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From 03/01/2021 to 03/30/2021

03/30/2021

11:54 PM Revision 0e43cf40 (cdmlib): fix #9571 some more documentation
Andreas Müller
11:51 PM Revision 1b04f305 (cdmlib): fix #9571 fix tests in persistence and service
Andreas Müller
11:39 PM Revision 57562b06 (cdmlib): fix tests for now more specific cache strategy
Andreas Müller
11:38 PM Revision f56a9bfd (cdmlib): cleanup
Andreas Müller
11:38 PM Revision 178b6ca0 (cdmlib): fix #9571 also allow new formatting for databases and maps
Andreas Müller
11:02 PM feature request #9571: Improve sec-formatting for taxa with webpage secundum
this should be fixed, can you please review Andreas Müller
11:01 PM feature request #9571 (Resolved): Improve sec-formatting for taxa with webpage secundum
Applied in changeset commit:cdmlib|6202dea80501881fb388073b428c15c4c0fc255b. Andreas Müller
10:48 PM feature request #9571 (Closed): Improve sec-formatting for taxa with webpage secundum
WGB:
mir ist gerade aufgefallen, dass es wohl keine solche Short-Citation (anlaog zu Autor-Nachname oder Teamnachn...
Andreas Müller
11:01 PM Revision f21ad31e (cdmlib): rename ref=>sec
Andreas Müller
11:00 PM Revision be1d4d1a (cdmlib): add short specific test
Andreas Müller
11:00 PM Revision 6202dea8 (cdmlib): fix #9571 improve sec-formatting for taxa with webpage secundum
Andreas Müller
10:58 PM Revision aa7def03 (cdmlib): cleanup
Andreas Müller
09:25 PM Revision 9cb2b967 (cdmlib): fix #9570 cleanup
Andreas Müller
09:21 PM Revision f1aa9b21 (cdmlib): fix #9570 use name cache strategy for tagged text creation
Andreas Müller
09:06 PM feature request #9570: Use tagged text for NameTypeDesginations name part
Please review. If anything doesn't work as expected please add test to newly created test class. Andreas Müller
09:02 PM feature request #9570 (Resolved): Use tagged text for NameTypeDesginations name part
Applied in changeset commit:cdmlib|fe3e32ab2e841cc1ca2fbec4734e32e0ee8c52f4. Andreas Müller
09:01 PM feature request #9570 (Closed): Use tagged text for NameTypeDesginations name part
... and prepare for tagged text for other type designation categories Andreas Müller
09:02 PM Revision fe3e32ab (cdmlib): fix #9570 fix tagged text for NameTypeDesignation
Andreas Müller
08:58 PM Revision 26f46592 (cdmlib): cleanup
Andreas Müller
07:40 PM Revision c441f66b (cdmlib): ref #9567 adapt javadoc
Andreas Müller
03:00 PM feature request #9544 (Resolved): In bulkeditor the strings should be copyable
Andreas Müller
02:27 PM task #9569 (New): Delete taxon and delete name should use the same UI and same semantics for dele...
Currently the delete name configurator for deleting taxa and names differ currently. E.g. the delete type designation... Andreas Müller
02:13 PM bug #9531 (Feedback): Add Names in OriginalSpelling to the delete configuration
In the error message we should use "... original spelling" , not camel case.
Except for this the ticket can be clo...
Andreas Müller
01:45 PM bug #9562 (Closed): Publish flag of field units and derived units are not handled correctly
This seems to work Andreas Müller
01:40 PM bug #9533 (Closed): NPE when reusing name for new taxon
This seems to work now Andreas Müller
01:32 PM feature request #9540: Handle classification source as source in TaxEditor
I guess this is fast as it is mostly c&p from other single sources Andreas Müller
01:29 PM feature request #9328 (Closed): Adapt Editor to switch to originalSource for taxon secundum
Works as expected. Andreas Müller
01:26 PM bug #9504: Changing term tree title is not persisted
By the way, it would good to use an underscore before the default title like "_New feature tree". Also having the foc... Andreas Müller
01:25 PM bug #9504 (Feedback): Changing term tree title is not persisted
This still does not work Andreas Müller
01:18 PM feature request #9545 (Closed): Remove "External Link type" completely
Andreas Müller
01:03 PM feature request #9549 (Feedback): Reduce visible fields for nomenclatural source and secundum sou...
This works. Only there is much space between "detail" and "Links" (for secundum reference) and between "details" and ... Andreas Müller
12:37 PM task #9567 (Resolved): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
The mentioned issues should be fixed.
Maybe you can still add some tests for HomotypicGroupNameComparator which ex...
Andreas Müller
12:27 PM task #9567 (Feedback): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
I fixed the potetial NPE and adapted the compare to include hybrid sign if names do not differ in any other part. Andreas Müller
12:23 PM task #9567 (Resolved): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Applied in changeset commit:cdmlib|e0c610f10302b0c755f509a33bd3df645077ea69. Andreas Müller
11:42 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
I would add another comparison if the first two comparisons return 0 to compare the not normalized titleCache, do you... Katja Luther
11:24 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > In handleSameBasionym a return was missi...
Katja Luther
10:36 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Andreas Müller wrote:
> Katja Luther wrote:
> > In handleSameBasionym a return was missing. After fixing that the r...
Katja Luther
10:11 AM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Katja Luther wrote:
> In handleSameBasionym a return was missing. After fixing that the result is correct.
> But ma...
Andreas Müller
08:46 AM task #9567 (Feedback): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
In handleSameBasionym a return was missing. After fixing that the result is correct.
But maybe the NPE should be avo...
Katja Luther
12:29 PM Revision c5bd49b5 (cdmlib): ref #9567 slightly adapt the last fix
Andreas Müller
12:23 PM Revision e0c610f1 (cdmlib): fix #9567 fix missing defined order if names differ only in hybrid sign
Andreas Müller
12:13 PM Revision 7555e895 (cdmlib): ref #9567 fix potential NPE in TaxonComparator if used in HomotypicGr...
Andreas Müller
11:53 AM bug #9566 (Closed): Handle nomenclatural standing correctly in cdmlight / sorting algorithms
this works now as expected, also for the homotypic groups in editor. Katja Luther
11:53 AM bug #9441 (Closed): Move names with invalid designation name relationships to the end in taxon co...
this works now as expected, also for the homotypic groups in editor. Katja Luther
10:28 AM bug #9568 (Closed): TypeSpecimenEditor: Selection of a reference of an typified image
Vaadin TypeSpecimenEditor (Test as well as production):
With change of the typification reference with preselected...
Wolf-Henning Kusber
08:37 AM Revision ee68d8ba (cdmlib): ref #9567: fix handleSameBasionym comparison
Katja Luther

03/29/2021

09:15 PM bug #9566 (Resolved): Handle nomenclatural standing correctly in cdmlight / sorting algorithms
Please review. Andreas Müller
06:58 PM bug #9566 (Closed): Handle nomenclatural standing correctly in cdmlight / sorting algorithms
This includes using the correct symbol whenenver a "name" is a designation only.
And sorting designations to the e...
Andreas Müller
09:13 PM task #9567: Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
please review Andreas Müller
08:46 PM task #9567 (Resolved): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Applied in changeset commit:cdmlib|8432293fbc9496c0b4c50bda3516ef9e0ac3b984. Andreas Müller
08:46 PM task #9567 (Closed): Unify HomotypicGroupTaxonComparator and HomotypicGroupNameComparator
Both classes have mostly the same code so they are very redundant. HGNameComparator seems to be an adapted copy of HG... Andreas Müller
08:46 PM Revision 8432293f (cdmlib): fix #9567 unify HomotypicGroupTaxonComparator and HomotypicGroupNameC...
Andreas Müller
08:44 PM Revision 882b5f7f (cdmlib): cleanup
Andreas Müller
07:44 PM Revision b9806393 (cdmlib): ref #9566 use nomenclatural standing also for name ordering with Homo...
Andreas Müller
07:43 PM Revision 0dbab4a2 (cdmlib): ref #9566 use invalid designation symbol for all names with nomenclat...
Andreas Müller
07:30 PM Revision 37f45eff (cdmlib): ref #9566 use nomenclatural standing for taxon ordering
Andreas Müller
07:25 PM Revision 035e8577 (cdmlib): cleanup
Andreas Müller
06:49 PM feature request #9561: In name and taxon search if titleCache is protected the search should run ...
I adapted the search. Can you please test again. I havn't tested yet in TaxEditor, only in test class (see code). Andreas Müller
06:45 PM feature request #9561 (Resolved): In name and taxon search if titleCache is protected the search ...
Applied in changeset commit:cdmlib|571eb9f1582883152db414442c0f878d7925280b. Andreas Müller
10:50 AM feature request #9561: In name and taxon search if titleCache is protected the search should run ...
Yes, I also thought about this but did not implement it such as I did not want to have all the subspecies in the resu... Andreas Müller
10:39 AM feature request #9561 (Feedback): In name and taxon search if titleCache is protected the search ...
It works as expected, but searching without authors for a titlecache with authors does not match. Maybe we should add... Katja Luther
06:45 PM Revision 571eb9f1 (cdmlib): fix #9561 make protectedTitleCache search a search with MatchMode.Be...
Andreas Müller
06:45 PM Revision b634cc70 (cdmlib): cleanup
Andreas Müller
12:52 PM Revision dbe61bd9 (cdm-dataportal): ref #7599 ref #6866 fixing layout problem in typedesignations...
Andreas Kohlbecker
11:55 AM Revision 5fd82374 (cdmlib): ref #9555 IEnumTerms with uuid in json
Andreas Kohlbecker
11:55 AM Revision 277bccd4 (cdm-dataportal): ref #9555 derived unit tree headers with symbols for record base
Andreas Kohlbecker
11:06 AM feature request #8968 (Closed): filter Bulk editor for created by
created by moved, close this ticket. Katja Luther
10:53 AM bug #9533 (Resolved): NPE when reusing name for new taxon
Andreas Müller wrote:
> Andreas Müller wrote:
> > When deleting the selected name again I now get another NPE:
>
...
Katja Luther
10:46 AM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
I removed that the derivatives are added to the fieldUnitDto in loadFieldUnitDto(). Katja Luther
10:45 AM Revision 5446c6d5 (cdmlib): ref #9556: remove derivates from fieldUnitDto in loadFieldUnitDto
Katja Luther
10:42 AM task #9558 (Closed): General tests for cdmlight export
Looks fine. Katja Luther
10:16 AM Revision 61f058d5 (cdmlib): adapt symbol for misspellings
Katja Luther
08:38 AM bug #9565 (New): revise name render templates selection strategy
in the flora of cuba the syn-sec. references are expected to be shown:
http://portal.cybertaxonomy.org/flora-cuba/...
Andreas Kohlbecker
07:36 AM Revision 2088cb30 (cdmlib): adapt NomenclaturalStatus String in CdmLight
Katja Luther

03/26/2021

04:54 PM Revision 82772845 (cdm-dataportal): ref #6866 removing solved TODO comments
Andreas Kohlbecker
04:52 PM Revision 39f88620 (cdmlib): ref #9563 TODO comment
Andreas Kohlbecker
04:51 PM Revision 99a137ea (cdm-dataportal): ref #6866 no hover effect of derivate tree headers on specime...
Andreas Kohlbecker
04:23 PM task #9564 (New): synonymy: suppress output of sec references if it is equal with the accepted ta...
"Da wäre die Möglichkeit interessant, nur die sec.Refs. anzuzeigen, die NICHT die gleiche sec.-Ref. haben, die also d... Andreas Kohlbecker
04:19 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
so we should modify this service method so that it no longer add the derivatives or is there an alternative service m... Andreas Kohlbecker
04:07 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
Andreas Kohlbecker wrote:
> reopening this issue since `loadFieldUnitDTO()` is being used in the Taxeditor
>
> @K...
Katja Luther
03:57 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
DerivedUnitFacadeController.doGetFieldObjectMediaDTO() is no longer using loadFieldUnitDTO see commit:3309605f
there...
Andreas Kohlbecker
02:32 PM bug #9556 (Feedback): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
reopening this issue since `loadFieldUnitDTO()` is being used in the Taxeditor
@Katja: are the derivatives of the ...
Andreas Kohlbecker
02:26 PM bug #9556 (Rejected): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
since the intermediate units are not used at all by consuming methods, they should be skipped completely.
Andreas Kohlbecker
12:16 PM bug #9556: occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
This method is kind of misused: After solving #9557 it is only being used by `.DerivedUnitFacadeController.doGetField... Andreas Kohlbecker
04:13 PM task #6208 (New): implement synonymy service responding with DTO
Andreas Müller
04:07 PM task #6208: implement synonymy service responding with DTO
I think we should reopen this ticket since we will be working on this this year Andreas Kohlbecker
04:10 PM bug #9562: Publish flag of field units and derived units are not handled correctly
this should be fixed. The problem was that the value for the publish checkbox was taken from DerivedUnitFace.isPublis... Katja Luther
04:07 PM bug #9562 (Resolved): Publish flag of field units and derived units are not handled correctly
Applied in changeset commit:taxeditor|6dd14e6fb067f81fb1deba7377d5bf81312a5991. Katja Luther
03:59 PM bug #9562 (Closed): Publish flag of field units and derived units are not handled correctly
when editing the field unit publish flag the publish flag of the derivate units are changed, too and/or not saved cor... Katja Luther
04:03 PM bug #9563 (New): MediaDTO factory method supports media representation preferences
see comment in code:
~~~java
/**
* Creates a list of DTOs from the Media entity.
* For each Medi...
Andreas Kohlbecker
04:01 PM Revision 6dd14e6f (taxeditor): fix #9562: getting the correct value for publish flag of field uni...
Katja Luther
03:55 PM Revision 3309605f (cdmlib): ref #9556 DerivedUnitFacadeController.doGetFieldObjectMediaDTO() is n...
Andreas Kohlbecker
03:51 PM Revision 39a46fb7 (cdm-dataportal): ref #9557 using new findRootUnitDTOs serivice in dataportal
Andreas Kohlbecker
02:00 PM bug #9559: OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpublished units
Andreas Kohlbecker wrote:
> The priority of this ticket depends on the question if there are projects with units whi...
Andreas Müller
01:57 PM bug #9559 (New): OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpublishe...
I think this ticket should be checked against #8424 and #4484 if they are duplicates of each other Andreas Müller
11:12 AM bug #9559 (Feedback): OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpub...

The priority of this ticket depends on the question if there are projects with units which must be undisclosed and ...
Andreas Kohlbecker
11:09 AM bug #9559 (New): OccurrenceServiceImpl.findRootUnitDTOs() and related methods suppress unpublishe...
All methods in OccurrenceServiceImpl which deliver units for the data portal via web services need to filter out unpu... Andreas Kohlbecker
01:54 PM feature request #9561: In name and taxon search if titleCache is protected the search should run ...
Please review Andreas Müller
12:08 PM feature request #9561 (Resolved): In name and taxon search if titleCache is protected the search ...
Applied in changeset commit:cdmlib|9bf89673c622c6823cefe921429b1f2438dc3c0a. Andreas Müller
12:06 PM feature request #9561 (Closed): In name and taxon search if titleCache is protected the search sh...
... otherwise users may think the name does not exist yet if the nameCache is not filled correctly.
Currently name...
Andreas Müller
12:46 PM Revision 6656176a (taxeditor): rename detailsview classes from feature -> term - continue
Katja Luther
12:45 PM Revision cef1d6a8 (taxeditor): rename detailsview classes from feature -> term
Katja Luther
12:38 PM Revision 58bf9462 (taxeditor): ref #9504: handle changes of title
Katja Luther
12:38 PM bug #9504 (Resolved): Changing term tree title is not persisted
this is fixed Katja Luther
12:33 PM Revision 0899d61e (taxeditor): fix #9545: remove external link type
Katja Luther
12:25 PM Revision d1bb1fa2 (cdmlib): fix incorrect load method
Andreas Müller
12:07 PM Revision 9bf89673 (cdmlib): fix #9561 fix search searches on titleCache also if titleCache is pr...
Andreas Müller
12:00 PM bug #9557 (Closed): implement occurrence/{uuid}/rootUnitDTOs
Andreas Kohlbecker
10:39 AM bug #9557: implement occurrence/{uuid}/rootUnitDTOs
the web service `occurrence/{uuid}/rootUnitDTOs` and service method `OccurrenceServiceImpl.findRootUnitDTOs()` are mi... Andreas Kohlbecker
11:55 AM Revision 0299ccff (cdmlib): unsind session load instead of session refresh
Andreas Kohlbecker
11:52 AM Revision 29a1a72a (cdmlib): ref #9557 removing obsolete findFieldUnitDTO methods
Andreas Kohlbecker
11:52 AM Revision 32f049c7 (cdmlib): ref #9557 findRootUnitDTOs service and controller method
Andreas Kohlbecker
11:52 AM Revision b1859797 (cdmlib): ref #9557 renaming method to correct plural form
Andreas Kohlbecker
11:48 AM feature request #9544: In bulkeditor the strings should be copyable
this is implemented, please review. Katja Luther
11:48 AM Revision f8757840 (taxeditor): ref #9544: all elements of bulkeditor should be copyable
Katja Luther
10:15 AM Revision 901b167b (cdmlib): unignore not-failing test
Andreas Müller
10:15 AM Revision 22b93d67 (cdmlib): cleanup
Andreas Müller
10:08 AM Revision 3470949e (taxeditor): fix #9545: remove external link type
Katja Luther
10:08 AM feature request #9545: Remove "External Link type" completely
please review Katja Luther
10:08 AM feature request #9545 (Resolved): Remove "External Link type" completely
Applied in changeset commit:taxeditor|3470949e9aa012a03d23c1b0e44603ed698ee056. Katja Luther
10:00 AM feature request #9328 (Resolved): Adapt Editor to switch to originalSource for taxon secundum
this is implemented, please review. Katja Luther
09:59 AM feature request #9549 (Resolved): Reduce visible fields for nomenclatural source and secundum sou...
this is fixed, please review. Katja Luther
09:56 AM Revision 3bdbeb62 (cdmlib): cleanup
Andreas Müller
09:40 AM Revision befe05b3 (cdmlib): ref #9558 adapt test data after full sample import test to run in suite
Andreas Müller
09:21 AM Revision 0e7b64fb (taxeditor): ref #9549: adapt editor to secundum as originalsource and remove u...
Katja Luther

03/25/2021

11:33 PM Revision 157fcc13 (cdmlib): ref #9558 exception, error and warning test and full data sample tes...
Andreas Müller
11:32 PM task #9558 (Resolved): General tests for cdmlight export
This is fixed. Please review. Andreas Müller
11:31 PM task #9558 (Closed): General tests for cdmlight export
all tests for cdmlight export should include an exception, error and warning test.
Also a fullDataSample (FullCove...
Andreas Müller
11:27 PM Revision 5782e289 (cdmlib): add hermaphrodite to test terms
Andreas Müller
11:06 PM Revision 1be54c81 (cdmlib): add hostplant to test terms
Andreas Müller
05:54 PM bug #9557 (Closed): implement occurrence/{uuid}/rootUnitDTOs
see http://int.e-taxonomy.eu/cdmserver/integration_reference/occurrence/8259122c-7140-44f3-980e-1a6506ce8f50/fieldUni... Andreas Kohlbecker
05:52 PM bug #9556 (Closed): occurrence/{uuid}/fieldUnitDTOs web service adds duplicate units to response
see http://localhost:8080/occurrence/8585081c-b73b-440b-b349-582845cf3fb4/fieldUnitDTOs.json
the response data ma...
Andreas Kohlbecker
05:22 PM bug #9555 (Closed): symbols for record basis (and kind of unit) in derivation tree
show symbols with the units-header per record basis and kind of unit if needed
A quickly assembled list:
**reco...
Andreas Kohlbecker
04:03 PM feature request #9554 (New): option to suppress type designations in portal
in the http://portal.cybertaxonomy.org/flora-cuba/ typedesignations are just hidden per css. The related footnotes ar... Andreas Kohlbecker
04:01 PM bug #9553: Synonymy is missing in table of content
The same is true for Polyt. Keys Walter Berendsohn
03:50 PM bug #9553 (New): Synonymy is missing in table of content
Configuration:
* Tabless Taxon page
* Synonym as separate tab
==> the synonymy is missing in the TOC
htt...
Andreas Kohlbecker
01:09 PM bug #9550 (Closed): Recognize PhytoKeys and PLoS ONE in name parser
Test run as expected. Andreas Müller
01:04 PM Revision 3dde5e8a (cdmlib): ref #9550 fixing title in test
Andreas Müller
12:48 PM feature request #9552: Add e-article number to Reference
ERS:
... und so etwas ist auch nicht parsable (fascicle > 4 Zeichen): Lepyrodiclis alinihatii Menemen & al. in Nor...
Andreas Müller
09:38 AM feature request #9552 (New): Add e-article number to Reference
Journals publishing online have started giving numbers for there electronically published articles which seem to have... Andreas Müller
12:40 PM Revision bf382cb7 (cdmlib): ref #9550 add PLoS ONE to the explicit journal title list
Andreas Müller
10:47 AM Revision 31f131cb (cdmlib): cleanup
Andreas Müller
10:47 AM Revision 7b166086 (cdmlib): implement user friendly class name without camel case
Andreas Müller
01:19 AM Revision 940e1f09 (taxeditor): cleanup
Andreas Müller

03/24/2021

09:58 PM task #9014 (In Progress): Unparsable name strings
Andreas Müller
05:47 PM Revision eb6207d9 (cdmlib): adding NamedSource.citation to json configuration
Andreas Kohlbecker
05:45 PM Revision f4fce2b7 (cdmlib): cleanup
Andreas Müller
05:44 PM Revision a5a174a8 (cdmlib): cleanup
Andreas Müller
04:45 PM bug #9551 (Resolved): Recognize "series" in article parsing
Applied in changeset commit:cdmlib|d9aa603aade3ded73eedd57d346e478e820073a4. Andreas Müller
04:16 PM bug #9551 (Resolved): Recognize "series" in article parsing
... maybe also books etc. Andreas Müller
04:45 PM Revision 8e78f363 (cdmlib): cleanup
Andreas Müller
04:44 PM Revision d9aa603a (cdmlib): fix #9551 and #9550 seriesPart parsing for articles (and books?) and...
Andreas Müller
02:47 PM Revision 2f5cf318 (cdm-dataportal): ref #9332 adapting portal to model type designation property ...
Andreas Kohlbecker
02:45 PM Revision 63367139 (cdmlib): ref #9332 adapting DTO to property change source -> designationSource
Andreas Kohlbecker
02:45 PM Revision 2f206257 (cdmlib): ref #9332 adapting further init strategies
Andreas Kohlbecker
02:36 PM Revision 843dce37 (taxeditor): fix fragment.e4xmi after renaming of termtree
Katja Luther
02:20 PM bug #9550 (Resolved): Recognize PhytoKeys and PLoS ONE in name parser
Applied in changeset commit:cdmlib|a119dab72f372797dc5e8afd8f34c53baa3e7440. Andreas Müller
02:19 PM bug #9550 (Closed): Recognize PhytoKeys and PLoS ONE in name parser
e.g. Pseudopodospermum baeticum (DC.) Zaika & al. in PhytoKeys 137: 68. 2020 Andreas Müller
02:20 PM Revision a119dab7 (cdmlib): fix #9550 , ref #9014 include PhytoKeys in name parser
Andreas Müller
12:47 PM Revision 805f62dc (cdmlib): cleanup
Andreas Müller
11:25 AM feature request #8920: Make reference URL available in details view
WGB:
Erstmal zum Direktlink zur Literatur-URL aus dem Details-VIew – fände ich wirklich toll (siehe ganz unten), d...
Andreas Müller
11:22 AM Revision d7849510 (cdmlib): ref #9332 adapting initstrategy
Andreas Kohlbecker
11:19 AM feature request #9549: Reduce visible fields for nomenclatural source and secundum source in TaxE...
WGB:
Wenn Ihr an dieser Stelle schon am Arbeiten seid: Nochmal zum neuen Dialog, mit dem ich gar nicht glücklich b...
Andreas Müller
11:15 AM feature request #9549 (Closed): Reduce visible fields for nomenclatural source and secundum sourc...
Currently it shows the fields "type" and "description" for links and "original information", "idNamespace" and "idInS... Andreas Müller
11:03 AM feature request #9548 (New): Handle links to websites, webapps or similar in image galleries (sim...
Sometimes users use links to websites within an image gallery. These usually are identified by mime type "text/html",... Andreas Müller
10:59 AM feature request #9547 (New): Show warning in TaxEditor if a MediaRepresentation can not be shown ...
Sometimes users use links to websites within an image gallery. These usually are identified mime type "text/html" or ... Andreas Müller
10:51 AM feature request #9067 (Closed): [DISCUSS] Allow media to support external links not being files
Andreas Kohlbecker wrote:
> I actually see no benefit of the "solutions" 2 - 4 over 1.
>
> Adding additional fiel...
Andreas Müller
10:45 AM Revision 61b2cc21 (cdmlib): ref #6866 fixing bug in DeterminationEventDTO
Andreas Kohlbecker
10:45 AM Revision 4d7ab017 (cdmlib): ref #6866 pulling determinedNames up to SpecimenOrObservationDTO
Andreas Kohlbecker
10:45 AM Revision 324aac32 (cdmlib): ref #6866 extending init strategy for sources
Andreas Kohlbecker
10:45 AM Revision d1210556 (cdmlib): ref #6866 SpecimenOrObservationBaseDTO with DeterminationEventDTOs
Andreas Kohlbecker
10:43 AM feature request #9546 (New): [DISCUSS] Merge ExternalLink and MediaRepresentation
... once MediaRepresentation has been merged with MediaRepresentationPart
Both classes store common information li...
Andreas Müller
10:30 AM Revision 42c6fd16 (cdm-dataportal): ref #7599 ref #6866 fixing more bugs in determinations display
Andreas Kohlbecker
10:24 AM feature request #9296: Preference to show/not show infrageneric epithet for species
NK:
zufällig bin ich nun wieder auf den Hintergrund in der Botanik gestoßen:
Code, https://www.iapt-taxon.org/n...
Andreas Müller
10:01 AM feature request #9545 (Closed): Remove "External Link type" completely
There is no real need for the ExternalLink.type attribute as today browsers all know how to open e.g. pdf. This was a... Andreas Müller
09:52 AM bug #9538 (Closed): Changing accepted to synonym closes name editor tab even if canceled
I also can't reproduce anymore. So I close and reopen if it appears again. Andreas Müller
08:36 AM bug #9538 (Resolved): Changing accepted to synonym closes name editor tab even if canceled
I can't reproduce this exception, also on nightly version. Maybe there was a state where the exception appeared. Katja Luther
09:28 AM Revision ac730eca (taxeditor): cleanup
Andreas Müller
09:20 AM bug #9542 (Closed): Bulk Editor search does not work after opening a name out of the bulk editor
Works as expected and code looks reasonable. Andreas Müller

03/23/2021

10:36 PM Revision 2316d086 (cdm-dataportal): ref #7599 ref #6866 fixing bug in determinations display#
Andreas Kohlbecker
10:24 PM Revision 38a98e54 (cdm-dataportal): ref #6866 showing unit annotations (AnnotationsAndSources sup...
Andreas Kohlbecker
06:17 PM Revision 648b078c (cdm-dataportal): ref #6866 fixing buf in source loading and adapting test
Andreas Kohlbecker
05:46 PM Revision 8c24201a (cdm-dataportal): ref #7599 ref #6866 adapting tests to latest changes
Andreas Kohlbecker
05:45 PM Revision b56eba84 (cdm-dataportal): ref #6866 adding missing class
Andreas Kohlbecker
05:36 PM Revision 8571d50c (cdm-dataportal): ref #6866 more determination details
Andreas Kohlbecker
04:10 PM Revision 9eeb624f (cdm-dataportal): ref #6866 adding markers to specimen page
Andreas Kohlbecker
03:58 PM Revision 8b3aa5d4 (cdm-dataportal): removing theme function for markers
Andreas Kohlbecker
02:45 PM Revision c1bf88ee (cdm-dataportal): ref #6866 display of sources
Andreas Kohlbecker
01:43 PM feature request #9544: In bulkeditor the strings should be copyable
I guess this is fast to implement. If not, remove the tag. Andreas Müller
11:54 AM feature request #9544 (Closed): In bulkeditor the strings should be copyable
The user should be able to copy out of all columns in bulkeditor. Katja Luther
11:01 AM Revision d4066259 (taxeditor): cleanup and subtasks for referencing objects progress monitor
Andreas Müller
10:46 AM Revision 69e39ae0 (taxeditor): ref #7311: keep drop down open and adapt filter
Katja Luther
09:47 AM Revision fc0d671e (taxeditor): ref #6229: fix problems with multilanguage support and title gener...
Katja Luther
09:25 AM Revision 8b647486 (cdm-dataportal): ref #6866 showing footnotes in specimen page
Andreas Kohlbecker
09:14 AM Revision ac54d579 (cdm-dataportal): ref #7599 ref #6866 replacing _add_js_derivation_tree_focus_u...
Andreas Kohlbecker
09:06 AM Revision 8bc06094 (cdm-dataportal): ref #7599 ref #6866 refactoring derivatin tree composition in...
Andreas Kohlbecker

03/22/2021

05:02 PM Revision 70842e94 (cdm-dataportal): ref #7599 ref #6866 derivation tree optionally without conten...
Andreas Kohlbecker
04:19 PM Revision 06b57a6a (taxeditor): revert changes in TaxonNodeDto
Katja Luther
03:58 PM Revision 48b3aa4e (cdm-dataportal): ref #7599 removing unused code
Andreas Kohlbecker
03:57 PM Revision a1dab23f (cdm-dataportal): ref #7599 ref #6866 individual font size per application
Andreas Kohlbecker
03:53 PM Revision f6ff2764 (cdm-dataportal): ref #6866 using details grid for specimen page
Andreas Kohlbecker
03:52 PM Revision 863bbef2 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - generalizing de...
Andreas Kohlbecker
03:11 PM Revision 3b495a18 (cdmlib): revert changes in TaxonNodeDto
Katja Luther
02:38 PM bug #9543 (New): Revise, harmonize media list in SpecimenOrObservationBaseDTO vs. DerivedUnitFaca...
`DerivedUnitFacade.getMediaTextData()` is being used to provide the media lists for the `DerivedUnit` and `FieldUnit`... Andreas Kohlbecker
02:06 PM Revision 91004c5d (cdm-dataportal): ref #6866 cleaning up
Andreas Kohlbecker
02:01 PM Revision 54456aee (cdm-dataportal): ref #7599 ref #6866 specimen details tables - testing two mor...
Andreas Kohlbecker
01:53 PM Revision 2c0778b3 (cdm-dataportal): clean up
Andreas Kohlbecker
01:10 PM Revision 757c4989 (cdmlib): cleanup
Andreas Müller
12:56 PM Revision de8b9705 (cdmlib): ref #9327 , ref #9211 adapt some classpaths for webservice and BeanIn...
Andreas Müller
11:31 AM bug #9504: Changing term tree title is not persisted
Not sure if this is fast but I could imagine that it is. Andreas Müller
10:46 AM bug #9542: Bulk Editor search does not work after opening a name out of the bulk editor
I guess this is for reveiew Andreas Müller
10:40 AM bug #9542 (Resolved): Bulk Editor search does not work after opening a name out of the bulk editor
Applied in changeset commit:taxeditor|e2d8b4196539aeb0c3e1a587026ca46ce1f1034a. Katja Luther
08:19 AM bug #9542 (Closed): Bulk Editor search does not work after opening a name out of the bulk editor
mail WHB:
Noch eine Auffälligkeit. Neoporteria planiceps ist (als Name) vorhanden.

Im Bulk Editor wird er abe...
Katja Luther
10:41 AM Revision e2d8b419 (taxeditor): fix #9542: after calling bulk editor out of the search view, it sh...
Katja Luther
10:41 AM Revision 3767457b (taxeditor): fix #8968: move created by column
Katja Luther
10:40 AM feature request #8968 (Resolved): filter Bulk editor for created by
Applied in changeset commit:taxeditor|3767457b3f1509b425d264ef930d384d9126a0d8. Katja Luther

03/20/2021

01:10 AM Revision 45dd6d2f (cdmlib): toString for KeyPref
Andreas Müller

03/19/2021

10:38 PM Revision dc813226 (cdmlib): minor
Andreas Müller
09:07 PM Revision b01e3f90 (cdmlib): ref #9541 utitlity method for KeyStatement
Andreas Müller
09:07 PM Revision 844e6554 (cdmlib): ref #9541 improve handling for description main objects
Andreas Müller
09:02 PM feature request #9541 (Resolved): Improve referencing objects handling
* DescriptionElementSource, SecundumSource and NomenclaturalStatus do now have a backlink to their referencing main o... Andreas Müller
07:39 PM Revision 8cc8dda8 (cdmlib): ref #9523 fix potential NPE in homotypicGroupDto calling
Andreas Müller
07:36 PM Revision 3399c2a2 (cdmlib): cleanup
Andreas Müller
07:10 PM Revision 2e0c302b (cdm-dataportal): ref #7599 ref #6866 specimen details tables - more tests also...
Andreas Kohlbecker
06:15 PM feature request #9331: Distinguish DescriptionElementSource and NamedSource
This is generally solved and update script works now. The new class structure is now
~~~
OriginalSorceBase
|- Na...
Andreas Müller
06:10 PM feature request #8761 (Closed): Remove TaxonName_NomenclaturalStatus MN table
This works. The MN table is not touched anymore when data is edited. Andreas Müller
06:08 PM Revision 69382db8 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - re-enabling all...
Andreas Kohlbecker
05:47 PM Revision 4cce7202 (taxeditor): ref #9331 further taxeditor adaptations to NamedSourceBase (cont.)
Andreas Müller
05:41 PM Revision 4ecf75f8 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - adapting tests
Andreas Kohlbecker
04:41 PM Revision ceec0175 (taxeditor): ref #9331 further taxeditor adaptations to NamedSourceBase
Andreas Müller
04:40 PM Revision 8053cf5a (taxeditor): cleanup
Andreas Müller
04:27 PM Revision 22296415 (taxeditor): cleanup
Andreas Müller
04:27 PM Revision 369110a3 (taxeditor): ref #9331 fix CCE in NomenclaturalSourceElement
Andreas Müller
04:13 PM feature request #9211 (Closed): Handle source(s) for Classification
Update script worked correctly. I close this ticket. Followup ticket for TaxEditor exists. For dataportal probably no... Andreas Müller
04:07 PM feature request #9540 (New): Handle classification source as source in TaxEditor
WIth #9211 the reference for classification became a single source. The classification wizard should be adapted accor... Andreas Müller
04:02 PM task #9315 (Closed): Remove old single source citation and microCitation columns
All columns were correctly removed on test Andreas Müller
03:55 PM feature request #9327 (Closed): Make taxon secundum reference an original source
Closing this ticket as update script worked successfully on test server. Followup tickets for dataportal and taxedito... Andreas Müller
03:46 PM feature request #9332 (Closed): Rename TypeDesignationBase.source to .designationSource
Andreas Müller
03:39 PM feature request #9507: Add ratioTo structure to Character
AM:
ratioTo ist modellseitig jetzt implementiert und muss nur noch im TaxEditor zur Verfügung gestellt werden.
...
Andreas Müller
03:32 PM feature request #9507 (Closed): Add ratioTo structure to Character
Andreas Müller
03:25 PM task #9330 (Closed): Remove "NomenclaturalSource" from OriginalSourceType
Andreas Müller
03:20 PM feature request #8876 (Rejected): nom. & gen. cons.
AM:
Allerdings frage ich mich gerade, ob der neue Status wirklich „nom. & gen. cons.“ oder nur „gen. cons.“ heißen...
Andreas Müller
03:07 PM Revision 90db824b (taxeditor): temporarily ignore swap test
Andreas Müller
03:04 PM Revision 6f8a50cf (taxeditor): cleanup
Andreas Müller
02:57 PM Revision dd6b7a1e (cdmlib-apps): ref #9332 adapt PhycobankHigherClassificationExcelImport to desi...
Andreas Müller
02:21 PM bug #9538 (Feedback): Changing accepted to synonym closes name editor tab even if canceled
I do now get:
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/remoting/classification...
Andreas Müller
12:23 PM bug #9538: Changing accepted to synonym closes name editor tab even if canceled
Moved the close right before the creation of the operation, so also cancel of sec handling wizard does not close the ... Katja Luther
12:21 PM bug #9538 (Resolved): Changing accepted to synonym closes name editor tab even if canceled
Applied in changeset commit:taxeditor|1103c727e0bcd2b58e88cfb536340490655d1429. Katja Luther
11:27 AM bug #9538 (Closed): Changing accepted to synonym closes name editor tab even if canceled
When calling accepted to synonym on a taxon opened in name editor the tab is closed before the dialogue to select the... Andreas Müller
02:19 PM Revision fdd6dc54 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - selenium elements
Andreas Kohlbecker
02:16 PM Revision 3af6face (cdm-vaadin): update vaadin test H2 for v5.22.0
Andreas Müller
02:14 PM Revision a840774a (taxeditor): update taxeditor test H2 for v5.22.0
Andreas Müller
02:14 PM Revision 0f9bc41f (taxeditor): fix #8761 adapt test data for handling TaxonName -> NomenclaturalS...
Andreas Müller
02:14 PM Revision 11e08c97 (taxeditor): ref #9330 adapt TaxEditor to removed NomenclaturalReference type
Andreas Müller
02:14 PM Revision 8ea93946 (taxeditor): ref #9332 adapt TaxEditor code to .designationSource
Andreas Müller
02:14 PM Revision b56c58c0 (taxeditor): cleanup
Andreas Müller
02:14 PM Revision 2f1f8d57 (taxeditor): ref #9330 adapt testdata to removed SEP in taxeditor
Andreas Müller
02:14 PM Revision fc853bb4 (taxeditor): ref 9327 adapt taxeditor to new secundum handling
Andreas Müller
02:05 PM Revision 03a81ce2 (cdmlib): update cached model to v 5.22.0
Andreas Müller
02:05 PM Revision 2c50b7cb (cdmlib): update test H2 vor v5.22.0
Andreas Müller
02:05 PM Revision b3e0fcf9 (cdmlib): ref #9322 fix the bug for deleting inverse representations in TermRem...
Andreas Müller
02:05 PM Revision a2893dc2 (cdmlib): cleanup
Andreas Müller
02:05 PM Revision a9a9d9f0 (cdmlib): cleanup and fix compile error related to ref #9515
Andreas Müller
02:05 PM Revision 8de9ac51 (cdmlib): cleanup
Andreas Müller
02:05 PM Revision 75a3cc51 (cdmlib): ref #9315 move remove unused columns to the start of update script
Andreas Müller
02:05 PM Revision 31c1b80e (cdmlib): ref #9515 rename state in SpecimenImportBase to individualsAssociatio...
Andreas Müller
02:05 PM Revision b915dafb (cdmlib): ref #9515 adding a break in the loop as we only search for the first ...
Andreas Müller
02:05 PM Revision 0ac8dc05 (cdmlib): cleanup
Andreas Müller
02:05 PM Revision e05f7e71 (cdmlib): ref #9211 fixing test related issues for Classification.source
Andreas Müller
02:05 PM Revision 366697b7 (cdmlib): cleanup
Andreas Müller
02:05 PM Revision a3c5177f (cdmlib): cleanup
Andreas Müller
02:05 PM Revision 8c9245ee (cdmlib): ref #9211 make Classification.reference a single source
Andreas Müller
02:05 PM Revision 40a76138 (cdmlib): ref #8761 fix correct handling of nomStatus setter
Andreas Müller
02:05 PM Revision 9e897cb2 (cdmlib): fix #8761 handle TaxonName -> NomenclaturalStatus link correctly
Andreas Müller
02:05 PM Revision bc96eea2 (cdmlib): cleanup
Andreas Müller
02:05 PM Revision de50b58b (cdmlib): ref #9331 improve deb handling in Cdm2CdmImportBase
Andreas Müller
02:05 PM Revision 66620566 (cdmlib): ref #9332 adapt TypeDesignationBaseBeanProcessor to designationSource...
Andreas Müller
02:05 PM Revision 7eef060a (cdmlib): cleanup
Andreas Müller
02:04 PM Revision 51dfa0e0 (cdmlib): ref #9332 adapt xml mapping to new designationSource
Andreas Müller
02:04 PM Revision 09716aa0 (cdmlib): cleanup
Andreas Müller
02:04 PM Revision 72cd6341 (cdmlib): ref #9332 adapt some test data and a query to new designationSource i...
Andreas Müller
02:04 PM Revision 0c155366 (cdmlib): ref #9330 adapt testdata to removed SEP in cdmlib
Andreas Müller
02:04 PM Revision ebe255f5 (cdmlib): ref #9332 adapt registration dao to designationSource renaming
Andreas Müller
02:04 PM Revision 623c5648 (cdmlib): ref #9330 adapt testdata to removed NOR in cdmlib
Andreas Müller
02:04 PM Revision 80639870 (cdmlib): cleanup
Andreas Müller
02:04 PM Revision 6a1c1f85 (cdmlib): ref #9507 update test database ref integrity
Andreas Müller
02:04 PM Revision 4d32881a (cdmlib): ref #9331 update test data for new DescriptionElementSource handling
Andreas Müller
02:04 PM Revision a862b070 (cdmlib): ref #9332 rename TypeDesignationBase.source to .designationSource in ...
Andreas Müller
02:04 PM Revision bfda481e (cdmlib): cleanup
Andreas Müller
02:04 PM Revision c97c2e65 (cdmlib): ref #9330 remove OriginalSourceType.nomenclaturalSource and secundumS...
Andreas Müller
02:04 PM Revision a75b95c2 (cdmlib): cleanup
Andreas Müller
02:04 PM Revision f70e3cdb (cdmlib): ref #9331 factory methods for NamedSource
Andreas Müller
02:04 PM Revision 77fa46a3 (cdmlib): ref #9331 correct modelling for DescElem to Source and update script ...
Andreas Müller
02:04 PM Revision 4329e9eb (cdmlib): ref #9331 some final changes in model for NamedSourceBase et al.
Andreas Müller
02:04 PM Revision 8ee4cd83 (cdmlib): make Cdm2CdmImportBase compiling again
Andreas Müller
02:04 PM Revision 19e3b618 (cdmlib): minor
Andreas Müller
02:04 PM Revision c3e0a69a (cdmlib): ref #9507 add ratioToStructure to test schema
Andreas Müller
02:04 PM Revision b6eee3e3 (cdmlib): cleanup
Andreas Müller
02:04 PM Revision b93258bd (cdmlib): ref #9331 add NamedSource and NamedSourceBase and use it, SecundumSou...
Andreas Müller
02:04 PM Revision bf4426c2 (cdmlib): ref #9331 remove generics from OriginalSourceBase
Andreas Müller
02:04 PM Revision 38c2d4fc (cdmlib): ref #9507 add ratioToStructure to Character
Andreas Müller
02:04 PM Revision eac155bd (cdmlib): change CDM version to 5.22.0
Andreas Müller
02:04 PM Revision b13c566d (cdmlib): ref #9327 fix update script for secundum handling and add data in Ful...
Andreas Müller
02:04 PM Revision f493d3ed (cdmlib): fix #9315 remove old single source columns via update script
Andreas Müller
02:04 PM Revision 4986aab4 (cdmlib): cleanup
Andreas Müller
02:04 PM Revision c8542c18 (cdmlib): ref #9327 update script updated and some further test and propertyPat...
Andreas Müller
02:04 PM Revision dbc89ca1 (cdmlib): ref #6696 remove getNextUpdater()
Andreas Müller
02:04 PM Revision 835db8f6 (cdmlib): cleanup
Andreas Müller
02:04 PM Revision f5cac6e5 (cdmlib): ref #9327 add erronously deleted line
Andreas Müller
02:04 PM Revision 3f3fefaa (cdmlib): ref #9327 remove saveNewTaxonNode()
Andreas Müller
02:01 PM Revision 0e7a0a0f (cdmlib): cleanup
Andreas Müller
02:01 PM Revision dda109c6 (cdmlib): ref #9327 fix tests in persistence and service layer
Andreas Müller
02:01 PM Revision 7288eb78 (cdmlib): cleanup
Andreas Müller
02:01 PM Revision d71868a2 (cdmlib): ref #9327 add sec source to TaxonBase (with few open issues)
Andreas Müller
02:01 PM Revision 46b6cd1f (cdmlib): cleanup
Andreas Müller
01:07 PM feature request #8968 (Feedback): filter Bulk editor for created by
Works as expected. I suggest to move the column before ID and UUID. But I am not sure. Generally the ticket can be cl... Andreas Müller
01:02 PM feature request #9515: Add DescriptionType to TaxonDescription of TaxonAssociations in ABCD import
I have renamed the method to set the description to the import state to get/setIndividualsAssociationDescriptionPerTa... Andreas Müller
12:56 PM feature request #9515 (Feedback): Add DescriptionType to TaxonDescription of TaxonAssociations in...
Have you tested with a real import that it works? Andreas Müller
12:42 PM feature request #9518 (Closed): Add symbol to descriptions having status individual association i...
Works as expected Andreas Müller
12:23 PM feature request #9079: Move supported and available for parts of feature detail element to sections
A similar availableFor section we will also have for Types like ExtensionType, AnnotationType, MarkerType and Identif... Andreas Müller
12:22 PM feature request #9539 (In Progress): Implement availableFor for ExtensionType, MarkerType, Annota...
Similar to Features #9027
We may need to decide for all existing Types what they should support by default. Also w...
Andreas Müller
12:16 PM Revision 1103c727 (taxeditor): fix #9538: name editor is only closed if change really takes place
Katja Luther
12:09 PM bug #6182 (Rejected): Emptying protolog URI does not work
As protologues are now handled as nomenclatural source external links this problem does not exist anymore. For extern... Andreas Müller
12:05 PM bug #6686: Correct handling for chromatograms in dataportal
This is somehow related to specimen handling and to media handling Andreas Müller
12:02 PM Revision 84ff066f (taxeditor): ref #9523: check secundum references of all homotypical synonyms
Katja Luther
12:02 PM feature request #8920: Make reference URL available in details view
So I guess the button should be at one of the following positions:
![](picture771-1.png)
Whenever there is a DO...
Andreas Müller
11:59 AM Revision bdb14f86 (cdmlib): ref #9523: add homotypic synonym secundum informations to TaxonNodeDt...
Katja Luther
11:44 AM bug #8837 (Worksforme): Name editor is not updated after change accepted to synonym
For me this seems to be fixed. The name editor of the old accepted taxon is closed and the new synonym appears in the... Andreas Müller
11:17 AM bug #8831 (Worksforme): saving name editor throws NPE
This appeared before parsing and deduplication was handled serverside (#9078). Since then it was not observed anymore... Andreas Müller
09:18 AM bug #8955: After saving a taxon the taxon navigator scrolls the taxon to the bottom
AM:
ist eigentlich schon implementiert, dass der Navigator bei NameEditor-Save nur aktualisieren muss, wenn der Kn...
Andreas Müller
08:31 AM Revision e5f35b5f (cdm-dataportal): ref #7599 ref #6866 specimen details tables - footnotes & gen...
Andreas Kohlbecker
08:09 AM Revision 8e013268 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - class attribute...
Andreas Kohlbecker
07:55 AM bug #8421 (Rejected): icons in compose_specimen_table_top_down() are not visible
with the new implementation of the derivation tree view this has become obsolete, see #7599 & #6866 Andreas Kohlbecker
07:26 AM feature request #8463: Make DeterminationEvent.references sources
Currently this is not yet available in TaxEditor at all and it is questionable if we need multiple sources at all. I ... Andreas Müller

03/18/2021

11:51 PM feature request #9211 (Resolved): Handle source(s) for Classification
Andreas Müller
09:56 PM feature request #8761 (Resolved): Remove TaxonName_NomenclaturalStatus MN table
Andreas Müller
09:55 PM Revision a4b2a082 (cdmlib-apps): ref #8761 handle TaxonName -> NomenclaturalStatus link correctly...
Andreas Müller
06:46 PM feature request #9114: Handle malformed URIs in user type
This ticket seems to be done or needs to be splitted into an open issues ticket. It can be moved back to 5.19(?) afte... Andreas Müller
06:41 PM bug #8233: [Follow up] Creating type duplicates
I add the "fast" tag for the last issue ("Add "Preferred Stable Identifier" to the list of available identifiers"). I... Andreas Müller
06:37 PM bug #8421: icons in compose_specimen_table_top_down() are not visible
I think this should be assigned to AK Andreas Müller
06:36 PM bug #8659: Taxon navigator: not refreshed after ABCD file import
Is this still an open issue? I think refresh now runs after all imports.
If fixed please close as duplicate or wor...
Andreas Müller
06:24 PM feature request #8922: Make setting of sec-Reference configurable when moving synonyms.
I flag this as fast as it is problably fixed already. Andreas Müller
06:22 PM feature request #8930: Taxon navigator should show icon if a taxon is unpublished
Katja Luther wrote:
> mail WB:
>
> In diesem Zusammenhang wollte ich auch anregen, die als doubtful markierten Ta...
Andreas Müller
05:54 PM bug #8971: Long running tasks in taxon navigator should disable the navigator
Andreas Müller wrote:
> WGB:
>
> hier nur nochmal die Bestätigung, dass das ein an verschiedenen Stellen auftrete...
Andreas Müller
05:40 PM feature request #9089: Show descriptive datasets in description details view
The read only version maybe is fast to implement? Andreas Müller
05:37 PM feature request #9139: When deleting a taxon with images the configuration should also handle the...
is this fast? Andreas Müller
05:32 PM feature request #9298: Preference for IDinSource, IdNamespace and original information in nomencl...
I guess this is fast? Andreas Müller
05:31 PM feature request #9321: Make availability of pro-parte synonyms configurable
I guess this is fast to implement? Andreas Müller
05:30 PM feature request #9328 (In Progress): Adapt Editor to switch to originalSource for taxon secundum
This needs to be implemented as soon as the model changes are committed. Andreas Müller
05:29 PM feature request #9333: Preference for display of protologue section in nomenclatural source section
I think the second part of the description "Additionally we should ..." is already implemented. Is that true? If yes,... Andreas Müller
05:28 PM feature request #9333: Preference for display of protologue section in nomenclatural source section
Hi Katja, what do you think should we reuse the preference? Is it difficult to hide the external link part in the nom... Andreas Müller
05:21 PM feature request #9370: Search in media bulk editor should include search on URI
Maybe a like search is not possible here as it is a CLOB field. We had something similar for Rights search recently (... Andreas Müller
05:00 PM bug #9532 (In Progress): Check whether all data are loaded for NameEditor
Andreas Müller
04:04 PM Revision 4fef22d6 (cdm-vaadin): minor
Andreas Müller
04:03 PM Revision 5e67aad3 (cdm-vaadin): ref #9331 adapt vaadin test data to NamedSource
Andreas Müller
03:37 PM Revision 0122b6f6 (cdmlib): abstract EventDTO and cleaning up DerivationEventDTO - part 3
Andreas Kohlbecker
03:37 PM Revision d35401ce (cdmlib): abstract EventDTO and cleaning up DerivationEventDTO - part 2
Andreas Kohlbecker
03:36 PM Revision 141a7789 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - derivation events
Andreas Kohlbecker
03:21 PM feature request #9332 (Resolved): Rename TypeDesignationBase.source to .designationSource
This is solved in cdmlib but we need to check if it works in TaxEditor and vaadin Andreas Müller
03:06 PM Revision 1ce8157a (cdm-vaadin): ref #9332 adapt some test data to new designationSource in vaadin
Andreas Müller
03:01 PM Revision 38b333bc (taxeditor): ref #9533: fix NPE and remove text when removing name in NewTaxonW...
Katja Luther
02:59 PM Revision 75cc4802 (cdm-dataportal): adaping to modified DerivationEventDTO
Andreas Kohlbecker
02:57 PM Revision 553b0bcc (cdm-dataportal): more generic html class attribute generation
Andreas Kohlbecker
02:55 PM Revision 2fbd16bb (cdmlib): abstract EventDTO and cleaning up DerivationEventDTO
Andreas Kohlbecker
02:19 PM Revision 94775d95 (cdm-vaadin): ref #9330 adapt testdata to removed SEP in vaadin
Andreas Müller
02:12 PM Revision 2ad71923 (cdm-vaadin): ref #9327 adapt vaadin property path(s) to secSource
Andreas Müller
02:11 PM Revision 29dc708b (cdm-vaadin): cleanup
Andreas Müller
02:11 PM Revision a3d00817 (cdm-vaadin): ref #9332 adapt vaadin code to designationSource
Andreas Müller
02:09 PM Revision 82c933d5 (cdm-vaadin): ref #9330 adapt testdata to removed NOR in vaadin
Andreas Müller
02:07 PM Revision f972ab15 (cdm-vaadin): ref #9331 adapt vaadin to NamedSource
Andreas Müller
12:40 PM task #9330 (Resolved): Remove "NomenclaturalSource" from OriginalSourceType
NomenclaturalSource does not make sense as source type anymore (same as potential new source type secundum source). T... Andreas Müller
12:12 PM Revision 4fc43df6 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - more fields
Andreas Kohlbecker
12:12 PM Revision 66f95d41 (cdmlib): pushing propertied from SpecimenOrObservationDTO to DerivedUnitDTO
Andreas Kohlbecker
11:47 AM feature request #9331 (Resolved): Distinguish DescriptionElementSource and NamedSource
Andreas Müller
10:53 AM bug #8723 (Worksforme): Distribution detailsview: changing the area removes the state
This seems to be fixed in the meanwhile. The status is only removed if the status selection does not match to the pos... Katja Luther
10:21 AM feature request #8968 (Resolved): filter Bulk editor for created by
please review Katja Luther
10:20 AM feature request #8968 (New): filter Bulk editor for created by
Added a new column 'created by' which is sortable. Katja Luther
10:20 AM feature request #8968 (Resolved): filter Bulk editor for created by
Applied in changeset commit:taxeditor|57fd518bd253736b63310ea0fde64d96df21569d. Katja Luther
10:21 AM Revision 57fd518b (taxeditor): fix #8968: add created by column to bulk editor
Katja Luther
10:14 AM feature request #9518: Add symbol to descriptions having status individual association in facts view
I guess this is for review Andreas Müller
10:12 AM feature request #9518 (Resolved): Add symbol to descriptions having status individual association...
Applied in changeset commit:taxeditor|76156fc08bc63b480d62d46c945be2897bd65f98. Katja Luther
10:13 AM Revision 76156fc0 (taxeditor): fix #9518: add symbol to description with type individual associa...
Katja Luther
10:04 AM feature request #9515: Add DescriptionType to TaxonDescription of TaxonAssociations in ABCD import
please review Katja Luther
10:02 AM feature request #9515 (Resolved): Add DescriptionType to TaxonDescription of TaxonAssociations in...
Applied in changeset commit:cdmlib|25935ad5dc1e7e1ef297198e5ca0148e36f25230. Katja Luther
10:00 AM feature request #9515: Add DescriptionType to TaxonDescription of TaxonAssociations in ABCD import
Now a description with type IndivialsAssociation is created or if already existing used to add the individual associa... Katja Luther
10:02 AM Revision 25935ad5 (cdmlib): fix #9515: adapt AbcdImport to Descriptiontype.IndividualAssociations
Katja Luther
07:56 AM Revision ec6065fa (cdm-dataportal): ref #7599 ref #6866 specimen details tables - derivation tree...
Andreas Kohlbecker

03/17/2021

12:45 AM Revision 064fbac0 (cdmlib-apps): update pom and cleanup
Andreas Müller
12:38 AM Revision ce3454c3 (cdmlib-apps): cleanup
Andreas Müller
12:37 AM Revision 48ad1dcd (cdmlib-apps): cleanup
Andreas Müller
11:08 PM feature request #9331 (In Progress): Distinguish DescriptionElementSource and NamedSource
Andreas Müller
10:15 PM feature request #9537 (Feedback): Implement ratioToStructure in TaxEditor
for details see #9507.
We also need an according default formatting for the new character.
Andreas Müller
10:14 PM feature request #9507 (Resolved): Add ratioTo structure to Character
ratioToStructure added.
If ratioTo modifier is also needed open new ticket.
Andreas Müller
10:04 PM feature request #9327 (Resolved): Make taxon secundum reference an original source
Andreas Müller
07:28 PM task #9536 (Closed): Remove old single source citation and microCitation columns for secundum and...
and Classification.source (#9211)
Secundum: #9327
follow up for #9315
~~~

//#9536
...
Andreas Müller
07:24 PM task #9315 (Resolved): Remove old single source citation and microCitation columns
Andreas Müller
07:16 PM bug #9007: Enable i18n support for media description UI
This seems to be partly fixed. I18n support exists for media description and for media title.
@Katja, can you please...
Andreas Müller
06:58 PM feature request #8922: Make setting of sec-Reference configurable when moving synonyms.
Katja, can you have a look if this is a real duplicate for #9340 and, if it is, close it as duplicate? Andreas Müller
06:08 PM Revision 463ef01c (cdm-dataportal): moving method
Andreas Kohlbecker
06:05 PM Revision 121bd2f4 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - using RecordBas...
Andreas Kohlbecker
06:03 PM Revision a5abedb6 (taxeditor): cleanup
Andreas Müller
05:48 PM bug #9535 (Closed): harmonize DefinedTermBase and KeyTerm serializations
Andreas Kohlbecker
05:41 PM bug #9535 (Closed): harmonize DefinedTermBase and KeyTerm serializations
DefinedTermBase and KeyTerms are serialized differently:
DefinedTermBase:
~~~json
{
'representation_L10n': ...
Andreas Kohlbecker
05:48 PM Revision cf27d48e (cdm-dataportal): ref #9535 keyterm message_L10n to representation_L10n - adapt...
Andreas Kohlbecker
05:45 PM Revision dc174713 (cdmlib): ref #7599 ref #6866 adding missing SpecimenOrObservationDTO details
Andreas Kohlbecker
05:44 PM Revision 6fedae05 (cdmlib): ref #9535 keyterm message_L10n to representation_L10n
Andreas Kohlbecker
05:23 PM Revision 6261e826 (taxeditor): cleanup test data
Andreas Müller
05:20 PM Revision 886f6760 (cdm-dataportal): ref #7599 ref #6866 specimen details tables additional data f...
Andreas Kohlbecker
05:06 PM Revision 73d4928f (cdm-vaadin): ref #9327 adapt vaadin to new secundum handling
Andreas Müller
05:05 PM Revision 0cb91465 (cdm-vaadin): cleanup
Andreas Müller
04:42 PM Revision 47420a9f (cdm-dataportal): ref #7599 ref #6866 more specimen details tables - tables may...
Andreas Kohlbecker
04:24 PM Revision 9d24e1ba (cdm-dataportal): ref #7599 ref #6866 more specimen details tables for type des...
Andreas Kohlbecker
02:39 PM Revision 26370e4f (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - res...
Andreas Kohlbecker
02:31 PM Revision f46584fb (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - imp...
Andreas Kohlbecker
02:19 PM feature request #9329: Implement sec reference as original source in dataportal
AK:
diese Werte stehen werden an eu.etaxonomy.cdm.remote.json.util.CardinalityPropertyFilter.setExceptions() überg...
Andreas Müller
01:35 PM bug #9533: NPE when reusing name for new taxon
Andreas Müller wrote:
> When deleting the selected name again I now get another NPE:
Also the free text name is n...
Andreas Müller
01:32 PM bug #9533 (Feedback): NPE when reusing name for new taxon
When deleting the selected name again I now get another NPE:
~~~
last remote method : http://api.cybertaxonomy.or...
Andreas Müller
09:18 AM bug #9533 (Resolved): NPE when reusing name for new taxon
This is fixed, but should be released with an hotifx release.
Please review.
Katja Luther
08:00 AM bug #9533 (Closed): NPE when reusing name for new taxon
Using an existing name for a new taxon results in a NPE because of a missing text in textfield for the name. Katja Luther
01:00 PM Revision 18b47e0d (taxeditor): Merge branch 'hotfix/5.21.1'
jenkins
12:43 PM Revision b3e9aa8e (taxeditor): ref #9533: fix NPE in taxonnode detail element
Katja Luther
12:33 PM Revision 4937095e (taxeditor): Updated version in pom / project files to taxeditor version : 5.21...
jenkins
09:22 AM bug #9534 (New): Filtering of reference type does not work correctly
When enter an 'a' into the drop down for the referencetype and clicking on 'Article' does not work. Katja Luther
08:02 AM Revision 46bdf341 (taxeditor): ref #9533: fix NPE in taxonnode detail element
Katja Luther

03/16/2021

12:20 AM bug #8857: NonUniqueObjectException when creating new taxon
I fully removed saveNewTaxonNode now as it is not in use and is not really save. The createTaxonNode method can be us... Andreas Müller
03:04 PM Revision bb4e2e49 (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - cle...
Andreas Kohlbecker
02:59 PM Revision c407b10a (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - gat...
Andreas Kohlbecker
02:58 PM Revision 4fadd759 (cdm-dataportal): method to check variables for isset & not empty - improvement...
Andreas Kohlbecker
02:13 PM Revision 911995a3 (cdm-dataportal): method to check variables for isset & not empty - detecting w...
Andreas Kohlbecker
01:51 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
the regex is now complete according to the notation found on https://en.wikipedia.org/wiki/Consensus_sequence Andreas Kohlbecker
01:33 PM Revision 5a2e89b6 (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - fir...
Andreas Kohlbecker
01:32 PM Revision a85fece4 (cdmlib): ref #7599 gathering date in GatheringDTO
Andreas Kohlbecker
12:14 PM bug #9531 (Resolved): Add Names in OriginalSpelling to the delete configuration
this should be fixed, please review. Katja Luther
12:14 PM Revision 57f556d1 (taxeditor): ref #9531: adapt wizards for name delete
Katja Luther
12:11 PM Revision b2e8f49d (cdmlib): ref #9531: add original spelling to NameDeleteConfig and adapt handli...
Katja Luther
11:32 AM Revision 14f8d7ac (taxeditor): ref #9532: adapt taxonbase propertypath for nameEditor - continue
Katja Luther
10:31 AM Revision 93dfa097 (cdm-dataportal): method to check variables for isset & not empty - improved
Andreas Kohlbecker
10:05 AM Revision a1b229fc (cdm-dataportal): method to check variables for isset & not empty
Andreas Kohlbecker
09:53 AM Revision f84d6d53 (taxeditor): ref #9532: adapt taxonbase propertypath for nameEditor - continue
Katja Luther
09:43 AM Revision 942c70c2 (taxeditor): ref #9532: adapt taxonbase propertypath for nameEditor
Katja Luther
09:40 AM bug #9532 (In Progress): Check whether all data are loaded for NameEditor
The loading of a taxon takes a lot of time, especially the supplemental data view needs several database calls. The p... Katja Luther

03/15/2021

11:11 PM Revision 2af0c8fd (cdm-vaadin): cleanup
Andreas Müller
10:24 PM Revision b8c8c164 (cdm-dataportal): ref #7599 derivative tree view: collapsible unit tree - dotte...
Andreas Kohlbecker
10:18 PM Revision 8898d016 (cdm-dataportal): ref #7599 derivative tree view: collapsible unit tree layout ...
Andreas Kohlbecker
10:10 PM Revision d013aca5 (cdmlib): ref #9327 add first version of update script for v5.22 with update fo...
Andreas Müller
04:06 PM Revision dd3a6e28 (cdm-dataportal): ref #7599 derivative tree view: collapsible unit tree styled ...
Andreas Kohlbecker
02:22 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
With the given uncertainties on additional information like brackets I suggest to use only soft validation (warning b... Andreas Müller
02:19 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
The given regex is not valid anymore for the extended findings we have now on the usage of brackets and Y (and maybe ... Andreas Müller
12:58 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
there was a related ticket already, I add it for discussion informations: #5057 Katja Luther
10:48 AM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
Andreas Müller wrote:
> Is there a reason for this requirment or is it only because we expect sequences to be like t...
Andreas Kohlbecker
01:39 PM Revision 6e6c5a95 (taxeditor): ref #9448: remove SpecimenSearch wizard pages
Katja Luther
12:58 PM Revision 8d0c3f5f (cdm-dataportal): ref #7599 derivative tree view: unit details collapsible
Andreas Kohlbecker
11:11 AM Revision fc5bfc61 (cdm-dataportal): ref #9529 adapting dataportal tests to new bibliographic in-r...
Andreas Kohlbecker
08:48 AM Revision 3b53f511 (cdmlib): fix NPE in cdmlightexport
Katja Luther
08:27 AM bug #9531 (Closed): Add Names in OriginalSpelling to the delete configuration
mail AM:
Es ist so: Arenaria cespitosa Ehrh. hat nicht nur eine Nom. Source sondern ist auch original spelling für...
Katja Luther

03/13/2021

05:37 AM bug #9529: Correct formatting for bibliographic in-reference separation
It looks like we need to update the titleCaches after having this installed. Andreas Müller
05:37 AM bug #9529: Correct formatting for bibliographic in-reference separation
The abbrevCache seems to be missing the dot (in some cases?). See Cichorium endivia - Canary islands (Hansen ref with... Andreas Müller
05:21 AM bug #9529: Correct formatting for bibliographic in-reference separation
NadjaK:
ich bin auch für n-dash, und bei Büchern für die Variante mit Seitenzahlen, das ja auch der Willdenowia-St...
Andreas Müller
04:34 AM bug #9529 (Resolved): Correct formatting for bibliographic in-reference separation
Applied in changeset commit:cdmlib|a7601e2a3c182cbadfed17a9b33ac7c58417c01e. Andreas Müller
04:15 AM bug #9529 (In Progress): Correct formatting for bibliographic in-reference separation
Andreas Müller
02:23 AM bug #9529 (Closed): Correct formatting for bibliographic in-reference separation
AM:
Vorgeschlagen wurden von Norbert zumindest für Zeitschriften:
* Trennung nur per Punkt
Chenopodiastrum (...
Andreas Müller
05:12 AM bug #8297 (Closed): Fix condensed distribution string for E+M
Andreas Müller
05:11 AM bug #8297: Fix condensed distribution string for E+M
Code cleaned-up as far as time for this existed. A followup ticket with an open issue was created: #9526 Andreas Müller
05:09 AM bug #9525 (Closed): Namerelationship source label is missing sometimes
Looks ok. Andreas Müller
04:37 AM feature request #9530 (Closed): Add pages to bibliographic book sections
for details see #9529 Andreas Müller
04:34 AM Revision a7601e2a (cdmlib): fix #9529 correct separation for bibliographic in-references
Andreas Müller
04:16 AM bug #6960 (In Progress): Improve reference cachestrategy
Andreas Müller
03:58 AM Revision a3c8ad20 (cdmlib): change removeTrailingDot to removeTrailingDots
Andreas Müller
02:26 AM Revision c1bb741f (cdmlib): cleanup
Andreas Müller

03/12/2021

04:32 PM task #9528 (Worksforme): synonymy: missplied names sensu with short authorship string
Bei Misapplikationen werden im "sensu"-Teil sämtliche Autoren ohne Initialen aufgeführt. An dieser Stelle würde ein "... Andreas Kohlbecker
03:45 PM bug #9526 (Resolved): Sort order in E+M distribution string should be strictly alphabetic
This should be fixed. Eckhard, can you please review on test server (see link above) it it is ok Andreas Müller
12:05 PM bug #9526 (Closed): Sort order in E+M distribution string should be strictly alphabetic
Currently it is according to vocabulary (which is ordered alphabetically on same levels but ofcourse not for subareas... Andreas Müller
03:32 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
Is there a reason for this requirment or is it only because we expect sequences to be like this.
And why is it a Tax...
Andreas Müller
02:59 PM bug #9527 (New): Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAc...
for data to be entered or modified into the "Consensus Sequence 5' -> 3'" text-area the allowed characters, to be typ... Andreas Kohlbecker
01:45 PM Revision b9d4068f (cdm-dataportal): ref #7599 fixing name link of identifications
Andreas Kohlbecker
01:36 PM feature request #7599: treeView for specimen data in dataportal
Open issues:
* the identifications should be clickable with link to name --> link url broken
* sequence data sh...
Andreas Kohlbecker
01:27 PM feature request #9216: Derivate tree view should merge branches to multiple root elements into on...
This feature has only lower priority since we currently don't have any data with multiple originals Andreas Kohlbecker
12:30 PM Revision dd2dcd5e (cdmlib): Change name of AlphabeticallyAscendingNamedAreaComparator to Ascendi...
Andreas Müller
12:06 PM Revision bb365222 (cdmlib): ref #9526
Andreas Müller
10:55 AM Revision b1101440 (cdm-dataportal): upadating jackson-databind dependency
Andreas Kohlbecker
10:48 AM task #9458 (Closed): Consider lower zoom level as default
Andreas Kohlbecker
10:48 AM task #9458 (Resolved): Consider lower zoom level as default
Applied in changeset commit:cdm-dataportal|7931750e5703e7ae42fc8fd9e24de10f98866d90. Andreas Kohlbecker
10:47 AM Revision 7931750e (cdm-dataportal): fix #9458 setting default max zoom level for maps to 13
Andreas Kohlbecker
10:47 AM Revision f4c1810a (cdm-dataportal): fix setting default max zoom level for maps to 13
Andreas Kohlbecker
10:43 AM Revision c0db9246 (cdm-dataportal): removing old map service URL
Andreas Kohlbecker
10:36 AM Revision bd262a5c (cdmlib): fix missing space in homotypic group string
Katja Luther
10:20 AM bug #9213 (Closed): specimen views 'compressed table' and 'derivate tree' fail when no fieldunits...
this is already solved, see http://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/85176c77-e4b6-4899-a08b-e257... Andreas Kohlbecker
10:19 AM Revision 97147b0d (taxeditor): fix handler names after renaming in fragment.e4xmi
Katja Luther
09:25 AM Revision 1a182481 (taxeditor): featureTree -> termTree - adapt MANIFEST.MF
Katja Luther
09:15 AM Revision dff55a57 (taxeditor): featureTree -> termTree - continue
Katja Luther

03/11/2021

03:15 PM Revision 8d389810 (taxeditor): featureTree -> termTree - continue
Katja Luther
03:10 PM Revision 5fec480a (taxeditor): rename featureTree package to termtree
Katja Luther
02:52 PM Revision e92feae0 (taxeditor): adapt character editor to renamed TermTreeComparator
Katja Luther
02:48 PM Revision 8990c8a9 (taxeditor): adapt to new package structure - continue
Katja Luther
02:45 PM Revision b26c4987 (taxeditor): adapt to new package structure - continue
Katja Luther
02:29 PM feature request #5682 (Closed): Implement condensed distribution string for Cuba
I think this is fixed or requirements are not clear anymore. Therefore I close it. Andreas Müller
01:30 PM Revision 513c1824 (cdm-dataportal): updatinfg and improving docu
Andreas Kohlbecker
01:28 PM Revision b8352f21 (cdmlib): move test resources for util package tests
Andreas Müller
01:15 PM Revision 4fe03e8f (taxeditor): adapt to new package structure
Katja Luther
01:10 PM Revision 9864765e (cdmlib): Cleanup
Andreas Müller
01:10 PM Revision ec1bea22 (cdmlib): move CacheUpdater and SortIndexUpdaterWrapper to service.longrunning
Andreas Müller
12:56 PM bug #9525 (Resolved): Namerelationship source label is missing sometimes
Katja Luther
12:55 PM bug #9525 (Closed): Namerelationship source label is missing sometimes
For Namerelationships the label for the source is missing sometimes. Katja Luther
12:46 PM Revision d34a4e38 (taxeditor): remove Remoting from classnames and rename featuretreecomparator -...
Katja Luther
12:43 PM Revision ee305eb1 (taxeditor): avoid widget is disposed exceptions for termsearch
Katja Luther
12:40 PM Revision 2978c511 (taxeditor): remove Remoting from classnames and rename featuretreecomparator -...
Katja Luther
12:39 PM Revision d991bdfe (taxeditor): remove Remoting from classnames and rename featuretreecomparator
Katja Luther
12:32 PM Revision 0345075d (cdmlib): fix issue related to combine service-layer utility packages
Andreas Müller
12:29 PM Revision 4cd3b432 (cdmlib): cleanup
Andreas Müller
12:29 PM Revision 35e1f27a (cdmlib): fix Save/UpdateEntityListener issue
Andreas Müller
12:23 PM Revision a2fec34c (cdmlib): partly revert b691d5a7b70 removal of Save/Update Event Listeners
Andreas Müller
12:06 PM Revision 33227403 (cdm-vaadin): combine service-layer utility packages in vaadin
Andreas Müller
12:03 PM Revision 989daf68 (cdmlib): combine service-layer utility packages
Andreas Müller
11:43 AM Revision 01bb5e1e (cdm-vaadin): rename RoleProbe(r) in vaadin
Andreas Müller
11:38 AM Revision b528081c (cdmlib): rename RoleProbe(r)
Andreas Müller
10:46 AM task #9524 (New): Use non-model objects in database queries for getDistributionInfoFor
The webservice for distribution infos is slow for larger distributions sets. This could be much improved if retrievin... Andreas Müller
10:39 AM Revision b691d5a7 (cdmlib): cleanup and remove SaveEntityListener and SaveOrUpdateEntityListener
Andreas Müller
10:27 AM Revision a33d468f (cdmlib): cleanup
Andreas Müller
10:10 AM Revision c729e881 (cdmlib): ref #8297, ref #9521 test for recursive fallback area recognition in ...
Andreas Müller
10:07 AM Revision 88ffe656 (cdmlib): cleanup
Andreas Müller

03/10/2021

05:22 PM feature request #9002: Find suitable symbols for excluded, unplaced, placement doubtful
WGB:
dazu die Ergänzung, dass dies erst dann angegangen werden sollte, wenn die mit dem Placement vs. Secundum ver...
Andreas Müller
02:41 PM Revision 2d293643 (cdm-server): Merge branch 'release/5.21.0' into develop
jenkins
02:41 PM Revision ebe71965 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
02:40 PM Revision fe984627 (cdm-server): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
02:34 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
no further hung up incidents on the laptop of andreas kohlbecker.
Still frequent problems on other systems.
Here ...
Andreas Kohlbecker
02:29 PM feature request #9521 (Closed): Fallback areas in textual representation should always stand alone
I close this we can reopen if something does not work. Andreas Müller
02:18 PM Revision a17d517c (cdm-webapp): Merge branch 'release/5.21.0' into develop
jenkins
02:18 PM Revision c0eeb967 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
02:17 PM Revision 0f771957 (cdm-webapp): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
02:17 PM Revision 2e872e73 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.21.0
jenkins
02:17 PM Revision d360557a (cdm-vaadin): Merge branch 'release/5.21.0' into develop
jenkins
02:17 PM Revision 2e23970c (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
02:15 PM Revision 1023f382 (taxeditor): Merge branch 'release/5.21.0' into develop
jenkins
02:15 PM Revision 6e1ac990 (taxeditor): Merge branch 'release/5.21.0'
jenkins
02:14 PM Revision 45dc1b61 (cdm-dataportal): Merge branch 'release/5.21.0' into develop
jenkins
02:14 PM Revision 5ba5f63b (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
02:14 PM Revision c4798de1 (cdm-dataportal): updating poms for branch'release/5.21.0' with non-snapshot ve...
jenkins
02:14 PM Revision b8ad32ba (cdm-vaadin): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
02:14 PM Revision 77318159 (cdm-dataportal): release-preparation: production level css
jenkins
02:14 PM Revision c6791922 (cdm-vaadin): jenkins bumping cdmlib.version to 5.21.0
jenkins
02:13 PM Revision 38c7dd58 (cdmlib): Updating develop poms back to pre merge state
jenkins
02:13 PM Revision 2fa5a819 (cdmlib): Merge branch 'master' into develop
jenkins
02:13 PM Revision 0cadc9f9 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
02:13 PM Revision 01057299 (cdmlib): Merge branch 'release/5.21.0'
jenkins
01:59 PM Revision f1acd159 (cdmlib): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
01:56 PM Revision 5f4c8f64 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.21.0-S...
jenkins
01:56 PM Revision e664d511 (cdm-webapp): updating poms for 5.21.0 branch with snapshot versions
jenkins
01:56 PM Revision 0975ae43 (cdm-webapp): updating poms for 5.22.0-SNAPSHOT development
jenkins
01:56 PM Revision 0761dc5e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.22.0-S...
jenkins
01:47 PM Revision 82d40599 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.22.0-S...
jenkins
12:58 PM Revision c7836dd6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.22...
jenkins
12:57 PM Revision e68970f5 (taxeditor): Updated version in pom / project files to taxeditor version : 5.21...
jenkins
12:57 PM Revision 30411c13 (cdm-vaadin): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:57 PM Revision fdf046c6 (cdm-vaadin): updating poms for 5.21.0 branch with snapshot versions
jenkins
12:57 PM Revision 138c8990 (cdm-vaadin): jenkins bumping cdmlib.version to 5.22.0-SNAPSHOT
jenkins
12:56 PM Revision 8e456fc9 (cdm-dataportal): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:56 PM Revision c5bbbf67 (cdm-server): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:53 PM Revision 81b11e62 (cdmlib): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:52 PM task #9513: "table to div regression": replace scriptler + dynamic parameter plugins
last **TODO**
remove
* Dynamic Parameter Plug-in
* Scriptler Plug-in
Andreas Kohlbecker
12:50 PM task #9513 (Resolved): "table to div regression": replace scriptler + dynamic parameter plugins
Andreas Kohlbecker
12:33 PM bug #9491 (Closed): Order of terms in not order relevant trees
Katja Luther
12:31 PM feature request #9340 (Closed): Workflow support for secundum handling when making synonym a new ...
The check of homotypic synonym secs is moved to a new ticket (#9523), this ticket can be closed. Katja Luther
12:25 PM bug #9520 (Closed): Taxonnode parent merge cascade leads to non-transactional behavior
Seems to work as expected. Katja Luther
11:11 AM Revision d2c49476 (taxeditor): ref #9340: code cleaning
Katja Luther
11:00 AM Revision 5ade3787 (taxeditor): cleanup
Andreas Müller
10:58 AM Revision 468542ec (taxeditor): cleanup
Andreas Müller
10:44 AM Revision 652e719d (taxeditor): fix potential NPE in InverseTermWrapper
Andreas Müller
10:44 AM Revision e36d3242 (taxeditor): cleanup
Andreas Müller
10:42 AM feature request #9523 (New): Check secundum of homotypic synonyms when changing accepted taxon to...
When changing an accepted taxon to a synonym of another accepted taxon, actually only the secundum of the old accepte... Katja Luther
08:49 AM Revision 3f482e4c (taxeditor): ref #9340: add comments
Katja Luther

03/09/2021

07:14 PM Revision 6058f57d (taxeditor): ref #9340: check for different sec in homotypic group
Katja Luther
06:33 PM Revision 2427a5bb (taxeditor): ref #9340: check for different sec in homotypic group
Katja Luther
06:31 PM Revision 13172f31 (cdmlib): ref #9340: correct handling for sec
Katja Luther
06:29 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
For default preference "Keep when same"
Synonym to accepted, keep
syn ref1, homotypic syn ref2, parent ref3 -> ...
Katja Luther
10:00 AM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> If an accepted taxon is converted to a synonym (for an accepted taxon with same sec) its hom...
Katja Luther
05:05 PM feature request #9509 (Closed): IIIF manifest includes media source information
Andreas Kohlbecker
05:05 PM Revision bd13f8fa (cdmlib): ref #9509 fixing LIEs related to sources and identifiers
Andreas Kohlbecker
05:05 PM Revision 14ddcf70 (cdmlib): fixing NPE in iiif/ManifestComposer
Andreas Kohlbecker
05:05 PM Revision bab2a431 (cdmlib): ref #9509 adding identifiers and fixing bug
Andreas Kohlbecker
04:39 PM Revision 184a2a6b (taxeditor): ref #9340: secundum handling if synonym in HG has different sec
Katja Luther
02:42 PM Revision 66806a42 (taxeditor): merge taxon after running operations
Katja Luther
02:09 PM bug #9491 (Feedback): Order of terms in not order relevant trees
Functionality and new code looks looks ok beside this and ticket can be closed. Andreas Müller
12:13 PM bug #9491: Order of terms in not order relevant trees
Can we rename FeatureTreeViewerComparator to TermTreeViewerComparator? "FeatureTree" is deprecated. Maybe we can run ... Andreas Müller
11:57 AM bug #9491: Order of terms in not order relevant trees
Can we delete the commented text in CreateDefinedTermOperation? Andreas Müller
09:49 AM bug #9491 (Resolved): Order of terms in not order relevant trees
Andreas Müller wrote:
> There was still an NPE when editing the title of a tree. I fixed this with a501f1e0 .
>
>...
Katja Luther
01:51 PM Revision 51e33177 (cdmlib): fix test
Katja Luther
01:28 PM Revision 98ccaf43 (cdmlib): add name used in source to cdmlight
Katja Luther
11:17 AM Revision e638fe1d (taxeditor): ref #9340: fix change syn to accept keep sec for homotypic syn
Katja Luther
11:01 AM Revision dca5b6f7 (cdmlib): ref #9340: fix sec handling for homotypic syn when change synonym to ...
Katja Luther
10:42 AM bug #9522: Workflow for reuse name
As the current workflow creates incorrect data we should implement this soon. Andreas Müller
09:28 AM bug #9522 (New): Workflow for reuse name
when an already existing name is reused for a taxon or synonym the following steps should be done:
* check whether...
Katja Luther
10:31 AM Revision 07f58f62 (taxeditor): avoid NPE when classification misses name
Katja Luther
10:08 AM task #9451 (Closed): Cache strategy for classifications is missing
seems to work as expected. Katja Luther
09:59 AM bug #5670 (Closed): Refresh of Taxon Navigator
Andreas Müller wrote:
> Seems to work.
> Only thing I realized, when creating a new taxon via TaxonNode assistant t...
Katja Luther
09:58 AM bug #9512 (Closed): Descriptions being created for individual associations in matrix should have ...
Katja Luther
09:47 AM Revision 03c890d0 (cdmlib): ref #9340: fix sec handling for homotypic syn when moving acc to syn ...
Katja Luther
09:05 AM Revision f42b6825 (cdmlib): ref #9340: fix sec handling for homotypic syn when moving acc to syn ...
Katja Luther
09:02 AM Revision 3c79d7d6 (cdmlib): fix test saveNewTaxonNode
Katja Luther

03/07/2021

11:25 PM Revision 5014c22f (taxeditor): ref #9405, ref #4944 adapt colors for cache protected fields a bit
Andreas Müller
03:31 PM EDIT Platform Etablierung report #9378: Meeting EDIT Platform documentation 2021-02-22
Sollten wir das nicht lieber auf eine WikiSeite schreiben als in ein Ticket? Andreas Müller
12:47 PM feature request #9502: Implement subarea preference rule and fallback areas for areas with comple...
All issues not related to areas with direct multiple parents are fixed with #9521. Now deeper hierarchies with multip... Andreas Müller
12:25 PM feature request #9502: Implement subarea preference rule and fallback areas for areas with comple...
ERS:
mir scheint, Du hast die Probleme nun richtig erfasst und dargestellt.
Zur Krim:
Eigentlich ist gewünsc...
Andreas Müller
12:04 PM task #8671: Distribution in E+M (BM) on different levels
ERS (2020-06-23):
die „Distribution Aggregation“ verhält sich in diesem Fall wie gewollt: ein Unterareal vorhanden...
Andreas Müller
11:39 AM feature request #9500 (In Progress): Allow removing certain distribution status from distribution...
ERS:
Für mich hört es sich plausibel an, für die Behandlung von Subarealen mit dem Status undefined besondere Reg...
Andreas Müller
11:36 AM bug #8297: Fix condensed distribution string for E+M
This should be fixed. Only code cleanup is needed. Andreas Müller
11:36 AM bug #8297: Fix condensed distribution string for E+M
Andreas Müller wrote:
> ... noch ein kleiner Nachtrag: bei der derzeitigen Implementierung kann es auch dazu kommen,...
Andreas Müller
11:30 AM bug #8297: Fix condensed distribution string for E+M
Andreas Müller wrote:
> An open issue:
>
> ... sollen im CondensedDistributionString für die Überareale jeweils n...
Andreas Müller

03/06/2021

10:48 PM Revision 1d41d2cc (cdmlib): ref #9521 handle fallbackarea computation recursively (cont.)
Andreas Müller
08:20 PM Revision 1eba812b (cdmlib): ref #9521 handle fallbackarea computation recursively
Andreas Müller
05:51 PM Revision ad034f89 (cdmlib): ref #9521 fix CCE caused by proxy object
Andreas Müller
05:50 PM Revision bff08cf8 (cdmlib): cleanup
Andreas Müller
04:56 PM Revision ba676069 (cdmlib): cleanup
Andreas Müller
03:41 PM Revision 71abfebc (cdmlib): ref #9521 handle exception in controller (cont.)
Andreas Müller
03:39 PM Revision 6e509e8f (cdmlib): ref #9521 handle exception in controller
Andreas Müller
03:39 PM Revision feebef03 (cdmlib): cleanup
Andreas Müller
01:50 PM feature request #9521 (Resolved): Fallback areas in textual representation should always stand alone
Not yet implemented: show fallback areas only if they have sources (currently they are shown if there is an explicit ... Andreas Müller
12:57 PM feature request #9521 (Closed): Fallback areas in textual representation should always stand alone
Andreas Müller
01:12 PM Revision c160c389 (cdmlib): ref #9521 fallback areas should not appear in textual hierarchy anymo...
Andreas Müller
12:58 PM Revision a04aa53a (cdmlib): ref #9521 fallback areas should not appear in textual hierarchy anymore
Andreas Müller
12:41 PM Revision b848adf1 (cdmlib): cleanup
Andreas Müller
01:11 AM Revision 91626e96 (cdmlib): ref #9500, ref #8297 fix undefined filter (cont.)
Andreas Müller
01:11 AM Revision 7d3af755 (cdmlib): cleanup
Andreas Müller

03/05/2021

12:20 AM Revision 6f6d0ba9 (cdmlib): ref #9500, ref #8297 fix undefined filter
Andreas Müller
12:19 AM Revision 60de16ad (cdmlib): use long instead of int for count
Andreas Müller
12:19 AM Revision 91356769 (cdmlib): cleanup
Andreas Müller
11:48 PM bug #9520 (Resolved): Taxonnode parent merge cascade leads to non-transactional behavior
This needs intensive reviewing as I removed cascading taxon node to parent.
I tested already that the problem itse...
Andreas Müller
06:20 PM bug #9520 (Closed): Taxonnode parent merge cascade leads to non-transactional behavior
If a taxon node is changed and saved the update result also contains its parent and also grandparents up to the class... Andreas Müller
11:39 PM Revision ea17bbe6 (taxeditor): ref #9520 try to fix failing addTaxonNodeCascadeProblem by persist...
Andreas Müller
11:38 PM Revision 761729a1 (taxeditor): invert last commit
Andreas Müller
11:14 PM Revision 0fbf5418 (taxeditor): Try to find the problem with addTaxonNodeCascadeProblem
Andreas Müller
10:53 PM Revision 6611185f (taxeditor): cleanup
Andreas Müller
10:44 PM Revision e657f466 (cdmlib): ref #9500, ref #8297 preliminary add filter for "undefined" status
Andreas Müller
10:41 PM Revision f9e6793c (cdmlib): ref #3816 add distribution status "undefined" UUID to constants
Andreas Müller
10:29 PM Revision c5ec3f4d (cdmlib): ref #9520 fix FeatureNodeServiceImplTest which had incorrect test data
Andreas Müller
10:28 PM Revision 57d188c6 (cdmlib): cleanup
Andreas Müller
09:44 PM Revision 27b9e776 (cdmlib): ref #9520 fix TaxonNodeServiceImplTest after treeIndex is now correct...
Andreas Müller
09:43 PM Revision 16076af1 (cdmlib): ref #9520 move treeIndex update to CdmPreDataChangeListener as SaveOr...
(only when object is explicitly saved or updated) Andreas Müller
09:41 PM Revision fd734dc9 (cdmlib): ref #9520 fix ClassificationServiceImpl und TaxonServiceImplTest for ...
Andreas Müller
09:39 PM Revision 117f7bd2 (cdmlib): ref #9520 fix TaxonNodeNaturalComparator for nodes without treeindex ...
Andreas Müller
09:12 PM Revision a419cd3c (cdmlib): cleanup
Andreas Müller
07:46 PM Revision 200a82b4 (cdmlib): ref #8857 unignore test for #8857
Andreas Müller
07:45 PM Revision ddbbd267 (cdmlib): cleanup
Andreas Müller
06:36 PM feature request #9340 (Feedback): Workflow support for secundum handling when making synonym a ne...
If an accepted taxon is converted to a synonym (for an accepted taxon with same sec) its homotypic synonym having the... Andreas Müller
06:26 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
When testing I sometimes (often at the very beginning after I adapted the test data) got very strange results like pu... Andreas Müller
03:21 PM feature request #9340 (Resolved): Workflow support for secundum handling when making synonym a ne...
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > I have not checked but I guess that th...
Katja Luther
06:22 PM Revision 76512e45 (cdmlib): ref #9520 try to remove cascade from TaxonNode.parent
Andreas Müller
06:10 PM Revision bcd11716 (cdmlib): cleanup
Andreas Müller
05:34 PM Revision 72a9e65f (taxeditor): fix NPE if no activeSession exists
Andreas Müller
04:26 PM bug #9506 (Closed): Rights can not be selected for reuse
This works now. Maybe the server was not restarted when I checked last time. Andreas Müller
04:21 PM bug #8767 (Closed): Workflow support for publish flag
Yes this can be closed. Andreas Müller
03:17 PM bug #8767: Workflow support for publish flag
create follow up ticket for the publish check of the whole homotypic group Katja Luther
03:15 PM bug #8767 (Resolved): Workflow support for publish flag
I think we can close this ticket, I checked all operations mentioned above. Katja Luther
09:39 AM bug #8767: Workflow support for publish flag
Now also MAN -> Synonym works as expected:
acc 1, MAN 0 => Syn 0 (OK)
acc 1, MAN 1 => Syn 1 (OK)
acc 0, MAN 0 =>...
Katja Luther
04:04 PM bug #5670 (Feedback): Refresh of Taxon Navigator
Seems to work.
Only thing I realized, when creating a new taxon via TaxonNode assistant the navigator collapses afte...
Andreas Müller
03:41 PM bug #5670 (Resolved): Refresh of Taxon Navigator
OK, I will review those which work already. Andreas Müller
03:37 PM bug #5670: Refresh of Taxon Navigator
Andreas Müller wrote:
> What is about the other open issues which you did not move to the new ticket yet:
>
> * N...
Katja Luther
03:27 PM bug #5670 (Feedback): Refresh of Taxon Navigator
What is about the other open issues which you did not move to the new ticket yet:
* New Taxon Node / Update Taxon ...
Andreas Müller
02:39 PM bug #5670 (Closed): Refresh of Taxon Navigator
create open issues ticket #9514 Katja Luther
01:59 PM bug #5670: Refresh of Taxon Navigator
I tested NameEditor save and swap and both work well.
Only minor question I have is: can we easily avoid refresh c...
Andreas Müller
12:55 PM bug #5670: Refresh of Taxon Navigator
Andreas Müller wrote:
> Can you please check the lists in the description if they are correct and complete?
>
> (...
Katja Luther
12:43 PM bug #5670 (Feedback): Refresh of Taxon Navigator
Can you please check the lists in the description if they are correct and complete?
(I still have to wait for the ...
Andreas Müller
12:33 PM bug #5670: Refresh of Taxon Navigator
open issues can be taken from callhierarchy of WorkbenchEventConstant.REFRESH_NAVIGATOR Andreas Müller
12:08 PM bug #5670: Refresh of Taxon Navigator
Andreas Müller wrote:
> Now, when changing the name in NameEditor the new taxon is not rearranged within the parent ...
Katja Luther
12:07 PM bug #5670 (Resolved): Refresh of Taxon Navigator
Applied in changeset commit:taxeditor|9f2b6bf28cb2c5ee2cd57937cbde483e929761c0. Katja Luther
11:58 AM bug #5670 (Feedback): Refresh of Taxon Navigator
Now, when changing the name in NameEditor the new taxon is not rearranged within the parent taxon yet.
I think you m...
Andreas Müller
03:47 PM feature request #9519 (New): Add posibilty to add IndividualAssociation descriptions in Facts View
Currently it is not yet possible to set the status of a description manually in the details view. Needs to be discuss... Andreas Müller
03:34 PM bug #9516: Check publish flag of all homotypic synonyms when moving
As this is a follow up ticket we should implement it soon as it is strongly related to the original ticket. Andreas Müller
03:18 PM bug #9516 (New): Check publish flag of all homotypic synonyms when moving
see #8767 Katja Luther
03:30 PM feature request #9514: Open issues for taxon navigator refresh
We should try to handle this in the near future to finish this task which we started in 5.21. Andreas Müller
02:38 PM feature request #9514 (New): Open issues for taxon navigator refresh
* refresh of navigator only if titleCache of the name is changed.
* open the tree for the new position after move ta...
Katja Luther
03:22 PM feature request #9518 (Closed): Add symbol to descriptions having status individual association i...
Similar to literatur descriptions.
Symbol as a first step can be taken from any symbol used in the specimen tree edi...
Andreas Müller
03:18 PM feature request #9517 (New): Descriptions with status "IndividualsAssociation" should only suppor...
Currently all allowed features can be added.
The problem exists in Facts View.
Andreas Müller
03:10 PM feature request #9515 (Closed): Add DescriptionType to TaxonDescription of TaxonAssociations in A...
copied from #9512:
Probably more such descriptions are created by the ABCD import. Katja, can you please check if ...
Katja Luther
03:02 PM bug #9512 (Feedback): Descriptions being created for individual associations in matrix should hav...
This works, though I just realized that the matrix creates such indAss very seldom as it is only relevant for specime... Andreas Müller
11:19 AM bug #9512 (Resolved): Descriptions being created for individual associations in matrix should hav...
Applied in changeset commit:cdmlib|8fea24a9b642e10a89b545ac04352bd582c9835c. Katja Luther
10:49 AM bug #9512 (Closed): Descriptions being created for individual associations in matrix should have ...
Andreas Müller
02:53 PM Revision 5286a7da (taxeditor): ref #5670: avoid CCE in RefreshTreeHandler
Katja Luther
01:41 PM Revision dcb5cd20 (taxeditor): Adapt delete label
Andreas Müller
01:37 PM Revision b9721271 (taxeditor): adapt label
Andreas Müller
01:04 PM Revision dccf74d0 (taxeditor): ref #5670: updating parent node when changing node in taxonnodewizard
Katja Luther
12:28 PM Revision f609e74d (taxeditor): cleanup
Andreas Müller
12:21 PM Revision 6dafedd9 (taxeditor): cleanup
Andreas Müller
12:12 PM Revision dc8182bb (taxeditor): cleanup
Andreas Müller
12:07 PM Revision 9f2b6bf2 (taxeditor): fix #5670: refresh parent node to update the order in navigator
Katja Luther
11:59 AM Revision 425c7a97 (taxeditor): adapt text orientation of unit
Katja Luther
11:54 AM Revision f24708e4 (taxeditor): adapt text orientation of collector, identifier and country row
Katja Luther
11:44 AM bug #7521 (Closed): refresh of taxonnavigator sometimes does not work for moving taxonnodes
Seems to work now Andreas Müller
11:28 AM Revision bf232592 (taxeditor): xxx
Andreas Müller
11:19 AM Revision 8fea24a9 (cdmlib): fix #9512: add type IndividualAssociation to newly created taxonDescr...
Katja Luther
11:07 AM task #9513: "table to div regression": replace scriptler + dynamic parameter plugins
downgrading to v2.263 is not easily possible as this will require to downgrade a couple of plugins also Andreas Kohlbecker
10:55 AM task #9513 (Resolved): "table to div regression": replace scriptler + dynamic parameter plugins
Due to the "table to div regression" the [Configure UI is completely broken after upgrade to 2.264](https://issues.je... Andreas Kohlbecker
10:49 AM Revision 778ddd5e (taxeditor): ref #8767: adapt message for different publish flags in swap acc/syn
Katja Luther
10:13 AM bug #9481 (Closed): ObjectDeletedException when swap syn and accepted with descriptions belonging...
Andreas Müller wrote:
> Works as expected. I did a minor code cleanup. Please check if you think it is correct and c...
Katja Luther
10:11 AM bug #9481 (Feedback): ObjectDeletedException when swap syn and accepted with descriptions belongi...
Works as expected. I did a minor code cleanup. Please check if you think it is correct and close ticket if yes. Andreas Müller
10:06 AM Revision 652454e2 (cdmlib): ref #9481 simplify description copy code
Andreas Müller
10:04 AM Revision ea036daf (cdmlib): cleanup
Andreas Müller
09:04 AM Revision cb7fc5de (taxeditor): label and menu adaptions in character matrix
Katja Luther

03/04/2021

12:37 AM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > Tested MA...
Katja Luther
08:45 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Tested MAN/ppSyn => Syn
> > >
> > >...
Katja Luther
08:40 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > Tested change accepted to synonym
> >...
Andreas Müller
08:37 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
> > Tested MAN/ppSyn => Syn
> >
> > acc 1, MAN 0 => Syn 0 (OK)
> > ...
Andreas Müller
07:10 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
>
> > Katja, can you do the same check for "move accepted to new pare...
Katja Luther
07:04 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Katja, can you do the same check for "move accepted to new parent". I don't if this is alr...
Katja Luther
06:17 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Andreas Müller wrote:
> > Tested change accepted to synonym
> >
> > Old parent 1, old ac...
Katja Luther
06:06 PM bug #8767: Workflow support for publish flag
Katja, can you do the same check for "move accepted to new parent". I don't if this is already fully fixed, committed... Andreas Müller
06:04 PM bug #8767: Workflow support for publish flag
Tested move synonym/homotypic group to another taxon
Old acc 1, old syn 1, new acc 1 => new syn 1 w/o warning (OK)...
Andreas Müller
05:48 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Tested MAN/ppSyn => Syn
>
> acc 1, MAN 0 => Syn 0 (OK)
> acc 1, MAN 1 => Syn 0 (FALSE)
...
Katja Luther
05:44 PM bug #8767: Workflow support for publish flag
change synonym to accepted taxon
Old acc 1, old syn 1, new parent 1 => new acc 1 w/o warning (OK)
Old acc 1, old ...
Andreas Müller
05:35 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Tested change accepted to synonym
>
> Old parent 1, old acc 1, new acc 1 => new syn 0, w/...
Andreas Müller
05:33 PM bug #8767: Workflow support for publish flag
Tested change accepted to synonym
Old parent 1, old acc 1, new acc 1 => new syn 0, w/o warning (FALSE, should be 1...
Andreas Müller
05:10 PM bug #8767: Workflow support for publish flag
Tested MAN/ppSyn => Syn
acc 1, MAN 0 => Syn 0 (OK)
acc 1, MAN 1 => Syn 0 (FALSE)
acc 0, MAN 0 => Syn 0 (OK)
acc...
Andreas Müller
05:00 PM bug #8767: Workflow support for publish flag
Tested Syn => MAN/ppSyn
acc 1, syn 0 => MAN 0 (OK)
acc 0, syn 1 => MAN 1 (OK)
acc 0, syn 0 => MAN 0 (OK)
Andreas Müller
04:17 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> For operations like swap I do not see the need to test for the parent if the old and the new a...
Andreas Müller
04:10 PM bug #8767: Workflow support for publish flag
For operations like swap I do not see the need to test for the parent if the old and the new accepted have the same p... Katja Luther
03:37 PM bug #8767: Workflow support for publish flag
Katja, can you please test correct functionality for each of the above operations and leave a message in this ticket ... Andreas Müller
03:35 PM bug #8767 (Feedback): Workflow support for publish flag
Testing swap:
* if parent taxon has state 1 and old+new taxon state 2 no warning appears
* if warning appears it ...
Andreas Müller
11:17 PM Revision b8480a47 (cdmlib): fix NPE
Katja Luther
11:08 PM Revision 527e30cd (taxeditor): set sourcelabel after creating controls
Katja Luther
10:46 PM Revision ea24e836 (cdmlib): ref #9340: fix handling of secundum for synonyms
Katja Luther
09:28 PM Revision 686ed38c (cdmlib): ref #9340: same sec handling for all synonyms of the moved accepted t...
Katja Luther
09:25 PM Revision 733fcb2d (taxeditor): ref #9340: correct handling of sec for moving one more taxa to syn...
Katja Luther
08:47 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Katja Luther wrote:
> Andreas Müller wrote:
> > I have not checked but I guess that the secundum of other synonyms ...
Andreas Müller
08:36 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> I have not checked but I guess that the secundum of other synonyms in the homotypic group is...
Katja Luther
08:13 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
I have not checked but I guess that the secundum of other synonyms in the homotypic group is probably not checked yet... Andreas Müller
07:59 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> I test all other preferences (except for default preference) for change "synonym to accepted...
Andreas Müller
07:46 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
I test all other preferences (except for default preference) for change "synonym to accepted taxon" and "change taxon... Andreas Müller
07:39 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> The preference says
>
> ![](picture937-1.png)
>
> Is it true that it is only for thes...
Katja Luther
07:36 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
The preference says
![](picture937-1.png)
Is it true that it is only for these 2 operations or should we adapt...
Andreas Müller
07:33 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Katja, can you please run the same type of tests for
* move synonym to another taxon
* move accepted to new pare...
Andreas Müller
07:32 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Further tested change accepted to synonym (with default preference)
Old parent sec2, oldAcc null, newAcc sec1 => w...
Andreas Müller
07:25 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested change synonym to accepted taxon (with default preference)
OldAcc sec1, oldSyn sec1, newParent sec1 => newA...
Andreas Müller
06:46 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested change accepted to synonym (with default preference)
Old parent sec1, oldAcc sec1, newAcc sec1 => warning (...
Andreas Müller
04:09 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Also the message seems to mention the old accepted taxon but I think finally we decided that here the old accepted ta... Andreas Müller
04:07 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested: Syn => Acc
![](picture023-1.png)
The dialogue title and the message seem to be mixed up, they should be...
Andreas Müller
03:59 PM feature request #9340 (Feedback): Workflow support for secundum handling when making synonym a ne...
Generally use se**c**undum not sekundum in German dialogues (and elsewhere) as secundum is Latin. I don't think there... Andreas Müller
03:49 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested: Syn => MAN and back
In step 1 sec was deleted (OK)
In step 2 sec was added (taken from accepted) - (OK, ...
Andreas Müller
08:23 PM Revision 7c992431 (taxeditor): smaller label issues
Katja Luther
08:19 PM Revision f9c172a1 (taxeditor): add translation for secundum reference pref page label
Katja Luther
07:37 PM Revision 5f6b535c (cdmlib): ref #9340: fix error for keepWhenSame
Katja Luther
07:09 PM Revision 7ff96e13 (taxeditor): ref #8767: fix warning for same publish flag when moving taxa
Katja Luther
05:36 PM Revision c3a27807 (taxeditor): label issues in term editors
Katja Luther
05:34 PM Revision 61e77456 (taxeditor): ref #8767: check for publish when moving taxon
Katja Luther
05:16 PM Revision 60558f86 (cdmlib): ref #8767: keep publish flag for MAN -> syn
Katja Luther
05:15 PM Revision db1b9b38 (cdmlib): ref #8767: keep publish flag for MAN -> syn
Katja Luther
05:03 PM Revision f92f7076 (cdmlib): ref #8767: add publish status to taxonnodedto
Katja Luther
04:20 PM Revision eaf81585 (taxeditor): ref #9340: correct message
Katja Luther
04:18 PM Revision 028f99e1 (taxeditor): ref #9340: title and message where mixed up
Katja Luther
04:09 PM Revision 78cc32b1 (taxeditor): ref #9340: change sekundum to secundum
Katja Luther
04:04 PM Revision ceda623b (taxeditor): ref #9340: change sekundum to secundum
Katja Luther
03:55 PM Revision 807ef200 (taxeditor): small changes in matrix menu
Katja Luther
03:51 PM bug #9481: ObjectDeletedException when swap syn and accepted with descriptions belonging to a des...
fixed. Katja Luther
03:50 PM bug #9481 (Resolved): ObjectDeletedException when swap syn and accepted with descriptions belongi...
Applied in changeset commit:cdmlib|64c76cb2c3937cf979045741195fae0ade7013a6. Katja Luther
03:08 PM bug #9481 (Feedback): ObjectDeletedException when swap syn and accepted with descriptions belongi...
No exception anymore, but it looks like the descriptions are duplicated now.
I ran on Arenaria serpyllifolia Bourg...
Andreas Müller
03:50 PM Revision 64c76cb2 (cdmlib): fix #9481: fix doubled descriptions
Katja Luther
02:59 PM Revision 63583e76 (cdmlib): ref 9506: search also for abbrevText and show only the parts available
Katja Luther
02:28 PM bug #7091 (Closed): Add uri field and abbreviatedText to Righs in supplemental data
seems to work as expected. Andreas Müller
11:36 AM bug #7091 (Resolved): Add uri field and abbreviatedText to Righs in supplemental data
this should be fixed. Katja Luther
10:05 AM bug #7091: Add uri field and abbreviatedText to Righs in supplemental data
Licences become more important in future (Chichorieae has such data) so we should try to implement it soon Andreas Müller
02:25 PM bug #9506 (Feedback): Rights can not be selected for reuse
Katja Luther wrote:
> Andreas Müller wrote:
> > We should also include abbrev and uri if data is not empty (see #70...
Andreas Müller
02:20 PM bug #9506: Rights can not be selected for reuse
Katja Luther wrote:
> Andreas Müller wrote:
> > Empty values are not handled correctly:
> >
> > ![](picture205-1...
Andreas Müller
11:20 AM bug #9506 (Resolved): Rights can not be selected for reuse
Andreas Müller wrote:
> We should also include abbrev and uri if data is not empty (see #7091)
this is fixed.
Katja Luther
11:08 AM bug #9506 (In Progress): Rights can not be selected for reuse
Andreas Müller wrote:
> Empty values are not handled correctly:
>
> ![](picture205-1.png)
>
> I think empty or...
Katja Luther
10:12 AM bug #9506: Rights can not be selected for reuse
Finally we could add a filter to search only on certain rights types. But this might be another ticket. Andreas Müller
10:11 AM bug #9506: Rights can not be selected for reuse
We should also include abbrev and uri if data is not empty (see #7091) Andreas Müller
10:09 AM bug #9506 (Feedback): Rights can not be selected for reuse
Empty values are not handled correctly:
![](picture205-1.png)
I think empty or null values should not show up i...
Andreas Müller
01:07 PM bug #9510: Improve label for descriptions created via DDS matrix
... ich sehe gerade, dass die obige Labeldiskussion v.a. fürs Portal gedacht war, dennoch vielleicht auch passend für... Andreas Müller
01:03 PM bug #9510: Improve label for descriptions created via DDS matrix
Auch das Label der Specimen description selber entspricht noch nicht ganz dem, wie wir es mal besprochen haben:
...
Andreas Müller
10:51 AM bug #9510: Improve label for descriptions created via DDS matrix
The above suggestion are only meant as first ideas. Please feel free to suggest/find better labels. Andreas Müller
10:50 AM bug #9510 (In Progress): Improve label for descriptions created via DDS matrix
The automatically created label for a new "literature" description is something like {name of DDS}: Factual data set ... Andreas Müller
11:38 AM bug #8760: Presentation and linking of molecular data in specimen table too unclear
A current working link: http://campanula.e-taxonomy.net/cdm_dataportal/taxon/2e3aa801-7307-409c-bd39-d825f5f1e031/spe... Andreas Müller
11:35 AM Revision 0fe8c1ba (taxeditor): ref #7091: add abbrev. text and uri to rights
Katja Luther
11:17 AM Revision 9f92498d (cdmlib): ref 9506: show uri and abbrev text when available
Katja Luther
11:07 AM Revision 14c8d1f0 (cdmlib): ref 9506: do not show empty rights in rights selection dialog
Katja Luther
11:02 AM Revision 50ddfe8e (cdm-dataportal): installinv universalviewer version 3.1.1. with patch for UV b...
Andreas Kohlbecker
11:01 AM feature request #9511 (New): Move specimens/individual associations for matrix into same description
If one adds a new specimen description in the matrix for a specimen that is not yet attached as individuals associati... Andreas Müller
10:35 AM bug #9488 (Closed): Show details of description in character matrix
This works now. Andreas Müller
10:01 AM bug #6688 (Duplicate): Rights do not show up in rights search if no text is given
duplicates #9506 Andreas Müller

03/03/2021

06:51 PM feature request #9509: IIIF manifest includes media source information
implemented, formatting of the output my need further improvement Andreas Kohlbecker
06:49 PM feature request #9509 (Resolved): IIIF manifest includes media source information
Applied in changeset commit:cdmlib|5a1bde2d875ebc302cae81e09f994cae51877b67. Andreas Kohlbecker
06:23 PM feature request #9509 (Closed): IIIF manifest includes media source information
source data of media entities need to be added to the IIIF manifests.
This need to be implemented into the `Manife...
Andreas Kohlbecker
06:49 PM Revision 5a1bde2d (cdmlib): fix #9509 adding media.source information to iiif manifest
Andreas Kohlbecker
05:54 PM feature request #9508 (New): OpenID Connect 1.0 authentication with ORCID
ORCID offers an OpenID Connect 1.0 (a simple identity layer on top of the OAuth 2.0 protocol) service which allows to... Andreas Kohlbecker
02:24 PM bug #9488 (Resolved): Show details of description in character matrix
Andreas Müller wrote:
> Adding a source was possible but I could not persist the change. After reopening the changes...
Katja Luther
02:01 PM bug #9506: Rights can not be selected for reuse
is this already for review? Andreas Müller
12:22 PM bug #9506: Rights can not be selected for reuse
now the search is on text and agent.titlecache and the label contains {text} - {agent.titleCache} - {type.titleCache} Katja Luther
12:20 PM bug #9506 (Resolved): Rights can not be selected for reuse
Applied in changeset commit:cdmlib|90f0f3376dce0188f40dad490274d666ad82c2c5. Katja Luther
12:44 PM Revision daa29c68 (taxeditor): ref #9340: add sec check for move synonym to another taxon
Katja Luther
12:14 PM Revision 90f0f337 (cdmlib): fix #9506: the rights were filtered by text, this fixed now
Katja Luther
11:30 AM bug #9481 (Resolved): ObjectDeletedException when swap syn and accepted with descriptions belongi...
yes please review Katja Luther
11:29 AM bug #9481: ObjectDeletedException when swap syn and accepted with descriptions belonging to a des...
is this for review? Andreas Müller
11:18 AM Revision 166d445c (taxeditor): ref #9488: add workbench constants
Katja Luther
11:10 AM Revision 3cccbe35 (taxeditor): ref #9488: fix persisting of changed descriptions
Katja Luther
10:38 AM feature request #9507: Add ratioTo structure to Character
NK:
Es gibt eine Reihe von Properties, die für Relationen zwischen Strukturen genutzt werden und zu denen in unser...
Andreas Müller
10:36 AM feature request #9507 (Closed): Add ratioTo structure to Character
Some characters handle the ratio between two structures, e.g. length ratio between corolla and calyx.
For this we ...
Andreas Müller
10:02 AM Revision b41b2728 (taxeditor): add exception handling in CachingHttpInvokerProxyFactoryBean
Andreas Müller
08:27 AM feature request #9473: Support moving images to new taxa similar to facts
This is critical as we need it for the new media handling strategy Andreas Müller

03/02/2021

11:10 PM bug #9506: Rights can not be selected for reuse
The problem is probably that for copyrights usually only an agent and the rights type is given, but no text.
So the ...
Andreas Müller
10:35 PM bug #9506 (Closed): Rights can not be selected for reuse
The selection dialog for rights does not show any existing data even if "*" is entered.
This happened in the cypru...
Andreas Müller
10:09 PM bug #9488 (Feedback): Show details of description in character matrix
Adding a source was possible but I could not persist the change. After reopening the changes were missing.
This is...
Andreas Müller
09:40 PM feature request #3816 (Closed): Create "Undefined" status and choose it for NULL status
Fixed. The update script is handled in separat ticket #9505. Andreas Müller
09:39 PM feature request #9505 (New): Set missing distribution status to "undefined"
copied from #3816
Before, check which data are affected and think about if it is really necessary.
Andreas Müller
09:33 PM bug #9491 (Feedback): Order of terms in not order relevant trees
There was still an NPE when editing the title of a tree. I fixed this with a501f1e0 .
It generally works. Only I d...
Andreas Müller
09:21 PM bug #9504 (Closed): Changing term tree title is not persisted
If I create a new term tree and change the title before saving the title is reset to the default title after saving Andreas Müller
09:15 PM feature request #9499 (Closed): Make isAbsent editable in DetailsView
This is fixed though "should be disabled for mangaged terms" is not yet implemented. But it seems that this is not ye... Andreas Müller
03:18 PM feature request #9499 (Resolved): Make isAbsent editable in DetailsView
Applied in changeset commit:taxeditor|a524e7d8a97c00b9274b767e73f75d0a47627da0. Katja Luther
02:11 PM feature request #9499 (Closed): Make isAbsent editable in DetailsView
For PresenceAbsenceTerm the isAbsent attribute is not yet editable and visible.
As idInVoc (and others) editing sh...
Andreas Müller
08:57 PM Revision a501f1e0 (taxeditor): ref #9491 fix NPE in comparator
Andreas Müller
08:57 PM Revision f0f4b490 (taxeditor): cleanup
Andreas Müller
08:38 PM bug #7107: "Omit level" (TDWG Level2) in distribution hierarchy should not supress distributions ...
AM:
ich sehe gerade auf http://www.europlusmed.org/cdm_dataportal/taxon/6a8e85bd-5e52-4ae2-9444-99128c87a672, dass...
Andreas Müller
08:19 PM feature request #9502: Implement subarea preference rule and fallback areas for areas with comple...
AM:
Problematisch sind derzeit ja noch die Fallback-Areale, die viele Hierarchiestufen haben oder überlappen. Also...
Andreas Müller
07:31 PM feature request #9502 (New): Implement subarea preference rule and fallback areas for areas with ...
#5050 defines the subarea preference rule and also describes implements it for areas Ju, Cz, IJ and LS which are rela... Andreas Müller
08:17 PM feature request #9500: Allow removing certain distribution status from distribution publication
AM:
Und noch etwas bezüglich undefined:
Im alten Portal werden diese Status ja auch grundsätzlich nicht mitbrüc...
Andreas Müller
08:15 PM feature request #9500: Allow removing certain distribution status from distribution publication
AM:
In einigen Fällen, und insbesondere in den Fällen, bei denen die Unterareale nur eine undefined Verbreitung ha...
Andreas Müller
03:40 PM feature request #9500 (In Progress): Allow removing certain distribution status from distribution...
from #8858#note-14
An even better solution might be to use a term tree for filtering an ordering the distribution ...
Andreas Müller
08:14 PM bug #8297: Fix condensed distribution string for E+M
An open issue:
... sollen im CondensedDistributionString für die Überareale jeweils nur die Unterarealstatus ausge...
Andreas Müller
08:12 PM task #9501: Find inconsistent higher area distribution status data in E+M
AM:
Ein ähnlicher Fall, der mir nicht ganz klar ist, ist der, wenn es für das Überareal einen Status mit höherer P...
Andreas Müller
07:03 PM task #9501: Find inconsistent higher area distribution status data in E+M
The results of the query were sent to ERS today. Andreas Müller
07:03 PM task #9501 (New): Find inconsistent higher area distribution status data in E+M
The distribution status of a higher area (area with subareas) should usually not have a higher status then the highes... Andreas Müller
07:59 PM feature request #9484 (Rejected): Distinguish default hidden/fallback area handling from empty li...
In #9502 it was decided that hidden and fallback areas should better be handled by term trees so the current ticket i... Andreas Müller
07:58 PM feature request #9503 (New): Handle term tree of areas and distribution status for distributionIn...
This is blocked by #9500 and/or #9502.
See the description there for further information.
Andreas Müller
07:51 PM bug #9486 (Duplicate): Fallback areas not handled in area hierarchy are not showing up correctly ...
This is more or less a duplicate for #9502. Andreas Müller
07:45 PM feature request #3904 (Closed): EuroMed: Implement filtering rules for distributions
All subtasks and related are closed. Open issues are handled in follow up tickets #9500 (for status) and #9502 (for a... Andreas Müller
07:42 PM feature request #5050 (Closed): revise the subAreaPreference rule for filtering Distributions
Generally this is fixed. The subarea preference is implemented for map creation. Some open issues with fallback areas... Andreas Müller
07:33 PM task #8671 (Rejected): Distribution in E+M (BM) on different levels
As the rule is clear that supra-area information should not be shown on maps as long as subarea information is avail... Andreas Müller
07:10 PM bug #8670 (Closed): Unwanted distribution aggregation/display on 2 levels
As there were no complaints about this issue anymore since the ticket was resolved I close it. Open new ticket for an... Andreas Müller
03:41 PM bug #8858 (Closed): Ordering of distribution status 'undefined' is not correct in E+M
The new implementation works as expected. The result is for Talinum paniculatum on test is "-● -Md(??M) [aAu(A) pAz(a... Andreas Müller
01:36 PM bug #8858: Ordering of distribution status 'undefined' is not correct in E+M
Applied in changeset commit:cdmlib|4dccf2d61ae938ff7638aa262de483068859fd3b. Andreas Müller
01:34 PM bug #8858 (Resolved): Ordering of distribution status 'undefined' is not correct in E+M
The reason why the first fix didn't work is that PresenceAbsenceTerm had it's own compareTo method, including an isPr... Andreas Müller
03:18 PM Revision a524e7d8 (taxeditor): fix #9499: add isAbsent checkBox to details view
Katja Luther
02:15 PM bug #9475 (Closed): NameTypeDesignations for existing names in other nom acts can not be created
Andreas Kohlbecker
01:36 PM Revision 4dccf2d6 (cdmlib): fix #8858 Improve presence/absence handling for PresenceAbsenceTerm.c...
Andreas Müller
01:36 PM Revision 372d9011 (cdmlib): cleanup
Andreas Müller
12:15 PM feature request #9494 (Closed): Improve UI: Selection of ranks in Name Editor
closing as duplicate Andreas Kohlbecker
09:43 AM Revision d170d72d (cdmlib): ref #8767: fix publish flag when change man to syn
Katja Luther
09:36 AM bug #9483 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trin...
Andreas Kohlbecker
09:36 AM feature request #8981 (Closed): Improve NameStatus in UI
Andreas Kohlbecker
09:34 AM Revision 24398f04 (cdmlib): minor
Andreas Müller
09:33 AM feature request #9498 (Closed): Password Recovery, Registration and Login Dialog Tab fully functi...
this is needed for the cdm-vaadin login dialog tab "Password Recovery " Andreas Kohlbecker
09:32 AM feature request #9497 (Closed): User self registration service
this is needed for the cdm-vaadin login dialog tab "Register" Andreas Kohlbecker
09:03 AM Revision 5e7f74f5 (taxeditor): smaller label issues
Katja Luther

03/01/2021

11:36 PM Revision 56fcd434 (cdmlib): cleanup
Andreas Müller
10:10 PM feature request #9496 (New): Handling fossil taxa
unsure how to do this.
PhycoBank need a "fossil" flag.
Where to place this?
In databases, a name is flaged as f...
Wolf-Henning Kusber
10:06 PM feature request #9495 (New): Handling ISSN and ISBN if a publication is hard copy and electronic
ISSN should be supplemented by a eISSN field
ISBN should be supplemented by a eISBN field
Field name to be discus...
Wolf-Henning Kusber
10:01 PM feature request #9494 (Closed): Improve UI: Selection of ranks in Name Editor
The normal usecase is that 95% of name registrations are using just 5 ranks.
Some ranks in the selection are irrelev...
Wolf-Henning Kusber
09:46 PM bug #9493 (New): Duplicate of species epithet when an existing species name is used for typification
After selection of an existing species name for typification, the selection of species epithets in the Name editor sh... Wolf-Henning Kusber
07:50 PM feature request #9492: Improve NameStatus in UI - new
"Icn Shenzhen 2017" is not needed for PhycoBank
ICN is not the title
the year of publication is 2018
This is a...
Wolf-Henning Kusber
07:19 PM feature request #9492 (New): Improve NameStatus in UI - new
Follow up zu #8981
Currently the fields are shown:
Status type // Reference // Reference detail // Rule considere...
Wolf-Henning Kusber
07:21 PM feature request #8981: Improve NameStatus in UI
This ticket can be closed.
new ticket: #9492
Wolf-Henning Kusber
06:40 PM bug #9491 (Resolved): Order of terms in not order relevant trees
Changed to client side ordering because the server does not know about the preference "Show Id in Vocabulary" for the... Katja Luther
05:01 PM bug #9491 (Closed): Order of terms in not order relevant trees
The order of not order relevant trees in term tree editors should be alphabetic. Katja Luther
06:40 PM Revision 1a4389ec (taxeditor): ref #9491: do the ordering on editor side - code cleaning
Katja Luther
06:31 PM Revision 0073b027 (cdmlib): ref #9491: revert changes in cdmlib
Katja Luther
06:26 PM Revision 85f422a4 (taxeditor): ref #9491: do the ordering on editor side
Katja Luther
06:20 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
The name type section works for new genera names as well as for expisting names as expected.
The recorded error was ...
Wolf-Henning Kusber
04:06 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
I cant see any problem.
Here you can see me choosing the section (non sense data) of the typifying authors:
![]...
Andreas Kohlbecker
05:58 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
Trinominals can be created and stored. If this is due to #9483 this ticket can be closed. Wolf-Henning Kusber
04:50 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
new ticket for possibly better solution #9490 Andreas Kohlbecker
03:11 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
Hi Henning, this issue can be reviewed again. Andreas Kohlbecker
03:08 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
Usually we are passing initStrategies to the service methods in order to initialize associated entities. In this case... Andreas Kohlbecker
05:50 PM bug #9485 (Closed): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
Andreas Kohlbecker
05:43 PM bug #9485: TaxonNamePopupEditor: StackOverflow on selecting ICN reference
works as expected, ticket can be closed. Wolf-Henning Kusber
10:38 AM bug #9485 (Resolved): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
Applied in changeset commit:cdm-vaadin|3035e8761cb98d17cd8c2874305069953d656310. Andreas Kohlbecker
08:23 AM bug #9485 (Closed): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
Selection of a ICN reference causes an error

Name editor, new name goto nom.inval., select nom.inval.
Sele...
Andreas Kohlbecker
05:35 PM Revision 520afc6d (cdmlib): fix #9483 better solution by using rankClass only - restoring chanche...
Andreas Kohlbecker
05:23 PM Revision 6d804466 (cdmlib): fix #9483 better solution by using rankClass only
Andreas Kohlbecker
05:04 PM bug #9488 (Resolved): Show details of description in character matrix
this should be fixed, please review Katja Luther
04:09 PM bug #9488 (Closed): Show details of description in character matrix
mail NK:
wenn ich in der Matrix mit dem Kontext-Menu zu einem Taxon "Create literature description" hinzufüge, bek...
Katja Luther
04:51 PM bug #8312 (Closed): Test, fix, improve and run Transmission engine for E+M
This should be fixed with the implementation of transmission engine and following unified description aggregation as ... Andreas Müller
04:50 PM task #9490 (Closed): avoid rank entity in TaxonNameParts
... vielleicht kann man den auch loswerden .... rankSpecificNamePart
kann man auch sofort bei der Bildung des DTO a...
Andreas Kohlbecker
04:43 PM feature request #2625 (Closed): [E+M Overview] Data aggregation functionalities for E+M (Transmis...
This should be fixed with the transmission engine implementations (see subtasks) and with the implementation of descr... Andreas Müller
04:19 PM Revision 48671d79 (cdmlib): add _ to label to add the new term at the beginning of the terms list
Katja Luther
04:13 PM Revision 97eff560 (cdmlib): cleanup
Andreas Müller
04:12 PM bug #9489 (New): Fix header of character matrix for hierarchical characters
mail NK:
Matrix header: für den Matrix header in der obersten Hierarchie-Ebene, also 1. Spaltenüberschiriftenzeile...
Katja Luther
04:10 PM Revision 7e689eb5 (taxeditor): ref #9488: fix details view for descriptions in character matrix
Katja Luther
04:09 PM bug #9470 (Closed): CollectionDTO constructor prevent from circles
Andreas Kohlbecker
04:07 PM Revision 683c7385 (cdm-vaadin): fixing bug in NameTypeDesignationPresenter
Andreas Kohlbecker
03:24 PM feature request #9487 (New): Split state (and/or other big) vocabularies
mail NK:
Das Handling großer Vokabulare (States!) ist immer noch recht mühselig, wegen langer Lade- und Speicherzeit...
Katja Luther
03:21 PM Revision a05e4acf (cdmlib): fix #9483 initializing rank.vocabulary in the TaxonNameParts construc...
Andreas Kohlbecker
03:21 PM Revision cb271641 (cdmlib): cleanup
Andreas Kohlbecker
03:20 PM Revision b858a126 (cdmlib): children of termnodedto should be ordered alphabetically when not ord...
Katja Luther
03:20 PM Revision e9f80908 (cdmlib): children of termnodedto should be ordered alphabetically when not ord...
Katja Luther
03:18 PM bug #9476 (Closed): SpecimenTypeDesignations for existing names in other nom acts can not be created
Andreas Kohlbecker
03:10 PM Revision d10e9a39 (cdmlib): fix #9483 initializing rank.vocabulary in the TaxonNameParts constructor
Andreas Kohlbecker
02:19 PM bug #8310 (Closed): Issues to solve in E+M shapefile
I think generally we can close this ticket. Open and new issues can be handled in separate tickets like #9367. Open i... Andreas Müller
12:51 PM bug #8310: Issues to solve in E+M shapefile
There is another open issue reported in #9367 Andreas Müller
02:08 PM bug #4409: fallback areas are not adressable in the shape file
Andreas Müller wrote:
> This seems to be fully fixed except for the Baltic states issue handled in #9367. TCS is now...
Andreas Müller
01:25 PM bug #4409 (Closed): fallback areas are not adressable in the shape file
This seems to be fully fixed except for the Baltic states issue handled in #9367. TCS is now shown as 1 area if no su... Andreas Müller
11:05 AM bug #4409 (Resolved): fallback areas are not adressable in the shape file
Andreas Müller wrote:
> This should be fixed now. Either with #8858 or already before. Open issues are otherwise han...
Andreas Müller
10:59 AM bug #4409 (Closed): fallback areas are not adressable in the shape file
This should be fixed now. Either with #8858 or already before. Open issues are otherwise handled in #8297 and related... Andreas Müller
02:05 PM bug #9486 (Duplicate): Fallback areas not handled in area hierarchy are not showing up correctly ...
followup from #4409
In #4409 correct handling of fallback areas like Ju, Cz, IJ and LS in maps have been fixed. Un...
Andreas Müller
01:53 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
log from a hangup:
~~~
Mar 01 13:40:35 edit-community systemd[1]: Starting user-0.slice.
Mar 01 13:40:35 edit-co...
Andreas Kohlbecker
01:49 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
hung up still happen
attempt to find the cause by more loggin by logging the post-receive script execution with sy...
Andreas Kohlbecker
01:40 PM Revision a5cc95ce (cdmlib): children of termnodedto should be ordered alphabetically when not ord...
Katja Luther
01:13 PM bug #9478 (Closed): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow fa...
no regression occurs in the case described in #7245
no duplicate of #8249
and fully solved
Andreas Kohlbecker
12:34 PM Revision b0f33c74 (cdmlib): ref #9481: move the descriptions to the new taxon to avoid DDS when d...
Katja Luther
11:33 AM bug #9480 (Closed): SpecimenTypeDesignationEditor: designationReference --> new should be limited...
Andreas Kohlbecker
10:38 AM Revision 3035e876 (cdm-vaadin): fix #9485 fixing stack overflow on setting component error
Andreas Kohlbecker
09:50 AM bug #8297: Fix condensed distribution string for E+M
AM:
auf introduced: doubtfully introduced (perhaps cultivated only) bist du noch nicht explizit eingegangen in de...
Andreas Müller
 

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