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From 02/16/2021 to 03/17/2021

03/17/2021

11:08 PM feature request #9331 (In Progress): Distinguish DescriptionElementSource and NamedSource
Andreas Müller
10:15 PM feature request #9537 (Feedback): Implement ratioToStructure in TaxEditor
for details see #9507.
We also need an according default formatting for the new character.
Andreas Müller
10:14 PM feature request #9507 (Resolved): Add ratioTo structure to Character
ratioToStructure added.
If ratioTo modifier is also needed open new ticket.
Andreas Müller
10:04 PM feature request #9327 (Resolved): Make taxon secundum reference an original source
Andreas Müller
07:28 PM task #9536 (Closed): Remove old single source citation and microCitation columns for secundum and...
and Classification.source (#9211)
Secundum: #9327
follow up for #9315
~~~

//#9536
...
Andreas Müller
07:24 PM task #9315 (Resolved): Remove old single source citation and microCitation columns
Andreas Müller
07:16 PM bug #9007: Enable i18n support for media description UI
This seems to be partly fixed. I18n support exists for media description and for media title.
@Katja, can you please...
Andreas Müller
06:58 PM feature request #8922: Make setting of sec-Reference configurable when moving synonyms.
Katja, can you have a look if this is a real duplicate for #9340 and, if it is, close it as duplicate? Andreas Müller
06:08 PM Revision 463ef01c (cdm-dataportal): moving method
Andreas Kohlbecker
06:05 PM Revision 121bd2f4 (cdm-dataportal): ref #7599 ref #6866 specimen details tables - using RecordBas...
Andreas Kohlbecker
06:03 PM Revision a5abedb6 (taxeditor): cleanup
Andreas Müller
05:48 PM bug #9535 (Closed): harmonize DefinedTermBase and KeyTerm serializations
Andreas Kohlbecker
05:41 PM bug #9535 (Closed): harmonize DefinedTermBase and KeyTerm serializations
DefinedTermBase and KeyTerms are serialized differently:
DefinedTermBase:
~~~json
{
'representation_L10n': ...
Andreas Kohlbecker
05:48 PM Revision cf27d48e (cdm-dataportal): ref #9535 keyterm message_L10n to representation_L10n - adapt...
Andreas Kohlbecker
05:45 PM Revision dc174713 (cdmlib): ref #7599 ref #6866 adding missing SpecimenOrObservationDTO details
Andreas Kohlbecker
05:44 PM Revision 6fedae05 (cdmlib): ref #9535 keyterm message_L10n to representation_L10n
Andreas Kohlbecker
05:23 PM Revision 6261e826 (taxeditor): cleanup test data
Andreas Müller
05:20 PM Revision 886f6760 (cdm-dataportal): ref #7599 ref #6866 specimen details tables additional data f...
Andreas Kohlbecker
05:06 PM Revision 73d4928f (cdm-vaadin): ref #9327 adapt vaadin to new secundum handling
Andreas Müller
05:05 PM Revision 0cb91465 (cdm-vaadin): cleanup
Andreas Müller
04:42 PM Revision 47420a9f (cdm-dataportal): ref #7599 ref #6866 more specimen details tables - tables may...
Andreas Kohlbecker
04:24 PM Revision 9d24e1ba (cdm-dataportal): ref #7599 ref #6866 more specimen details tables for type des...
Andreas Kohlbecker
02:39 PM Revision 26370e4f (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - res...
Andreas Kohlbecker
02:31 PM Revision f46584fb (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - imp...
Andreas Kohlbecker
02:19 PM feature request #9329: Implement sec reference as original source in dataportal
AK:
diese Werte stehen werden an eu.etaxonomy.cdm.remote.json.util.CardinalityPropertyFilter.setExceptions() überg...
Andreas Müller
01:35 PM bug #9533: NPE when reusing name for new taxon
Andreas Müller wrote:
> When deleting the selected name again I now get another NPE:
Also the free text name is n...
Andreas Müller
01:32 PM bug #9533 (Feedback): NPE when reusing name for new taxon
When deleting the selected name again I now get another NPE:
~~~
last remote method : http://api.cybertaxonomy.or...
Andreas Müller
09:18 AM bug #9533 (Resolved): NPE when reusing name for new taxon
This is fixed, but should be released with an hotifx release.
Please review.
Katja Luther
08:00 AM bug #9533 (Closed): NPE when reusing name for new taxon
Using an existing name for a new taxon results in a NPE because of a missing text in textfield for the name. Katja Luther
01:00 PM Revision 18b47e0d (taxeditor): Merge branch 'hotfix/5.21.1'
jenkins
12:43 PM Revision b3e9aa8e (taxeditor): ref #9533: fix NPE in taxonnode detail element
Katja Luther
12:33 PM Revision 4937095e (taxeditor): Updated version in pom / project files to taxeditor version : 5.21...
jenkins
09:22 AM bug #9534 (New): Filtering of reference type does not work correctly
When enter an 'a' into the drop down for the referencetype and clicking on 'Article' does not work. Katja Luther
08:02 AM Revision 46bdf341 (taxeditor): ref #9533: fix NPE in taxonnode detail element
Katja Luther

03/16/2021

12:20 AM bug #8857: NonUniqueObjectException when creating new taxon
I fully removed saveNewTaxonNode now as it is not in use and is not really save. The createTaxonNode method can be us... Andreas Müller
03:04 PM Revision bb4e2e49 (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - cle...
Andreas Kohlbecker
02:59 PM Revision c407b10a (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - gat...
Andreas Kohlbecker
02:58 PM Revision 4fadd759 (cdm-dataportal): method to check variables for isset & not empty - improvement...
Andreas Kohlbecker
02:13 PM Revision 911995a3 (cdm-dataportal): method to check variables for isset & not empty - detecting w...
Andreas Kohlbecker
01:51 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
the regex is now complete according to the notation found on https://en.wikipedia.org/wiki/Consensus_sequence Andreas Kohlbecker
01:33 PM Revision 5a2e89b6 (cdm-dataportal): ref #7599 ref #6866 specimen details in floating tables - fir...
Andreas Kohlbecker
01:32 PM Revision a85fece4 (cdmlib): ref #7599 gathering date in GatheringDTO
Andreas Kohlbecker
12:14 PM bug #9531 (Resolved): Add Names in OriginalSpelling to the delete configuration
this should be fixed, please review. Katja Luther
12:14 PM Revision 57f556d1 (taxeditor): ref #9531: adapt wizards for name delete
Katja Luther
12:11 PM Revision b2e8f49d (cdmlib): ref #9531: add original spelling to NameDeleteConfig and adapt handli...
Katja Luther
11:32 AM Revision 14f8d7ac (taxeditor): ref #9532: adapt taxonbase propertypath for nameEditor - continue
Katja Luther
10:31 AM Revision 93dfa097 (cdm-dataportal): method to check variables for isset & not empty - improved
Andreas Kohlbecker
10:05 AM Revision a1b229fc (cdm-dataportal): method to check variables for isset & not empty
Andreas Kohlbecker
09:53 AM Revision f84d6d53 (taxeditor): ref #9532: adapt taxonbase propertypath for nameEditor - continue
Katja Luther
09:43 AM Revision 942c70c2 (taxeditor): ref #9532: adapt taxonbase propertypath for nameEditor
Katja Luther
09:40 AM bug #9532 (In Progress): Check whether all data are loaded for NameEditor
The loading of a taxon takes a lot of time, especially the supplemental data view needs several database calls. The p... Katja Luther

03/15/2021

11:11 PM Revision 2af0c8fd (cdm-vaadin): cleanup
Andreas Müller
10:24 PM Revision b8c8c164 (cdm-dataportal): ref #7599 derivative tree view: collapsible unit tree - dotte...
Andreas Kohlbecker
10:18 PM Revision 8898d016 (cdm-dataportal): ref #7599 derivative tree view: collapsible unit tree layout ...
Andreas Kohlbecker
10:10 PM Revision d013aca5 (cdmlib): ref #9327 add first version of update script for v5.22 with update fo...
Andreas Müller
04:06 PM Revision dd3a6e28 (cdm-dataportal): ref #7599 derivative tree view: collapsible unit tree styled ...
Andreas Kohlbecker
02:22 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
With the given uncertainties on additional information like brackets I suggest to use only soft validation (warning b... Andreas Müller
02:19 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
The given regex is not valid anymore for the extended findings we have now on the usage of brackets and Y (and maybe ... Andreas Müller
12:58 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
there was a related ticket already, I add it for discussion informations: #5057 Katja Luther
10:48 AM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
Andreas Müller wrote:
> Is there a reason for this requirment or is it only because we expect sequences to be like t...
Andreas Kohlbecker
01:39 PM Revision 6e6c5a95 (taxeditor): ref #9448: remove SpecimenSearch wizard pages
Katja Luther
12:58 PM Revision 8d0c3f5f (cdm-dataportal): ref #7599 derivative tree view: unit details collapsible
Andreas Kohlbecker
11:11 AM Revision fc5bfc61 (cdm-dataportal): ref #9529 adapting dataportal tests to new bibliographic in-r...
Andreas Kohlbecker
08:48 AM Revision 3b53f511 (cdmlib): fix NPE in cdmlightexport
Katja Luther
08:27 AM bug #9531 (Closed): Add Names in OriginalSpelling to the delete configuration
mail AM:
Es ist so: Arenaria cespitosa Ehrh. hat nicht nur eine Nom. Source sondern ist auch original spelling für...
Katja Luther

03/13/2021

05:37 AM bug #9529: Correct formatting for bibliographic in-reference separation
It looks like we need to update the titleCaches after having this installed. Andreas Müller
05:37 AM bug #9529: Correct formatting for bibliographic in-reference separation
The abbrevCache seems to be missing the dot (in some cases?). See Cichorium endivia - Canary islands (Hansen ref with... Andreas Müller
05:21 AM bug #9529: Correct formatting for bibliographic in-reference separation
NadjaK:
ich bin auch für n-dash, und bei Büchern für die Variante mit Seitenzahlen, das ja auch der Willdenowia-St...
Andreas Müller
04:34 AM bug #9529 (Resolved): Correct formatting for bibliographic in-reference separation
Applied in changeset commit:cdmlib|a7601e2a3c182cbadfed17a9b33ac7c58417c01e. Andreas Müller
04:15 AM bug #9529 (In Progress): Correct formatting for bibliographic in-reference separation
Andreas Müller
02:23 AM bug #9529 (Resolved): Correct formatting for bibliographic in-reference separation
AM:
Vorgeschlagen wurden von Norbert zumindest für Zeitschriften:
* Trennung nur per Punkt
Chenopodiastrum (...
Andreas Müller
05:12 AM bug #8297 (Closed): Fix condensed distribution string for E+M
Andreas Müller
05:11 AM bug #8297: Fix condensed distribution string for E+M
Code cleaned-up as far as time for this existed. A followup ticket with an open issue was created: #9526 Andreas Müller
05:09 AM bug #9525 (Closed): Namerelationship source label is missing sometimes
Looks ok. Andreas Müller
04:37 AM feature request #9530 (Closed): Add pages to bibliographic book sections
for details see #9529 Andreas Müller
04:34 AM Revision a7601e2a (cdmlib): fix #9529 correct separation for bibliographic in-references
Andreas Müller
04:16 AM bug #6960 (In Progress): Improve reference cachestrategy
Andreas Müller
03:58 AM Revision a3c8ad20 (cdmlib): change removeTrailingDot to removeTrailingDots
Andreas Müller
02:26 AM Revision c1bb741f (cdmlib): cleanup
Andreas Müller

03/12/2021

04:32 PM task #9528 (New): synonymy: missplied names sensu with short authorship string
Bei Misapplikationen werden im "sensu"-Teil sämtliche Autoren ohne Initialen aufgeführt. An dieser Stelle würde ein "... Andreas Kohlbecker
03:45 PM bug #9526 (Resolved): Sort order in E+M distribution string should be strictly alphabetic
This should be fixed. Eckhard, can you please review on test server (see link above) it it is ok Andreas Müller
12:05 PM bug #9526 (Closed): Sort order in E+M distribution string should be strictly alphabetic
Currently it is according to vocabulary (which is ordered alphabetically on same levels but ofcourse not for subareas... Andreas Müller
03:32 PM bug #9527: Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAcCgGTtU...
Is there a reason for this requirment or is it only because we expect sequences to be like this.
And why is it a Tax...
Andreas Müller
02:59 PM bug #9527 (New): Consensus Sequence Details: Consensus Sequence 5' -> 3' limit characters to [aAc...
for data to be entered or modified into the "Consensus Sequence 5' -> 3'" text-area the allowed characters, to be typ... Andreas Kohlbecker
01:45 PM Revision b9d4068f (cdm-dataportal): ref #7599 fixing name link of identifications
Andreas Kohlbecker
01:36 PM feature request #7599: treeView for specimen data in dataportal
Open issues:
* the identifications should be clickable with link to name --> link url broken
* sequence data sh...
Andreas Kohlbecker
01:27 PM feature request #9216: Derivate tree view should merge branches to multiple root elements into on...
This feature has only lower priority since we currently don't have any data with multiple originals Andreas Kohlbecker
12:30 PM Revision dd2dcd5e (cdmlib): Change name of AlphabeticallyAscendingNamedAreaComparator to Ascendi...
Andreas Müller
12:06 PM Revision bb365222 (cdmlib): ref #9526
Andreas Müller
10:55 AM Revision b1101440 (cdm-dataportal): upadating jackson-databind dependency
Andreas Kohlbecker
10:48 AM task #9458 (Closed): Consider lower zoom level as default
Andreas Kohlbecker
10:48 AM task #9458 (Resolved): Consider lower zoom level as default
Applied in changeset commit:cdm-dataportal|7931750e5703e7ae42fc8fd9e24de10f98866d90. Andreas Kohlbecker
10:47 AM Revision 7931750e (cdm-dataportal): fix #9458 setting default max zoom level for maps to 13
Andreas Kohlbecker
10:47 AM Revision f4c1810a (cdm-dataportal): fix setting default max zoom level for maps to 13
Andreas Kohlbecker
10:43 AM Revision c0db9246 (cdm-dataportal): removing old map service URL
Andreas Kohlbecker
10:36 AM Revision bd262a5c (cdmlib): fix missing space in homotypic group string
Katja Luther
10:20 AM bug #9213 (Closed): specimen views 'compressed table' and 'derivate tree' fail when no fieldunits...
this is already solved, see http://cichorieae.e-taxonomy.net/portal/cdm_dataportal/taxon/85176c77-e4b6-4899-a08b-e257... Andreas Kohlbecker
10:19 AM Revision 97147b0d (taxeditor): fix handler names after renaming in fragment.e4xmi
Katja Luther
09:25 AM Revision 1a182481 (taxeditor): featureTree -> termTree - adapt MANIFEST.MF
Katja Luther
09:15 AM Revision dff55a57 (taxeditor): featureTree -> termTree - continue
Katja Luther

03/11/2021

03:15 PM Revision 8d389810 (taxeditor): featureTree -> termTree - continue
Katja Luther
03:10 PM Revision 5fec480a (taxeditor): rename featureTree package to termtree
Katja Luther
02:52 PM Revision e92feae0 (taxeditor): adapt character editor to renamed TermTreeComparator
Katja Luther
02:48 PM Revision 8990c8a9 (taxeditor): adapt to new package structure - continue
Katja Luther
02:45 PM Revision b26c4987 (taxeditor): adapt to new package structure - continue
Katja Luther
02:29 PM feature request #5682 (Closed): Implement condensed distribution string for Cuba
I think this is fixed or requirements are not clear anymore. Therefore I close it. Andreas Müller
01:30 PM Revision 513c1824 (cdm-dataportal): updatinfg and improving docu
Andreas Kohlbecker
01:28 PM Revision b8352f21 (cdmlib): move test resources for util package tests
Andreas Müller
01:15 PM Revision 4fe03e8f (taxeditor): adapt to new package structure
Katja Luther
01:10 PM Revision 9864765e (cdmlib): Cleanup
Andreas Müller
01:10 PM Revision ec1bea22 (cdmlib): move CacheUpdater and SortIndexUpdaterWrapper to service.longrunning
Andreas Müller
12:56 PM bug #9525 (Resolved): Namerelationship source label is missing sometimes
Katja Luther
12:55 PM bug #9525 (Closed): Namerelationship source label is missing sometimes
For Namerelationships the label for the source is missing sometimes. Katja Luther
12:46 PM Revision d34a4e38 (taxeditor): remove Remoting from classnames and rename featuretreecomparator -...
Katja Luther
12:43 PM Revision ee305eb1 (taxeditor): avoid widget is disposed exceptions for termsearch
Katja Luther
12:40 PM Revision 2978c511 (taxeditor): remove Remoting from classnames and rename featuretreecomparator -...
Katja Luther
12:39 PM Revision d991bdfe (taxeditor): remove Remoting from classnames and rename featuretreecomparator
Katja Luther
12:32 PM Revision 0345075d (cdmlib): fix issue related to combine service-layer utility packages
Andreas Müller
12:29 PM Revision 4cd3b432 (cdmlib): cleanup
Andreas Müller
12:29 PM Revision 35e1f27a (cdmlib): fix Save/UpdateEntityListener issue
Andreas Müller
12:23 PM Revision a2fec34c (cdmlib): partly revert b691d5a7b70 removal of Save/Update Event Listeners
Andreas Müller
12:06 PM Revision 33227403 (cdm-vaadin): combine service-layer utility packages in vaadin
Andreas Müller
12:03 PM Revision 989daf68 (cdmlib): combine service-layer utility packages
Andreas Müller
11:43 AM Revision 01bb5e1e (cdm-vaadin): rename RoleProbe(r) in vaadin
Andreas Müller
11:38 AM Revision b528081c (cdmlib): rename RoleProbe(r)
Andreas Müller
10:46 AM task #9524 (New): Use non-model objects in database queries for getDistributionInfoFor
The webservice for distribution infos is slow for larger distributions sets. This could be much improved if retrievin... Andreas Müller
10:39 AM Revision b691d5a7 (cdmlib): cleanup and remove SaveEntityListener and SaveOrUpdateEntityListener
Andreas Müller
10:27 AM Revision a33d468f (cdmlib): cleanup
Andreas Müller
10:10 AM Revision c729e881 (cdmlib): ref #8297, ref #9521 test for recursive fallback area recognition in ...
Andreas Müller
10:07 AM Revision 88ffe656 (cdmlib): cleanup
Andreas Müller

03/10/2021

05:22 PM feature request #9002: Find suitable symbols for excluded, unplaced, placement doubtful
WGB:
dazu die Ergänzung, dass dies erst dann angegangen werden sollte, wenn die mit dem Placement vs. Secundum ver...
Andreas Müller
02:41 PM Revision 2d293643 (cdm-server): Merge branch 'release/5.21.0' into develop
jenkins
02:41 PM Revision ebe71965 (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
02:40 PM Revision fe984627 (cdm-server): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
02:34 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
no further hung up incidents on the laptop of andreas kohlbecker.
Still frequent problems on other systems.
Here ...
Andreas Kohlbecker
02:29 PM feature request #9521 (Closed): Fallback areas in textual representation should always stand alone
I close this we can reopen if something does not work. Andreas Müller
02:18 PM Revision a17d517c (cdm-webapp): Merge branch 'release/5.21.0' into develop
jenkins
02:18 PM Revision c0eeb967 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
02:17 PM Revision 0f771957 (cdm-webapp): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
02:17 PM Revision 2e872e73 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.21.0
jenkins
02:17 PM Revision d360557a (cdm-vaadin): Merge branch 'release/5.21.0' into develop
jenkins
02:17 PM Revision 2e23970c (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
02:15 PM Revision 1023f382 (taxeditor): Merge branch 'release/5.21.0' into develop
jenkins
02:15 PM Revision 6e1ac990 (taxeditor): Merge branch 'release/5.21.0'
jenkins
02:14 PM Revision 45dc1b61 (cdm-dataportal): Merge branch 'release/5.21.0' into develop
jenkins
02:14 PM Revision 5ba5f63b (cdm-dataportal): jenkins merging release branch into master (strategy: theirs)
jenkins
02:14 PM Revision c4798de1 (cdm-dataportal): updating poms for branch'release/5.21.0' with non-snapshot ve...
jenkins
02:14 PM Revision b8ad32ba (cdm-vaadin): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
02:14 PM Revision 77318159 (cdm-dataportal): release-preparation: production level css
jenkins
02:14 PM Revision c6791922 (cdm-vaadin): jenkins bumping cdmlib.version to 5.21.0
jenkins
02:13 PM Revision 38c7dd58 (cdmlib): Updating develop poms back to pre merge state
jenkins
02:13 PM Revision 2fa5a819 (cdmlib): Merge branch 'master' into develop
jenkins
02:13 PM Revision 0cadc9f9 (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
02:13 PM Revision 01057299 (cdmlib): Merge branch 'release/5.21.0'
jenkins
01:59 PM Revision f1acd159 (cdmlib): updating poms for branch'release/5.21.0' with non-snapshot versions
jenkins
01:56 PM Revision 5f4c8f64 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.21.0-S...
jenkins
01:56 PM Revision 0975ae43 (cdm-webapp): updating poms for 5.22.0-SNAPSHOT development
jenkins
01:56 PM Revision e664d511 (cdm-webapp): updating poms for 5.21.0 branch with snapshot versions
jenkins
01:56 PM Revision 0761dc5e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.22.0-S...
jenkins
01:47 PM Revision 82d40599 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.22.0-S...
jenkins
12:58 PM Revision c7836dd6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.22...
jenkins
12:57 PM Revision e68970f5 (taxeditor): Updated version in pom / project files to taxeditor version : 5.21...
jenkins
12:57 PM Revision 30411c13 (cdm-vaadin): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:57 PM Revision fdf046c6 (cdm-vaadin): updating poms for 5.21.0 branch with snapshot versions
jenkins
12:57 PM Revision 138c8990 (cdm-vaadin): jenkins bumping cdmlib.version to 5.22.0-SNAPSHOT
jenkins
12:56 PM Revision 8e456fc9 (cdm-dataportal): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:56 PM Revision c5bbbf67 (cdm-server): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:53 PM Revision 81b11e62 (cdmlib): updating poms for 5.22.0-SNAPSHOT development
jenkins
12:52 PM task #9513: "table to div regression": replace scriptler + dynamic parameter plugins
last **TODO**
remove
* Dynamic Parameter Plug-in
* Scriptler Plug-in
Andreas Kohlbecker
12:50 PM task #9513 (Resolved): "table to div regression": replace scriptler + dynamic parameter plugins
Andreas Kohlbecker
12:33 PM bug #9491 (Closed): Order of terms in not order relevant trees
Katja Luther
12:31 PM feature request #9340 (Closed): Workflow support for secundum handling when making synonym a new ...
The check of homotypic synonym secs is moved to a new ticket (#9523), this ticket can be closed. Katja Luther
12:25 PM bug #9520 (Closed): Taxonnode parent merge cascade leads to non-transactional behavior
Seems to work as expected. Katja Luther
11:11 AM Revision d2c49476 (taxeditor): ref #9340: code cleaning
Katja Luther
11:00 AM Revision 5ade3787 (taxeditor): cleanup
Andreas Müller
10:58 AM Revision 468542ec (taxeditor): cleanup
Andreas Müller
10:44 AM Revision 652e719d (taxeditor): fix potential NPE in InverseTermWrapper
Andreas Müller
10:44 AM Revision e36d3242 (taxeditor): cleanup
Andreas Müller
10:42 AM feature request #9523 (New): Check secundum of homotypic synonyms when changing accepted taxon to...
When changing an accepted taxon to a synonym of another accepted taxon, actually only the secundum of the old accepte... Katja Luther
08:49 AM Revision 3f482e4c (taxeditor): ref #9340: add comments
Katja Luther

03/09/2021

07:14 PM Revision 6058f57d (taxeditor): ref #9340: check for different sec in homotypic group
Katja Luther
06:33 PM Revision 2427a5bb (taxeditor): ref #9340: check for different sec in homotypic group
Katja Luther
06:31 PM Revision 13172f31 (cdmlib): ref #9340: correct handling for sec
Katja Luther
06:29 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
For default preference "Keep when same"
Synonym to accepted, keep
syn ref1, homotypic syn ref2, parent ref3 -> ...
Katja Luther
10:00 AM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> If an accepted taxon is converted to a synonym (for an accepted taxon with same sec) its hom...
Katja Luther
05:05 PM feature request #9509 (Closed): IIIF manifest includes media source information
Andreas Kohlbecker
05:05 PM Revision 14ddcf70 (cdmlib): fixing NPE in iiif/ManifestComposer
Andreas Kohlbecker
05:05 PM Revision bd13f8fa (cdmlib): ref #9509 fixing LIEs related to sources and identifiers
Andreas Kohlbecker
05:05 PM Revision bab2a431 (cdmlib): ref #9509 adding identifiers and fixing bug
Andreas Kohlbecker
04:39 PM Revision 184a2a6b (taxeditor): ref #9340: secundum handling if synonym in HG has different sec
Katja Luther
02:42 PM Revision 66806a42 (taxeditor): merge taxon after running operations
Katja Luther
02:09 PM bug #9491 (Feedback): Order of terms in not order relevant trees
Functionality and new code looks looks ok beside this and ticket can be closed. Andreas Müller
12:13 PM bug #9491: Order of terms in not order relevant trees
Can we rename FeatureTreeViewerComparator to TermTreeViewerComparator? "FeatureTree" is deprecated. Maybe we can run ... Andreas Müller
11:57 AM bug #9491: Order of terms in not order relevant trees
Can we delete the commented text in CreateDefinedTermOperation? Andreas Müller
09:49 AM bug #9491 (Resolved): Order of terms in not order relevant trees
Andreas Müller wrote:
> There was still an NPE when editing the title of a tree. I fixed this with a501f1e0 .
>
>...
Katja Luther
01:51 PM Revision 51e33177 (cdmlib): fix test
Katja Luther
01:28 PM Revision 98ccaf43 (cdmlib): add name used in source to cdmlight
Katja Luther
11:17 AM Revision e638fe1d (taxeditor): ref #9340: fix change syn to accept keep sec for homotypic syn
Katja Luther
11:01 AM Revision dca5b6f7 (cdmlib): ref #9340: fix sec handling for homotypic syn when change synonym to ...
Katja Luther
10:42 AM bug #9522: Workflow for reuse name
As the current workflow creates incorrect data we should implement this soon. Andreas Müller
09:28 AM bug #9522 (New): Workflow for reuse name
when an already existing name is reused for a taxon or synonym the following steps should be done:
* check whether...
Katja Luther
10:31 AM Revision 07f58f62 (taxeditor): avoid NPE when classification misses name
Katja Luther
10:08 AM task #9451 (Closed): Cache strategy for classifications is missing
seems to work as expected. Katja Luther
09:59 AM bug #5670 (Closed): Refresh of Taxon Navigator
Andreas Müller wrote:
> Seems to work.
> Only thing I realized, when creating a new taxon via TaxonNode assistant t...
Katja Luther
09:58 AM bug #9512 (Closed): Descriptions being created for individual associations in matrix should have ...
Katja Luther
09:47 AM Revision 03c890d0 (cdmlib): ref #9340: fix sec handling for homotypic syn when moving acc to syn ...
Katja Luther
09:05 AM Revision f42b6825 (cdmlib): ref #9340: fix sec handling for homotypic syn when moving acc to syn ...
Katja Luther
09:02 AM Revision 3c79d7d6 (cdmlib): fix test saveNewTaxonNode
Katja Luther

03/07/2021

11:25 PM Revision 5014c22f (taxeditor): ref #9405, ref #4944 adapt colors for cache protected fields a bit
Andreas Müller
03:31 PM EDIT Platform Etablierung report #9378: Meeting EDIT Platform documentation 2021-02-22
Sollten wir das nicht lieber auf eine WikiSeite schreiben als in ein Ticket? Andreas Müller
12:47 PM feature request #9502: Implement subarea preference rule and fallback areas for areas with comple...
All issues not related to areas with direct multiple parents are fixed with #9521. Now deeper hierarchies with multip... Andreas Müller
12:25 PM feature request #9502: Implement subarea preference rule and fallback areas for areas with comple...
ERS:
mir scheint, Du hast die Probleme nun richtig erfasst und dargestellt.
Zur Krim:
Eigentlich ist gewünsc...
Andreas Müller
12:04 PM task #8671: Distribution in E+M (BM) on different levels
ERS (2020-06-23):
die „Distribution Aggregation“ verhält sich in diesem Fall wie gewollt: ein Unterareal vorhanden...
Andreas Müller
11:39 AM feature request #9500 (In Progress): Allow removing certain distribution status from distribution...
ERS:
Für mich hört es sich plausibel an, für die Behandlung von Subarealen mit dem Status undefined besondere Reg...
Andreas Müller
11:36 AM bug #8297: Fix condensed distribution string for E+M
This should be fixed. Only code cleanup is needed. Andreas Müller
11:36 AM bug #8297: Fix condensed distribution string for E+M
Andreas Müller wrote:
> ... noch ein kleiner Nachtrag: bei der derzeitigen Implementierung kann es auch dazu kommen,...
Andreas Müller
11:30 AM bug #8297: Fix condensed distribution string for E+M
Andreas Müller wrote:
> An open issue:
>
> ... sollen im CondensedDistributionString für die Überareale jeweils n...
Andreas Müller

03/06/2021

10:48 PM Revision 1d41d2cc (cdmlib): ref #9521 handle fallbackarea computation recursively (cont.)
Andreas Müller
08:20 PM Revision 1eba812b (cdmlib): ref #9521 handle fallbackarea computation recursively
Andreas Müller
05:51 PM Revision ad034f89 (cdmlib): ref #9521 fix CCE caused by proxy object
Andreas Müller
05:50 PM Revision bff08cf8 (cdmlib): cleanup
Andreas Müller
04:56 PM Revision ba676069 (cdmlib): cleanup
Andreas Müller
03:41 PM Revision 71abfebc (cdmlib): ref #9521 handle exception in controller (cont.)
Andreas Müller
03:39 PM Revision 6e509e8f (cdmlib): ref #9521 handle exception in controller
Andreas Müller
03:39 PM Revision feebef03 (cdmlib): cleanup
Andreas Müller
01:50 PM feature request #9521 (Resolved): Fallback areas in textual representation should always stand alone
Not yet implemented: show fallback areas only if they have sources (currently they are shown if there is an explicit ... Andreas Müller
12:57 PM feature request #9521 (Closed): Fallback areas in textual representation should always stand alone
Andreas Müller
01:12 PM Revision c160c389 (cdmlib): ref #9521 fallback areas should not appear in textual hierarchy anymo...
Andreas Müller
12:58 PM Revision a04aa53a (cdmlib): ref #9521 fallback areas should not appear in textual hierarchy anymore
Andreas Müller
12:41 PM Revision b848adf1 (cdmlib): cleanup
Andreas Müller
01:11 AM Revision 91626e96 (cdmlib): ref #9500, ref #8297 fix undefined filter (cont.)
Andreas Müller
01:11 AM Revision 7d3af755 (cdmlib): cleanup
Andreas Müller

03/05/2021

12:20 AM Revision 6f6d0ba9 (cdmlib): ref #9500, ref #8297 fix undefined filter
Andreas Müller
12:19 AM Revision 60de16ad (cdmlib): use long instead of int for count
Andreas Müller
12:19 AM Revision 91356769 (cdmlib): cleanup
Andreas Müller
11:48 PM bug #9520 (Resolved): Taxonnode parent merge cascade leads to non-transactional behavior
This needs intensive reviewing as I removed cascading taxon node to parent.
I tested already that the problem itse...
Andreas Müller
06:20 PM bug #9520 (Closed): Taxonnode parent merge cascade leads to non-transactional behavior
If a taxon node is changed and saved the update result also contains its parent and also grandparents up to the class... Andreas Müller
11:39 PM Revision ea17bbe6 (taxeditor): ref #9520 try to fix failing addTaxonNodeCascadeProblem by persist...
Andreas Müller
11:38 PM Revision 761729a1 (taxeditor): invert last commit
Andreas Müller
11:14 PM Revision 0fbf5418 (taxeditor): Try to find the problem with addTaxonNodeCascadeProblem
Andreas Müller
10:53 PM Revision 6611185f (taxeditor): cleanup
Andreas Müller
10:44 PM Revision e657f466 (cdmlib): ref #9500, ref #8297 preliminary add filter for "undefined" status
Andreas Müller
10:41 PM Revision f9e6793c (cdmlib): ref #3816 add distribution status "undefined" UUID to constants
Andreas Müller
10:29 PM Revision c5ec3f4d (cdmlib): ref #9520 fix FeatureNodeServiceImplTest which had incorrect test data
Andreas Müller
10:28 PM Revision 57d188c6 (cdmlib): cleanup
Andreas Müller
09:44 PM Revision 27b9e776 (cdmlib): ref #9520 fix TaxonNodeServiceImplTest after treeIndex is now correct...
Andreas Müller
09:43 PM Revision 16076af1 (cdmlib): ref #9520 move treeIndex update to CdmPreDataChangeListener as SaveOr...
(only when object is explicitly saved or updated) Andreas Müller
09:41 PM Revision fd734dc9 (cdmlib): ref #9520 fix ClassificationServiceImpl und TaxonServiceImplTest for ...
Andreas Müller
09:39 PM Revision 117f7bd2 (cdmlib): ref #9520 fix TaxonNodeNaturalComparator for nodes without treeindex ...
Andreas Müller
09:12 PM Revision a419cd3c (cdmlib): cleanup
Andreas Müller
07:46 PM Revision 200a82b4 (cdmlib): ref #8857 unignore test for #8857
Andreas Müller
07:45 PM Revision ddbbd267 (cdmlib): cleanup
Andreas Müller
06:36 PM feature request #9340 (Feedback): Workflow support for secundum handling when making synonym a ne...
If an accepted taxon is converted to a synonym (for an accepted taxon with same sec) its homotypic synonym having the... Andreas Müller
06:26 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
When testing I sometimes (often at the very beginning after I adapted the test data) got very strange results like pu... Andreas Müller
03:21 PM feature request #9340 (Resolved): Workflow support for secundum handling when making synonym a ne...
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > I have not checked but I guess that th...
Katja Luther
06:22 PM Revision 76512e45 (cdmlib): ref #9520 try to remove cascade from TaxonNode.parent
Andreas Müller
06:10 PM Revision bcd11716 (cdmlib): cleanup
Andreas Müller
05:34 PM Revision 72a9e65f (taxeditor): fix NPE if no activeSession exists
Andreas Müller
04:26 PM bug #9506 (Closed): Rights can not be selected for reuse
This works now. Maybe the server was not restarted when I checked last time. Andreas Müller
04:21 PM bug #8767 (Closed): Workflow support for publish flag
Yes this can be closed. Andreas Müller
03:17 PM bug #8767: Workflow support for publish flag
create follow up ticket for the publish check of the whole homotypic group Katja Luther
03:15 PM bug #8767 (Resolved): Workflow support for publish flag
I think we can close this ticket, I checked all operations mentioned above. Katja Luther
09:39 AM bug #8767: Workflow support for publish flag
Now also MAN -> Synonym works as expected:
acc 1, MAN 0 => Syn 0 (OK)
acc 1, MAN 1 => Syn 1 (OK)
acc 0, MAN 0 =>...
Katja Luther
04:04 PM bug #5670 (Feedback): Refresh of Taxon Navigator
Seems to work.
Only thing I realized, when creating a new taxon via TaxonNode assistant the navigator collapses afte...
Andreas Müller
03:41 PM bug #5670 (Resolved): Refresh of Taxon Navigator
OK, I will review those which work already. Andreas Müller
03:37 PM bug #5670: Refresh of Taxon Navigator
Andreas Müller wrote:
> What is about the other open issues which you did not move to the new ticket yet:
>
> * N...
Katja Luther
03:27 PM bug #5670 (Feedback): Refresh of Taxon Navigator
What is about the other open issues which you did not move to the new ticket yet:
* New Taxon Node / Update Taxon ...
Andreas Müller
02:39 PM bug #5670 (Closed): Refresh of Taxon Navigator
create open issues ticket #9514 Katja Luther
01:59 PM bug #5670: Refresh of Taxon Navigator
I tested NameEditor save and swap and both work well.
Only minor question I have is: can we easily avoid refresh c...
Andreas Müller
12:55 PM bug #5670: Refresh of Taxon Navigator
Andreas Müller wrote:
> Can you please check the lists in the description if they are correct and complete?
>
> (...
Katja Luther
12:43 PM bug #5670 (Feedback): Refresh of Taxon Navigator
Can you please check the lists in the description if they are correct and complete?
(I still have to wait for the ...
Andreas Müller
12:33 PM bug #5670: Refresh of Taxon Navigator
open issues can be taken from callhierarchy of WorkbenchEventConstant.REFRESH_NAVIGATOR Andreas Müller
12:08 PM bug #5670: Refresh of Taxon Navigator
Andreas Müller wrote:
> Now, when changing the name in NameEditor the new taxon is not rearranged within the parent ...
Katja Luther
12:07 PM bug #5670 (Resolved): Refresh of Taxon Navigator
Applied in changeset commit:taxeditor|9f2b6bf28cb2c5ee2cd57937cbde483e929761c0. Katja Luther
11:58 AM bug #5670 (Feedback): Refresh of Taxon Navigator
Now, when changing the name in NameEditor the new taxon is not rearranged within the parent taxon yet.
I think you m...
Andreas Müller
03:47 PM feature request #9519 (New): Add posibilty to add IndividualAssociation descriptions in Facts View
Currently it is not yet possible to set the status of a description manually in the details view. Needs to be discuss... Andreas Müller
03:34 PM bug #9516: Check publish flag of all homotypic synonyms when moving
As this is a follow up ticket we should implement it soon as it is strongly related to the original ticket. Andreas Müller
03:18 PM bug #9516 (New): Check publish flag of all homotypic synonyms when moving
see #8767 Katja Luther
03:30 PM feature request #9514: Open issues for taxon navigator refresh
We should try to handle this in the near future to finish this task which we started in 5.21. Andreas Müller
02:38 PM feature request #9514 (New): Open issues for taxon navigator refresh
* refresh of navigator only if titleCache of the name is changed.
* open the tree for the new position after move ta...
Katja Luther
03:22 PM feature request #9518 (Closed): Add symbol to descriptions having status individual association i...
Similar to literatur descriptions.
Symbol as a first step can be taken from any symbol used in the specimen tree edi...
Andreas Müller
03:18 PM feature request #9517 (New): Descriptions with status "IndividualsAssociation" should only suppor...
Currently all allowed features can be added.
The problem exists in Facts View.
Andreas Müller
03:10 PM feature request #9515 (Closed): Add DescriptionType to TaxonDescription of TaxonAssociations in A...
copied from #9512:
Probably more such descriptions are created by the ABCD import. Katja, can you please check if ...
Katja Luther
03:02 PM bug #9512 (Feedback): Descriptions being created for individual associations in matrix should hav...
This works, though I just realized that the matrix creates such indAss very seldom as it is only relevant for specime... Andreas Müller
11:19 AM bug #9512 (Resolved): Descriptions being created for individual associations in matrix should hav...
Applied in changeset commit:cdmlib|8fea24a9b642e10a89b545ac04352bd582c9835c. Katja Luther
10:49 AM bug #9512 (Closed): Descriptions being created for individual associations in matrix should have ...
Andreas Müller
02:53 PM Revision 5286a7da (taxeditor): ref #5670: avoid CCE in RefreshTreeHandler
Katja Luther
01:41 PM Revision dcb5cd20 (taxeditor): Adapt delete label
Andreas Müller
01:37 PM Revision b9721271 (taxeditor): adapt label
Andreas Müller
01:04 PM Revision dccf74d0 (taxeditor): ref #5670: updating parent node when changing node in taxonnodewizard
Katja Luther
12:28 PM Revision f609e74d (taxeditor): cleanup
Andreas Müller
12:21 PM Revision 6dafedd9 (taxeditor): cleanup
Andreas Müller
12:12 PM Revision dc8182bb (taxeditor): cleanup
Andreas Müller
12:07 PM Revision 9f2b6bf2 (taxeditor): fix #5670: refresh parent node to update the order in navigator
Katja Luther
11:59 AM Revision 425c7a97 (taxeditor): adapt text orientation of unit
Katja Luther
11:54 AM Revision f24708e4 (taxeditor): adapt text orientation of collector, identifier and country row
Katja Luther
11:44 AM bug #7521 (Closed): refresh of taxonnavigator sometimes does not work for moving taxonnodes
Seems to work now Andreas Müller
11:28 AM Revision bf232592 (taxeditor): xxx
Andreas Müller
11:19 AM Revision 8fea24a9 (cdmlib): fix #9512: add type IndividualAssociation to newly created taxonDescr...
Katja Luther
11:07 AM task #9513: "table to div regression": replace scriptler + dynamic parameter plugins
downgrading to v2.263 is not easily possible as this will require to downgrade a couple of plugins also Andreas Kohlbecker
10:55 AM task #9513 (Resolved): "table to div regression": replace scriptler + dynamic parameter plugins
Due to the "table to div regression" the [Configure UI is completely broken after upgrade to 2.264](https://issues.je... Andreas Kohlbecker
10:49 AM Revision 778ddd5e (taxeditor): ref #8767: adapt message for different publish flags in swap acc/syn
Katja Luther
10:13 AM bug #9481 (Closed): ObjectDeletedException when swap syn and accepted with descriptions belonging...
Andreas Müller wrote:
> Works as expected. I did a minor code cleanup. Please check if you think it is correct and c...
Katja Luther
10:11 AM bug #9481 (Feedback): ObjectDeletedException when swap syn and accepted with descriptions belongi...
Works as expected. I did a minor code cleanup. Please check if you think it is correct and close ticket if yes. Andreas Müller
10:06 AM Revision 652454e2 (cdmlib): ref #9481 simplify description copy code
Andreas Müller
10:04 AM Revision ea036daf (cdmlib): cleanup
Andreas Müller
09:04 AM Revision cb7fc5de (taxeditor): label and menu adaptions in character matrix
Katja Luther

03/04/2021

12:37 AM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > Tested MA...
Katja Luther
08:45 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Tested MAN/ppSyn => Syn
> > >
> > >...
Katja Luther
08:40 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > Tested change accepted to synonym
> >...
Andreas Müller
08:37 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
> > Tested MAN/ppSyn => Syn
> >
> > acc 1, MAN 0 => Syn 0 (OK)
> > ...
Andreas Müller
07:10 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Andreas Müller wrote:
>
> > Katja, can you do the same check for "move accepted to new pare...
Katja Luther
07:04 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Katja, can you do the same check for "move accepted to new parent". I don't if this is alr...
Katja Luther
06:17 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Andreas Müller wrote:
> > Tested change accepted to synonym
> >
> > Old parent 1, old ac...
Katja Luther
06:06 PM bug #8767: Workflow support for publish flag
Katja, can you do the same check for "move accepted to new parent". I don't if this is already fully fixed, committed... Andreas Müller
06:04 PM bug #8767: Workflow support for publish flag
Tested move synonym/homotypic group to another taxon
Old acc 1, old syn 1, new acc 1 => new syn 1 w/o warning (OK)...
Andreas Müller
05:48 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Tested MAN/ppSyn => Syn
>
> acc 1, MAN 0 => Syn 0 (OK)
> acc 1, MAN 1 => Syn 0 (FALSE)
...
Katja Luther
05:44 PM bug #8767: Workflow support for publish flag
change synonym to accepted taxon
Old acc 1, old syn 1, new parent 1 => new acc 1 w/o warning (OK)
Old acc 1, old ...
Andreas Müller
05:35 PM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Tested change accepted to synonym
>
> Old parent 1, old acc 1, new acc 1 => new syn 0, w/...
Andreas Müller
05:33 PM bug #8767: Workflow support for publish flag
Tested change accepted to synonym
Old parent 1, old acc 1, new acc 1 => new syn 0, w/o warning (FALSE, should be 1...
Andreas Müller
05:10 PM bug #8767: Workflow support for publish flag
Tested MAN/ppSyn => Syn
acc 1, MAN 0 => Syn 0 (OK)
acc 1, MAN 1 => Syn 0 (FALSE)
acc 0, MAN 0 => Syn 0 (OK)
acc...
Andreas Müller
05:00 PM bug #8767: Workflow support for publish flag
Tested Syn => MAN/ppSyn
acc 1, syn 0 => MAN 0 (OK)
acc 0, syn 1 => MAN 1 (OK)
acc 0, syn 0 => MAN 0 (OK)
Andreas Müller
04:17 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> For operations like swap I do not see the need to test for the parent if the old and the new a...
Andreas Müller
04:10 PM bug #8767: Workflow support for publish flag
For operations like swap I do not see the need to test for the parent if the old and the new accepted have the same p... Katja Luther
03:37 PM bug #8767: Workflow support for publish flag
Katja, can you please test correct functionality for each of the above operations and leave a message in this ticket ... Andreas Müller
03:35 PM bug #8767 (Feedback): Workflow support for publish flag
Testing swap:
* if parent taxon has state 1 and old+new taxon state 2 no warning appears
* if warning appears it ...
Andreas Müller
11:17 PM Revision b8480a47 (cdmlib): fix NPE
Katja Luther
11:08 PM Revision 527e30cd (taxeditor): set sourcelabel after creating controls
Katja Luther
10:46 PM Revision ea24e836 (cdmlib): ref #9340: fix handling of secundum for synonyms
Katja Luther
09:28 PM Revision 686ed38c (cdmlib): ref #9340: same sec handling for all synonyms of the moved accepted t...
Katja Luther
09:25 PM Revision 733fcb2d (taxeditor): ref #9340: correct handling of sec for moving one more taxa to syn...
Katja Luther
08:47 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Katja Luther wrote:
> Andreas Müller wrote:
> > I have not checked but I guess that the secundum of other synonyms ...
Andreas Müller
08:36 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> I have not checked but I guess that the secundum of other synonyms in the homotypic group is...
Katja Luther
08:13 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
I have not checked but I guess that the secundum of other synonyms in the homotypic group is probably not checked yet... Andreas Müller
07:59 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> I test all other preferences (except for default preference) for change "synonym to accepted...
Andreas Müller
07:46 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
I test all other preferences (except for default preference) for change "synonym to accepted taxon" and "change taxon... Andreas Müller
07:39 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Andreas Müller wrote:
> The preference says
>
> ![](picture937-1.png)
>
> Is it true that it is only for thes...
Katja Luther
07:36 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
The preference says
![](picture937-1.png)
Is it true that it is only for these 2 operations or should we adapt...
Andreas Müller
07:33 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Katja, can you please run the same type of tests for
* move synonym to another taxon
* move accepted to new pare...
Andreas Müller
07:32 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Further tested change accepted to synonym (with default preference)
Old parent sec2, oldAcc null, newAcc sec1 => w...
Andreas Müller
07:25 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested change synonym to accepted taxon (with default preference)
OldAcc sec1, oldSyn sec1, newParent sec1 => newA...
Andreas Müller
06:46 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested change accepted to synonym (with default preference)
Old parent sec1, oldAcc sec1, newAcc sec1 => warning (...
Andreas Müller
04:09 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Also the message seems to mention the old accepted taxon but I think finally we decided that here the old accepted ta... Andreas Müller
04:07 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested: Syn => Acc
![](picture023-1.png)
The dialogue title and the message seem to be mixed up, they should be...
Andreas Müller
03:59 PM feature request #9340 (Feedback): Workflow support for secundum handling when making synonym a ne...
Generally use se**c**undum not sekundum in German dialogues (and elsewhere) as secundum is Latin. I don't think there... Andreas Müller
03:49 PM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Tested: Syn => MAN and back
In step 1 sec was deleted (OK)
In step 2 sec was added (taken from accepted) - (OK, ...
Andreas Müller
08:23 PM Revision 7c992431 (taxeditor): smaller label issues
Katja Luther
08:19 PM Revision f9c172a1 (taxeditor): add translation for secundum reference pref page label
Katja Luther
07:37 PM Revision 5f6b535c (cdmlib): ref #9340: fix error for keepWhenSame
Katja Luther
07:09 PM Revision 7ff96e13 (taxeditor): ref #8767: fix warning for same publish flag when moving taxa
Katja Luther
05:36 PM Revision c3a27807 (taxeditor): label issues in term editors
Katja Luther
05:34 PM Revision 61e77456 (taxeditor): ref #8767: check for publish when moving taxon
Katja Luther
05:16 PM Revision 60558f86 (cdmlib): ref #8767: keep publish flag for MAN -> syn
Katja Luther
05:15 PM Revision db1b9b38 (cdmlib): ref #8767: keep publish flag for MAN -> syn
Katja Luther
05:03 PM Revision f92f7076 (cdmlib): ref #8767: add publish status to taxonnodedto
Katja Luther
04:20 PM Revision eaf81585 (taxeditor): ref #9340: correct message
Katja Luther
04:18 PM Revision 028f99e1 (taxeditor): ref #9340: title and message where mixed up
Katja Luther
04:09 PM Revision 78cc32b1 (taxeditor): ref #9340: change sekundum to secundum
Katja Luther
04:04 PM Revision ceda623b (taxeditor): ref #9340: change sekundum to secundum
Katja Luther
03:55 PM Revision 807ef200 (taxeditor): small changes in matrix menu
Katja Luther
03:51 PM bug #9481: ObjectDeletedException when swap syn and accepted with descriptions belonging to a des...
fixed. Katja Luther
03:50 PM bug #9481 (Resolved): ObjectDeletedException when swap syn and accepted with descriptions belongi...
Applied in changeset commit:cdmlib|64c76cb2c3937cf979045741195fae0ade7013a6. Katja Luther
03:08 PM bug #9481 (Feedback): ObjectDeletedException when swap syn and accepted with descriptions belongi...
No exception anymore, but it looks like the descriptions are duplicated now.
I ran on Arenaria serpyllifolia Bourg...
Andreas Müller
03:50 PM Revision 64c76cb2 (cdmlib): fix #9481: fix doubled descriptions
Katja Luther
02:59 PM Revision 63583e76 (cdmlib): ref 9506: search also for abbrevText and show only the parts available
Katja Luther
02:28 PM bug #7091 (Closed): Add uri field and abbreviatedText to Righs in supplemental data
seems to work as expected. Andreas Müller
11:36 AM bug #7091 (Resolved): Add uri field and abbreviatedText to Righs in supplemental data
this should be fixed. Katja Luther
10:05 AM bug #7091: Add uri field and abbreviatedText to Righs in supplemental data
Licences become more important in future (Chichorieae has such data) so we should try to implement it soon Andreas Müller
02:25 PM bug #9506 (Feedback): Rights can not be selected for reuse
Katja Luther wrote:
> Andreas Müller wrote:
> > We should also include abbrev and uri if data is not empty (see #70...
Andreas Müller
02:20 PM bug #9506: Rights can not be selected for reuse
Katja Luther wrote:
> Andreas Müller wrote:
> > Empty values are not handled correctly:
> >
> > ![](picture205-1...
Andreas Müller
11:20 AM bug #9506 (Resolved): Rights can not be selected for reuse
Andreas Müller wrote:
> We should also include abbrev and uri if data is not empty (see #7091)
this is fixed.
Katja Luther
11:08 AM bug #9506 (In Progress): Rights can not be selected for reuse
Andreas Müller wrote:
> Empty values are not handled correctly:
>
> ![](picture205-1.png)
>
> I think empty or...
Katja Luther
10:12 AM bug #9506: Rights can not be selected for reuse
Finally we could add a filter to search only on certain rights types. But this might be another ticket. Andreas Müller
10:11 AM bug #9506: Rights can not be selected for reuse
We should also include abbrev and uri if data is not empty (see #7091) Andreas Müller
10:09 AM bug #9506 (Feedback): Rights can not be selected for reuse
Empty values are not handled correctly:
![](picture205-1.png)
I think empty or null values should not show up i...
Andreas Müller
01:07 PM bug #9510: Improve label for descriptions created via DDS matrix
... ich sehe gerade, dass die obige Labeldiskussion v.a. fürs Portal gedacht war, dennoch vielleicht auch passend für... Andreas Müller
01:03 PM bug #9510: Improve label for descriptions created via DDS matrix
Auch das Label der Specimen description selber entspricht noch nicht ganz dem, wie wir es mal besprochen haben:
...
Andreas Müller
10:51 AM bug #9510: Improve label for descriptions created via DDS matrix
The above suggestion are only meant as first ideas. Please feel free to suggest/find better labels. Andreas Müller
10:50 AM bug #9510 (New): Improve label for descriptions created via DDS matrix
The automatically created label for a new "literature" description is something like {name of DDS}: Factual data set ... Andreas Müller
11:38 AM bug #8760: Presentation and linking of molecular data in specimen table too unclear
A current working link: http://campanula.e-taxonomy.net/cdm_dataportal/taxon/2e3aa801-7307-409c-bd39-d825f5f1e031/spe... Andreas Müller
11:35 AM Revision 0fe8c1ba (taxeditor): ref #7091: add abbrev. text and uri to rights
Katja Luther
11:17 AM Revision 9f92498d (cdmlib): ref 9506: show uri and abbrev text when available
Katja Luther
11:07 AM Revision 14c8d1f0 (cdmlib): ref 9506: do not show empty rights in rights selection dialog
Katja Luther
11:02 AM Revision 50ddfe8e (cdm-dataportal): installinv universalviewer version 3.1.1. with patch for UV b...
Andreas Kohlbecker
11:01 AM feature request #9511 (New): Move specimens/individual associations for matrix into same description
If one adds a new specimen description in the matrix for a specimen that is not yet attached as individuals associati... Andreas Müller
10:35 AM bug #9488 (Closed): Show details of description in character matrix
This works now. Andreas Müller
10:01 AM bug #6688 (Duplicate): Rights do not show up in rights search if no text is given
duplicates #9506 Andreas Müller

03/03/2021

06:51 PM feature request #9509: IIIF manifest includes media source information
implemented, formatting of the output my need further improvement Andreas Kohlbecker
06:49 PM feature request #9509 (Resolved): IIIF manifest includes media source information
Applied in changeset commit:cdmlib|5a1bde2d875ebc302cae81e09f994cae51877b67. Andreas Kohlbecker
06:23 PM feature request #9509 (Closed): IIIF manifest includes media source information
source data of media entities need to be added to the IIIF manifests.
This need to be implemented into the `Manife...
Andreas Kohlbecker
06:49 PM Revision 5a1bde2d (cdmlib): fix #9509 adding media.source information to iiif manifest
Andreas Kohlbecker
05:54 PM feature request #9508 (New): OpenID Connect 1.0 aurthentication with ORCID
ORCID offers an OpenID Connect 1.0 (a simple identity layer on top of the OAuth 2.0 protocol) service which allows to... Andreas Kohlbecker
02:24 PM bug #9488 (Resolved): Show details of description in character matrix
Andreas Müller wrote:
> Adding a source was possible but I could not persist the change. After reopening the changes...
Katja Luther
02:01 PM bug #9506: Rights can not be selected for reuse
is this already for review? Andreas Müller
12:22 PM bug #9506: Rights can not be selected for reuse
now the search is on text and agent.titlecache and the label contains {text} - {agent.titleCache} - {type.titleCache} Katja Luther
12:20 PM bug #9506 (Resolved): Rights can not be selected for reuse
Applied in changeset commit:cdmlib|90f0f3376dce0188f40dad490274d666ad82c2c5. Katja Luther
12:44 PM Revision daa29c68 (taxeditor): ref #9340: add sec check for move synonym to another taxon
Katja Luther
12:14 PM Revision 90f0f337 (cdmlib): fix #9506: the rights were filtered by text, this fixed now
Katja Luther
11:30 AM bug #9481 (Resolved): ObjectDeletedException when swap syn and accepted with descriptions belongi...
yes please review Katja Luther
11:29 AM bug #9481: ObjectDeletedException when swap syn and accepted with descriptions belonging to a des...
is this for review? Andreas Müller
11:18 AM Revision 166d445c (taxeditor): ref #9488: add workbench constants
Katja Luther
11:10 AM Revision 3cccbe35 (taxeditor): ref #9488: fix persisting of changed descriptions
Katja Luther
10:38 AM feature request #9507: Add ratioTo structure to Character
NK:
Es gibt eine Reihe von Properties, die für Relationen zwischen Strukturen genutzt werden und zu denen in unser...
Andreas Müller
10:36 AM feature request #9507 (Closed): Add ratioTo structure to Character
Some characters handle the ratio between two structures, e.g. length ratio between corolla and calyx.
For this we ...
Andreas Müller
10:02 AM Revision b41b2728 (taxeditor): add exception handling in CachingHttpInvokerProxyFactoryBean
Andreas Müller
08:27 AM feature request #9473: Support moving images to new taxa similar to facts
This is critical as we need it for the new media handling strategy Andreas Müller

03/02/2021

11:10 PM bug #9506: Rights can not be selected for reuse
The problem is probably that for copyrights usually only an agent and the rights type is given, but no text.
So the ...
Andreas Müller
10:35 PM bug #9506 (Closed): Rights can not be selected for reuse
The selection dialog for rights does not show any existing data even if "*" is entered.
This happened in the cypru...
Andreas Müller
10:09 PM bug #9488 (Feedback): Show details of description in character matrix
Adding a source was possible but I could not persist the change. After reopening the changes were missing.
This is...
Andreas Müller
09:40 PM feature request #3816 (Closed): Create "Undefined" status and choose it for NULL status
Fixed. The update script is handled in separat ticket #9505. Andreas Müller
09:39 PM feature request #9505 (New): Set missing distribution status to "undefined"
copied from #3816
Before, check which data are affected and think about if it is really necessary.
Andreas Müller
09:33 PM bug #9491 (Feedback): Order of terms in not order relevant trees
There was still an NPE when editing the title of a tree. I fixed this with a501f1e0 .
It generally works. Only I d...
Andreas Müller
09:21 PM bug #9504 (Closed): Changing term tree title is not persisted
If I create a new term tree and change the title before saving the title is reset to the default title after saving Andreas Müller
09:15 PM feature request #9499 (Closed): Make isAbsent editable in DetailsView
This is fixed though "should be disabled for mangaged terms" is not yet implemented. But it seems that this is not ye... Andreas Müller
03:18 PM feature request #9499 (Resolved): Make isAbsent editable in DetailsView
Applied in changeset commit:taxeditor|a524e7d8a97c00b9274b767e73f75d0a47627da0. Katja Luther
02:11 PM feature request #9499 (Closed): Make isAbsent editable in DetailsView
For PresenceAbsenceTerm the isAbsent attribute is not yet editable and visible.
As idInVoc (and others) editing sh...
Andreas Müller
08:57 PM Revision a501f1e0 (taxeditor): ref #9491 fix NPE in comparator
Andreas Müller
08:57 PM Revision f0f4b490 (taxeditor): cleanup
Andreas Müller
08:38 PM bug #7107: "Omit level" (TDWG Level2) in distribution hierarchy should not supress distributions ...
AM:
ich sehe gerade auf http://www.europlusmed.org/cdm_dataportal/taxon/6a8e85bd-5e52-4ae2-9444-99128c87a672, dass...
Andreas Müller
08:19 PM feature request #9502: Implement subarea preference rule and fallback areas for areas with comple...
AM:
Problematisch sind derzeit ja noch die Fallback-Areale, die viele Hierarchiestufen haben oder überlappen. Also...
Andreas Müller
07:31 PM feature request #9502 (New): Implement subarea preference rule and fallback areas for areas with ...
#5050 defines the subarea preference rule and also describes implements it for areas Ju, Cz, IJ and LS which are rela... Andreas Müller
08:17 PM feature request #9500: Allow removing certain distribution status from distribution publication
AM:
Und noch etwas bezüglich undefined:
Im alten Portal werden diese Status ja auch grundsätzlich nicht mitbrüc...
Andreas Müller
08:15 PM feature request #9500: Allow removing certain distribution status from distribution publication
AM:
In einigen Fällen, und insbesondere in den Fällen, bei denen die Unterareale nur eine undefined Verbreitung ha...
Andreas Müller
03:40 PM feature request #9500 (In Progress): Allow removing certain distribution status from distribution...
from #8858#note-14
An even better solution might be to use a term tree for filtering an ordering the distribution ...
Andreas Müller
08:14 PM bug #8297: Fix condensed distribution string for E+M
An open issue:
... sollen im CondensedDistributionString für die Überareale jeweils nur die Unterarealstatus ausge...
Andreas Müller
08:12 PM task #9501: Find inconsistent higher area distribution status data in E+M
AM:
Ein ähnlicher Fall, der mir nicht ganz klar ist, ist der, wenn es für das Überareal einen Status mit höherer P...
Andreas Müller
07:03 PM task #9501: Find inconsistent higher area distribution status data in E+M
The results of the query were sent to ERS today. Andreas Müller
07:03 PM task #9501 (New): Find inconsistent higher area distribution status data in E+M
The distribution status of a higher area (area with subareas) should usually not have a higher status then the highes... Andreas Müller
07:59 PM feature request #9484 (Rejected): Distinguish default hidden/fallback area handling from empty li...
In #9502 it was decided that hidden and fallback areas should better be handled by term trees so the current ticket i... Andreas Müller
07:58 PM feature request #9503 (New): Handle term tree of areas and distribution status for distributionIn...
This is blocked by #9500 and/or #9502.
See the description there for further information.
Andreas Müller
07:51 PM bug #9486 (Duplicate): Fallback areas not handled in area hierarchy are not showing up correctly ...
This is more or less a duplicate for #9502. Andreas Müller
07:45 PM feature request #3904 (Closed): EuroMed: Implement filtering rules for distributions
All subtasks and related are closed. Open issues are handled in follow up tickets #9500 (for status) and #9502 (for a... Andreas Müller
07:42 PM feature request #5050 (Closed): revise the subAreaPreference rule for filtering Distributions
Generally this is fixed. The subarea preference is implemented for map creation. Some open issues with fallback areas... Andreas Müller
07:33 PM task #8671 (Rejected): Distribution in E+M (BM) on different levels
As the rule is clear that supra-area information should not be shown on maps as long as subarea information is avail... Andreas Müller
07:10 PM bug #8670 (Closed): Unwanted distribution aggregation/display on 2 levels
As there were no complaints about this issue anymore since the ticket was resolved I close it. Open new ticket for an... Andreas Müller
03:41 PM bug #8858 (Closed): Ordering of distribution status 'undefined' is not correct in E+M
The new implementation works as expected. The result is for Talinum paniculatum on test is "-● -Md(??M) [aAu(A) pAz(a... Andreas Müller
01:36 PM bug #8858: Ordering of distribution status 'undefined' is not correct in E+M
Applied in changeset commit:cdmlib|4dccf2d61ae938ff7638aa262de483068859fd3b. Andreas Müller
01:34 PM bug #8858 (Resolved): Ordering of distribution status 'undefined' is not correct in E+M
The reason why the first fix didn't work is that PresenceAbsenceTerm had it's own compareTo method, including an isPr... Andreas Müller
03:18 PM Revision a524e7d8 (taxeditor): fix #9499: add isAbsent checkBox to details view
Katja Luther
02:15 PM bug #9475 (Closed): NameTypeDesignations for existing names in other nom acts can not be created
Andreas Kohlbecker
01:36 PM Revision 4dccf2d6 (cdmlib): fix #8858 Improve presence/absence handling for PresenceAbsenceTerm.c...
Andreas Müller
01:36 PM Revision 372d9011 (cdmlib): cleanup
Andreas Müller
12:15 PM feature request #9494 (Closed): Improve UI: Selection of ranks in Name Editor
closing as duplicate Andreas Kohlbecker
09:43 AM Revision d170d72d (cdmlib): ref #8767: fix publish flag when change man to syn
Katja Luther
09:36 AM bug #9483 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trin...
Andreas Kohlbecker
09:36 AM feature request #8981 (Closed): Improve NameStatus in UI
Andreas Kohlbecker
09:34 AM Revision 24398f04 (cdmlib): minor
Andreas Müller
09:33 AM feature request #9498 (New): User self password recovery service
this is needed for the cdm-vaadin login dialog tab "Password Recovery " Andreas Kohlbecker
09:32 AM feature request #9497 (New): User self registration service
this is needed for the cdm-vaadin login dialog tab "Register" Andreas Kohlbecker
09:03 AM Revision 5e7f74f5 (taxeditor): smaller label issues
Katja Luther

03/01/2021

11:36 PM Revision 56fcd434 (cdmlib): cleanup
Andreas Müller
10:10 PM feature request #9496 (New): Handling fossil taxa
unsure how to do this.
PhycoBank need a "fossil" flag.
Where to place this?
In databases, a name is flaged as f...
Wolf-Henning Kusber
10:06 PM feature request #9495 (New): Handling ISSN and ISBN if a publication is hard copy and electronic
ISSN should be supplemented by a eISSN field
ISBN should be supplemented by a eISBN field
Field name to be discus...
Wolf-Henning Kusber
10:01 PM feature request #9494 (Closed): Improve UI: Selection of ranks in Name Editor
The normal usecase is that 95% of name registrations are using just 5 ranks.
Some ranks in the selection are irrelev...
Wolf-Henning Kusber
09:46 PM bug #9493 (New): Duplicate of species epithet when an existing species name is used for typification
After selection of an existing species name for typification, the selection of species epithets in the Name editor sh... Wolf-Henning Kusber
07:50 PM feature request #9492: Improve NameStatus in UI - new
"Icn Shenzhen 2017" is not needed for PhycoBank
ICN is not the title
the year of publication is 2018
This is a...
Wolf-Henning Kusber
07:19 PM feature request #9492 (New): Improve NameStatus in UI - new
Follow up zu #8981
Currently the fields are shown:
Status type // Reference // Reference detail // Rule considere...
Wolf-Henning Kusber
07:21 PM feature request #8981: Improve NameStatus in UI
This ticket can be closed.
new ticket: #9492
Wolf-Henning Kusber
06:40 PM bug #9491 (Resolved): Order of terms in not order relevant trees
Changed to client side ordering because the server does not know about the preference "Show Id in Vocabulary" for the... Katja Luther
05:01 PM bug #9491 (Closed): Order of terms in not order relevant trees
The order of not order relevant trees in term tree editors should be alphabetic. Katja Luther
06:40 PM Revision 1a4389ec (taxeditor): ref #9491: do the ordering on editor side - code cleaning
Katja Luther
06:31 PM Revision 0073b027 (cdmlib): ref #9491: revert changes in cdmlib
Katja Luther
06:26 PM Revision 85f422a4 (taxeditor): ref #9491: do the ordering on editor side
Katja Luther
06:20 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
The name type section works for new genera names as well as for expisting names as expected.
The recorded error was ...
Wolf-Henning Kusber
04:06 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
I cant see any problem.
Here you can see me choosing the section (non sense data) of the typifying authors:
![]...
Andreas Kohlbecker
05:58 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
Trinominals can be created and stored. If this is due to #9483 this ticket can be closed. Wolf-Henning Kusber
04:50 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
new ticket for possibly better solution #9490 Andreas Kohlbecker
03:11 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
Hi Henning, this issue can be reviewed again. Andreas Kohlbecker
03:08 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
Usually we are passing initStrategies to the service methods in order to initialize associated entities. In this case... Andreas Kohlbecker
05:50 PM bug #9485 (Closed): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
Andreas Kohlbecker
05:43 PM bug #9485: TaxonNamePopupEditor: StackOverflow on selecting ICN reference
works as expected, ticket can be closed. Wolf-Henning Kusber
10:38 AM bug #9485 (Resolved): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
Applied in changeset commit:cdm-vaadin|3035e8761cb98d17cd8c2874305069953d656310. Andreas Kohlbecker
08:23 AM bug #9485 (Closed): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
Selection of a ICN reference causes an error

Name editor, new name goto nom.inval., select nom.inval.
Sele...
Andreas Kohlbecker
05:35 PM Revision 520afc6d (cdmlib): fix #9483 better solution by using rankClass only - restoring chanche...
Andreas Kohlbecker
05:23 PM Revision 6d804466 (cdmlib): fix #9483 better solution by using rankClass only
Andreas Kohlbecker
05:04 PM bug #9488 (Resolved): Show details of description in character matrix
this should be fixed, please review Katja Luther
04:09 PM bug #9488 (Closed): Show details of description in character matrix
mail NK:
wenn ich in der Matrix mit dem Kontext-Menu zu einem Taxon "Create literature description" hinzufüge, bek...
Katja Luther
04:51 PM bug #8312 (Closed): Test, fix, improve and run Transmission engine for E+M
This should be fixed with the implementation of transmission engine and following unified description aggregation as ... Andreas Müller
04:50 PM task #9490 (Closed): avoid rank entity in TaxonNameParts
... vielleicht kann man den auch loswerden .... rankSpecificNamePart
kann man auch sofort bei der Bildung des DTO a...
Andreas Kohlbecker
04:43 PM feature request #2625 (Closed): [E+M Overview] Data aggregation functionalities for E+M (Transmis...
This should be fixed with the transmission engine implementations (see subtasks) and with the implementation of descr... Andreas Müller
04:19 PM Revision 48671d79 (cdmlib): add _ to label to add the new term at the beginning of the terms list
Katja Luther
04:13 PM Revision 97eff560 (cdmlib): cleanup
Andreas Müller
04:12 PM bug #9489 (New): Fix header of character matrix for hierarchical characters
mail NK:
Matrix header: für den Matrix header in der obersten Hierarchie-Ebene, also 1. Spaltenüberschiriftenzeile...
Katja Luther
04:10 PM Revision 7e689eb5 (taxeditor): ref #9488: fix details view for descriptions in character matrix
Katja Luther
04:09 PM bug #9470 (Closed): CollectionDTO constructor prevent from circles
Andreas Kohlbecker
04:07 PM Revision 683c7385 (cdm-vaadin): fixing bug in NameTypeDesignationPresenter
Andreas Kohlbecker
03:24 PM feature request #9487 (New): Split state (and/or other big) vocabularies
mail NK:
Das Handling großer Vokabulare (States!) ist immer noch recht mühselig, wegen langer Lade- und Speicherzeit...
Katja Luther
03:21 PM Revision a05e4acf (cdmlib): fix #9483 initializing rank.vocabulary in the TaxonNameParts construc...
Andreas Kohlbecker
03:21 PM Revision cb271641 (cdmlib): cleanup
Andreas Kohlbecker
03:20 PM Revision b858a126 (cdmlib): children of termnodedto should be ordered alphabetically when not ord...
Katja Luther
03:20 PM Revision e9f80908 (cdmlib): children of termnodedto should be ordered alphabetically when not ord...
Katja Luther
03:18 PM bug #9476 (Closed): SpecimenTypeDesignations for existing names in other nom acts can not be created
Andreas Kohlbecker
03:10 PM Revision d10e9a39 (cdmlib): fix #9483 initializing rank.vocabulary in the TaxonNameParts constructor
Andreas Kohlbecker
02:19 PM bug #8310 (Closed): Issues to solve in E+M shapefile
I think generally we can close this ticket. Open and new issues can be handled in separate tickets like #9367. Open i... Andreas Müller
12:51 PM bug #8310: Issues to solve in E+M shapefile
There is another open issue reported in #9367 Andreas Müller
02:08 PM bug #4409: fallback areas are not adressable in the shape file
Andreas Müller wrote:
> This seems to be fully fixed except for the Baltic states issue handled in #9367. TCS is now...
Andreas Müller
01:25 PM bug #4409 (Closed): fallback areas are not adressable in the shape file
This seems to be fully fixed except for the Baltic states issue handled in #9367. TCS is now shown as 1 area if no su... Andreas Müller
11:05 AM bug #4409 (Resolved): fallback areas are not adressable in the shape file
Andreas Müller wrote:
> This should be fixed now. Either with #8858 or already before. Open issues are otherwise han...
Andreas Müller
10:59 AM bug #4409 (Closed): fallback areas are not adressable in the shape file
This should be fixed now. Either with #8858 or already before. Open issues are otherwise handled in #8297 and related... Andreas Müller
02:05 PM bug #9486 (Duplicate): Fallback areas not handled in area hierarchy are not showing up correctly ...
followup from #4409
In #4409 correct handling of fallback areas like Ju, Cz, IJ and LS in maps have been fixed. Un...
Andreas Müller
01:53 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
log from a hangup:
~~~
Mar 01 13:40:35 edit-community systemd[1]: Starting user-0.slice.
Mar 01 13:40:35 edit-co...
Andreas Kohlbecker
01:49 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
hung up still happen
attempt to find the cause by more loggin by logging the post-receive script execution with sy...
Andreas Kohlbecker
01:40 PM Revision a5cc95ce (cdmlib): children of termnodedto should be ordered alphabetically when not ord...
Katja Luther
01:13 PM bug #9478 (Closed): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow fa...
no regression occurs in the case described in #7245
no duplicate of #8249
and fully solved
Andreas Kohlbecker
12:34 PM Revision b0f33c74 (cdmlib): ref #9481: move the descriptions to the new taxon to avoid DDS when d...
Katja Luther
11:33 AM bug #9480 (Closed): SpecimenTypeDesignationEditor: designationReference --> new should be limited...
Andreas Kohlbecker
10:38 AM Revision 3035e876 (cdm-vaadin): fix #9485 fixing stack overflow on setting component error
Andreas Kohlbecker
09:50 AM bug #8297: Fix condensed distribution string for E+M
AM:
auf introduced: doubtfully introduced (perhaps cultivated only) bist du noch nicht explizit eingegangen in de...
Andreas Müller

02/27/2021

08:27 AM bug #8297 (Resolved): Fix condensed distribution string for E+M
This should be fixed now and can be reviewed on test or on production after the next release Andreas Müller
08:25 AM bug #8858 (Closed): Ordering of distribution status 'undefined' is not correct in E+M
Andreas Müller wrote:
> Another solution is implementing #3816
This solution finally has been implemented. The st...
Andreas Müller

02/26/2021

11:44 PM Revision 455700e0 (cdmlib): ref #8297 handle fallback areas correctly in CondensedDistributionCom...
Andreas Müller
07:06 PM Revision 58c7c564 (taxeditor): enable service time logging
Katja Luther
07:05 PM Revision 2b5b8997 (cdmlib): ref #8297, ref #9484 temporarily handle isEmpty similar to use defaul...
Andreas Müller
07:03 PM feature request #9484 (Rejected): Distinguish default hidden/fallback area handling from empty li...
The current default CondensedDistributionConfiguration uses the euro+med marker types for hidden and fallback areas a... Andreas Müller
06:47 PM Revision 492fde02 (taxeditor): ref #8767: label issues
Katja Luther
06:23 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
existing genus name selected, fine.
Name type designation editor opened, fine.
Type selected, fine.
Species name ...
Wolf-Henning Kusber
03:42 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
please review Andreas Kohlbecker
06:17 PM bug #5206 (Closed): Status symbols in condensed distribution string repeated for subareas
This should be fixed and can be reviewed together with #8297. It is more or less a duplicate and therefore I close it. Andreas Müller
06:14 PM bug #9476: SpecimenTypeDesignations for existing names in other nom acts can not be created
works as expected, ticket can be closed. Wolf-Henning Kusber
03:44 PM bug #9476 (Resolved): SpecimenTypeDesignations for existing names in other nom acts can not be cr...
Andreas Kohlbecker
03:43 PM bug #9476 (In Progress): SpecimenTypeDesignations for existing names in other nom acts can not be...
please review Andreas Kohlbecker
06:06 PM bug #9480: SpecimenTypeDesignationEditor: designationReference --> new should be limited to secti...
function as expected, ticket can be closed. Wolf-Henning Kusber
03:41 PM bug #9480: SpecimenTypeDesignationEditor: designationReference --> new should be limited to secti...
please review Andreas Kohlbecker
01:53 PM bug #9480 (Resolved): SpecimenTypeDesignationEditor: designationReference --> new should be limit...
Applied in changeset commit:cdm-vaadin|8195658eef52a7189fd6c622d34b020516db9ed5. Andreas Kohlbecker
05:57 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
Review: Internal error when selecting variety of form, instead of opening a third field for the last epithet. Wolf-Henning Kusber
03:40 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
please review Andreas Kohlbecker
02:38 PM bug #9483 (Resolved): LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting tr...
Applied in changeset commit:cdmlib|e20135dca8ba5443b97814e31ad18cdc93036865. Andreas Kohlbecker
02:27 PM bug #9483 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trin...
The LIE occurs in `public String rankSpecificNamePart()` at `rank.isHigher(Rank.GENUS())` which internally calls `Or... Andreas Kohlbecker
04:36 PM bug #9482 (Closed): NameTypeDesignationEditor: designationReference --> new causes LIE
Andreas Kohlbecker
04:00 PM bug #9482: NameTypeDesignationEditor: designationReference --> new causes LIE
limitation works already, only the LIE is a problem Andreas Kohlbecker
01:55 PM bug #9482: NameTypeDesignationEditor: designationReference --> new causes LIE
Currently creating new reference is blockes by a
~~~
org.hibernate.LazyInitializationException: could not initia...
Andreas Kohlbecker
01:53 PM bug #9482 (Closed): NameTypeDesignationEditor: designationReference --> new causes LIE
in some cases creating new reference is blocked by a
~~~
org.hibernate.LazyInitializationException: could not in...
Andreas Kohlbecker
04:36 PM Revision 53c22678 (cdm-vaadin): ref #9482 fixing init strategy for description source reference
Andreas Kohlbecker
03:38 PM Revision 5c297207 (cdmlib): ref #9482 fixing init strategy for description source reference
Andreas Kohlbecker
03:16 PM Revision 413be67f (cdm-vaadin): fixing compiler problem with generic type var
Andreas Kohlbecker
03:10 PM Revision 57902109 (cdm-vaadin): cleanup
Andreas Kohlbecker
03:04 PM Revision 891e4775 (cdm-vaadin): cleanup
Andreas Kohlbecker
02:37 PM Revision e20135dc (cdmlib): fix #9483 adapting bean initialization in .TaxonNameDaoHibernateImpl....
Andreas Kohlbecker
01:51 PM Revision 8195658e (cdm-vaadin): fix #9480 SpecimenTypeDesignationEditor: limiting designationRefe...
Andreas Kohlbecker
12:08 PM bug #8297: Fix condensed distribution string for E+M
ERS:
für native: reported in error gilt das gleiche wie für introduced: reported in error, ein Minus - vor dem Kür...
Andreas Müller
12:07 PM bug #9481 (Closed): ObjectDeletedException when swap syn and accepted with descriptions belonging...
While swapping synonym to taxon, the descriptions are cloned but cannot be deleted with the old accepted taxon becaus... Katja Luther
11:35 AM bug #5670 (Resolved): Refresh of Taxon Navigator
I put this to resolved so I have it on the review list.
Before closing the ticket we should create a new ticket for ...
Andreas Müller
10:28 AM bug #5670: Refresh of Taxon Navigator
in #note-7 the steps already solved are described, if there are other issues we should create a new ticket or keep th... Katja Luther
11:32 AM feature request #9340 (Resolved): Workflow support for secundum handling when making synonym a ne...
I put this ticket to resolved so I have it in the review list. Before closing the ticket we should move open issues t... Andreas Müller
11:31 AM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
Can you add a list to the description, which other operations are planned to have this workflow support? Andreas Müller
10:19 AM feature request #9340: Workflow support for secundum handling when making synonym a new accepted ...
please review the already implemented workflows Katja Luther
11:24 AM Revision 4770809e (taxeditor): ref 5670: refresh of parent node in navigator after swap accepted ...
Katja Luther
11:19 AM Revision ebe49c04 (taxeditor): adapt order in menu of name editor
Katja Luther
11:09 AM Revision 1a86c162 (taxeditor): ref 5670: refresh of navigator after swap accepted and synonym
Katja Luther
11:06 AM Revision 82d445b4 (cdmlib): cleanup and make NPE location clearer
Andreas Müller
10:26 AM bug #7521 (Resolved): refresh of taxonnavigator sometimes does not work for moving taxonnodes
this should also be fixed while working on #5670 Katja Luther
10:09 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
works now Andreas Müller
10:08 AM bug #8198 (Closed): Deleting an image gallery from image gallery view shows wrong configuration d...
Andreas Müller
08:05 AM bug #8767 (Resolved): Workflow support for publish flag
implemented the publish check also for accepted to syn. Katja Luther
07:55 AM bug #9467 (Closed): AssertionFailedException when opening DefaultFeatureTreePreference and prefer...
Andreas Müller wrote:
> Andreas Müller wrote:
> > Multi-select is still possible:
> > ![](picture658-1.png)
>
...
Katja Luther

02/25/2021

05:20 PM bug #9480 (Closed): SpecimenTypeDesignationEditor: designationReference --> new should be limited...
Andreas Kohlbecker
05:15 PM Revision 3776382f (cdm-vaadin): ref #9475 fixing NameTypeDesignations for existing names in other...
Andreas Kohlbecker
04:58 PM bug #9479 (Closed): ToOneRelatedEntityCombobox misses sending ValueChanged events to MBeanFieldGroup
Andreas Kohlbecker
03:05 PM bug #9479 (Resolved): ToOneRelatedEntityCombobox misses sending ValueChanged events to MBeanField...
Applied in changeset commit:cdm-vaadin|f2a3bcfd9db13c5182ad648cf848d50df85a78d1. Andreas Kohlbecker
03:03 PM bug #9479 (Closed): ToOneRelatedEntityCombobox misses sending ValueChanged events to MBeanFieldGroup
the SpecimenTypeDesignationDTORow contains the `ToOneRelatedEntityCombobox<Reference> designationReference`
The fie...
Andreas Kohlbecker
04:25 PM bug #8767: Workflow support for publish flag
Katja Luther wrote:
> Changing an unpublished accepted to a synonym of an published accepted taxon, how should we ha...
Andreas Müller
11:35 AM bug #8767: Workflow support for publish flag
Changing an unpublished accepted to a synonym of an published accepted taxon, how should we handle this? Keep the pub... Katja Luther
09:55 AM bug #8767: Workflow support for publish flag
By the way, currently this is handled as an info (i) but I think a warning would be better. Andreas Müller
09:54 AM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> Accordingly we should check ALL operations to handle the publish flag correctly.
E.g. als...
Andreas Müller
09:49 AM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> The message pops up 2x now
I can not reproduce this anymore.
Andreas Müller
09:45 AM bug #8767: Workflow support for publish flag
Andreas Müller wrote:
> The message pops up 2x now
With the actual nightly build I can not reproduce this.
Katja Luther
09:42 AM bug #8767: Workflow support for publish flag
Accordingly we should check ALL operations to handle the publish flag correctly. Andreas Müller
09:42 AM bug #8767: Workflow support for publish flag
Also swapping synonym with accepted has strange behavior: only the names swap but the publish flag stays. E.g. if old... Andreas Müller
09:26 AM bug #8767 (Feedback): Workflow support for publish flag
The message pops up 2x now Andreas Müller
04:23 PM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
Andreas Müller wrote:
> Multi-select is still possible:
> ![](picture658-1.png)
If this is fixed, yes.
Andreas Müller
11:30 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
so we can close this ticket? Katja Luther
10:01 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
Katja Luther wrote:
> Andreas Müller wrote:
> > Wir sollten auch das Label noch anpassen für beide Fenster.
> >
...
Andreas Müller
10:00 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Im Deutschen: Default Merkmalsbaum => ...
Katja Luther
09:59 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
Katja Luther wrote:
> Andreas Müller wrote:
> > Im Deutschen: Default Merkmalsbaum => Standard Merkmalsbaum
Is t...
Andreas Müller
09:24 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
Andreas Müller wrote:
> Wir sollten auch das Label noch anpassen für beide Fenster.
>
> Im Deutschen: Default Mer...
Katja Luther
09:11 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
Außerdem sollten wir die Reihenfolge ändern, die nat. lang. descriptions sind unwichtig, und sollten daher nach unten Andreas Müller
09:10 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference shou...
Wir sollten auch das Label noch anpassen für beide Fenster.
Im Deutschen: Default Merkmalsbaum => Standard Merkmal...
Andreas Müller
08:56 AM bug #9467 (Feedback): AssertionFailedException when opening DefaultFeatureTreePreference and pref...
Multi-select is still possible:
![](picture658-1.png)
Andreas Müller
03:21 PM Revision cc55de8f (cdmlib): cleanup
Andreas Müller
03:21 PM Revision dd4317ec (cdmlib): ref #8297 use CondensedDistributionConfiguration instead -Recipe wher...
Andreas Müller
03:05 PM Revision f2a3bcfd (cdm-vaadin): fix #9479 passing ValueChangedListener add remove to inner lazySe...
Andreas Kohlbecker
02:54 PM Revision e67bdcf7 (cdm-vaadin): cleanup
Andreas Kohlbecker
02:48 PM bug #9478 (Resolved): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow ...
Applied in changeset commit:cdm-vaadin|36c60299426da3a4ae7f9c90ba0568d8e9e64402. Andreas Kohlbecker
02:41 PM bug #9478 (In Progress): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTOR...
Andreas Kohlbecker
02:38 PM bug #9478 (Closed): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow fa...
the SpecimenTypeDesignationDTORow contains the `ToOneRelatedEntityCombobox<Reference> designationReference`
When se...
Andreas Kohlbecker
02:48 PM Revision 36c60299 (cdm-vaadin): fix #9478 fixing validation problem in ToOneRelatedEntityCombobox
Andreas Kohlbecker
01:55 PM Revision 7eaf3bb5 (taxeditor): ref #8767: add warning dialog for change acc to syn for different ...
Katja Luther
12:56 PM Revision 7c96f526 (taxeditor): ref #8767: add warning dialog for change acc to syn for different ...
Katja Luther
12:55 PM Revision 8bc0e09e (cdmlib): ref #8767: fix publish flag when change accepted to syn
Katja Luther
12:52 PM Revision 84d9b190 (cdmlib): ref #8767: fix publish flag when swap syn and accepted
Katja Luther
11:35 AM Revision 39f4b8b1 (cdm-vaadin): cleanup
Andreas Kohlbecker
11:28 AM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration...
Katja Luther
10:24 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
Andreas Müller wrote:
> Katja Luther wrote:
> > The configuration wizard is only shown for persisted media now and ...
Katja Luther
10:12 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
Katja Luther wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > The exception is fixed now. However, t...
Andreas Müller
10:08 AM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration...
Andreas Müller
10:06 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
Katja Luther wrote:
> The configuration wizard is only shown for persisted media now and only if media exist.
it ...
Andreas Müller
11:23 AM Revision 8f180179 (taxeditor): ref #8767: add warning dialog instead of info dialog
Katja Luther
11:21 AM Revision fef9b989 (taxeditor): ref #8767: add warning dialog instead of info dialog
Katja Luther
11:17 AM Revision c0c89a30 (cdm-vaadin): ref #9476 passing citationUuid with SpecimenTypeDesignationWorkin...
Andreas Kohlbecker
11:14 AM Revision 7dc4a834 (cdm-vaadin): ref ##9476 passing citationUuid with SpecimenTypeDesignationWorki...
Andreas Kohlbecker
10:36 AM Revision 245b2535 (cdmlib): ref #9475 fixing problems caused by implementation for #9324 - changi...
Andreas Kohlbecker
10:35 AM Revision d47bbcb9 (cdm-vaadin): cleanup
Andreas Kohlbecker
10:32 AM Revision 73c98fbf (taxeditor): ref #8767: add warning also for move syn and swap syn and accepted
Katja Luther
10:27 AM bug #9477 (New): New ordered terms do not have correct order index
If a new term is added to a new ordered term vocabulary the terms is not put to the correct position. Instead it is m... Andreas Müller
10:23 AM Revision e086828e (taxeditor): ref #8198: correct handling of empty gallery
Katja Luther
09:56 AM Revision 4a39cb5e (taxeditor): ref #9467: do not allow multiselect and order of elements
Katja Luther

02/24/2021

11:15 PM bug #8297: Fix condensed distribution string for E+M
AM:
für folgende Status bräuchte ich noch die korrekten Symbole:
• native: reported in error => „-“ ? Genaus...
Andreas Müller
04:07 PM bug #8297: Fix condensed distribution string for E+M
ERS (2020-06-23):
Unterareale sollten ja eigentlich in Klammern nach dem Hauptareal zusammengefasst werden, also d...
Andreas Müller
03:27 PM bug #8297: Fix condensed distribution string for E+M
Bellis perennis on test: http://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/taxon/0eb6ca37-3365-4af5... Andreas Müller
10:03 PM feature request #3816 (Resolved): Create "Undefined" status and choose it for NULL status
I added the term. We should split the update script to another ticket. Andreas Müller
05:39 PM feature request #3816: Create "Undefined" status and choose it for NULL status
The new status should be last in vocabulary as discussed for ordering in E+M Andreas Müller
05:37 PM feature request #3816: Create "Undefined" status and choose it for NULL status
use uuid from E+M undefined status and move E+M term to existing vocabulary Andreas Müller
10:00 PM Revision 8b7c16f0 (cdmlib): ref #3816, ref #8858 add "undefined" to PAT vocabulary
Andreas Müller
06:08 PM bug #9476 (Closed): SpecimenTypeDesignations for existing names in other nom acts can not be created
this is a regression caused by the changes made for #9324
To reproduce
* in registration workingset editor: ...
Andreas Kohlbecker
06:07 PM bug #9475 (Resolved): NameTypeDesignations for existing names in other nom acts can not be created
Andreas Kohlbecker
05:51 PM bug #9475 (Closed): NameTypeDesignations for existing names in other nom acts can not be created
this is a regression caused by the changes made for #9324
To reproduce
* in registration workingset editor: ...
Andreas Kohlbecker
05:53 PM Revision bd6037c5 (cdm-vaadin): ref #9475 fixing problems caused by implementation for #9324 - ch...
Andreas Kohlbecker
05:38 PM bug #8858: Ordering of distribution status 'undefined' is not correct in E+M
Another solution is implementing #3816 Andreas Müller
05:20 PM bug #8858 (Resolved): Ordering of distribution status 'undefined' is not correct in E+M
Fixed by adding ordering by vocabulary uuid to term ordering. This is a preliminary solution until ordering via order... Andreas Müller
05:16 PM Revision b553ef04 (cdmlib): ref #8858 ordering of terms from different vocabularies use voc.uuid ...
Andreas Müller
04:57 PM feature request #5779 (Closed): Update EuroPlusMedCondensedDistributionComposer to use new symbol...
This should be fixed by fixing #8297 . E+M condensed distribution uses symbol2 now by default. Andreas Müller
04:51 PM Revision aeadc9cf (cdmlib): cleanup
Andreas Müller
04:01 PM feature request #3907 (Closed): EuroMed: implement condensed "status" string of distribution info...
This is generally implemented. Open issues (and full refactoring) will be done in #8297 Andreas Müller
03:47 PM Revision a9656555 (cdmlib-apps): fix compile error
Andreas Müller
03:47 PM Revision f87413f4 (taxeditor): cleanup
Andreas Müller
03:35 PM feature request #9474 (New): Creating a new Specimen/FieldUnit in Specimen Tree Editor with taxon...
When a taxon is selected in specimen tree editor and a new fieldunit/specimen is created, the specimen should have an... Katja Luther
03:26 PM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration...
Andreas Müller wrote:
> Andreas Müller wrote:
> > The exception is fixed now. However, the "delete the media data c...
Katja Luther
03:24 PM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration...
Andreas Müller
03:23 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
Andreas Müller wrote:
> The exception is fixed now. However, the "delete the media data completely, even if ..." doe...
Andreas Müller
03:14 PM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration...
The configuration wizard is only shown for persisted media now and only if media exist.
The exception should not c...
Katja Luther
12:41 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
Also the configuration sould only show up if the image gallery is not empty. This is currently not the case.
And f...
Andreas Müller
12:38 PM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration...
The exception is fixed now. However, the "delete the media data completely, even if ..." does not work. The media is ... Andreas Müller
11:49 AM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration...
this should be fixed. Katja Luther
03:15 PM Revision c3e57b69 (taxeditor): avoid NPE
Katja Luther
03:14 PM Revision e4ddb405 (taxeditor): ref #8198: show config dialog only for persisted media and fix del...
Katja Luther
03:07 PM Revision db83cf0b (taxeditor): ref #8198: show config dialog only for persisted media and fix del...
Katja Luther
01:22 PM Revision 0afdad42 (taxeditor): ref #8767: add information when publish flag of the new taxon diff...
Katja Luther
12:57 PM bug #9467 (Resolved): AssertionFailedException when opening DefaultFeatureTreePreference and pref...
Andreas Müller wrote:
> This is fixed and can be closed.
>
> By the way the default feature tree preference page ...
Katja Luther
12:56 PM Revision db56c41b (taxeditor): ref #9467: do not allow multi select
Katja Luther
12:33 PM bug #8767 (Resolved): Workflow support for publish flag
Andreas Müller wrote:
> Katja Luther wrote:
> > I also adapted the changeSynonymToAcceptedTaxon, the newly created ...
Katja Luther
12:32 PM Revision 373576f7 (taxeditor): ref #8767: add information when publish flag of the new taxon diff...
Katja Luther
12:27 PM bug #9465 (Closed): Open in ... NameEditor for orphan taxa results in CCE
Looks ok now Andreas Müller
11:43 AM bug #9465 (Resolved): Open in ... NameEditor for orphan taxa results in CCE
Andreas Müller wrote:
> I can't see that any exception is thrown now ...
missed to commit DefaultOpenTaxonEditorF...
Katja Luther
10:51 AM bug #9465 (Feedback): Open in ... NameEditor for orphan taxa results in CCE
I can't see that any exception is thrown now ... Andreas Müller
10:14 AM bug #9465 (Resolved): Open in ... NameEditor for orphan taxa results in CCE
Andreas Müller wrote:
> Is fixed.
> Maybe we should think about an interface IHasUuid to avoid having generics like...
Katja Luther
12:14 PM Revision 7f7649e0 (cdm-dataportal): ref #8297 adapt dataportal code to new condensed distribution...
Andreas Müller
11:47 AM bug #9472 (Closed): Encoding problem with ProxyUtils.CollectionType leading to failing lazy colle...
looks fine and works as expected (tested on turkish os) Katja Luther
11:46 AM Revision 849b38e8 (taxeditor): ref #5670: refresh of navigator for updated node
Katja Luther
11:23 AM Revision c9ad48b6 (taxeditor): code cleaning
Katja Luther
10:53 AM Revision ee472ec0 (taxeditor): ref #9465: throw exception if object is not taxon or UuidAndTitleC...
Katja Luther
10:32 AM bug #5670: Refresh of Taxon Navigator
is this fixed/for review? If not can you leave a note on open issues? Andreas Müller
10:16 AM feature request #9427 (Closed): Code cleaning in CdmPreferenceCache
looks fine Katja Luther
10:13 AM Revision 8d45fe05 (taxeditor): ref #9465: throw exception if object is not taxon or UuidAndTitleC...
Katja Luther
08:56 AM Revision 4224661e (cdmlib): ref #9340: fix NPE
Katja Luther
08:24 AM Revision ae13fa54 (cdmlib): ref #9340: adapt service methods to secundum workflow - adapt tests
Katja Luther

02/23/2021

11:16 PM Revision a6527252 (cdmlib): ref #8297 some minor adaptations and adding taggedText to CondensedDi...
Andreas Müller
11:15 PM Revision 92699374 (cdmlib): cleanup
Andreas Müller
10:14 PM Revision ac1f39b4 (cdmlib): ref #8297 make isAnyIntroduced transient
Andreas Müller
06:20 PM Revision ec7eaac5 (cdmlib): ref #8297 refactor condensed distribution string handling
Andreas Müller
06:20 PM Revision 00103853 (cdmlib): cleanup
Andreas Müller
06:15 PM Revision b02474e5 (cdmlib): ref #9340: adapt service methods to secundum workflow - adapt tests
Katja Luther
06:11 PM Revision d75abe5d (cdmlib): ref #9340: adapt service methods to secundum workflow
Katja Luther
03:57 PM feature request #9340 (In Progress): Workflow support for secundum handling when making synonym a...
the workflow for change synonym to accepted and accepted to synonym is adapted. Katja Luther
03:54 PM Revision 44000ac1 (taxeditor): ref #9340: workflow for changing synonym to acc and acc to synonym
Katja Luther
01:50 PM EDIT Platform Etablierung report #9378 (Closed): Meeting EDIT Platform documentation 2021-02-22
**Ergebnisprotokoll** des Meetings: https://wiki.bgbm.org/bdinotes/index.php/BDI_299 Andreas Kohlbecker
11:27 AM Revision 9c170b09 (cdmlib): use full semantic for PresenceAbsenceTerm uuids
Andreas Müller

02/22/2021

08:02 PM Revision 58358572 (taxeditor): ref #8198: fix ConcurrentModificationException - continue
Katja Luther
07:51 PM Revision 5e3747b3 (taxeditor): ref #8198: fix ConcurrentModificationException
Katja Luther
07:48 PM Revision 299adb56 (taxeditor): ref #9340: secundum ref workflow for synonym to taxon
Katja Luther
05:33 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
please call pull before fixing as I did code cleaning Andreas Müller
05:32 PM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration...
If deleting even if media is linked a concurrent modification is thrown due to this code:
~~~
...
Andreas Müller
05:30 PM Revision 0c9893d5 (taxeditor): ref #8198 adapt message for deleting image
Andreas Müller
05:29 PM Revision d847c874 (taxeditor): cleanup
Andreas Müller
04:55 PM Revision 6bbbc666 (taxeditor): cleanup
Andreas Müller
04:47 PM bug #9467 (Feedback): AssertionFailedException when opening DefaultFeatureTreePreference and pref...
This is fixed and can be closed.
By the way the default feature tree preference page allows multi-select (but stor...
Andreas Müller
04:29 PM bug #9465 (Feedback): Open in ... NameEditor for orphan taxa results in CCE
Is fixed.
Maybe we should think about an interface IHasUuid to avoid having generics like "extends DefaultOpenHandle...
Andreas Müller
04:22 PM bug #9374 (Closed): ClassCastException when switching between media
Difficult to test as it appears from time to time. So I think we can close this and reopen if it appears again. Andreas Müller
04:21 PM bug #9471 (Closed): Widget is disposed exception when switching away from media before details vi...
I couldn't reproduce it anymore by testing a few images I guess it is fixed. Reopen if it appears again. Andreas Müller
04:17 PM bug #9466 (Closed): Termselection preference pages do not check the elements
Seems to work. Andreas Müller
10:38 AM feature request #9473 (New): Support moving images to new taxa similar to facts
For a long time it is possible to move single facts or full description from one taxon to another taxon. This is curr... Andreas Müller

02/19/2021

05:21 PM Revision 44c1cf4c (cdmlib): cleanup TermNodeDto
Andreas Müller
05:09 PM Revision 15054273 (taxeditor): fix potential NPEs
Andreas Müller
05:06 PM Revision 067af2dc (taxeditor): cleanup
Andreas Müller
11:41 AM bug #7107: "Omit level" (TDWG Level2) in distribution hierarchy should not supress distributions ...
Andreas Kohlbecker wrote:
> Hallo Andreas, ich denke das ist auch für Euro+Med releveant, oder?
>
> Wenn ja, soll...
Andreas Müller
11:11 AM bug #9472: Encoding problem with ProxyUtils.CollectionType leading to failing lazy collection loa...
Please review. Andreas Müller
11:08 AM bug #9472 (Resolved): Encoding problem with ProxyUtils.CollectionType leading to failing lazy col...
Applied in changeset commit:cdmlib|707e14fada836b1ff3fe6e83d0de6508baeb2bc6. Andreas Müller
11:07 AM bug #9472 (Closed): Encoding problem with ProxyUtils.CollectionType leading to failing lazy colle...
The method
~~~
return this.name().toLowerCase();
~~~
seems to be encoding dependend, leading e.g. in Turkisc...
Andreas Müller
11:08 AM Revision 707e14fa (cdmlib): fix #9472 fix encoding issue in ProxyUtils.CollectionType.toString()
Andreas Müller
11:08 AM Revision f7f95e38 (cdmlib): cleanup
Andreas Müller

02/18/2021

03:06 PM Revision 7c11179c (taxeditor): add class information to exception -fix compilation error
Katja Luther
03:03 PM Revision e6989719 (taxeditor): add class information to exception
Katja Luther
12:52 PM bug #9466 (Resolved): Termselection preference pages do not check the elements
This should be fixed, please review. Katja Luther
10:58 AM Revision 69d28708 (cdmlib): ref #8198: add possibility to delete a list of media
Katja Luther
10:45 AM Revision ab7d0888 (taxeditor): ref #8198: l10n file adaptions
Katja Luther
10:31 AM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration...
For the gallery the dialog explicitly say that the gallery still contains media data and ask how to handle them. Plea... Katja Luther
10:29 AM Revision 4da7c81b (taxeditor): ref #8198: show media delete config wizard only for galleries wit...
Katja Luther

02/17/2021

02:08 PM Revision 0c247ba9 (taxeditor): add additional debugging in AbstractPersistentCollection
Katja Luther
12:42 PM Revision 628f1778 (taxeditor): cleanup
Andreas Müller
12:40 PM Revision 96576957 (taxeditor): remove svnignore from etc/jetty
Andreas Müller
12:36 PM Revision c2e26de3 (taxeditor): ref #9359 update spring version in remotingApplicationContext and ...
Andreas Müller
12:31 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
If this is in progress should we move it to current milestone? Andreas Müller
12:31 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
For existing images we need the delete dialog that is true. I have not checked how the current dialog looks like but ... Andreas Müller
12:25 PM bug #8198 (In Progress): Deleting an image gallery from image gallery view shows wrong configurat...
Katja Luther
10:03 AM bug #8297: Fix condensed distribution string for E+M
Diskussion mit AK über handling des CondensedDistributionString im Portal:
Derzeit werden Teile des Strings hardco...
Andreas Müller
09:09 AM bug #8297 (In Progress): Fix condensed distribution string for E+M
AM:
Wenn die Subareale beide z.B. indigenous sind, aber unterschiedliche Status haben, sollen die Hauptareale dann...
Andreas Müller
09:08 AM bug #8297: Fix condensed distribution string for E+M
AM:
Wenn es für ein Areal Unterareale gibt und diese haben einmal einen indigenous und einmal einen „foreign“ Sta...
Andreas Müller

02/16/2021

05:04 PM bug #9471 (Resolved): Widget is disposed exception when switching away from media before details ...
yes, this should be resolved. Please review. Katja Luther
04:48 PM bug #9471: Widget is disposed exception when switching away from media before details view is com...
is this resolved? (you mention it in #9374) Andreas Müller
01:57 PM bug #9471 (Closed): Widget is disposed exception when switching away from media before details vi...
When the media details view is not completely loaded and clicking on another element a "widget is disposed exception"... Katja Luther
04:49 PM Revision 32ca3eb7 (taxeditor): ref #9466: avoid NPE
Katja Luther
02:28 PM bug #9374: ClassCastException when switching between media
After fixing #9471 the problem seems to be fixed. Please have a look whether you still can reproduce the exception. Katja Luther
02:24 PM Revision 4e80230e (taxeditor): ref #6229: multilanguage support for media details view
Katja Luther
02:02 PM Revision 2ab78f11 (taxeditor): ref #9471: avoid widget is disposed for media details view
Katja Luther
10:17 AM task #9359 (In Progress): Update cdmlib and taxeditor dependencies
Andreas Müller
08:02 AM bug #9468: specimen type of existing name cannot be saved
this seems to be a problem which stems from incomplete solution of #9290 Andreas Kohlbecker
08:01 AM bug #9468 (In Progress): specimen type of existing name cannot be saved
This sees to happen with newly created registrations only.
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07:50:46.162 [phycobank] [qtp599984672-30] ERROR ...
Andreas Kohlbecker
07:38 AM bug #9470 (Resolved): CollectionDTO constructor prevent from circles
Applied in changeset commit:cdmlib|85d748e1311f1b1045ea33d07ebf5f0beb55e359. Andreas Kohlbecker
07:30 AM bug #9470 (Closed): CollectionDTO constructor prevent from circles
The constructor of CollectionDTO is being called recursively, to initialize also super collections.
Prevent from end...
Andreas Kohlbecker
07:38 AM Revision 85d748e1 (cdmlib): fix #9470 preventing circular calls of CollectionDTO constructor
Andreas Kohlbecker
 

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