Activity
From 02/01/2021 to 03/02/2021
03/02/2021
- 11:10 PM bug #9506: Rights can not be selected for reuse
- The problem is probably that for copyrights usually only an agent and the rights type is given, but no text.
So the ... - 10:35 PM bug #9506 (Closed): Rights can not be selected for reuse
- The selection dialog for rights does not show any existing data even if "*" is entered.
This happened in the cypru... - 10:09 PM bug #9488 (Feedback): Show details of description in character matrix
- Adding a source was possible but I could not persist the change. After reopening the changes were missing.
This is... - 09:40 PM feature request #3816 (Closed): Create "Undefined" status and choose it for NULL status
- Fixed. The update script is handled in separat ticket #9505.
- 09:39 PM feature request #9505 (New): Set missing distribution status to "undefined"
- copied from #3816
Before, check which data are affected and think about if it is really necessary.
- 09:33 PM bug #9491 (Feedback): Order of terms in not order relevant trees
- There was still an NPE when editing the title of a tree. I fixed this with a501f1e0 .
It generally works. Only I d... - 09:21 PM bug #9504 (Closed): Changing term tree title is not persisted
- If I create a new term tree and change the title before saving the title is reset to the default title after saving
- 09:15 PM feature request #9499 (Closed): Make isAbsent editable in DetailsView
- This is fixed though "should be disabled for mangaged terms" is not yet implemented. But it seems that this is not ye...
- 03:18 PM feature request #9499 (Resolved): Make isAbsent editable in DetailsView
- Applied in changeset commit:taxeditor|a524e7d8a97c00b9274b767e73f75d0a47627da0.
- 02:11 PM feature request #9499 (Closed): Make isAbsent editable in DetailsView
- For PresenceAbsenceTerm the isAbsent attribute is not yet editable and visible.
As idInVoc (and others) editing sh... - 08:57 PM Revision a501f1e0 (taxeditor): ref #9491 fix NPE in comparator
- 08:57 PM Revision f0f4b490 (taxeditor): cleanup
- 08:38 PM bug #7107: "Omit level" (TDWG Level2) in distribution hierarchy should not supress distributions source reference
- AM:
ich sehe gerade auf http://www.europlusmed.org/cdm_dataportal/taxon/6a8e85bd-5e52-4ae2-9444-99128c87a672, dass... - 08:19 PM feature request #9502: Implement subarea preference rule and fallback areas for areas with complex hierarchy
- AM:
Problematisch sind derzeit ja noch die Fallback-Areale, die viele Hierarchiestufen haben oder überlappen. Also... - 07:31 PM feature request #9502 (Resolved): Implement subarea preference rule and fallback areas for areas with complex hierarchy
- #5050 defines the subarea preference rule and also describes implements it for areas Ju, Cz, IJ and LS which are rela...
- 08:17 PM feature request #9500: Allow removing certain distribution status from distribution publication
- AM:
Und noch etwas bezüglich undefined:
Im alten Portal werden diese Status ja auch grundsätzlich nicht mitbrüc... - 08:15 PM feature request #9500: Allow removing certain distribution status from distribution publication
- AM:
In einigen Fällen, und insbesondere in den Fällen, bei denen die Unterareale nur eine undefined Verbreitung ha... - 03:40 PM feature request #9500 (In Progress): Allow removing certain distribution status from distribution publication
- from #8858#note-14
An even better solution might be to use a term tree for filtering and ordering the distribution... - 08:14 PM bug #8297: Fix condensed distribution string for E+M
- An open issue:
... sollen im CondensedDistributionString für die Überareale jeweils nur die Unterarealstatus ausge... - 08:12 PM task #9501: Find inconsistent higher area distribution status data in E+M
- AM:
Ein ähnlicher Fall, der mir nicht ganz klar ist, ist der, wenn es für das Überareal einen Status mit höherer P... - 07:03 PM task #9501: Find inconsistent higher area distribution status data in E+M
- The results of the query were sent to ERS today.
- 07:03 PM task #9501 (New): Find inconsistent higher area distribution status data in E+M
- The distribution status of a higher area (area with subareas) should usually not have a higher status then the highes...
- 07:59 PM feature request #9484 (Rejected): Distinguish default hidden/fallback area handling from empty list of hidden/fallback area markers
- In #9502 it was decided that hidden and fallback areas should better be handled by term trees so the current ticket i...
- 07:58 PM feature request #9503 (Closed): Handle term tree of areas and distribution status for distributionInfo in dataportal
- This is blocked by #9500 and/or #9502.
See the description there for further information. - 07:51 PM bug #9486 (Duplicate): Fallback areas not handled in area hierarchy are not showing up correctly if subarea data exists
- This is more or less a duplicate for #9502.
- 07:45 PM feature request #3904 (Closed): EuroMed: Implement filtering rules for distributions
- All subtasks and related are closed. Open issues are handled in follow up tickets #9500 (for status) and #9502 (for a...
- 07:42 PM feature request #5050 (Closed): revise the subAreaPreference rule for filtering Distributions
- Generally this is fixed. The subarea preference is implemented for map creation. Some open issues with fallback areas...
- 07:33 PM task #8671 (Rejected): Distribution in E+M (BM) on different levels
- As the rule is clear that supra-area information should not be shown on maps as long as subarea information is avail...
- 07:10 PM bug #8670 (Closed): Unwanted distribution aggregation/display on 2 levels
- As there were no complaints about this issue anymore since the ticket was resolved I close it. Open new ticket for an...
- 03:41 PM bug #8858 (Closed): Ordering of distribution status 'undefined' is not correct in E+M
- The new implementation works as expected. The result is for Talinum paniculatum on test is "-● -Md(??M) [aAu(A) pAz(a...
- 01:36 PM bug #8858: Ordering of distribution status 'undefined' is not correct in E+M
- Applied in changeset commit:cdmlib|4dccf2d61ae938ff7638aa262de483068859fd3b.
- 01:34 PM bug #8858 (Resolved): Ordering of distribution status 'undefined' is not correct in E+M
- The reason why the first fix didn't work is that PresenceAbsenceTerm had it's own compareTo method, including an isPr...
- 03:18 PM Revision a524e7d8 (taxeditor): fix #9499: add isAbsent checkBox to details view
- 02:15 PM bug #9475 (Closed): NameTypeDesignations for existing names in other nom acts can not be created
- 01:36 PM Revision 4dccf2d6 (cdmlib): fix #8858 Improve presence/absence handling for PresenceAbsenceTerm.compareTo
- 01:36 PM Revision 372d9011 (cdmlib): cleanup
- 12:15 PM feature request #9494 (Closed): Improve UI: Selection of ranks in Name Editor
- closing as duplicate
- 09:43 AM Revision d170d72d (cdmlib): ref #8767: fix publish flag when change man to syn
- 09:36 AM bug #9483 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- 09:36 AM feature request #8981 (Closed): Improve NameStatus in UI
- 09:34 AM Revision 24398f04 (cdmlib): minor
- 09:33 AM feature request #9498 (Closed): Password Recovery, Registration and Login Dialog Tab fully functional
- this is needed for the cdm-vaadin login dialog tab "Password Recovery "
- 09:32 AM feature request #9497 (Closed): User self registration service
- this is needed for the cdm-vaadin login dialog tab "Register"
- 09:03 AM Revision 5e7f74f5 (taxeditor): smaller label issues
03/01/2021
- 11:36 PM Revision 56fcd434 (cdmlib): cleanup
- 10:10 PM feature request #9496 (New): Handling fossil taxa
- unsure how to do this.
PhycoBank need a "fossil" flag.
Where to place this?
In databases, a name is flaged as f... - 10:06 PM feature request #9495 (New): Add eISSN and eISBN fields if a publication is hard copy and electronic
- ISSN should be supplemented by a eISSN field
ISBN should be supplemented by a eISBN field
Field name to be discus... - 10:01 PM feature request #9494 (Closed): Improve UI: Selection of ranks in Name Editor
- The normal usecase is that 95% of name registrations are using just 5 ranks.
Some ranks in the selection are irrelev... - 09:46 PM bug #9493 (New): Duplicate of species epithet when an existing species name is used for typification
- After selection of an existing species name for typification, the selection of species epithets in the Name editor sh...
- 07:50 PM feature request #9492: Improve NameStatus in UI - new
- "Icn Shenzhen 2017" is not needed for PhycoBank
ICN is not the title
the year of publication is 2018
This is a... - 07:19 PM feature request #9492 (New): Improve NameStatus in UI - new
- Follow up zu #8981
Currently the fields are shown:
Status type // Reference // Reference detail // Rule considere... - 07:21 PM feature request #8981: Improve NameStatus in UI
- This ticket can be closed.
new ticket: #9492 - 06:40 PM bug #9491 (Resolved): Order of terms in not order relevant trees
- Changed to client side ordering because the server does not know about the preference "Show Id in Vocabulary" for the...
- 05:01 PM bug #9491 (Closed): Order of terms in not order relevant trees
- The order of not order relevant trees in term tree editors should be alphabetic.
- 06:40 PM Revision 1a4389ec (taxeditor): ref #9491: do the ordering on editor side - code cleaning
- 06:31 PM Revision 0073b027 (cdmlib): ref #9491: revert changes in cdmlib
- 06:26 PM Revision 85f422a4 (taxeditor): ref #9491: do the ordering on editor side
- 06:20 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
- The name type section works for new genera names as well as for expisting names as expected.
The recorded error was ... - 04:06 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
- I cant see any problem.
Here you can see me choosing the section (non sense data) of the typifying authors:
![]... - 05:58 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- Trinominals can be created and stored. If this is due to #9483 this ticket can be closed.
- 04:50 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- new ticket for possibly better solution #9490
- 03:11 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- Hi Henning, this issue can be reviewed again.
- 03:08 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- Usually we are passing initStrategies to the service methods in order to initialize associated entities. In this case...
- 05:50 PM bug #9485 (Closed): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
- 05:43 PM bug #9485: TaxonNamePopupEditor: StackOverflow on selecting ICN reference
- works as expected, ticket can be closed.
- 10:38 AM bug #9485 (Resolved): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
- Applied in changeset commit:cdm-vaadin|3035e8761cb98d17cd8c2874305069953d656310.
- 08:23 AM bug #9485 (Closed): TaxonNamePopupEditor: StackOverflow on selecting ICN reference
- Selection of a ICN reference causes an error
Name editor, new name goto nom.inval., select nom.inval.
Sele... - 05:35 PM Revision 520afc6d (cdmlib): fix #9483 better solution by using rankClass only - restoring chanches after merge with previous cleanup
- 05:23 PM Revision 6d804466 (cdmlib): fix #9483 better solution by using rankClass only
- 05:04 PM bug #9488 (Resolved): Show details of description in character matrix
- this should be fixed, please review
- 04:09 PM bug #9488 (Closed): Show details of description in character matrix
- mail NK:
wenn ich in der Matrix mit dem Kontext-Menu zu einem Taxon "Create literature description" hinzufüge, bek... - 04:51 PM bug #8312 (Closed): Test, fix, improve and run Transmission engine for E+M
- This should be fixed with the implementation of transmission engine and following unified description aggregation as ...
- 04:50 PM task #9490 (Closed): avoid rank entity in TaxonNameParts
- ... vielleicht kann man den auch loswerden .... rankSpecificNamePart
kann man auch sofort bei der Bildung des DTO a... - 04:43 PM feature request #2625 (Closed): [E+M Overview] Data aggregation functionalities for E+M (TransmissionEngine)
- This should be fixed with the transmission engine implementations (see subtasks) and with the implementation of descr...
- 04:19 PM Revision 48671d79 (cdmlib): add _ to label to add the new term at the beginning of the terms list
- 04:13 PM Revision 97eff560 (cdmlib): cleanup
- 04:12 PM bug #9489 (New): Fix header of character matrix for hierarchical characters
- mail NK:
Matrix header: für den Matrix header in der obersten Hierarchie-Ebene, also 1. Spaltenüberschiriftenzeile... - 04:10 PM Revision 7e689eb5 (taxeditor): ref #9488: fix details view for descriptions in character matrix
- 04:09 PM bug #9470 (Closed): CollectionDTO constructor prevent from circles
- 04:07 PM Revision 683c7385 (cdm-vaadin): fixing bug in NameTypeDesignationPresenter
- 03:24 PM feature request #9487 (New): Split state (and/or other big) vocabularies
- mail NK:
Das Handling großer Vokabulare (States!) ist immer noch recht mühselig, wegen langer Lade- und Speicherzeit... - 03:21 PM Revision cb271641 (cdmlib): cleanup
- 03:21 PM Revision a05e4acf (cdmlib): fix #9483 initializing rank.vocabulary in the TaxonNameParts constructor - comment
- 03:20 PM Revision e9f80908 (cdmlib): children of termnodedto should be ordered alphabetically when not order relevant - continue
- 03:20 PM Revision b858a126 (cdmlib): children of termnodedto should be ordered alphabetically when not order relevant - continue
- 03:18 PM bug #9476 (Closed): SpecimenTypeDesignations for existing names in other nom acts can not be created
- 03:10 PM Revision d10e9a39 (cdmlib): fix #9483 initializing rank.vocabulary in the TaxonNameParts constructor
- 02:19 PM bug #8310 (Closed): Issues to solve in E+M shapefile
- I think generally we can close this ticket. Open and new issues can be handled in separate tickets like #9367. Open i...
- 12:51 PM bug #8310: Issues to solve in E+M shapefile
- There is another open issue reported in #9367
- 02:08 PM bug #4409: fallback areas are not adressable in the shape file
- Andreas Müller wrote:
> This seems to be fully fixed except for the Baltic states issue handled in #9367. TCS is now... - 01:25 PM bug #4409 (Closed): fallback areas are not adressable in the shape file
- This seems to be fully fixed except for the Baltic states issue handled in #9367. TCS is now shown as 1 area if no su...
- 11:05 AM bug #4409 (Resolved): fallback areas are not adressable in the shape file
- Andreas Müller wrote:
> This should be fixed now. Either with #8858 or already before. Open issues are otherwise han... - 10:59 AM bug #4409 (Closed): fallback areas are not adressable in the shape file
- This should be fixed now. Either with #8858 or already before. Open issues are otherwise handled in #8297 and related...
- 02:05 PM bug #9486 (Duplicate): Fallback areas not handled in area hierarchy are not showing up correctly if subarea data exists
- followup from #4409
In #4409 correct handling of fallback areas like Ju, Cz, IJ and LS in maps have been fixed. Un... - 01:53 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
- log from a hangup:
~~~
Mar 01 13:40:35 edit-community systemd[1]: Starting user-0.slice.
Mar 01 13:40:35 edit-co... - 01:49 PM bug #6383: fatal error on git push: The remote end hung up unexpectedly
- hung up still happen
attempt to find the cause by more loggin by logging the post-receive script execution with sy... - 01:40 PM Revision a5cc95ce (cdmlib): children of termnodedto should be ordered alphabetically when not order relevant
- 01:13 PM bug #9478 (Closed): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow fails validation
- no regression occurs in the case described in #7245
no duplicate of #8249
and fully solved - 12:34 PM Revision b0f33c74 (cdmlib): ref #9481: move the descriptions to the new taxon to avoid DDS when deleting the old taxon
- 11:33 AM bug #9480 (Closed): SpecimenTypeDesignationEditor: designationReference --> new should be limited to sections of the publishedUnit
- 10:38 AM Revision 3035e876 (cdm-vaadin): fix #9485 fixing stack overflow on setting component error
- 09:50 AM bug #8297: Fix condensed distribution string for E+M
- AM:
auf introduced: doubtfully introduced (perhaps cultivated only) bist du noch nicht explizit eingegangen in de...
02/27/2021
- 08:27 AM bug #8297 (Resolved): Fix condensed distribution string for E+M
- This should be fixed now and can be reviewed on test or on production after the next release
- 08:25 AM bug #8858 (Closed): Ordering of distribution status 'undefined' is not correct in E+M
- Andreas Müller wrote:
> Another solution is implementing #3816
This solution finally has been implemented. The st...
02/26/2021
- 11:44 PM Revision 455700e0 (cdmlib): ref #8297 handle fallback areas correctly in CondensedDistributionComposer
- 07:06 PM Revision 58c7c564 (taxeditor): enable service time logging
- 07:05 PM Revision 2b5b8997 (cdmlib): ref #8297, ref #9484 temporarily handle isEmpty similar to use default until #9484 is fixed
- 07:03 PM feature request #9484 (Rejected): Distinguish default hidden/fallback area handling from empty list of hidden/fallback area markers
- The current default CondensedDistributionConfiguration uses the euro+med marker types for hidden and fallback areas a...
- 06:47 PM Revision 492fde02 (taxeditor): ref #8767: label issues
- 06:23 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
- existing genus name selected, fine.
Name type designation editor opened, fine.
Type selected, fine.
Species name ... - 03:42 PM bug #9475: NameTypeDesignations for existing names in other nom acts can not be created
- please review
- 06:17 PM bug #5206 (Closed): Status symbols in condensed distribution string repeated for subareas
- This should be fixed and can be reviewed together with #8297. It is more or less a duplicate and therefore I close it.
- 06:14 PM bug #9476: SpecimenTypeDesignations for existing names in other nom acts can not be created
- works as expected, ticket can be closed.
- 03:44 PM bug #9476 (Resolved): SpecimenTypeDesignations for existing names in other nom acts can not be created
- 03:43 PM bug #9476 (In Progress): SpecimenTypeDesignations for existing names in other nom acts can not be created
- please review
- 06:06 PM bug #9480: SpecimenTypeDesignationEditor: designationReference --> new should be limited to sections of the publishedUnit
- function as expected, ticket can be closed.
- 03:41 PM bug #9480: SpecimenTypeDesignationEditor: designationReference --> new should be limited to sections of the publishedUnit
- please review
- 01:53 PM bug #9480 (Resolved): SpecimenTypeDesignationEditor: designationReference --> new should be limited to sections of the publishedUnit
- Applied in changeset commit:cdm-vaadin|8195658eef52a7189fd6c622d34b020516db9ed5.
- 05:57 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- Review: Internal error when selecting variety of form, instead of opening a third field for the last epithet.
- 03:40 PM bug #9483: LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- please review
- 02:38 PM bug #9483 (Resolved): LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- Applied in changeset commit:cdmlib|e20135dca8ba5443b97814e31ad18cdc93036865.
- 02:27 PM bug #9483 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor when selecting trinominal rank
- The LIE occurs in `public String rankSpecificNamePart()` at `rank.isHigher(Rank.GENUS())` which internally calls `Or...
- 04:36 PM bug #9482 (Closed): NameTypeDesignationEditor: designationReference --> new causes LIE
- 04:00 PM bug #9482: NameTypeDesignationEditor: designationReference --> new causes LIE
- limitation works already, only the LIE is a problem
- 01:55 PM bug #9482: NameTypeDesignationEditor: designationReference --> new causes LIE
- Currently creating new reference is blockes by a
~~~
org.hibernate.LazyInitializationException: could not initia... - 01:53 PM bug #9482 (Closed): NameTypeDesignationEditor: designationReference --> new causes LIE
- in some cases creating new reference is blocked by a
~~~
org.hibernate.LazyInitializationException: could not in... - 04:36 PM Revision 53c22678 (cdm-vaadin): ref #9482 fixing init strategy for description source reference
- 03:38 PM Revision 5c297207 (cdmlib): ref #9482 fixing init strategy for description source reference
- 03:16 PM Revision 413be67f (cdm-vaadin): fixing compiler problem with generic type var
- 03:10 PM Revision 57902109 (cdm-vaadin): cleanup
- 03:04 PM Revision 891e4775 (cdm-vaadin): cleanup
- 02:37 PM Revision e20135dc (cdmlib): fix #9483 adapting bean initialization in .TaxonNameDaoHibernateImpl.prepareFindTaxonNameParts(..) to new? rank compare
- 01:51 PM Revision 8195658e (cdm-vaadin): fix #9480 SpecimenTypeDesignationEditor: limiting designationReference editing to sections of published unit
- 12:08 PM bug #8297: Fix condensed distribution string for E+M
- ERS:
für native: reported in error gilt das gleiche wie für introduced: reported in error, ein Minus - vor dem Kür... - 12:07 PM bug #9481 (Closed): ObjectDeletedException when swap syn and accepted with descriptions belonging to a descriptive dataset
- While swapping synonym to taxon, the descriptions are cloned but cannot be deleted with the old accepted taxon becaus...
- 11:35 AM bug #5670 (Resolved): Refresh of Taxon Navigator
- I put this to resolved so I have it on the review list.
Before closing the ticket we should create a new ticket for ... - 10:28 AM bug #5670: Refresh of Taxon Navigator
- in #note-7 the steps already solved are described, if there are other issues we should create a new ticket or keep th...
- 11:32 AM feature request #9340 (Resolved): Workflow support for secundum handling when making synonym a new accepted taxon
- I put this ticket to resolved so I have it in the review list. Before closing the ticket we should move open issues t...
- 11:31 AM feature request #9340: Workflow support for secundum handling when making synonym a new accepted taxon
- Can you add a list to the description, which other operations are planned to have this workflow support?
- 10:19 AM feature request #9340: Workflow support for secundum handling when making synonym a new accepted taxon
- please review the already implemented workflows
- 11:24 AM Revision 4770809e (taxeditor): ref 5670: refresh of parent node in navigator after swap accepted and synonym
- 11:19 AM Revision ebe49c04 (taxeditor): adapt order in menu of name editor
- 11:09 AM Revision 1a86c162 (taxeditor): ref 5670: refresh of navigator after swap accepted and synonym
- 11:06 AM Revision 82d445b4 (cdmlib): cleanup and make NPE location clearer
- 10:26 AM bug #7521 (Resolved): refresh of taxonnavigator sometimes does not work for moving taxonnodes
- this should also be fixed while working on #5670
- 10:09 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- works now
- 10:08 AM bug #8198 (Closed): Deleting an image gallery from image gallery view shows wrong configuration dialog
- 08:05 AM bug #8767 (Resolved): Workflow support for publish flag
- implemented the publish check also for accepted to syn.
- 07:55 AM bug #9467 (Closed): AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Andreas Müller wrote:
> Andreas Müller wrote:
> > Multi-select is still possible:
> > 
>
...
02/25/2021
- 05:20 PM bug #9480 (Closed): SpecimenTypeDesignationEditor: designationReference --> new should be limited to sections of the publishedUnit
- 05:15 PM Revision 3776382f (cdm-vaadin): ref #9475 fixing NameTypeDesignations for existing names in other nom acts can not be created
- 04:58 PM bug #9479 (Closed): ToOneRelatedEntityCombobox misses sending ValueChanged events to MBeanFieldGroup
- 03:05 PM bug #9479 (Resolved): ToOneRelatedEntityCombobox misses sending ValueChanged events to MBeanFieldGroup
- Applied in changeset commit:cdm-vaadin|f2a3bcfd9db13c5182ad648cf848d50df85a78d1.
- 03:03 PM bug #9479 (Closed): ToOneRelatedEntityCombobox misses sending ValueChanged events to MBeanFieldGroup
- the SpecimenTypeDesignationDTORow contains the `ToOneRelatedEntityCombobox<Reference> designationReference`
The fie... - 04:25 PM bug #8767: Workflow support for publish flag
- Katja Luther wrote:
> Changing an unpublished accepted to a synonym of an published accepted taxon, how should we ha... - 11:35 AM bug #8767: Workflow support for publish flag
- Changing an unpublished accepted to a synonym of an published accepted taxon, how should we handle this? Keep the pub...
- 09:55 AM bug #8767: Workflow support for publish flag
- By the way, currently this is handled as an info (i) but I think a warning would be better.
- 09:54 AM bug #8767: Workflow support for publish flag
- Andreas Müller wrote:
> Accordingly we should check ALL operations to handle the publish flag correctly.
E.g. als... - 09:49 AM bug #8767: Workflow support for publish flag
- Andreas Müller wrote:
> The message pops up 2x now
I can not reproduce this anymore. - 09:45 AM bug #8767: Workflow support for publish flag
- Andreas Müller wrote:
> The message pops up 2x now
With the actual nightly build I can not reproduce this. - 09:42 AM bug #8767: Workflow support for publish flag
- Accordingly we should check ALL operations to handle the publish flag correctly.
- 09:42 AM bug #8767: Workflow support for publish flag
- Also swapping synonym with accepted has strange behavior: only the names swap but the publish flag stays. E.g. if old...
- 09:26 AM bug #8767 (Feedback): Workflow support for publish flag
- The message pops up 2x now
- 04:23 PM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Andreas Müller wrote:
> Multi-select is still possible:
> 
If this is fixed, yes. - 11:30 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- so we can close this ticket?
- 10:01 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Katja Luther wrote:
> Andreas Müller wrote:
> > Wir sollten auch das Label noch anpassen für beide Fenster.
> >
... - 10:00 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > Im Deutschen: Default Merkmalsbaum => ... - 09:59 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Katja Luther wrote:
> Andreas Müller wrote:
> > Im Deutschen: Default Merkmalsbaum => Standard Merkmalsbaum
Is t... - 09:24 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Andreas Müller wrote:
> Wir sollten auch das Label noch anpassen für beide Fenster.
>
> Im Deutschen: Default Mer... - 09:11 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Außerdem sollten wir die Reihenfolge ändern, die nat. lang. descriptions sind unwichtig, und sollten daher nach unten
- 09:10 AM bug #9467: AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Wir sollten auch das Label noch anpassen für beide Fenster.
Im Deutschen: Default Merkmalsbaum => Standard Merkmal... - 08:56 AM bug #9467 (Feedback): AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Multi-select is still possible:
 - 03:21 PM Revision cc55de8f (cdmlib): cleanup
- 03:21 PM Revision dd4317ec (cdmlib): ref #8297 use CondensedDistributionConfiguration instead -Recipe where possible and improve hidden+fallbackArea handling
- 03:05 PM Revision f2a3bcfd (cdm-vaadin): fix #9479 passing ValueChangedListener add remove to inner lazySelect
- 02:54 PM Revision e67bdcf7 (cdm-vaadin): cleanup
- 02:48 PM bug #9478 (Resolved): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow fails validation
- Applied in changeset commit:cdm-vaadin|36c60299426da3a4ae7f9c90ba0568d8e9e64402.
- 02:41 PM bug #9478 (In Progress): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow fails validation
- 02:38 PM bug #9478 (Closed): required ToOneRelatedEntityCombobox field in SpecimenTypeDesignationDTORow fails validation
- the SpecimenTypeDesignationDTORow contains the `ToOneRelatedEntityCombobox<Reference> designationReference`
When se... - 02:48 PM Revision 36c60299 (cdm-vaadin): fix #9478 fixing validation problem in ToOneRelatedEntityCombobox
- 01:55 PM Revision 7eaf3bb5 (taxeditor): ref #8767: add warning dialog for change acc to syn for different puplish flags - continue
- 12:56 PM Revision 7c96f526 (taxeditor): ref #8767: add warning dialog for change acc to syn for different puplish flags
- 12:55 PM Revision 8bc0e09e (cdmlib): ref #8767: fix publish flag when change accepted to syn
- 12:52 PM Revision 84d9b190 (cdmlib): ref #8767: fix publish flag when swap syn and accepted
- 11:35 AM Revision 39f4b8b1 (cdm-vaadin): cleanup
- 11:28 AM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration dialog
- 10:24 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- Andreas Müller wrote:
> Katja Luther wrote:
> > The configuration wizard is only shown for persisted media now and ... - 10:12 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- Katja Luther wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > The exception is fixed now. However, t... - 10:08 AM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration dialog
- 10:06 AM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- Katja Luther wrote:
> The configuration wizard is only shown for persisted media now and only if media exist.
it ... - 11:23 AM Revision 8f180179 (taxeditor): ref #8767: add warning dialog instead of info dialog
- 11:21 AM Revision fef9b989 (taxeditor): ref #8767: add warning dialog instead of info dialog
- 11:17 AM Revision c0c89a30 (cdm-vaadin): ref #9476 passing citationUuid with SpecimenTypeDesignationWorkingsetIds to editor
- 11:14 AM Revision 7dc4a834 (cdm-vaadin): ref ##9476 passing citationUuid with SpecimenTypeDesignationWorkingsetIds to editor
- 10:36 AM Revision 245b2535 (cdmlib): ref #9475 fixing problems caused by implementation for #9324 - changing NameTypeDesignationWorkingsetIds strategy again - cdmlib part
- 10:35 AM Revision d47bbcb9 (cdm-vaadin): cleanup
- 10:32 AM Revision 73c98fbf (taxeditor): ref #8767: add warning also for move syn and swap syn and accepted
- 10:27 AM bug #9477 (Closed): New ordered terms do not have correct order index
- If a new term is added to a new ordered term vocabulary the term is not put to the correct position. Instead it is mo...
- 10:23 AM Revision e086828e (taxeditor): ref #8198: correct handling of empty gallery
- 09:56 AM Revision 4a39cb5e (taxeditor): ref #9467: do not allow multiselect and order of elements
02/24/2021
- 11:15 PM bug #8297: Fix condensed distribution string for E+M
- AM:
für folgende Status bräuchte ich noch die korrekten Symbole:
• native: reported in error => „-“ ? Genaus... - 04:07 PM bug #8297: Fix condensed distribution string for E+M
- ERS (2020-06-23):
Unterareale sollten ja eigentlich in Klammern nach dem Hauptareal zusammengefasst werden, also d... - 03:27 PM bug #8297: Fix condensed distribution string for E+M
- Bellis perennis on test: http://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/taxon/0eb6ca37-3365-4af5...
- 10:03 PM feature request #3816 (Resolved): Create "Undefined" status and choose it for NULL status
- I added the term. We should split the update script to another ticket.
- 05:39 PM feature request #3816: Create "Undefined" status and choose it for NULL status
- The new status should be last in vocabulary as discussed for ordering in E+M
- 05:37 PM feature request #3816: Create "Undefined" status and choose it for NULL status
- use uuid from E+M undefined status and move E+M term to existing vocabulary
- 10:00 PM Revision 8b7c16f0 (cdmlib): ref #3816, ref #8858 add "undefined" to PAT vocabulary
- 06:08 PM bug #9476 (Closed): SpecimenTypeDesignations for existing names in other nom acts can not be created
- this is a regression caused by the changes made for #9324
To reproduce
* in registration workingset editor: ... - 06:07 PM bug #9475 (Resolved): NameTypeDesignations for existing names in other nom acts can not be created
- 05:51 PM bug #9475 (Closed): NameTypeDesignations for existing names in other nom acts can not be created
- this is a regression caused by the changes made for #9324
To reproduce
* in registration workingset editor: ... - 05:53 PM Revision bd6037c5 (cdm-vaadin): ref #9475 fixing problems caused by implementation for #9324 - changing NameTypeDesignationWorkingsetIds strategy again
- 05:38 PM bug #8858: Ordering of distribution status 'undefined' is not correct in E+M
- Another solution is implementing #3816
- 05:20 PM bug #8858 (Resolved): Ordering of distribution status 'undefined' is not correct in E+M
- Fixed by adding ordering by vocabulary uuid to term ordering. This is a preliminary solution until ordering via order...
- 05:16 PM Revision b553ef04 (cdmlib): ref #8858 ordering of terms from different vocabularies use voc.uuid as vocabulary order attribute (fix ordering of "undefined" status in E+M)
- 04:57 PM feature request #5779 (Closed): Update EuroPlusMedCondensedDistributionComposer to use new symbol field
- This should be fixed by fixing #8297 . E+M condensed distribution uses symbol2 now by default.
- 04:51 PM Revision aeadc9cf (cdmlib): cleanup
- 04:01 PM feature request #3907 (Closed): EuroMed: implement condensed "status" string of distribution information
- This is generally implemented. Open issues (and full refactoring) will be done in #8297
- 03:47 PM Revision a9656555 (cdmlib-apps): fix compile error
- 03:47 PM Revision f87413f4 (taxeditor): cleanup
- 03:35 PM feature request #9474 (New): Creating a new Specimen/FieldUnit in Specimen Tree Editor with taxon association
- When a taxon is selected in specimen tree editor and a new fieldunit/specimen is created, the specimen should have an...
- 03:26 PM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration dialog
- Andreas Müller wrote:
> Andreas Müller wrote:
> > The exception is fixed now. However, the "delete the media data c... - 03:24 PM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration dialog
- 03:23 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- Andreas Müller wrote:
> The exception is fixed now. However, the "delete the media data completely, even if ..." doe... - 03:14 PM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration dialog
- The configuration wizard is only shown for persisted media now and only if media exist.
The exception should not c... - 12:41 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- Also the configuration sould only show up if the image gallery is not empty. This is currently not the case.
And f... - 12:38 PM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration dialog
- The exception is fixed now. However, the "delete the media data completely, even if ..." does not work. The media is ...
- 11:49 AM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration dialog
- this should be fixed.
- 03:15 PM Revision c3e57b69 (taxeditor): avoid NPE
- 03:14 PM Revision e4ddb405 (taxeditor): ref #8198: show config dialog only for persisted media and fix delete media in gallery - continue
- 03:07 PM Revision db83cf0b (taxeditor): ref #8198: show config dialog only for persisted media and fix delete media in gallery
- 01:22 PM Revision 0afdad42 (taxeditor): ref #8767: add information when publish flag of the new taxon differs from the parent - continue
- 12:57 PM bug #9467 (Resolved): AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- Andreas Müller wrote:
> This is fixed and can be closed.
>
> By the way the default feature tree preference page ... - 12:56 PM Revision db56c41b (taxeditor): ref #9467: do not allow multi select
- 12:33 PM bug #8767 (Resolved): Workflow support for publish flag
- Andreas Müller wrote:
> Katja Luther wrote:
> > I also adapted the changeSynonymToAcceptedTaxon, the newly created ... - 12:32 PM Revision 373576f7 (taxeditor): ref #8767: add information when publish flag of the new taxon differs from the parent
- 12:27 PM bug #9465 (Closed): Open in ... NameEditor for orphan taxa results in CCE
- Looks ok now
- 11:43 AM bug #9465 (Resolved): Open in ... NameEditor for orphan taxa results in CCE
- Andreas Müller wrote:
> I can't see that any exception is thrown now ...
missed to commit DefaultOpenTaxonEditorF... - 10:51 AM bug #9465 (Feedback): Open in ... NameEditor for orphan taxa results in CCE
- I can't see that any exception is thrown now ...
- 10:14 AM bug #9465 (Resolved): Open in ... NameEditor for orphan taxa results in CCE
- Andreas Müller wrote:
> Is fixed.
> Maybe we should think about an interface IHasUuid to avoid having generics like... - 12:14 PM Revision 7f7649e0 (cdm-dataportal): ref #8297 adapt dataportal code to new condensed distribution string handling
- 11:47 AM bug #9472 (Closed): Encoding problem with ProxyUtils.CollectionType leading to failing lazy collection loading
- looks fine and works as expected (tested on turkish os)
- 11:46 AM Revision 849b38e8 (taxeditor): ref #5670: refresh of navigator for updated node
- 11:23 AM Revision c9ad48b6 (taxeditor): code cleaning
- 10:53 AM Revision ee472ec0 (taxeditor): ref #9465: throw exception if object is not taxon or UuidAndTitleCache
- 10:32 AM bug #5670: Refresh of Taxon Navigator
- is this fixed/for review? If not can you leave a note on open issues?
- 10:16 AM feature request #9427 (Closed): Code cleaning in CdmPreferenceCache
- looks fine
- 10:13 AM Revision 8d45fe05 (taxeditor): ref #9465: throw exception if object is not taxon or UuidAndTitleCache
- 08:56 AM Revision 4224661e (cdmlib): ref #9340: fix NPE
- 08:24 AM Revision ae13fa54 (cdmlib): ref #9340: adapt service methods to secundum workflow - adapt tests
02/23/2021
- 11:16 PM Revision a6527252 (cdmlib): ref #8297 some minor adaptations and adding taggedText to CondensedDistribution bean
- 11:15 PM Revision 92699374 (cdmlib): cleanup
- 10:14 PM Revision ac1f39b4 (cdmlib): ref #8297 make isAnyIntroduced transient
- 06:20 PM Revision ec7eaac5 (cdmlib): ref #8297 refactor condensed distribution string handling
- 06:20 PM Revision 00103853 (cdmlib): cleanup
- 06:15 PM Revision b02474e5 (cdmlib): ref #9340: adapt service methods to secundum workflow - adapt tests
- 06:11 PM Revision d75abe5d (cdmlib): ref #9340: adapt service methods to secundum workflow
- 03:57 PM feature request #9340 (In Progress): Workflow support for secundum handling when making synonym a new accepted taxon
- the workflow for change synonym to accepted and accepted to synonym is adapted.
- 03:54 PM Revision 44000ac1 (taxeditor): ref #9340: workflow for changing synonym to acc and acc to synonym
- 01:50 PM EDIT Platform Etablierung report #9378 (Closed): Meeting EDIT Platform documentation 2021-02-22
- **Ergebnisprotokoll** des Meetings: https://wiki.bgbm.org/bdinotes/index.php/BDI_299
- 11:27 AM Revision 9c170b09 (cdmlib): use full semantic for PresenceAbsenceTerm uuids
02/22/2021
- 08:02 PM Revision 58358572 (taxeditor): ref #8198: fix ConcurrentModificationException - continue
- 07:51 PM Revision 5e3747b3 (taxeditor): ref #8198: fix ConcurrentModificationException
- 07:48 PM Revision 299adb56 (taxeditor): ref #9340: secundum ref workflow for synonym to taxon
- 05:33 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- please call pull before fixing as I did code cleaning
- 05:32 PM bug #8198 (Feedback): Deleting an image gallery from image gallery view shows wrong configuration dialog
- If deleting even if media is linked a concurrent modification is thrown due to this code:
~~~
... - 05:30 PM Revision 0c9893d5 (taxeditor): ref #8198 adapt message for deleting image
- 05:29 PM Revision d847c874 (taxeditor): cleanup
- 04:55 PM Revision 6bbbc666 (taxeditor): cleanup
- 04:47 PM bug #9467 (Feedback): AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- This is fixed and can be closed.
By the way the default feature tree preference page allows multi-select (but stor... - 04:29 PM bug #9465 (Feedback): Open in ... NameEditor for orphan taxa results in CCE
- Is fixed.
Maybe we should think about an interface IHasUuid to avoid having generics like "extends DefaultOpenHandle... - 04:22 PM bug #9374 (Closed): ClassCastException when switching between media
- Difficult to test as it appears from time to time. So I think we can close this and reopen if it appears again.
- 04:21 PM bug #9471 (Closed): Widget is disposed exception when switching away from media before details view is completely loaded
- I couldn't reproduce it anymore by testing a few images I guess it is fixed. Reopen if it appears again.
- 04:17 PM bug #9466 (Closed): Termselection preference pages do not check the elements
- Seems to work.
- 10:38 AM feature request #9473 (New): Support moving images to new taxa similar to facts
- For a long time it is possible to move single facts or full description from one taxon to another taxon. This is curr...
02/19/2021
- 05:21 PM Revision 44c1cf4c (cdmlib): cleanup TermNodeDto
- 05:09 PM Revision 15054273 (taxeditor): fix potential NPEs
- 05:06 PM Revision 067af2dc (taxeditor): cleanup
- 11:41 AM bug #7107: "Omit level" (TDWG Level2) in distribution hierarchy should not supress distributions source reference
- Andreas Kohlbecker wrote:
> Hallo Andreas, ich denke das ist auch für Euro+Med releveant, oder?
>
> Wenn ja, soll... - 11:11 AM bug #9472: Encoding problem with ProxyUtils.CollectionType leading to failing lazy collection loading
- Please review.
- 11:08 AM bug #9472 (Resolved): Encoding problem with ProxyUtils.CollectionType leading to failing lazy collection loading
- Applied in changeset commit:cdmlib|707e14fada836b1ff3fe6e83d0de6508baeb2bc6.
- 11:07 AM bug #9472 (Closed): Encoding problem with ProxyUtils.CollectionType leading to failing lazy collection loading
- The method
~~~
return this.name().toLowerCase();
~~~
seems to be encoding dependend, leading e.g. in Turkisc... - 11:08 AM Revision 707e14fa (cdmlib): fix #9472 fix encoding issue in ProxyUtils.CollectionType.toString()
- 11:08 AM Revision f7f95e38 (cdmlib): cleanup
02/18/2021
- 03:06 PM Revision 7c11179c (taxeditor): add class information to exception -fix compilation error
- 03:03 PM Revision e6989719 (taxeditor): add class information to exception
- 12:52 PM bug #9466 (Resolved): Termselection preference pages do not check the elements
- This should be fixed, please review.
- 10:58 AM Revision 69d28708 (cdmlib): ref #8198: add possibility to delete a list of media
- 10:45 AM Revision ab7d0888 (taxeditor): ref #8198: l10n file adaptions
- 10:31 AM bug #8198 (Resolved): Deleting an image gallery from image gallery view shows wrong configuration dialog
- For the gallery the dialog explicitly say that the gallery still contains media data and ask how to handle them. Plea...
- 10:29 AM Revision 4da7c81b (taxeditor): ref #8198: show media delete config wizard only for galleries with media
02/17/2021
- 02:08 PM Revision 0c247ba9 (taxeditor): add additional debugging in AbstractPersistentCollection
- 12:42 PM Revision 628f1778 (taxeditor): cleanup
- 12:40 PM Revision 96576957 (taxeditor): remove svnignore from etc/jetty
- 12:36 PM Revision c2e26de3 (taxeditor): ref #9359 update spring version in remotingApplicationContext and testRemotingApplicationContext.xml
- 12:31 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- If this is in progress should we move it to current milestone?
- 12:31 PM bug #8198: Deleting an image gallery from image gallery view shows wrong configuration dialog
- For existing images we need the delete dialog that is true. I have not checked how the current dialog looks like but ...
- 12:25 PM bug #8198 (In Progress): Deleting an image gallery from image gallery view shows wrong configuration dialog
- 10:03 AM bug #8297: Fix condensed distribution string for E+M
- Diskussion mit AK über handling des CondensedDistributionString im Portal:
Derzeit werden Teile des Strings hardco... - 09:09 AM bug #8297 (In Progress): Fix condensed distribution string for E+M
- AM:
Wenn die Subareale beide z.B. indigenous sind, aber unterschiedliche Status haben, sollen die Hauptareale dann... - 09:08 AM bug #8297: Fix condensed distribution string for E+M
- AM:
Wenn es für ein Areal Unterareale gibt und diese haben einmal einen indigenous und einmal einen „foreign“ Sta...
02/16/2021
- 05:04 PM bug #9471 (Resolved): Widget is disposed exception when switching away from media before details view is completely loaded
- yes, this should be resolved. Please review.
- 04:48 PM bug #9471: Widget is disposed exception when switching away from media before details view is completely loaded
- is this resolved? (you mention it in #9374)
- 01:57 PM bug #9471 (Closed): Widget is disposed exception when switching away from media before details view is completely loaded
- When the media details view is not completely loaded and clicking on another element a "widget is disposed exception"...
- 04:49 PM Revision 32ca3eb7 (taxeditor): ref #9466: avoid NPE
- 02:28 PM bug #9374: ClassCastException when switching between media
- After fixing #9471 the problem seems to be fixed. Please have a look whether you still can reproduce the exception.
- 02:24 PM Revision 4e80230e (taxeditor): ref #6229: multilanguage support for media details view
- 02:02 PM Revision 2ab78f11 (taxeditor): ref #9471: avoid widget is disposed for media details view
- 10:17 AM task #9359 (In Progress): Update cdmlib, taxeditor, cdmserver etc. dependencies
- 08:02 AM bug #9468: specimen type of existing name cannot be saved
- this seems to be a problem which stems from incomplete solution of #9290
- 08:01 AM bug #9468 (In Progress): specimen type of existing name cannot be saved
- This sees to happen with newly created registrations only.
~~~~
07:50:46.162 [phycobank] [qtp599984672-30] ERROR ... - 07:38 AM bug #9470 (Resolved): CollectionDTO constructor prevent from circles
- Applied in changeset commit:cdmlib|85d748e1311f1b1045ea33d07ebf5f0beb55e359.
- 07:30 AM bug #9470 (Closed): CollectionDTO constructor prevent from circles
- The constructor of CollectionDTO is being called recursively, to initialize also super collections.
Prevent from end... - 07:38 AM Revision 85d748e1 (cdmlib): fix #9470 preventing circular calls of CollectionDTO constructor
02/15/2021
- 09:05 PM bug #7529: Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
- Andreas Müller wrote:
> Have you also checked that no ROLE_PUBLISH with wrong UUID exists in existing production DBs... - 04:15 PM bug #7529: Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
- Have you also checked that no ROLE_PUBLISH with wrong UUID exists in existing production DBs? (see ticket description)
- 05:12 PM Revision 0495b764 (taxeditor): ref #9359 remove taxeditor.local...config.properties
- 05:12 PM Revision 790c4cdf (taxeditor): ref #9359 remove taxeditor.cdmlib...localApplicationContext.xml / taxeditor.local...editorApplicationContext.xml and taxeditor.store...editorApplicationContext.xml
- 04:16 PM Revision a56689b9 (cdmlib-apps): cleanup
- 04:16 PM Revision e0f4dbe9 (cdmlib-apps): ref #7529 adapt new ROLE_PUBLISH constant name in cdmlib-app
- 03:52 PM bug #9469 (Closed): Searching for a UUID in bulkeditor which does not belong to a record throws an exception
- When searching for such a UUID a record is shown in the table but when clicking on the record the following exception...
- 03:36 PM bug #9468 (Worksforme): specimen type of existing name cannot be saved
- Test version:
existing name selected (ok)
specimen type entered including all mandatory fields (ok)
saving the rec... - 03:34 PM feature request #9296: Preference to show/not show infrageneric epithet for species
- WGB:
ist schon merkwürdig – ich bin mir eigentlich sicher, dass es das früher (bei botanischen Namen) nicht gab. E... - 02:22 PM Revision 4725da43 (cdm-vaadin): jenkins bumping cdmlib.version to 5.21.0-SNAPSHOT
- 02:22 PM Revision 10df87e2 (cdm-vaadin): jenkins bumping cdmlib.version to 5.22.0-SNAPSHOT
- 01:24 PM Revision ea7ae629 (taxeditor): cleanup editor code: remove DeleteHandlerE4 and keep RemotingDeletehandlerE4
- 09:05 AM Revision 0ac54bf4 (taxeditor): minor
02/12/2021
- 03:52 PM Revision 476ffd3e (taxeditor): ref #5670: when updating a taxon update only the corresponding node in navigator
- 03:51 PM bug #5670: Refresh of Taxon Navigator
- Refresh only the handled taxonnode for changes in taxa or names.
- 11:46 AM bug #8970 (Worksforme): Moving a taxon to another position often closes the parent nodes
- This seems to be fixed in the meanwhile, I can not reproduce it anymore.
- 11:38 AM bug #9467 (Resolved): AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- This should be fixed, please review.
- 09:19 AM bug #9467 (Closed): AssertionFailedException when opening DefaultFeatureTreePreference and preference should not allow multi-select
- The label provider for DefaultFeatureTreePreferences implements IBaseLabelProvider but should ILabelProvider.
~~~ ... - 11:29 AM Revision 731536ea (taxeditor): fix #9465: correct handling for open in taxa from search view
- 11:28 AM bug #9465: Open in ... NameEditor for orphan taxa results in CCE
- This should be fixed. Please review.
- 11:27 AM bug #9465 (Resolved): Open in ... NameEditor for orphan taxa results in CCE
- Applied in changeset commit:taxeditor|731536ea445abf9f0ef923b21913ef545c6305d4.
- 09:51 AM Revision 1acdebbf (cdmlib): new preference predicate for default sec handling
- 09:40 AM Revision 15647253 (cdmlib): add test for uuidAndTitleCache in TaxonNodedao and code cleau
- 09:32 AM Revision ac14d421 (cdm-dataportal): ref #9463 attempt to isolate jquery versions - not yet successful
- 09:31 AM Revision 793d6004 (cdm-dataportal): updating poms for 5.21.0-SNAPSHOT development
- 09:29 AM Revision d3ba2bcd (cdm-dataportal): ref #9463 improving documentation
- 09:29 AM Revision cc5d96f8 (cdm-dataportal): ref #9463 upgrading universalviewer to v3.1.1
- 09:29 AM bug #9463: UniversalViewer causes jQuery version conflict and breaks maps
- work in progress in branch #9463-universalviewer-jquery-conflict
- 09:28 AM Revision 4a2263a6 (taxeditor): ref #9467: TermTreeLabelProvider should implement ILabelProvider
- 09:13 AM Revision 5f7c9e3b (taxeditor): ref #9466: fix checking selected elements in term preference page
- 09:09 AM Revision b4b868f8 (cdm-dataportal): ref #9463 attempt to isolate jquery versions - not yet successful
- 09:06 AM Revision 1f23ce61 (cdm-dataportal): ref #9463 improving documentation
- 09:04 AM Revision b0b51399 (cdm-dataportal): ref #9463 upgrading universalviewer to v3.1.1
- 09:02 AM bug #9466 (Closed): Termselection preference pages do not check the elements
- The preference pages for term selection do not show the selected terms when opening. Saving of a new selection works ...
02/10/2021
- 10:51 PM Revision 6eee71ca (cdm-vaadin): cleanup
- 04:58 PM bug #9465 (Closed): Open in ... NameEditor for orphan taxa results in CCE
- For orphan taxa "open in... " presents the possibility NameEditor but this results in a ClassCastException:
~~~ te... - 11:57 AM bug #9461: Filter in vaadin distribution editor does not work
- Andreas Müller wrote:
> The last commit seems to fix this issue. Can you please review.
Code changes look good. A... - 10:21 AM bug #6383 (In Progress): fatal error on git push: The remote end hung up unexpectedly
- bothered and thus "motivated" by the severe problems during the last two releases I returned to this issue.
For th... - 10:07 AM Revision c3aec859 (taxeditor): removing .classpath file from merge strategy configuration - file is no longer in git
- 10:04 AM Revision 266a4ad3 (taxeditor): configuring eu.etaxonomy.taxeditor.printpublisher/build.properties with merge=ours
- 09:58 AM feature request #9464 (Duplicate): Show all team members in agent selection dialog
- This is very much related to #9326. Generelly we should store all authors in titleCache, not only the first3 or 4. On...
- 09:05 AM feature request #9464 (Duplicate): Show all team members in agent selection dialog
- TitleCache of teams does not contain all team members therefore it is difficult to differ teams with same first team ...
- 09:58 AM feature request #9326: Show all authors in bibliographic references
- Generally all authors should be stored in Agent.titleCache as mentioned in #9464. So we need to implement it there fi...
- 09:56 AM Revision e7ac6a0e (taxeditor): fixing wrongly merged version numbers (AK)
- 09:50 AM Revision 12749d66 (taxeditor): Merge branch 'release/5.20.0' into develop
- Conflicts:
eu.etaxonomy.taxeditor.printpublisher/build.properties - 09:40 AM Revision 13277946 (cdm-server): Merge branch 'release/5.20.0' into develop
- 09:39 AM Revision 2b90c630 (cdm-server): updating poms for branch'release/5.20.0' with non-snapshot versions
- 09:38 AM Revision 8431c272 (cdm-webapp): Merge branch 'release/5.20.0' into develop
- 09:38 AM Revision 6ab62982 (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
- 09:38 AM Revision f1fdc36e (cdm-webapp): updating poms for branch'release/5.20.0' with non-snapshot versions
- 09:38 AM Revision 9970e989 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.20.0
- 09:38 AM Revision 91002240 (cdm-vaadin): Merge branch 'release/5.20.0' into develop
- 09:38 AM Revision f3bbf62c (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
- 09:36 AM Revision 02724e26 (taxeditor): Merge branch 'release/5.20.0'
- 09:34 AM Revision eacbd577 (cdm-dataportal): updating poms for branch'release/5.20.0' with non-snapshot versions
- 09:34 AM Revision 090aecb0 (cdm-vaadin): updating poms for branch'release/5.20.0' with non-snapshot versions
- 09:34 AM Revision a85f6615 (cdm-dataportal): release-preparation: production level css
- 09:34 AM Revision f7a2f252 (cdm-vaadin): jenkins bumping cdmlib.version to 5.20.0
- 09:34 AM Revision f1f7cac5 (cdmlib): Updating develop poms back to pre merge state
- 09:34 AM Revision c717d03a (cdmlib): Merge branch 'master' into develop
- 09:34 AM Revision a6cd7091 (cdmlib): updating develop poms to master versions to avoid merge conflicts
- 09:33 AM Revision 1afea7af (cdmlib): Merge branch 'release/5.20.0'
- 09:18 AM Revision 61eb8f33 (cdmlib): updating poms for branch'release/5.20.0' with non-snapshot versions
- 09:14 AM Revision 5d6e7996 (taxeditor): Updated version in pom / project files to taxeditor version : 5.21.0-SNAPSHOT and cdmlib version : 5.21.0-SNAPSHOT
- 09:14 AM Revision 3ff4bb64 (taxeditor): Updated version in pom / project files to taxeditor version : 5.20.0 and cdmlib version : 5.20.0
- 08:58 AM Revision d5cbb74e (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.20.0-SNAPSHOT
- 08:58 AM Revision ce822a40 (cdm-webapp): updating poms for 5.21.0-SNAPSHOT development
- 08:58 AM Revision b31071bc (cdm-webapp): updating poms for 5.20.0 branch with snapshot versions
- 08:58 AM Revision 3d3ae548 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.21.0-SNAPSHOT
- 08:56 AM Revision 2345a6b8 (cdm-vaadin): jenkins bumping cdmlib.version to 5.20.0-SNAPSHOT
- 08:56 AM Revision 3f36a33a (cdm-vaadin): updating poms for 5.21.0-SNAPSHOT development
- 08:56 AM Revision bcb95b6c (cdm-vaadin): updating poms for 5.20.0 branch with snapshot versions
- 08:56 AM Revision a2533843 (cdm-vaadin): jenkins bumping cdmlib.version to 5.21.0-SNAPSHOT
02/09/2021
- 04:18 PM bug #9461 (Resolved): Filter in vaadin distribution editor does not work
- The last commit seems to fix this issue. Can you please review.
- 10:53 AM bug #9461 (Resolved): Filter in vaadin distribution editor does not work
- Previously the filter in the distribution editor did throw an exception (see #7254 and #9457). This is not the case a...
- 04:16 PM bug #9457 (Closed): Distribution editor: Taxon filter broken due to invalid HQL in TaxonNodeServiceImpl.getUuidAndTitleCache()
- I created a new ticket for the non-working filter: #9461 . So I think we can close this ticket.
- 03:43 PM Revision 8716ab07 (cdm-vaadin): updating poms for 5.21.0-SNAPSHOT development
- 03:43 PM Revision 8bdb22c3 (cdm-vaadin): updating poms for 5.20.0 branch with snapshot versions
- 03:42 PM Revision 5d7f85d9 (cdm-vaadin): jenkins bumping cdmlib.version to 5.21.0-SNAPSHOT
- 03:42 PM Revision 2a7584b5 (cdm-dataportal): updating poms for 5.21.0-SNAPSHOT development
- 03:42 PM Revision 22c02b72 (cdm-server): updating poms for 5.21.0-SNAPSHOT development
- 03:39 PM Revision 1e333422 (cdmlib): updating poms for 5.21.0-SNAPSHOT development
- 02:12 PM Revision 4672fa5f (cdm-vaadin): ref #9461 try to fix not working filter by using dto not dtos
- 02:12 PM Revision 4ad518e4 (cdm-vaadin): cleanup
- 01:43 PM bug #9463 (In Progress): UniversalViewer causes jQuery version conflict and breaks maps
- 11:46 AM bug #9463 (In Progress): UniversalViewer causes jQuery version conflict and breaks maps
- When taxon pages are configured tab-less the image-viwer (Universalviewer - UV) is shown together with maps on the sa...
- 12:01 PM Revision 5027d200 (cdmlib): Revert "ref #7529 adding PUBLISH group to FirstDataInserter - handing case when group with same name exists"
- This reverts commit 5b133131725616c83c01e16e8bb5acca008ed33e.
- 12:01 PM Revision e74a407f (cdmlib): Revert "ref #7529 adding PUBLISH group to FirstDataInserter - handing case when group with same name exists"
- This reverts commit c5893c96fc9ee990944ec5f5f75bf0ba29bce428.
- 11:36 AM bug #9462 (New): polytomous key generated from structured descriptions supported
- Example:
https://test.e-taxonomy.eu/dataportal/preview/caryophyllales_spp/cdm_dataportal/polytomousKey/f36b96a1-92... - 11:19 AM bug #7254 (Worksforme): Filter in vaadin distribution editor throws exception
- An exception is not thrown anymore. However, the filter still does not work, therefore a new ticket was opened: #9461.
- 11:07 AM Revision e6d5c3e2 (cdmlib): ref #9457 , ref #9461 fix incorrect handling of AND/OR logic in doubtfulPattern handling in TaxonNodeDaoHibernateImpl.getUuidAndTitleCache
- 11:00 AM Revision c5893c96 (cdmlib): ref #7529 adding PUBLISH group to FirstDataInserter - handing case when group with same name exists
- 10:55 AM bug #9143: Distribution data sources are missing if multiple distributions exist
- ERS: Hi, this looks good now on the test portal for the mentioned areas.
- 10:02 AM bug #9143 (Closed): Distribution data sources are missing if multiple distributions exist
- I tested on test https://test.e-taxonomy.eu/dataportal/preview/euromed/cdm_dataportal/taxon/229a548c-fec8-4f15-9058-8...
- 10:37 AM Revision 5b133131 (cdmlib): ref #7529 adding PUBLISH group to FirstDataInserter - handing case when group with same name exists
- 09:57 AM bug #7529 (Closed): Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
- verified at some test databases: works as expected.
- 09:39 AM bug #6324 (Closed): fix dozer mapping after removal of synonym relations and after using TaxonNode
- 09:29 AM bug #6324: fix dozer mapping after removal of synonym relations and after using TaxonNode
- Andreas Müller wrote:
> No there is no custom converter in use yet for field taxonNodes. But ofcourse we use it else... - 08:36 AM task #9460 (New): REST API tests
- see #9459 for general considerations which also apply to this task, at least to a significant extend.
- 08:17 AM task #9459 (New): REST API tests for UTIS
- There is already a test suite http://int.e-taxonomy.eu/jenkins/job/utis-jmeter-tests/ which could be repaired.
Oth... - 12:50 AM Revision 7ceaa4ea (cdmlib): cleanup
- 12:48 AM Revision 99cb169f (cdmlib): unignore FloraCubaCondensedDistributionComposerTest
02/08/2021
- 11:14 PM Revision 9697d9fc (cdmlib): add missing cultivated presence questionable term to test terms (to fix failing CubaCondensedDistributionTest)
- 10:48 PM Revision f6e4b1b3 (cdmlib): fix duplicated uuid and remove all created information from test terms
- 10:18 PM Revision 53b5dc9b (cdmlib): add missing reported in error term to test terms (to fix failing CubaCondensedDistributionTest
- 09:13 PM Revision 262288e1 (cdmlib): revert removing UTF-8 from EuroPlusMedCondensedDistributionComposer
- 07:07 PM bug #9443 (Closed): Improve handling of TissueSamples and others in SpecimenTreeEditor
- looks fine and works as expected.
- 10:57 AM bug #9443: Improve handling of TissueSamples and others in SpecimenTreeEditor
- Katja, can you check the commits of this ticket again if they look ok? Generally this ticket was reverted, however th...
- 10:55 AM bug #9443: Improve handling of TissueSamples and others in SpecimenTreeEditor
- The commit message of the last commit "handling tissue samples as DerivedUnit" was incorrect. Should be "**revert** h...
- 07:01 PM bug #5670 (In Progress): Refresh of Taxon Navigator
- First issues:
- add a parameter whether the navigator should be updated or not.
- do not refresh the navigator ... - 05:04 PM Revision a76f9136 (cdmlib): simplify grouping in EuroPlusMedCondensedDistributionComposer
- 05:03 PM Revision 20e0055b (cdmlib): cleanup
- 04:54 PM Revision 6b579e4a (cdmlib): ref #7287 unignore tests on CondensedDistributionComposerBase subclasses
- 04:54 PM Revision 2dae2fcc (cdmlib): cleanup
- 04:49 PM bug #7287: Unit tests using the DefaultTermInitializer break subsequent integration tests in the suite
- Andreas Kohlbecker wrote:
> After using the new unit test base class TermTest for all test which need the terms to b... - 04:27 PM bug #9457 (Feedback): Distribution editor: Taxon filter broken due to invalid HQL in TaxonNodeServiceImpl.getUuidAndTitleCache()
- I aimed in testing the fix in the vaadin distribution editor itself ... the exception no longer occurs but no taxon r...
- 11:15 AM bug #9457: Distribution editor: Taxon filter broken due to invalid HQL in TaxonNodeServiceImpl.getUuidAndTitleCache()
- By the way, please do not use the "cdmlib - Next Major Release" anymore. It is deprecated and will be closed soon, af...
- 11:13 AM bug #9457: Distribution editor: Taxon filter broken due to invalid HQL in TaxonNodeServiceImpl.getUuidAndTitleCache()
- Can you please review. I only fixed in theory, did not test.
- 10:47 AM bug #9457 (Resolved): Distribution editor: Taxon filter broken due to invalid HQL in TaxonNodeServiceImpl.getUuidAndTitleCache()
- Applied in changeset commit:cdmlib|e0e956a86c917a9f70f0acbbd03eaebc2a7535cc.
- 10:29 AM bug #9457 (Closed): Distribution editor: Taxon filter broken due to invalid HQL in TaxonNodeServiceImpl.getUuidAndTitleCache()
- to reproduce:
* http://api.cybertaxonomy.org/flora-cuba/app/distribution
* Enter any string into the Taxon filter... - 03:22 PM bug #7529 (Resolved): Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
- Applied in changeset commit:cdmlib|b8dd2aa39122e68351a1591e11a4dc12751fdc2e.
- 03:21 PM Revision b8dd2aa3 (cdmlib): fix #7529 adding PUBLISH group to FirstDataInserter
- 02:59 PM bug #9351 (Closed): Include new locations for cdmlib-print and cdmlib-remote in jenkins release script
- fixed in server-scripts:
~~~
svn ci -m "ref #9351 support for setting version in multiple projects & fixing some... - 12:04 PM task #9448 (In Progress): Remove all not e4 classes and rename "Remoting..." classes
- KL:
soweit ich es sehe, betraf das vor allem das io package, ich habe das aufgeräumt. An anderer Stelle habe ich n... - 11:48 AM bug #6324: fix dozer mapping after removal of synonym relations and after using TaxonNode
- No there is no custom converter in use yet for field taxonNodes. But ofcourse we use it elsewhere e.g. here
~~~
... - 10:14 AM bug #6324: fix dozer mapping after removal of synonym relations and after using TaxonNode
- I could not inspect all code changes in depth as this would require more time to dive into the whole topic of relatio...
- 11:15 AM bug #6450 (Resolved): New reference with only the protected titleCache set is not found in reference select dialog
- The problem was that if no abbrevTitle exists the titleCache was used, now the abbrevTitleCache.
- 11:15 AM Revision 9c32f328 (taxeditor): ref #6450: show abbrev titlecache in nomenclatural ref selection dialog for new reference
- 11:11 AM Revision 6ca6c48f (cdmlib): cleanup
- 11:11 AM Revision 1606ebde (cdmlib): ref #9457 fix missing space in HQL (cont.)
- 10:47 AM Revision e0e956a8 (cdmlib): fix #9457 fix missing space in HQL
- 10:45 AM task #9458 (Closed): Consider lower zoom level as default
- currently the default zoom level for maps is `15`
This causes two problems with occurrence maps
* some maps onl... - 09:02 AM bug #9456: Sources of Descriptive Datasets visible
- This is more or less a duplicate for #7716. We should think about closing it as a duplicate. This is not true if we r...
- 08:54 AM bug #9456 (New): Sources of Descriptive Datasets visible
- Sources of Descriptive Datasets are not yet shown in the Dataportal.
"Derzeit werden alle Datasets gemerged und di...
02/06/2021
- 10:10 PM feature request #9427: Code cleaning in CdmPreferenceCache
- I did some further reduncancy removal. Please check the code and test once if loading still works as expected. Then w...
- 10:09 PM Revision 543d3926 (taxeditor): ref #9427 further remove redundant code by parameterized method call
- 10:07 PM Revision 3395c0c6 (taxeditor): cleanup
- 09:54 PM bug #9143 (Resolved): Distribution data sources are missing if multiple distributions exist
- 09:33 PM Revision 4681378d (cdmlib): rename method
- 09:32 PM Revision 8b352348 (cdmlib): fix compilation issue in SetMap
- 09:11 PM Revision 6c6272d1 (cdmlib): cleanup
- 09:03 PM Revision a8de3c3c (cdmlib): ref #9143 rename variable name for preferComputed->preferAggregated and update javadocs
- 08:45 PM Revision f20e21fb (cdmlib): ref #9143 remove preferComputed rule as default from calling DefilterDistributions.filterDistributions(...) methods
- 08:38 PM Revision 990da774 (cdmlib): use SetMap in DescriptionUtility
- 06:44 PM feature request #5575 (Resolved): DNA Sample requires CacheStrategy
02/05/2021
- 06:47 PM feature request #9434 (Closed): Add pollen, leaf and trichomes to tissue sample kind-of-unit vocabulary
- New terms are available on test server instances. So it sees to work and I close the ticket.
- 06:45 PM bug #9426 (Closed): Set publish flag for Synonyms in accordance with accepted taxon publish flag
- Works as expected
- 06:39 PM bug #5095 (Closed): Fix failing dozer related tests
- I fixed the variable name.
http://memory.loc.gov testing is not part of this ticket therefore I close this ticket.... - 10:35 AM bug #5095: Fix failing dozer related tests
- code changes look good, test are all successful so the ticket is solved and can be closed.
I am a bit concerned th... - 06:36 PM Revision ded02d5b (cdmlib): ref #5095 fixing variable name for oahServerURI
- 06:04 PM feature request #5575: DNA Sample requires CacheStrategy
- As TissueSample are currently still handled as DnaSample modellwise (to allow adding of sequences directly without Dn...
- 06:02 PM task #9455 (New): Merge DnaSample and DerivedUnit
- In general we do not want to have too many classes to avoid transformation problems and for other reasons (see TaxonN...
- 05:56 PM bug #9443: Improve handling of TissueSamples and others in SpecimenTreeEditor
- Still need to check if AddXXX handlers now work as expected and as before.
- 05:55 PM bug #9443 (Resolved): Improve handling of TissueSamples and others in SpecimenTreeEditor
- Saving as DerivedUnit needs to be reverted as we want to allow also TissueSample to have DNA Sequences attached direc...
- 05:51 PM Revision 4fc7f502 (taxeditor): ref #9443 handling tissue samples as DerivedUnit
- 05:50 PM task #9451 (Resolved): Cache strategy for classifications is missing
- Please review
- 05:49 PM task #9451 (New): Cache strategy for classifications is missing
- 05:24 PM task #9454 (New): [DISCUSS] Decide on using dozer or similar frameworks for mapping DTOs
- Dozer or similar frameworks (https://stackoverflow.com/questions/1432764/any-tool-for-java-object-to-object-mapping) ...
- 05:13 PM Revision e141acff (cdmlib): fix #6324 fix taxon node dozer mapping for TDWG Ontology (cont.) - add missing mappings-deep.xml changes
- 04:57 PM bug #6324: fix dozer mapping after removal of synonym relations and after using TaxonNode
- The mapping was not only corrupt for synonyms but also for TaxonNodes as they were not mapped as taxon relations yet....
- 01:26 PM bug #6324 (Resolved): fix dozer mapping after removal of synonym relations and after using TaxonNode
- Applied in changeset commit:cdmlib|f278f0365262de31e73b9f4bf7e442e60e3a60db.
- 04:54 PM Revision 0f6bc0c7 (cdmlib): fix #6324 fix taxon node dozer mapping for TDWG Ontology
- 02:03 PM Revision 3a519edd (taxeditor): fix compile error
- 01:26 PM Revision f278f036 (cdmlib): fix #6324 fix synonym dozer mapping for TDWG Ontology
- 01:22 PM Revision 8ed8ec11 (cdmlib): ref #6324 add toString() methods to TDWG classes for debugging
- 01:21 PM Revision bed99e76 (cdmlib): cleanup
- 11:36 AM feature request #8975 (Closed): Name Status filtered in UI
- 11:31 AM feature request #8975: Name Status filtered in UI
- Yes
- 11:20 AM feature request #8975 (Feedback): Name Status filtered in UI
- Order changed to
~~~
NomenclaturalStatusType.CONSERVED(),
NomenclaturalStatusType.CON... - 11:19 AM Revision 0e53752c (cdm-vaadin): ref #8975 changing order of name status
- 11:11 AM bug #9452: Name Type Editor: allowed combination of fields
- put in version:"Phycobank ready for submitters" when not solved in version:"Release 5.20"
- 11:06 AM bug #9452: Name Type Editor: allowed combination of fields
- solution:
1. radiobuttons for "rejected", "conserved", "Not typified"
2. hide TypeName field when "Not typified" ... - 11:00 AM feature request #9324 (Closed): Enable designation reference editing in name type designation
- > Note 3: proposed types for rejection/conservation with references are missing.
we (Henning & Andreas) decided t... - 10:45 AM feature request #9324: Enable designation reference editing in name type designation
- example for Note 3: proposed types for rejection/conservation with references are missing.
species
Achnanthes... - 10:14 AM feature request #9324 (Feedback): Enable designation reference editing in name type designation
- Wolf-Henning Kusber wrote:
> Allowing null selection for type status in name type designation editor implemented.
>... - 10:00 AM bug #9453 (New): Implement NameDesignationBase.hasDesignationSource() which takes isRejected and isConserved into account
- `TypeDesignationBase.hasDesignationSource()`currently directly delegates to TypeDesignationStatusBase.hasDesignationS...
- 09:47 AM Revision 752dcdec (cdmlib): ref #6714 remove commented hibernate3-maven-plugin from pom
- 08:54 AM bug #8522 (Closed): Make type status mandatory in Name type designation editor
- 08:52 AM feature request #8981 (Feedback): Improve NameStatus in UI
- I see that there are remaining requests like "Reference is restricted to a given list of Codes
Code edition was adde... - 08:45 AM bug #8140 (Feedback): Update list of type designation status which allow an explicit source
- in #9301 Henning
pointed out that: "paralectotype (enabled)-> reference should be disabled like the other paraty... - 08:43 AM feature request #9301 (Closed): SpecimenTypeDesignationEditor: Add fields for citation and citationDetail
- Wolf-Henning Kusber wrote:
> Works as expected.
>
>
> paralectotype (enabled)-> reference should be disabled li... - 08:13 AM bug #9290 (Closed): stop setting Registration.citation as citation for TypeDesignations in all type editors by default
02/04/2021
- 11:56 PM Revision 432b5684 (taxeditor): cleanup
- 11:55 PM Revision 88ff4560 (taxeditor): ref #9359 remove objenesis from TaxEditor
- 11:23 PM Revision af8e4aa7 (cdmlib): ref #9359 remove test scope from objenesis
- 11:05 PM Revision 658ad631 (taxeditor): ref #9359 try to fix compile error in TaxEditor due to missing objenesis class (cont.) - move objenesis from printpublisher to cdmlib
- 10:46 PM Revision 9e42bfa8 (taxeditor): ref #9359 try to fix compile error in TaxEditor due to missing objenesis class
- 10:18 PM feature request #4716 (Closed): Other dependencies to be updated
- 08:51 PM Revision 5db155c8 (cdmlib): ref #9359, ref #5095 upgrade dozer form 5.5.1 to 6.5.0 and use dozer-spring
- 08:46 PM Revision 5b2db12a (cdmlib): cleanup
- 07:36 PM bug #9290: stop setting Registration.citation as citation for TypeDesignations in all type editors by default
- Reference is now selectable in relevant cases, but not anymore a default.
- 07:32 PM feature request #9301: SpecimenTypeDesignationEditor: Add fields for citation and citationDetail
Works as expected.
paralectotype (enabled)-> reference should be disabled like the other paratypes (see above)- 07:15 PM feature request #8981: Improve NameStatus in UI
- The functionality shown in the second screen is implemented and works.
- 07:05 PM feature request #8975: Name Status filtered in UI
- The filtering is fine.
I could live with this order of the filtered terms.
But I would like also:
First the b... - 06:53 PM bug #9452 (Closed): Name Type Editor: allowed combination of fields
- The Name type editor needs some fine tuning:
"not typified" (only) must not combined with a scientific name for lo... - 06:46 PM bug #8522: Make type status mandatory in Name type designation editor
- works as expected, ticket can be closed
- 06:38 PM Revision 45e5e41d (cdmlib): ref #3403 , ref #4716, ref #3332, ref #9359 update dozer to version 5.5.1
- 06:32 PM feature request #9324: Enable designation reference editing in name type designation
- Allowing null selection for type status in name type designation editor implemented.
Is functioning as expected.
... - 06:32 PM bug #5095: Fix failing dozer related tests
- please review
- 06:30 PM bug #5095 (Resolved): Fix failing dozer related tests
- Applied in changeset commit:cdmlib|523a6c95979f449c49f9723f7d080d3cf6013cf8.
- 06:29 PM Revision 3355e574 (cdmlib): cleanup
- 06:29 PM Revision 523a6c95 (cdmlib): fix #5095 unignore tests (remaining 2 tests in AssemblerTest are caused by changes in #6324)
- 06:26 PM Revision 0b5641a3 (cdmlib): ref #5095 avoid running dozer tests when dozer.sourceforge.net is not available
- 06:22 PM Revision ffc8547f (cdmlib): fixing incorrect test
- 06:21 PM Revision da9e578e (cdmlib): cleanup
- 05:56 PM Revision ad89c499 (cdmlib): ref #5095 change dozer mapping from .dtd to .xsd
- 05:30 PM Revision a2bbcf8a (cdmlib): cleanup
- 05:28 PM Revision 9e63c4cf (taxeditor): ref #9448: cleanup io package - continue
- 05:16 PM Revision b172c7ce (taxeditor): translate specimen correctly
- 05:08 PM Revision 87baedee (taxeditor): ref #9448: cleanup io package
- 04:53 PM Revision ac58825c (cdmlib): ref #9114 fix dozer mapping by reverting URI mappings to java.net.URI
- 04:51 PM Revision fc70bf22 (cdmlib): cleanup
- 04:24 PM Revision ca097629 (taxeditor): do not refresh navigator if it is not needed - continue
- 02:59 PM bug #9247 (Duplicate): Link with taxon does not work correctly
- this is an exact duplicate of #9264 (even the same description text)
- 02:22 PM bug #9247 (Worksforme): Link with taxon does not work correctly
- This works now. Also if synonyms are selected.
- 01:43 PM bug #8767 (Feedback): Workflow support for publish flag
- Katja Luther wrote:
> I also adapted the changeSynonymToAcceptedTaxon, the newly created taxon has the same publish ... - 09:10 AM bug #8767 (Resolved): Workflow support for publish flag
- 08:47 AM bug #8767: Workflow support for publish flag
- This is fixed, also for pp synonyms.
I also adapted the changeSynonymToAcceptedTaxon, the newly created taxon has ... - 12:31 PM bug #8824 (Worksforme): No dirty flag when adding new factual data set
- Seems to be fixed in the meanwhile.
- 11:58 AM Revision 1eeaa942 (taxeditor): do not refresh navigator if it is not needed - continue
- 11:29 AM Revision 12cdcf1f (taxeditor): do not refresh navigator if it is not needed
- 11:09 AM Revision 66c95313 (taxeditor): do not refresh navigator when node wizard was canceled
- 10:54 AM Revision a5c094d3 (taxeditor): fix #9427: code cleaning
- 10:54 AM feature request #9427: Code cleaning in CdmPreferenceCache
- Please have a look.
- 10:53 AM feature request #9427 (Resolved): Code cleaning in CdmPreferenceCache
- Applied in changeset commit:taxeditor|a5c094d3aeed06649e96b33d5779d86c3e92b5a3.
- 10:47 AM Revision 61cc290b (taxeditor): save should not open navigator subtree if linkWithTaxon is disabled
- 10:12 AM Revision 1f7f3f09 (cdmlib): missed to add the new enum
- 09:58 AM Revision 8b233e12 (cdmlib): revert setting publish in clone
- 09:39 AM Revision 0f6a011b (cdmlib): add tests for different sec handling
- 09:31 AM bug #8653: NullPointerException (NPE) when focusing Taxon Name Editor
- I moved it to 5.11
- 08:55 AM bug #8653: NullPointerException (NPE) when focusing Taxon Name Editor
- this ticket should still be in Release 5.11 but this MS has been closed, so it will be without until closed
Review i... - 09:10 AM Revision db73ee9a (cdmlib): publish also should be cloned in TaxonBase.clone
- 09:03 AM bug #9426 (Resolved): Set publish flag for Synonyms in accordance with accepted taxon publish flag
- please review
- 08:32 AM Revision 2005ad49 (taxeditor): adapt changeSynonymToAcceptedTaxonOperation to new method parameters
- 08:28 AM Revision 037a20f8 (cdmlib): fix publish handling for synonyms and misapplied names and add sec handling for switch syn to accepted
02/03/2021
- 04:48 PM feature request #8611: [DISCUSS] how to handle editor teams
- This is a model issue therefore I did change category and target version.
- 03:44 PM bug #9386: orthographic variants should not be symmetrical
- AM:
nein, nur die bisherige Beziehung umdeuten ist natürlich nicht geplant.
Eher sollte es so aussehen:
• Es... - 03:39 PM bug #9386: orthographic variants should not be symmetrical
- WGB:
ich bin nur nicht damit einverstanden, dass man das existierende Label einfach asymmetrisch macht. Das klang ... - 01:13 PM task #9451 (Resolved): Cache strategy for classifications is missing
- Applied in changeset commit:cdmlib|1d67f2ce2878bb557d58827fa3d7f4047715c54c.
- 01:12 PM task #9451 (Closed): Cache strategy for classifications is missing
- Currently generateTitle() is implemented within the Classification class itself.
- 01:13 PM Revision 1d67f2ce (cdmlib): fix #9451 add ClassificationDefaultCacheStrategy
- 01:10 PM Revision 05f06f64 (cdmlib): ref #9443, ref #5575 tissue sample as DnaSample generation and initialization of DNA sample cache strategies
- 01:02 PM Revision 493cdee0 (cdmlib): ref #5575 refactor initialization of cache strategy (initialize when needed, not in constructor)
- 10:54 AM Revision 48b8ebbb (cdmlib): cleanup
- 10:36 AM Revision 35a741a0 (taxeditor): minor update variable name -continue
- 10:09 AM bug #9450: Save reverts previous changes in NameEditor
- Could not reproduce this problem.
I tried it started the editor out of my workspace but could not reproduce this is... - 09:54 AM bug #9450 (New): Save reverts previous changes in NameEditor
- mail WGB:
Hallo, wir haben bei Polygala leptocuaulis erst die Secundum Referenz des Taxon geändert, dann den Autor... - 10:01 AM Revision 025f40a8 (taxeditor): minor update variable name
- 08:45 AM Revision f349859b (taxeditor): avoid NPE
- 08:40 AM bug #7633: MySQLIntegrityConstraintViolationException - Duplicate entry during fact editing
- same exception for changing err. sec and sensu (sec.) reference:
~~~ text
last remote method : http://api.cyber... - 07:59 AM feature request #6016 (Rejected): ICN rules in cdm validation framework implemented
- rejecting this ticket since #6015 has also been rejected, see comments there
- 07:37 AM bug #9449 (New): Classes handling Dtos should not enherit from ICdmEntitySessionEnabled
- mail AM:
beim Ticketreview bin ich gerade darauf gestoßen, dass ICdmEntitySessionEnabled die Methode
public Co... - 07:33 AM task #9448 (In Progress): Remove all not e4 classes and rename "Remoting..." classes
- For a lot of classes there are e4 and not e4 versions, the not e4 versions are not needed anymore therefore we can re...
- 12:36 AM Revision af086d52 (cdmlib): cleanup
02/02/2021
- 10:40 PM Revision 828441bf (cdmlib): cleanup
- 06:50 PM feature request #9447 (New): Allow editing derivation events with multiple originals in specimen tree editor
- Currently the specimen tree editor only allows derivation hierarchies with derivation events having only 1 "original"...
- 06:27 PM feature request #9446 (New): Define possible derivation paths in SpecimenOrObservationType
- Even in theory, not all specimenOrObservation types can be derived from all specimenOrObservation types.
We may wa... - 06:06 PM task #9445 (New): [DISCUSS] Should GatheringEvent have descriptive data
- Currently descriptive data on the gathering site such as ecology data, site images or water quality parameters for wa...
- 05:54 PM feature request #9444 (New): Allow showing, editing and reusing GatheringEvent in specimen tree editor
- Currently the highes level of units in the derivative tree editor is the field unit. However, in the model and in rea...
- 04:12 PM Revision 7a03ad62 (taxeditor): ref #9443 broaden the usecases when dnasample can be added to field or derived unit
- 04:11 PM Revision b350a37e (taxeditor): cleanup
- 03:29 PM Revision aaf285ef (taxeditor): ref #9443 broaden the usecases when media can be added to field or derived unit
- 03:15 PM Revision bf23ce59 (taxeditor): ref #9443 fix tissue sample handling in DerivateLabelProvider
- 03:15 PM Revision ee4252e0 (taxeditor): ref #9443 fix tissue sample handling in SampleDesignationDetailElement
- 03:14 PM Revision 57cb15dd (taxeditor): cleanup
- 02:50 PM bug #9443 (In Progress): Improve handling of TissueSamples and others in SpecimenTreeEditor
- The saving as Derived unit has been implemented in 5.19 already (a3b7c1e7f7b79) so it is now high priority to also re...
- 02:48 PM bug #9443 (Closed): Improve handling of TissueSamples and others in SpecimenTreeEditor
- Tissue Samples are handled stored as DnaSample in specimen tree editor which is not correct as they never can have an...
- 02:26 PM feature request #9442 (New): Show warning for non conformant letter case in scientific names
- Rule:
First letter in a mononomial starts with a capital letter
Exceptions: none
First letter of an epithet sta... - 01:26 PM Revision 298f5d6d (taxeditor): cleanup
- 01:26 PM Revision 381249d5 (taxeditor): fix CCE for TissueSample in TissueSampleGeneralDetailElement
- 01:26 PM Revision a37746cc (taxeditor): cleanup
- 11:02 AM Revision 96983561 (cdmlib): remove System.exit(-1) from CdmPersistentDataSource
- 11:01 AM Revision 095aad96 (cdmlib): cleanup
- 10:23 AM bug #9386: orthographic variants should not be symmetrical
- So I think we can summerize that we agree that according to the code orthographic variants are a cluster of "names" w...
02/01/2021
- 10:46 PM feature request #9272 (Closed): Add missing nomenclatural status
- The above terms were added. A new framework for handling the status/nomenclatural standing was added in #9282. Some i...
- 10:22 PM feature request #5794 (Closed): Move other invalid names to the end
- Open issues moved to new tickets.
- 10:20 PM feature request #5794: Move other invalid names to the end
- missing handling of invalid designation name relationships moved to #9441
- 10:13 PM feature request #5794: Move other invalid names to the end
- missing invalid designation sign (dash) in data portal moved to #9440
- 08:05 PM feature request #5794: Move other invalid names to the end
- AM:
derzeit versuchen wir (also v.a. Walter und ich) die nomenklatorischen Status und v.a. die Namen, die lediglic... - 10:19 PM bug #9441 (Closed): Move names with invalid designation name relationships to the end in taxon comparator
- copied from #5794 and #9272
Names with relationship
* is later isonym of
* is later citation of
are not ye... - 09:42 PM bug #9440 (New): Invalid designation sign missing for some invalid designations in data portal
- The following status are missing the invalid designation symbol (dash)
* op. utique oppr.
* pro syn.
* nom. rej.... - 05:43 PM bug #9245: Creating derived units from existing derived unit is not possible in specimen tree editor
- Andreas Müller wrote:
> This to me seems to be fixed. Katja can you check, and if true add commit and correct target... - 04:06 PM feature request #7345 (Closed): [E+M] Common name references selectable in TaxEditor
- I think this works and can be closed.
- 04:05 PM feature request #7440 (Closed): E+M mark common name reference with according marker
- I checked the final import result and it looks ok.
~~~
SELECT r.id, r.uuid, r.titleCache, m.flag, mt.titleCache,... - 03:44 PM bug #7849 (Closed): Improve DB Preferences handling and saving in TaxEditor
- 03:43 PM feature request #7902 (Closed): Allow default values for PreferencePredicates
- As open issues are handled in separate tickets now, we can close this one.
- 03:42 PM feature request #7902: Allow default values for PreferencePredicates
- Andreas Müller wrote:
> For boolean and/or UUIDs /UUID Lists and maybe others we may think about separate enums to e... - 03:42 PM feature request #7902: Allow default values for PreferencePredicates
- Andreas Müller wrote:
> Generally implemented but for existing predicates we still need to define default values.
... - 03:37 PM feature request #9439 (New): Split PreferencePredicates depending on their type
- copied from #7902
"For boolean and/or UUIDs /UUID Lists and maybe others we may think about separate enums to expl... - 03:09 PM feature request #6016: ICN rules in cdm validation framework implemented
- To me it is very unclear if we will ever work on this ticket. So for there is only one rule in a sub-issue of yet in ...
- 02:45 PM feature request #6016: ICN rules in cdm validation framework implemented
- Can you add some more information on what is required here?
And also we should set assignee, category and target ver... - 02:37 PM feature request #6238 (Closed): add name of sec reference to display of concept relations in portal and a little header
- I think we can close this ticket. If there is still an open issue, please reopen a new ticket.
- 02:35 PM feature request #6043: Name export for JACQ
- Is this still required? If yes, can we add a milestone? Can we close otherwise?
- 10:53 AM bug #9290 (Resolved): stop setting Registration.citation as citation for TypeDesignations in all type editors by default
- this ticket is fully solved now, please review
- 10:51 AM feature request #9324 (Resolved): Enable designation reference editing in name type designation
- allowing null selection for type status in name type designation editor implemented.
so this ticket can be reviewed - 10:39 AM feature request #9324: Enable designation reference editing in name type designation
- **7: no idea if we need the editon of references here (I would say: no).**
editing of references is enabled be def... - 10:50 AM Revision 10f4a16e (cdm-vaadin): ref #9324 allowing null selection for type status in name type designation editor
- 10:34 AM feature request #9301 (Resolved): SpecimenTypeDesignationEditor: Add fields for citation and citationDetail
- can be reviewed
- 10:33 AM feature request #9325 (Duplicate): Enable section in specimen type designation
- closing as duplicate of #9301
- 10:22 AM Revision f756340a (cdm-vaadin): ref #9290 limiting available designation status types for nom acts without a name - NameTypeDesignationEditor & improving previous code
- 09:52 AM bug #7529: Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
- I seem to remember that I created this ticket in turn to an email conversation that the both of us had.
However, I d... - 09:36 AM bug #7529: Wrong UUID after creating a GrantedAuthority for a Role like ROLE_PUBLISH
- AK, do you still remember the context for this ticket. What did not work, what did you test, which DB was involved?
- 09:22 AM bug #9390 (In Progress): Remaining issues for set secundum dialog
- the space between the checkbox area and the text is reduced, the line break in the description part I was not able to...
- 09:07 AM Revision f85472ea (taxeditor): ref #9390: reduce the space between checkboxes and text
- 08:15 AM Revision cb9686b7 (taxeditor): ref #9483: check publish flag permission for subtree operation
- 08:12 AM Revision 92745e3b (taxeditor): ref #9483: check publish flag permission for synonyms
- 08:05 AM bug #9438 (New): User without rights on publish flag can update publish flag of synonyms and subtree operations
- In the details view of a taxon the publish flag is disabled for users with unsufficent rights but in the details view...
- 07:18 AM feature request #9437 (New): Show user friendly text for permission denied exception
- If a user has not sufficient rights a permission denied exception is thrwon, this needs to be catched and a user frie...
- 07:13 AM bug #6273 (Duplicate): Drag&Drop a classification on the rights editing form throws NPE
- 07:10 AM feature request #9436 (New): Save dialog should have three options
- The Dialog inidcating saving is necessary should have three options:
1. Continue with saving
2. Continue without ... - 07:02 AM bug #9435 (New): Error when deleting without saving
- mail WGB:
Hallo,
beim Löschen ist u.a. Fehler aufgetreten (ich hatte nicht vorher gespeichert, das funktionierte ...
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