Therefore I removed the first "NK"...
Andreas Müller
02:07 PM bug #8233: [Follow up] Creating type duplicates
Sorry I missed to push some files, please review now. Katja Luther
09:25 AM bug #8233: [Follow up] Creating type duplicates
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > I add the "fast" tag for the last issu...
Katja Luther
02:13 PM Revision 3f78f840 (taxeditor): cleanup
Andreas Müller
02:01 PM Revision a9d8d871 (taxeditor): ref #8233: adapt method call for clone typedesignation
Katja Luther
01:54 PM Revision 6d3c3fa9 (cdmlib): ref #9556 avoiding collection of full derivatives tree in DTOs
Andreas Kohlbecker
01:27 PM Revision 2119bbcd (cdmlib): ref #8233: add pref stable identifier to cloneTypedesignation method
Katja Luther
12:04 PM bug #9578: Multiselect for input of distribution editor creates duplicates
This works now for taxon nodes not sharing duplicates (e.g. for sibblings). It still shows duplicates if e.g. one sel... Andreas Müller

04/12/2021

08:35 PM bug #8233: [Follow up] Creating type duplicates
Katja Luther wrote:
> Andreas Müller wrote:
> > I add the "fast" tag for the last issue ("Add "Preferred Stable Ide...
Andreas Müller
03:35 PM bug #8233: [Follow up] Creating type duplicates
Andreas Müller wrote:
> I add the "fast" tag for the last issue ("Add "Preferred Stable Identifier" to the list of a...
Katja Luther
04:16 PM Revision 8d3e080c (taxeditor): ref #8233: add pref stable identifier field in duplicate type desi...
Katja Luther
09:51 AM Revision fd91d9a0 (cdmlib): fix ClassNotFoundException
Katja Luther

04/08/2021

03:43 PM Revision aa55643c (cdm-dataportal): ref #7599 derivate tree units: icon stack for type specimens
Andreas Kohlbecker

04/07/2021

02:24 PM Revision 2b85bf78 (cdm-dataportal): ref #7599 derivate tree with collapsible items - adapting tests
Andreas Kohlbecker

04/06/2021

10:50 PM Revision 2ed89b85 (cdm-dataportal): ref #7599 derivate tree with collapsible items
Andreas Kohlbecker
10:49 PM Revision 4ff1cfa5 (cdm-dataportal): ref #9579 ref #7599 deactivating css3pie to allow using a mo...
Andreas Kohlbecker
10:43 PM bug #9555 (In Progress): symbols for record basis (and kind of unit) in derivation tree
only some symbols are missing Andreas Kohlbecker
10:43 PM bug #9555 (Resolved): symbols for record basis (and kind of unit) in derivation tree
Andreas Kohlbecker
10:35 PM task #9579 (Worksforme): restore css3pie if needed
during the implemetation of the derivation tree view for #7599 and #6866 it was necessary to upgrade `compass` interm... Andreas Kohlbecker

04/02/2021

10:54 PM Revision 5e1d646d (taxeditor): cleanup
Andreas Müller
09:52 PM Revision 3ce2af15 (taxeditor): ref #9541 further fixes for referencing objects and related issues
Andreas Müller
09:48 PM Revision c4de8fcb (taxeditor): cleanup
Andreas Müller
08:19 PM Revision ca839fe0 (cdmlib): ref #9541 improve label for taxon nodes in ReferencingObjectFormatter
Andreas Müller
06:21 PM Revision 771e2ffd (cdmlib): ref #9541 fix potential NPE in distributionDto loading
Andreas Müller
06:20 PM Revision c6a61f11 (cdmlib): cleanup
Andreas Müller
08:27 AM bug #9504: Changing term tree title is not persisted
Actually I could not find why the newly created tree can not be edited before saving. When the tree is persisted you ... Katja Luther
03:14 AM Revision 6d684c12 (taxeditor): improve performance by first testing type before loading uuidAndTi...
Andreas Müller
03:12 AM Revision 5c1ec42c (taxeditor): improve performance by first checking preference then checking DB ...
Andreas Müller
03:11 AM Revision b25d6eaf (taxeditor): cleanup
Andreas Müller

04/01/2021

01:44 AM Revision 1f0bb7e2 (cdmlib): ref #9541 q&d add target description for untargeted sources
Andreas Müller
01:41 AM Revision 9d702f34 (cdmlib): cleanup
Andreas Müller
01:18 AM Revision c60e36b3 (cdmlib): fix #9578 remove duplicates from distributionDto service (complete test)
Andreas Müller
01:08 AM bug #9578 (Resolved): Multiselect for input of distribution editor creates duplicates
Applied in changeset commit:cdmlib|ba87a40e9a4066100dff6e13c5aebb2b1782e4b6. Andreas Müller
01:00 AM bug #9578 (Closed): Multiselect for input of distribution editor creates duplicates
if 1 record select only this record is returned
if 2 records are selected 1 record is duplicated
if 3 records a...
Andreas Müller
01:08 AM Revision ba87a40e (cdmlib): fix #9578 remove duplicates from distributionDto service
Andreas Müller
12:58 AM Revision 48a50228 (cdmlib): cleanup
Andreas Müller
12:16 AM Revision 880f5390 (taxeditor): ref #9541 refactor Open..Handlers to all use UuidAndTitleCache as ...
Andreas Müller
12:15 AM Revision b5fcddad (taxeditor): cleanup
Andreas Müller
12:08 AM Revision 2ac111f5 (cdmlib): ref #9541 add getBestOpenInTargetType to ReferencingObjectDto
Andreas Müller
03:51 PM bug #9577 (New): Enable copy for multiple cell selection in bulk editor
see #9544 Katja Luther
03:49 PM feature request #9544 (Closed): In bulkeditor the strings should be copyable
To have this issue in the actual release I close this ticket and create a new ticket for the multiselect, because I c... Katja Luther
02:52 PM Revision bd4f58f8 (taxeditor): fix comparator for structures and properties in characterEditor
Katja Luther
02:37 PM feature request #9537 (Resolved): Implement ratioToStructure in TaxEditor
This should be fixed.
The ratio to structure can be added in character editor by using the button in character edi...
Katja Luther
02:37 PM Revision 50813944 (taxeditor): add new class openDistributionPerAreaStatusAdminWizardHandler - re...
Katja Luther
02:36 PM Revision c0bc149a (taxeditor): ref #9537: add button to ratioTo element - l10n changes
Katja Luther
12:03 PM Revision a5423594 (taxeditor): add new class openDistributionPerAreaStatusAdminWizardHandler - co...
Katja Luther
11:57 AM task #9576 (Rejected): Add tests for homotypic group name comparator
from #9567:
Maybe you can still add some tests for HomotypicGroupNameComparator which explicitly handle specific i...
Katja Luther
11:56 AM task #9567 (Closed): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
this issue seems to be fixed. add a new ticket for the tests. Katja Luther
11:55 AM feature request #9571 (Closed): Improve sec-formatting for taxa with webpage secundum
this works as expected. Katja Luther
11:53 AM Revision ec94a2ec (taxeditor): add new class openDistributionPerAreaStatusAdminWizardHandler - co...
Katja Luther
11:51 AM Revision a53a3bf7 (taxeditor): adapted base class
Katja Luther
11:34 AM Revision 9accb14e (taxeditor): add new class openDistributionPerAreaStatusAdminWizardHandler
Katja Luther
11:34 AM Revision fa6d38ce (taxeditor): ref #9537: add button to ratioTo element
Katja Luther
10:59 AM Revision fd6c6dec (taxeditor): ref #9541 use openInTarget for OpenIn (CdmViewerUtilE4)
Andreas Müller
10:56 AM Revision 824ea259 (taxeditor): ref #9541 fix missing OpenIn menu for ordinary CdmBase input
Andreas Müller
03:32 AM Revision 69dc5be6 (taxeditor): ref #9541 open referencing objects in openIn target
Andreas Müller
03:06 AM Revision 18bd5760 (cdmlib): ref #9541 fix query on IdentifiableSource and SingleSource
Andreas Müller

03/31/2021

01:55 AM Revision a6dcfe44 (cdmlib): ref #9541 Source for => for
Andreas Müller
01:28 AM Revision 7d58503b (taxeditor): ref #9541 adapt bulk editor opener for referencing objects
Andreas Müller
01:27 AM Revision 869f9c7a (taxeditor): cleanup
Andreas Müller
01:06 AM Revision e61f3556 (taxeditor): cleanup
Andreas Müller
01:05 AM Revision 58e6cb8f (taxeditor): ref #9541 new referencing objects implementation in TaxEditor
Andreas Müller
01:05 AM Revision 98b82274 (taxeditor): cleanup
Andreas Müller
12:46 AM Revision 99de1ab2 (cdmlib): ref #9541 further improve referencing object handling
Andreas Müller
10:35 PM Revision dcef45f2 (cdmlib): ref #9541 deproxy target entity and referencing entity
Andreas Müller
09:58 PM Revision 8b7fdba9 (cdmlib): ref #9541 DTOs for referencing objects and server side initialization
Andreas Müller
09:28 PM Revision 16922c6f (cdmlib): ref #9541 move distance formatting to own formatting class
Andreas Müller
09:22 PM Revision 79f6280d (cdmlib): cleanup
Andreas Müller
06:50 PM feature request #9537 (In Progress): Implement ratioToStructure in TaxEditor
Implemented a button to add ratio to structure to character.
Still needed is a button in details view to remove th...
Katja Luther
06:49 PM Revision 2795c3ee (cdmlib): ref #9537: fix select for characterDto -continue
Katja Luther
06:49 PM Revision a8d4957f (taxeditor): ref #9537: adapt editor to ratioTo in Character - continue
Katja Luther
06:25 PM Revision 7d80a1af (cdmlib): ref #9537: fix select for characterDto
Katja Luther
06:22 PM Revision 6c8cfbd4 (taxeditor): ref #9537: adapt editor to ratioTo in Character
Katja Luther
06:20 PM Revision e2acbb7a (cdmlib): ref #9537: adapt CharacterDto to ratioTo - avoid NPE
Katja Luther
06:19 PM Revision 74c1395d (cdmlib): ref #9537: adapt CharacterDto to ratioTo
Katja Luther
12:17 PM feature request #9575 (Closed): Allow flag to include authors in taxon and name search in TaxEditor
In #6128 the possibility to include authors were added to the according service. We should also allow in TaxEditor de... Andreas Müller
12:15 PM feature request #9574 (Closed): Add html tags for names in NameTypeDesignation in CdmLightExport
this is fixed.
Walter checked it.
Katja Luther
12:12 PM feature request #9574 (Closed): Add html tags for names in NameTypeDesignation in CdmLightExport
mail:
noch eine Fragen, die man eventuell schnell lösen könnte (für mich recht kompliziert): Kannst Du die als Typ...
Katja Luther
12:14 PM Revision 21d27e0f (cdmlib): ref #9574: add html tags to nameTypeDesignation string
Katja Luther
11:26 AM feature request #9544 (Feedback): In bulkeditor the strings should be copyable
This works as expected. Only multiple cell selection still has the old behavior. If this is very easy to fix, please ... Andreas Müller
11:18 AM bug #9504: Changing term tree title is not persisted
Katja Luther wrote:
> Andreas Müller wrote:
> > This still does not work
>
> I tested on nightly and it works? D...
Andreas Müller
10:06 AM bug #9504: Changing term tree title is not persisted
Andreas Müller wrote:
> By the way, it would good to use an underscore before the default title like "_New feature t...
Katja Luther
09:32 AM bug #9504: Changing term tree title is not persisted
Andreas Müller wrote:
> This still does not work
I tested on nightly and it works? Did you update?
Katja Luther
11:00 AM feature request #9331 (Closed): Distinguish DescriptionElementSource and NamedSource
The adaptions in editor work and the class structure looks good. Katja Luther
10:55 AM feature request #9561 (Closed): In name and taxon search if titleCache is protected the search sh...
works now as expected. Katja Luther
10:46 AM feature request #9570: Use tagged text for NameTypeDesginations name part
for the cdmLight usecase it works as expected. Maybe Ak should have a look whether the implementation works for phyco... Katja Luther
10:37 AM Revision 7c3d49e6 (cdmlib): ref #9515: remove second call setIndividualsAssociationDescriptionPer...
Katja Luther
10:34 AM feature request #9515 (Closed): Add DescriptionType to TaxonDescription of TaxonAssociations in A...
adapted the code, tested and worked as expected. Katja Luther
10:33 AM bug #9531 (Closed): Add Names in OriginalSpelling to the delete configuration
adapt the error message. Katja Luther
10:28 AM Revision 4e7d237c (cdmlib): ref #9531: adapt error message for original spelling
Katja Luther
10:16 AM bug #9573 (New): Space between collection sections and elements above and behind are too large
see #9549 and others Katja Luther
10:15 AM feature request #9549 (Closed): Reduce visible fields for nomenclatural source and secundum sourc...
Andreas Müller wrote:
> This works. Only there is much space between "detail" and "Links" (for secundum reference) a...
Katja Luther
10:06 AM feature request #9572 (Closed): After creating a new term tree set the focus to the new tree
... and in details view in title cache field Katja Luther

03/30/2021

11:54 PM Revision 0e43cf40 (cdmlib): fix #9571 some more documentation
Andreas Müller
11:51 PM Revision 1b04f305 (cdmlib): fix #9571 fix tests in persistence and service
Andreas Müller
11:39 PM Revision 57562b06 (cdmlib): fix tests for now more specific cache strategy
Andreas Müller
11:38 PM Revision f56a9bfd (cdmlib): cleanup
Andreas Müller
11:38 PM Revision 178b6ca0 (cdmlib): fix #9571 also allow new formatting for databases and maps
Andreas Müller
11:02 PM feature request #9571: Improve sec-formatting for taxa with webpage secundum
this should be fixed, can you please review Andreas Müller
11:01 PM feature request #9571 (Resolved): Improve sec-formatting for taxa with webpage secundum
Applied in changeset commit:cdmlib|6202dea80501881fb388073b428c15c4c0fc255b. Andreas Müller
10:48 PM feature request #9571 (Closed): Improve sec-formatting for taxa with webpage secundum
WGB:
mir ist gerade aufgefallen, dass es wohl keine solche Short-Citation (anlaog zu Autor-Nachname oder Teamnachn...
Andreas Müller
11:01 PM Revision f21ad31e (cdmlib): rename ref=>sec
Andreas Müller
11:00 PM Revision be1d4d1a (cdmlib): add short specific test
Andreas Müller
11:00 PM Revision 6202dea8 (cdmlib): fix #9571 improve sec-formatting for taxa with webpage secundum
Andreas Müller
10:58 PM Revision aa7def03 (cdmlib): cleanup
Andreas Müller
09:25 PM Revision 9cb2b967 (cdmlib): fix #9570 cleanup
Andreas Müller
09:21 PM Revision f1aa9b21 (cdmlib): fix #9570 use name cache strategy for tagged text creation
Andreas Müller
09:06 PM feature request #9570: Use tagged text for NameTypeDesginations name part
Please review. If anything doesn't work as expected please add test to newly created test class. Andreas Müller
09:02 PM feature request #9570 (Resolved): Use tagged text for NameTypeDesginations name part
Applied in changeset commit:cdmlib|fe3e32ab2e841cc1ca2fbec4734e32e0ee8c52f4. Andreas Müller
09:01 PM feature request #9570 (Closed): Use tagged text for NameTypeDesginations name part
... and prepare for tagged text for other type designation categories Andreas Müller
09:02 PM Revision fe3e32ab (cdmlib): fix #9570 fix tagged text for NameTypeDesignation
Andreas Müller
08:58 PM Revision 26f46592 (cdmlib): cleanup
Andreas Müller
07:40 PM Revision c441f66b (cdmlib): ref #9567 adapt javadoc
Andreas Müller
03:00 PM feature request #9544 (Resolved): In bulkeditor the strings should be copyable
Andreas Müller
02:27 PM task #9569 (New): Delete taxon and delete name should use the same UI and same semantics for dele...
Currently the delete name configurator for deleting taxa and names differ currently. E.g. the delete type designation... Andreas Müller
02:13 PM bug #9531 (Feedback): Add Names in OriginalSpelling to the delete configuration
In the error message we should use "... original spelling" , not camel case.
Except for this the ticket can be clo...
Andreas Müller
01:45 PM bug #9562 (Closed): Publish flag of field units and derived units are not handled correctly
This seems to work Andreas Müller
01:40 PM bug #9533 (Closed): NPE when reusing name for new taxon
This seems to work now Andreas Müller
01:32 PM feature request #9540: Handle classification source as source in TaxEditor
I guess this is fast as it is mostly c&p from other single sources Andreas Müller
01:29 PM feature request #9328 (Closed): Adapt Editor to switch to originalSource for taxon secundum
Works as expected. Andreas Müller
01:26 PM bug #9504: Changing term tree title is not persisted
By the way, it would good to use an underscore before the default title like "_New feature tree". Also having the foc... Andreas Müller
01:25 PM bug #9504 (Feedback): Changing term tree title is not persisted
This still does not work Andreas Müller
01:18 PM feature request #9545 (Closed): Remove "External Link type" completely
Andreas Müller
01:03 PM feature request #9549 (Feedback): Reduce visible fields for nomenclatural source and secundum sou...
This works. Only there is much space between "detail" and "Links" (for secundum reference) and between "details" and ... Andreas Müller
12:37 PM task #9567 (Resolved): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
The mentioned issues should be fixed.
Maybe you can still add some tests for HomotypicGroupNameComparator which ex...
Andreas Müller
12:27 PM task #9567 (Feedback): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
I fixed the potetial NPE and adapted the compare to include hybrid sign if names do not differ in any other part. Andreas Müller
12:23 PM task #9567 (Resolved): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Applied in changeset commit:cdmlib|e0c610f10302b0c755f509a33bd3df645077ea69. Andreas Müller
11:42 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
I would add another comparison if the first two comparisons return 0 to compare the not normalized titleCache, do you... Katja Luther
11:24 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > In handleSameBasionym a return was missi...
Katja Luther
10:36 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Andreas Müller wrote:
> Katja Luther wrote:
> > In handleSameBasionym a return was missing. After fixing that the r...
Katja Luther
10:11 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Katja Luther wrote:
> In handleSameBasionym a return was missing. After fixing that the result is correct.
> But ma...
Andreas Müller
08:46 AM task #9567 (Feedback): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
In handleSameBasionym a return was missing. After fixing that the result is correct.
But maybe the NPE should be avo...
Katja Luther
12:29 PM Revision c5bd49b5 (cdmlib): ref #9567 slightly adapt the last fix
Andreas Müller
12:23 PM Revision e0c610f1 (cdmlib): fix #9567 fix missing defined order if names differ only in hybrid sign
Andreas Müller
12:13 PM Revision 7555e895 (cdmlib): ref #9567 fix potential NPE in TaxonComparator if used in HomotypicGr...
Andreas Müller
11:53 AM bug #9566 (Closed): Handle nomenclatural standing correctly in cdmlight / sorting algorithms
this works now as expected, also for the homotypic groups in editor. Katja Luther
11:53 AM bug #9441 (Closed): Move names with invalid designation name relationships to the end in taxon co...
this works now as expected, also for the homotypic groups in editor. Katja Luther
10:28 AM bug #9568 (Closed): TypeSpecimenEditor: Selection of a reference of an typified image
Vaadin TypeSpecimenEditor (Test as well as production):
With change of the typification reference with preselected...
Wolf-Henning Kusber
08:37 AM Revision ee68d8ba (cdmlib): ref #9567: fix handleSameBasionym comparison
Katja Luther

03/29/2021

09:15 PM bug #9566 (Resolved): Handle nomenclatural standing correctly in cdmlight / sorting algorithms
Please review. Andreas Müller
06:58 PM bug #9566 (Closed): Handle nomenclatural standing correctly in cdmlight / sorting algorithms
This includes using the correct symbol whenenver a "name" is a designation only.
And sorting designations to the e...
Andreas Müller
09:13 PM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
please review Andreas Müller
08:46 PM task #9567 (Resolved): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Applied in changeset commit:cdmlib|8432293fbc9496c0b4c50bda3516ef9e0ac3b984. Andreas Müller
08:46 PM task #9567 (Closed): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Both classes have mostly the same code so they are very redundant. HGNameComparator seems to be an adapted copy of HG... Andreas Müller
08:46 PM Revision 8432293f (cdmlib): fix #9567 unify HomotypicGroupTaxonComparator and HomotypicGroupNameC...
Andreas Müller
08:44 PM Revision 882b5f7f (cdmlib): cleanup
Andreas Müller
07:44 PM Revision b9806393 (cdmlib): ref #9566 use nomenclatural standing also for name ordering with Homo...
Andreas Müller
07:43 PM Revision 0dbab4a2 (cdmlib): ref #9566 use invalid designation symbol for all names with nomenclat...
Andreas Müller
07:30 PM Revision 37f45eff (cdmlib): ref #9566 use nomenclatural standing for taxon ordering
Andreas Müller
07:25 PM Revision 035e8577 (cdmlib): cleanup
Andreas Müller
06:49 PM feature request #9561: In name and taxon search if titleCache is protected the search should run ...
I adapted the search. Can you please test again. I havn't tested yet in TaxEditor, only in test class (see code). Andreas Müller
06:45 PM feature request #9561 (Resolved): In name and taxon search if titleCache is protected the search ...
Applied in changeset commit:cdmlib|571eb9f1582883152db414442c0f878d7925280b. Andreas Müller
10:50 AM feature request #9561: In name and taxon search if titleCache is protected the search should run ...
Yes, I also thought about this but did not implement it such as I did not want to have all the subspecies in the resu... Andreas Müller
10:39 AM feature request #9561 (Feedback): In name and taxon search if titleCache is protected the search ...
It works as expected, but searching without authors for a titlecache with authors does not match. Maybe we should add... Katja Luther
06:45 PM Revision 571eb9f1 (cdmlib): fix #9561 make protectedTitleCache search a search with MatchMode.Be...
Andreas Müller
06:45 PM Revision b634cc70 (cdmlib): cleanup
Andreas Müller
12:52 PM Revision dbe61bd9 (cdm-dataportal): ref #7599 ref #6866 fixing layout problem in typedesignations...
Andreas Kohlbecker
11:55 AM Revision 5fd82374 (cdmlib): ref #9555 IEnumTerms with uuid in json
Andreas Kohlbecker
11:55 AM Revision 277bccd4 (cdm-dataportal): ref #9555 derived unit tree headers with symbols for record base
Andreas Kohlbecker
11:06 AM feature request #8968 (Closed): filter Bulk editor for created by
created by moved, close this ticket. Katja Luther
10:53 AM bug #9533 (Resolved): NPE when reusing name for new taxon
Andreas Müller wrote:
> Andreas Müller wrote:
> > When deleting the selected name again I now get another NPE:
>
...
Katja Luther
10:46 AM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
I removed that the derivatives are added to the fieldUnitDto in loadFieldUnitDto(). Katja Luther
10:45 AM Revision 5446c6d5 (cdmlib): ref #9556: remove derivates from fieldUnitDto in loadFieldUnitDto
Katja Luther
10:42 AM task #9558 (Closed): General tests for cdmlight export
Looks fine. Katja Luther
10:16 AM Revision 61f058d5 (cdmlib): adapt symbol for misspellings
Katja Luther
08:38 AM bug #9565 (New): revise name render templates selection strategy
in the flora of cuba the syn-sec. references are expected to be shown:
http://portal.cybertaxonomy.org/flora-cuba/...
Andreas Kohlbecker
07:36 AM Revision 2088cb30 (cdmlib): adapt NomenclaturalStatus String in CdmLight
Katja Luther

03/26/2021

04:54 PM Revision 82772845 (cdm-dataportal): ref #6866 removing solved TODO comments
Andreas Kohlbecker
04:52 PM Revision 39f88620 (cdmlib): ref #9563 TODO comment
Andreas Kohlbecker
04:51 PM Revision 99a137ea (cdm-dataportal): ref #6866 no hover effect of derivate tree headers on specime...
Andreas Kohlbecker
04:23 PM task #9564 (New): synonymy: suppress output of sec references if it is equal with the accepted ta...
"Da wäre die Möglichkeit interessant, nur die sec.Refs. anzuzeigen, die NICHT die gleiche sec.-Ref. haben, die also d... Andreas Kohlbecker
04:19 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
so we should modify this service method so that it no longer add the derivatives or is there an alternative service m... Andreas Kohlbecker
04:07 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
Andreas Kohlbecker wrote:
> reopening this issue since `loadFieldUnitDTO()` is being used in the Taxeditor
>
> @K...
Katja Luther
03:57 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
DerivedUnitFacadeController.doGetFieldObjectMediaDTO() is no longer using loadFieldUnitDTO see commit:3309605f
there...
Andreas Kohlbecker
02:32 PM bug #9556 (Feedback): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
reopening this issue since `loadFieldUnitDTO()` is being used in the Taxeditor
@Katja: are the derivatives of the ...
Andreas Kohlbecker
02:26 PM bug #9556 (Rejected): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
since the intermediate units are not used at all by consuming methods, they should be skipped completely.
Andreas Kohlbecker
12:16 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
This method is kind of misused: After solving #9557 it is only being used by `.DerivedUnitFacadeController.doGetField... Andreas Kohlbecker
04:13 PM task #6208 (New): implement synonymy service responding with DTO
Andreas Müller
04:07 PM task #6208: implement synonymy service responding with DTO
I think we should reopen this ticket since we will be working on this this year Andreas Kohlbecker
04:10 PM bug #9562: Publish flag of field units and derived units are not handled correctly
this should be fixed. The problem was that the value for the publish checkbox was taken from DerivedUnitFace.isPublis... Katja Luther
04:07 PM bug #9562 (Resolved): Publish flag of field units and derived units are not handled correctly
Applied in changeset commit:taxeditor|6dd14e6fb067f81fb1deba7377d5bf81312a5991. Katja Luther
03:59 PM bug #9562 (Closed): Publish flag of field units and derived units are not handled correctly
when editing the field unit publish flag the publish flag of the derivate units are changed, too and/or not saved cor... Katja Luther
04:03 PM bug #9563 (New): MediaDTO factory method supports media representation preferences
see comment in code:
~~~java
/**
* Creates a list of DTOs from the Media entity.
* For each Medi...
Andreas Kohlbecker
04:01 PM Revision 6dd14e6f (taxeditor): fix #9562: getting the correct value for publish flag of field uni...
Katja Luther
03:55 PM Revision 3309605f (cdmlib): ref #9556 DerivedUnitFacadeController.doGetFieldObjectMediaDTO() is n...
Andreas Kohlbecker
03:51 PM Revision 39a46fb7 (cdm-dataportal): ref #9557 using new findRootUnitDTOs serivice in dataportal
Andreas Kohlbecker
02:00 PM bug #9559: OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpublished units
Andreas Kohlbecker wrote:
> The priority of this ticket depends on the question if there are projects with units whi...
Andreas Müller
01:57 PM bug #9559 (New): OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpublishe...
I think this ticket should be checked against #8424 and #4484 if they are duplicates of each other Andreas Müller
11:12 AM bug #9559 (Feedback): OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpub...

The priority of this ticket depends on the question if there are projects with units which must be undisclosed and ...
Andreas Kohlbecker
11:09 AM bug #9559 (New): OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpublishe...
All methods in OccurrenceServiceImpl which deliver units for the data portal via web services need to filter out unpu... Andreas Kohlbecker
01:54 PM feature request #9561: In name and taxon search if titleCache is protected the search should run ...
Please review Andreas Müller
12:08 PM feature request #9561 (Resolved): In name and taxon search if titleCache is protected the search ...
Applied in changeset commit:cdmlib|9bf89673c622c6823cefe921429b1f2438dc3c0a. Andreas Müller
12:06 PM feature request #9561 (Closed): In name and taxon search if titleCache is protected the search sh...
... otherwise users may think the name does not exist yet if the nameCache is not filled correctly.
Currently name...
Andreas Müller
12:46 PM Revision 6656176a (taxeditor): rename detailsview classes from feature -> term - continue
Katja Luther
12:45 PM Revision cef1d6a8 (taxeditor): rename detailsview classes from feature -> term
Katja Luther
12:38 PM Revision 58bf9462 (taxeditor): ref #9504: handle changes of title
Katja Luther
12:38 PM bug #9504 (Resolved): Changing term tree title is not persisted
this is fixed Katja Luther
12:33 PM Revision 0899d61e (taxeditor): fix #9545: remove external link type
Katja Luther
12:25 PM Revision d1bb1fa2 (cdmlib): fix incorrect load method
Andreas Müller
12:07 PM Revision 9bf89673 (cdmlib): fix #9561 fix search searches on titleCache also if titleCache is pr...
Andreas Müller
12:00 PM bug #9557 (Closed): implement occurrence/{uuid}/rootUnitDTOs
Andreas Kohlbecker
10:39 AM bug #9557: implement occurrence/{uuid}/rootUnitDTOs
the web service `occurrence/{uuid}/rootUnitDTOs` and service method `OccurrenceServiceImpl.findRootUnitDTOs()` are mi... Andreas Kohlbecker
11:55 AM Revision 0299ccff (cdmlib): unsind session load instead of session refresh
Andreas Kohlbecker
11:52 AM Revision b1859797 (cdmlib): ref #9557 renaming method to correct plural form
Andreas Kohlbecker
11:52 AM Revision 32f049c7 (cdmlib): ref #9557 findRootUnitDTOs service and controller method
Andreas Kohlbecker
11:52 AM Revision 29a1a72a (cdmlib): ref #9557 removing obsolete findFieldUnitDTO methods
Andreas Kohlbecker
11:48 AM feature request #9544: In bulkeditor the strings should be copyable
this is implemented, please review. Katja Luther
11:48 AM Revision f8757840 (taxeditor): ref #9544: all elements of bulkeditor should be copyable
Katja Luther
10:15 AM Revision 901b167b (cdmlib): unignore not-failing test
Andreas Müller
10:15 AM Revision 22b93d67 (cdmlib): cleanup
Andreas Müller
10:08 AM Revision 3470949e (taxeditor): fix #9545: remove external link type
Katja Luther
10:08 AM feature request #9545: Remove "External Link type" completely
please review Katja Luther
10:08 AM feature request #9545 (Resolved): Remove "External Link type" completely
Applied in changeset commit:taxeditor|3470949e9aa012a03d23c1b0e44603ed698ee056. Katja Luther
10:00 AM feature request #9328 (Resolved): Adapt Editor to switch to originalSource for taxon secundum
this is implemented, please review. Katja Luther
09:59 AM feature request #9549 (Resolved): Reduce visible fields for nomenclatural source and secundum sou...
this is fixed, please review. Katja Luther
09:56 AM Revision 3bdbeb62 (cdmlib): cleanup
Andreas Müller
09:40 AM Revision befe05b3 (cdmlib): ref #9558 adapt test data after full sample import test to run in suite
Andreas Müller
09:21 AM Revision 0e7b64fb (taxeditor): ref #9549: adapt editor to secundum as originalsource and remove u...
Katja Luther

03/25/2021

11:33 PM Revision 157fcc13 (cdmlib): ref #9558 exception, error and warning test and full data sample tes...
Andreas Müller
11:32 PM task #9558 (Resolved): General tests for cdmlight export
This is fixed. Please review. Andreas Müller
11:31 PM task #9558 (Closed): General tests for cdmlight export
all tests for cdmlight export should include an exception, error and warning test.
Also a fullDataSample (FullCove...
Andreas Müller
11:27 PM Revision 5782e289 (cdmlib): add hermaphrodite to test terms
Andreas Müller
11:06 PM Revision 1be54c81 (cdmlib): add hostplant to test terms
Andreas Müller
05:54 PM bug #9557 (Closed): implement occurrence/{uuid}/rootUnitDTOs
see http://int.e-taxonomy.eu/cdmserver/integration_reference/occurrence/8259122c-7140-44f3-980e-1a6506ce8f50/fieldUni... Andreas Kohlbecker
05:52 PM bug #9556 (Closed): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
see http://localhost:8080/occurrence/8585081c-b73b-440b-b349-582845cf3fb4/fieldUnitDTOs.json
the response data ma...
Andreas Kohlbecker
05:22 PM bug #9555 (Closed): symbols for record basis (and kind of unit) in derivation tree
show symbols with the units-header per record basis and kind of unit if needed
A quickly assembled list:
**reco...
Andreas Kohlbecker
04:03 PM feature request #9554 (New): option to suppress type designations in portal
in the http://portal.cybertaxonomy.org/flora-cuba/ typedesignations are just hidden per css. The related footnotes ar... Andreas Kohlbecker
04:01 PM bug #9553: Synonymy is missing in table of content
The same is true for Polyt. Keys Walter Berendsohn
03:50 PM bug #9553 (New): Synonymy is missing in table of content
Configuration:
* Tabless Taxon page
* Synonym as separate tab
==> the synonymy is missing in the TOC
htt...
Andreas Kohlbecker
01:09 PM bug #9550 (Closed): Recognize PhytoKeys and PLoS ONE in name parser
Test run as expected. Andreas Müller
01:04 PM Revision 3dde5e8a (cdmlib): ref #9550 fixing title in test
Andreas Müller
12:48 PM feature request #9552: Add e-article number to Reference
ERS:
... und so etwas ist auch nicht parsable (fascicle > 4 Zeichen): Lepyrodiclis alinihatii Menemen & al. in Nor...
Andreas Müller
09:38 AM feature request #9552 (New): Add e-article number to Reference
Journals publishing online have started giving numbers for there electronically published articles which seem to have... Andreas Müller
12:40 PM Revision bf382cb7 (cdmlib): ref #9550 add PLoS ONE to the explicit journal title list
Andreas Müller
10:47 AM Revision 31f131cb (cdmlib): cleanup
Andreas Müller
10:47 AM Revision 7b166086 (cdmlib): implement user friendly class name without camel case
Andreas Müller
01:19 AM Revision 940e1f09 (taxeditor): cleanup
Andreas Müller

03/24/2021

09:58 PM task #9014 (In Progress): Unparsable name strings
Andreas Müller
05:47 PM Revision eb6207d9 (cdmlib): adding NamedSource.citation to json configuration
Andreas Kohlbecker
05:45 PM Revision f4fce2b7 (cdmlib): cleanup
Andreas Müller
05:44 PM Revision a5a174a8 (cdmlib): cleanup
Andreas Müller
04:45 PM bug #9551 (Resolved): Recognize "series" in article parsing
Applied in changeset commit:cdmlib|d9aa603aade3ded73eedd57d346e478e820073a4. Andreas Müller
04:16 PM bug #9551 (Resolved): Recognize "series" in article parsing
... maybe also books etc. Andreas Müller
04:45 PM Revision 8e78f363 (cdmlib): cleanup
Andreas Müller
04:44 PM Revision d9aa603a (cdmlib): fix #9551 and #9550 seriesPart parsing for articles (and books?) and...
Andreas Müller
02:47 PM Revision 2f5cf318 (cdm-dataportal): ref #9332 adapting portal to model type designation property ...
Andreas Kohlbecker
02:45 PM Revision 2f206257 (cdmlib): ref #9332 adapting further init strategies
Andreas Kohlbecker
02:45 PM Revision 63367139 (cdmlib): ref #9332 adapting DTO to property change source -> designationSource
Andreas Kohlbecker
02:36 PM Revision 843dce37 (taxeditor): fix fragment.e4xmi after renaming of termtree
Katja Luther
02:20 PM bug #9550 (Resolved): Recognize PhytoKeys and PLoS ONE in name parser
Applied in changeset commit:cdmlib|a119dab72f372797dc5e8afd8f34c53baa3e7440. Andreas Müller
02:19 PM bug #9550 (Closed): Recognize PhytoKeys and PLoS ONE in name parser
e.g. Pseudopodospermum baeticum (DC.) Zaika & al. in PhytoKeys 137: 68. 2020 Andreas Müller
02:20 PM Revision a119dab7 (cdmlib): fix #9550 , ref #9014 include PhytoKeys in name parser
Andreas Müller
12:47 PM Revision 805f62dc (cdmlib): cleanup
Andreas Müller
11:25 AM feature request #8920: Make reference URL available in details view
WGB:
Erstmal zum Direktlink zur Literatur-URL aus dem Details-VIew – fände ich wirklich toll (siehe ganz unten), d...
Andreas Müller
11:22 AM Revision d7849510 (cdmlib): ref #9332 adapting initstrategy
Andreas Kohlbecker
11:19 AM feature request #9549: Reduce visible fields for nomenclatural source and secundum source in TaxE...
WGB:
Wenn Ihr an dieser Stelle schon am Arbeiten seid: Nochmal zum neuen Dialog, mit dem ich gar nicht glücklich b...
Andreas Müller
11:15 AM feature request #9549 (Closed): Reduce visible fields for nomenclatural source and secundum sourc...
Currently it shows the fields "type" and "description" for links and "original information", "idNamespace" and "idInS... Andreas Müller
11:03 AM feature request #9548 (New): Handle links to websites, webapps or similar in image galleries (sim...
Sometimes users use links to websites within an image gallery. These usually are identified by mime type "text/html",... Andreas Müller
10:59 AM feature request #9547 (New): Show warning in TaxEditor if a MediaRepresentation can not be shown ...
Sometimes users use links to websites within an image gallery. These usually are identified mime type "text/html" or ... Andreas Müller
10:51 AM feature request #9067 (Closed): [DISCUSS] Allow media to support external links not being files
Andreas Kohlbecker wrote:
> I actually see no benefit of the "solutions" 2 - 4 over 1.
>
> Adding additional fiel...
Andreas Müller
10:45 AM Revision 61b2cc21 (cdmlib): ref #6866 fixing bug in DeterminationEventDTO
Andreas Kohlbecker
10:45 AM Revision 4d7ab017 (cdmlib): ref #6866 pulling determinedNames up to SpecimenOrObservationDTO
Andreas Kohlbecker
10:45 AM Revision 324aac32 (cdmlib): ref #6866 extending init strategy for sources
Andreas Kohlbecker
10:45 AM Revision d1210556 (cdmlib): ref #6866 SpecimenOrObservationBaseDTO with DeterminationEventDTOs
Andreas Kohlbecker
10:43 AM feature request #9546 (New): [DISCUSS] Merge ExternalLink and MediaRepresentation
... once MediaRepresentation has been merged with MediaRepresentationPart
Both classes store common information li...
Andreas Müller
10:30 AM Revision 42c6fd16 (cdm-dataportal): ref #7599 ref #6866 fixing more bugs in determinations display
Andreas Kohlbecker
10:24 AM feature request #9296: Preference to show/not show infrageneric epithet for species
NK:
zufällig bin ich nun wieder auf den Hintergrund in der Botanik gestoßen:
Code, https://www.iapt-taxon.org/n...
Andreas Müller
10:01 AM feature request #9545 (Closed): Remove "External Link type" completely
There is no real need for the ExternalLink.type attribute as today browsers all know how to open e.g. pdf. This was a... Andreas Müller
09:52 AM bug #9538 (Closed): Changing accepted to synonym closes name editor tab even if canceled
I also can't reproduce anymore. So I close and reopen if it appears again. Andreas Müller
08:36 AM bug #9538 (Resolved): Changing accepted to synonym closes name editor tab even if canceled
I can't reproduce this exception, also on nightly version. Maybe there was a state where the exception appeared. Katja Luther
09:28 AM Revision ac730eca (taxeditor): cleanup
Andreas Müller
09:20 AM bug #9542 (Closed): Bulk Editor search does not work after opening a name out of the bulk editor
Works as expected and code looks reasonable. Andreas Müller

03/23/2021

10:36 PM Revision 2316d086 (cdm-dataportal): ref #7599 ref #6866 fixing bug in determinations display#
Andreas Kohlbecker
10:24 PM Revision 38a98e54 (cdm-dataportal): ref #6866 showing unit annotations (AnnotationsAndSources sup...
Andreas Kohlbecker
06:17 PM Revision 648b078c (cdm-dataportal): ref #6866 fixing buf in source loading and adapting test
Andreas Kohlbecker
05:46 PM Revision 8c24201a (cdm-dataportal): ref #7599 ref #6866 adapting tests to latest changes
Andreas Kohlbecker
05:45 PM Revision b56eba84 (cdm-dataportal): ref #6866 adding missing class
Andreas Kohlbecker
05:36 PM Revision 8571d50c (cdm-dataportal): ref #6866 more determination details
Andreas Kohlbecker
04:10 PM Revision 9eeb624f (cdm-dataportal): ref #6866 adding markers to specimen page
Andreas Kohlbecker
03:58 PM Revision 8b3aa5d4 (cdm-dataportal): removing theme function for markers
Andreas Kohlbecker
02:45 PM Revision c1bf88ee (cdm-dataportal): ref #6866 display of sources
Andreas Kohlbecker
01:43 PM feature request #9544: In bulkeditor the strings should be copyable
I guess this is fast to implement. If not, remove the tag. Andreas Müller
11:54 AM feature request #9544 (Closed): In bulkeditor the strings should be copyable
The user should be able to copy out of all columns in bulkeditor. Katja Luther
11:01 AM Revision d4066259 (taxeditor): cleanup and subtasks for referencing objects progress monitor
Andreas Müller
10:46 AM Revision 69e39ae0 (taxeditor): ref #7311: keep drop down open and adapt filter
Katja Luther
09:47 AM Revision fc0d671e (taxeditor): ref #6229: fix problems with multilanguage support and title gener...
Katja Luther
09:25 AM Revision 8b647486 (cdm-dataportal): ref #6866 showing footnotes in specimen page
Andreas Kohlbecker
09:14 AM Revision ac54d579 (cdm-dataportal): ref #7599 ref #6866 replacing _add_js_derivation_tree_focus_u...
Andreas Kohlbecker
09:06 AM Revision 8bc06094 (cdm-dataportal): ref #7599 ref #6866 refactoring derivatin tree composition in...
Andreas Kohlbecker

03/22/2021

05:02 PM Revision 70842e94 (cdm-dataportal): ref #7599 ref #6866 derivation tree optionally without conten...
Andreas Kohlbecker
04:19 PM Revision 06b57a6a (taxeditor): revert changes in TaxonNodeDto
Katja Luther
03:58 PM Revision 48b3aa4e (cdm-dataportal): ref #7599 removing unused code
Andreas Kohlbecker
03:57 PM Revision a1dab23f (cdm-dataportal): ref #7599 ref #6866 individual font size per application
Andreas Kohlbecker
03:53 PM Revision f6ff2764 (cdm-dataportal): ref #6866 using details grid for specimen page
Andreas Kohlbecker
03:52 PM Revision 863bbef2 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - generalizing de...
Andreas Kohlbecker
03:11 PM Revision 3b495a18 (cdmlib): revert changes in TaxonNodeDto
Katja Luther
02:38 PM bug #9543 (New): Revise, harmonize media list in SpecimenOrObservationBaseDTO vs. DerivedUnitFaca...
`DerivedUnitFacade.getMediaTextData()` is being used to provide the media lists for the `DerivedUnit` and `FieldUnit`... Andreas Kohlbecker
02:06 PM Revision 91004c5d (cdm-dataportal): ref #6866 cleaning up
Andreas Kohlbecker
02:01 PM Revision 54456aee (cdm-dataportal): ref #7599 ref #6866 specimen details tables - testing two mor...
Andreas Kohlbecker
01:53 PM Revision 2c0778b3 (cdm-dataportal): clean up
Andreas Kohlbecker
01:10 PM Revision 757c4989 (cdmlib): cleanup
Andreas Müller
12:56 PM Revision de8b9705 (cdmlib): ref #9327 , ref #9211 adapt some classpaths for webservice and BeanIn...
Andreas Müller
11:31 AM bug #9504: Changing term tree title is not persisted
Not sure if this is fast but I could imagine that it is. Andreas Müller
10:46 AM bug #9542: Bulk Editor search does not work after opening a name out of the bulk editor
I guess this is for reveiew Andreas Müller
10:40 AM bug #9542 (Resolved): Bulk Editor search does not work after opening a name out of the bulk editor
Applied in changeset commit:taxeditor|e2d8b4196539aeb0c3e1a587026ca46ce1f1034a. Katja Luther
08:19 AM bug #9542 (Closed): Bulk Editor search does not work after opening a name out of the bulk editor
mail WHB:
Noch eine Auffälligkeit. Neoporteria planiceps ist (als Name) vorhanden.

Im Bulk Editor wird er abe...
Katja Luther
10:41 AM Revision e2d8b419 (taxeditor): fix #9542: after calling bulk editor out of the search view, it sh...
Katja Luther
10:41 AM Revision 3767457b (taxeditor): fix #8968: move created by column
Katja Luther
10:40 AM feature request #8968 (Resolved): filter Bulk editor for created by
Applied in changeset commit:taxeditor|3767457b3f1509b425d264ef930d384d9126a0d8. Katja Luther
 

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