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From 12/01/2020 to 12/30/2020

12/22/2020

09:09 PM bug #9365 (Closed): Reuse taxon does not work in new Taxon dialogue
partly copied from #5114.
If reuse taxon is selected still a new taxon is created.
Also the secundum field shou...
Andreas Müller
08:52 PM feature request #4896 (Closed): Bulkeditor: deduplication of objects of different type
Generally this works. Open issue is handled in #9361 Andreas Müller
08:37 PM task #9364 (In Progress): Cleanup authors with multiple & and protected names and teams
Andreas Müller
07:29 PM task #9364: Cleanup authors with multiple & and protected names and teams
Protected Teams(nomenclaturalTitle):
AlgaTerra: >14000
Cichorieae: 8487
Cuba: 14
Campanula: 1171
Caryo_amarant...
Andreas Müller
03:56 PM task #9364: Cleanup authors with multiple & and protected names and teams
Protected Names (still without fulltitlecache and authorshipcache):
Bromeliaceae: 584
Cichorieae: 476
Cuba: 567
...
Andreas Müller
03:17 PM task #9364 (Closed): Cleanup authors with multiple & and protected names and teams
(high priority only to first issue as it is related to #2200)
In context of #2200 I already checked names with >1 ...
Andreas Müller
08:16 PM feature request #2200 (Closed): Handle multiple authors for names correctly when caching
This can be closed as it works now as expected. Open data issues are handled in #9364
The only directly related is...
Andreas Müller
10:51 AM Revision dc310f85 (cdmlib): ref #4770, ref #4908, ref #5163 remove commented line as it seems to work now
Andreas Müller
10:10 AM Revision f8fa7762 (cdmlib): ref #4770, ref #4908, ref #5163 try to remove explicit setting of protected nomecncl. title in convertPerson2Team
Andreas Müller
09:59 AM bug #5163 (Closed): Converting persons to team members may result in "-empty team-"
The "empty team" issue has been solved. The handling of team members has been moved to follow up ticket #9363 as it i... Andreas Müller
09:56 AM feature request #9363 (New): Allow to parse the new team when converting person to team
copied from #5163
When converting a person to a team does not get team members by default. We could add a configur...
Andreas Müller
09:48 AM Revision 6057b354 (cdmlib): ref #4770, ref #4908, ref #5163 some finetuning on convertPerson2Team
Andreas Müller
12:14 AM bug #2578 (Closed): Improve "move synonym"
Now we always move the full homotypical group to the other taxon, so this is fixed.
The check that the synonym is ...
Andreas Müller
12:07 AM Revision 304fcfc8 (cdmlib): ref #4770, ref #4908, ref #5163 assert that team has protected nomenclatural title after convertPerson2Team
Andreas Müller

12/21/2020

11:39 PM bug #9362 (New): Convert Team to Person and vice versa saves immediately
When converting a team to a person or converting a person to a team the operation is immediately executed and not wai... Andreas Müller
11:32 PM feature request #4908 (Closed): adding convert Team to Person and Person to Team to the bulk editor
Open issues fixed or moved to new ticket. Andreas Müller
11:32 PM Revision b07820f4 (taxeditor): ref #4908 adapt error message for MergeException
Andreas Müller
11:31 PM Revision 01f597fe (cdmlib): ref #4770, ref #4908 add test for person is null in person2Team converter
Andreas Müller
11:27 PM feature request #9361 (New): Give more specific information why person can not be converted to team
copied from #4908 and #4896 (says that current implementation is only a workaround as a suitable return type for isMe... Andreas Müller
11:09 PM Revision 58a9c0ab (cdmlib): ref #4770, ref #4908 handle person is null in person2Team converter
Andreas Müller
10:46 PM feature request #4770 (Closed): Allow convert person to team
the open issue is fixed now. We can close the ticket Andreas Müller
10:45 PM Revision d7943997 (cdmlib): ref #4770 handle unprotected titlecache for person2Team converter and some finetuning for empty persons
Andreas Müller
10:39 PM Revision a7cbfd9c (cdmlib): ref #4770 fix clone for AgentBase.contact
Andreas Müller
10:38 PM Revision f3a14906 (cdmlib): cleanup
Andreas Müller
03:15 PM Revision 2e9c058b (cdmlib): cleanup
Andreas Müller
03:14 PM Revision 2b772077 (cdmlib): ref #4770 fix handling nomenclatural title for convertPerson2Team
Andreas Müller
03:00 PM Revision 94722700 (cdmlib): improve generics for save() method
Andreas Müller
02:59 PM Revision c9b75310 (cdmlib): cleanup
Andreas Müller
01:44 PM Revision 180577bd (taxeditor): ref #4908 adapt German menu label
Andreas Müller
01:36 PM feature request #4769 (Closed): Allow convert team to person
I used this intensively for deduplicating authors in cyprus DB and problems never occured. So I guess we can close th... Andreas Müller
01:26 PM bug #9360 (Feedback): Parsed hybrids can not be persisted
In Flora of Cyprus I tried to persist a hybrid formula (Aegilops biuncialis × geniculata) but got an NPE in TaxonName... Andreas Müller

12/18/2020

11:38 PM feature request #7894 (Closed): [CHECK] Import sourceNumber as Identifier for references
As ERS did not complain about missing numbers during the last 1.5 years I guess everything went well. Andreas Müller
11:37 PM feature request #7800 (Closed): Parse preliminary RefDetails
As the import did run and most of the above RefDetails were parsed I think we can close this ticket. However, there a... Andreas Müller
11:18 PM feature request #9204 (Closed): Update cdmlib and taxeditor dependencies
I close this ticket as related to v5.18 and open a new one for the remaining (and new) issues Andreas Müller
11:17 PM task #9359 (Closed): Update cdmlib, taxeditor, cdmserver etc. dependencies
A lot of version updates and updates to how dependencies are handled in TaxEditor has been done already in #9204.
...
Andreas Müller
11:13 PM task #9208 (Closed): Move cdmlib-print and cdmib-remote to taxeditor.printpublisher
I think we can close this ticket.
There is a very important follow up ticket #9351 (assigned to AK) that needs to ...
Andreas Müller
11:04 PM bug #9354 (Feedback): Sorting in distribution editor is broken
There are still open issues as the comparator does not follow the comparator contract and handling of names with rank... Andreas Müller
10:55 PM feature request #6076: Specimen biocase search should work on observations
What needs to be done to close this ticket?
Is it for review? If yes, how to review? Which search did not work? In T...
Andreas Müller
10:44 PM feature request #7262 (Closed): add progress monitor to csv print export and cdm light export
Looks like this is fixed (I did not check for CSV export as it is not so relevant anymore) Andreas Müller
10:34 PM bug #7013 (Closed): NonUniqueObjectException for setSecundumReferenceForSubtree
As far as I know and have tried this works now. Also the progress monitor seems to work again. Therefore I close the ... Andreas Müller
10:33 PM Revision 2f7a80f7 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree - try to fix compile errors
Andreas Müller
10:26 PM Revision 863c4112 (taxeditor): ref #9349 adapt TaxEditor to method move for cloneSubtree
Andreas Müller
10:25 PM Revision 14ac3831 (taxeditor): cleanup
Andreas Müller
10:06 PM bug #7098 (Closed): reuse name does not work
The method has been fully refactored in the meanwhile so I guess the above question is not relevant anymore. Closing ... Andreas Müller
09:57 PM Revision cd0bfb6e (cdmlib): try to fix failing test in suite (cont.)
Andreas Müller
09:32 PM Revision 5c696121 (cdmlib): ref #9349 add doRecursive to subtreeCloning
Andreas Müller
09:29 PM Revision 71f6ac57 (cdmlib): cleanup
Andreas Müller
09:29 PM Revision d1198615 (cdmlib): try to fix failing test in suite (cont.)
Andreas Müller
08:51 PM Revision 34140e24 (cdmlib): ref #9349 rename newClassificationName method (cont.)
Andreas Müller
08:48 PM Revision 1b873fea (cdmlib): try to fix failing test in suite
Andreas Müller
08:47 PM Revision 0120e292 (cdmlib): ref #9349 rename newClassificationName method
Andreas Müller
08:47 PM Revision 60617880 (cdmlib): cleanup
Andreas Müller
08:37 PM Revision 2da76eb1 (cdmlib): ref #9349 fix test for nomenclaturalStatus in name cloning
Andreas Müller
08:20 PM Revision e9612b75 (cdmlib): ref #9349 deprecate setReuseNames(false)
Andreas Müller
08:19 PM Revision c5bb8419 (cdmlib): ref #9349 move cloneSubtree to taxonNodeService
Andreas Müller
08:18 PM Revision 77c5bf22 (cdmlib): remove deprecated methods from classificationService
Andreas Müller
08:17 PM Revision 6077af92 (cdmlib): cleanup
Andreas Müller
07:41 PM feature request #4867 (Feedback): Add menu item for subtree cloning
It seems that the menu entry was removed or does not work anymore, even with experimental features being switched on.... Andreas Müller
07:25 PM task #9228: Adaptations to allow editing Centaurea in Flora of Greece
After running the import it became clear that not reusing names is not a good idea as
* handling name relationship...
Andreas Müller
07:03 PM Revision dcd42a41 (cdmlib): ref #9349 improve name cloning (including documentation as name cloning is not straight forward)
Andreas Müller
05:52 PM bug #9358: OptionalDataException during HTTP invoker call
If it is true that this problem occurs client side we should catch the exception in a way that it becomes clear that ... Andreas Müller
04:28 PM bug #9358: OptionalDataException during HTTP invoker call
Same issue but slightly different stacktrace
~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/rem...
Andreas Müller
04:27 PM bug #9358: OptionalDataException during HTTP invoker call
ERS: Das könnte sein. Ich habe auf meinem Rechner zuhause manchmal tatsächlich Kapazitätsprobleme - Ich werde das mal... Andreas Müller
04:20 PM bug #9358: OptionalDataException during HTTP invoker call
Lazy initializing distributions.
~~~
at org.hibernate.proxy.pojo.javassist.JavassistLazyInitializ...
Andreas Müller
04:11 PM bug #9358: OptionalDataException during HTTP invoker call
~~~
last remote method : http://api.cybertaxonomy.org:80/euromed/remoting/common.service
last remote request client...
Andreas Müller
04:11 PM bug #9358 (New): OptionalDataException during HTTP invoker call
Note: first issue to solve is catching the exception client side as explained in comment 6 => #9629
The bug in com...
Andreas Müller
12:02 PM Revision 239cf764 (cdmlib): cleanup
Andreas Müller
12:01 PM Revision 1b50bc76 (cdmlib): move model comparators to own package
Andreas Müller
11:25 AM bug #9142: The Agent search dialog shows duplicated entries
Andreas Müller wrote:
> Thats what I thought. It is actually not really a wrong implementation of the method but due...
Katja Luther
11:14 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
Thats what I thought. It is actually not really a wrong implementation of the method but due to the above described s... Andreas Müller
10:54 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
First I thought it was because the search method was called twice but the real cause was the wrong implementation of ... Katja Luther
11:24 AM Revision 84e04ed3 (cdmlib): ref #9142: use clazz for FROM statement in getUuidAndAbbrevTitleCache for agents
Katja Luther
11:11 AM bug #9264: Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
please review Katja Luther
10:59 AM bug #9264 (Resolved): Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
Applied in changeset commit:taxeditor|d3334540d33466758ed37e2c7648f74f99420f43. Katja Luther
10:50 AM Revision f0cf9026 (cdmlib): ref #9142: fix getUuidAndAbbrevTitleCache for agents
Katja Luther
10:18 AM Revision d3334540 (taxeditor): fix #9264: use eventbus for updating link with taxon
Katja Luther

12/17/2020

08:11 PM Revision b7f8c9d4 (taxeditor): Merge branch 'hotfix/5.18.2'
jenkins
07:53 PM Revision 34753cbb (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
(cherry picked from commit e8d037bd184f407b89f09df7d93155119480d7b1) Andreas Müller
07:52 PM Revision 840605a4 (taxeditor): fix NPE for cloned lectotype typedesignations
(cherry picked from commit 11c7cb1711a7ed2dc828b81318fcaf34e34a3ef9) Katja Luther
07:14 PM Revision 45c8cb20 (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.2 and cdmlib version : 5.18.0
jenkins
04:08 PM Revision e8d037bd (taxeditor): remove cdmlib-remote-webapp.war from git in hotfix branch
Andreas Müller
03:50 PM Revision 5b06a013 (taxeditor): Merge branch 'hotfix/5.18.1'
root
03:40 PM Revision 7bc7988e (taxeditor): remove cdmlib-remote-webapp.war from git
Andreas Müller
11:49 AM bug #9142 (Feedback): The Agent search dialog shows duplicated entries
Andreas Müller
11:39 AM bug #9142: The Agent search dialog shows duplicated entries
can you shortly explain what the problem was and why the commit fixes it? Andreas Müller
11:36 AM bug #9142: The Agent search dialog shows duplicated entries
Applied in changeset commit:taxeditor|359b77dda6efc328563cfd93e63aee841662b4e7. Katja Luther
11:30 AM bug #9142 (Resolved): The Agent search dialog shows duplicated entries
This should be fixed. Please review. Katja Luther
11:35 AM Revision 359b77dd (taxeditor): fix #9142: fix doubled entries in agent selection dialog
Katja Luther
10:35 AM Revision 59066f6b (taxeditor): adapt SpringSource GA Repository to https
Andreas Müller
10:34 AM feature request #9337: Open issues for reimplementation of termtree editors
16. Add "Open in Vocabulary" to term tree editor context menu; this is generally needed the primary usecase is to all... Katja Luther
09:16 AM feature request #9337 (In Progress): Open issues for reimplementation of termtree editors
Katja Luther
10:10 AM feature request #8289 (Resolved): Add "Open in RefObj view" to term editor context menu
please review. Katja Luther
10:09 AM Revision dc2e648b (taxeditor): ref #8289: add open in to term editor context menu
Katja Luther
09:13 AM bug #9344: Datasets in Descriptive Dataset Navigator should be ordered
please review Katja Luther
09:13 AM bug #9344 (Resolved): Datasets in Descriptive Dataset Navigator should be ordered
Applied in changeset commit:taxeditor|b5f32b5d274ff26e8bf15ed9f42c61f028e79584. Katja Luther
09:13 AM Revision b5f32b5d (taxeditor): fix #9344: add comparator to descriptive dataset navigator
Katja Luther
08:48 AM bug #9353 (Resolved): Copy & Paste creates dirty data in term trees
Applied in changeset commit:taxeditor|27ca515332a1068e6f49ccff9a4466bce556a548. Katja Luther
08:48 AM Revision 27ca5153 (taxeditor): fix #9353: fix c&p in term trees
Katja Luther

12/16/2020

04:29 PM Revision 9c9bb6b3 (taxeditor): remove doubled is
Katja Luther
04:17 PM Revision 63fd9baa (taxeditor): rename labels for DDS navigator
Katja Luther
04:13 PM Revision c34d4827 (taxeditor): open in of nomencl.source for the sourced name
Katja Luther
03:16 PM Revision 25cc3cf4 (taxeditor): adapt DescriptionHelper for refObjects description of nomclat. sources
Katja Luther
03:02 PM Revision b63ed015 (taxeditor): fix NPE for cloned lectotype typedesignations
Katja Luther
03:01 PM Revision 11c7cb17 (taxeditor): fix NPE for cloned lectotype typedesignations
Katja Luther
09:46 AM Revision 4e3c1b39 (taxeditor): remove error message for MAN without sec
Katja Luther
09:44 AM Revision cca35f36 (taxeditor): do not expand the server side preferences
Katja Luther

12/15/2020

12:43 PM Revision ea6ec182 (taxeditor): ref #9337: remove obsolete part descriptions
Katja Luther
12:40 PM Revision f6ba2ccb (taxeditor): ref 9337: rename all termtree related classes
Katja Luther
11:36 AM feature request #9338 (Resolved): Restructure term menus
Both menues have the same structure and also the handling of opening the editors are synchronized. Katja Luther
11:33 AM Revision 22ac94a9 (taxeditor): ref #9338: restructure term menues and adapt handling
Katja Luther

12/14/2020

10:44 AM Revision 38018d82 (cdmlib): fix import of dna data with different provider software version
Katja Luther

12/11/2020

11:13 AM Revision 2cb343b3 (taxeditor): adapt path to cdmlib-remote-webapp.war from webapp to local
Andreas Müller
10:57 AM Revision 849c20bf (taxeditor): fix cdmlib-print and cdmlib-remote for hotfix 5.18.1
Andreas Müller
10:02 AM Revision 56cf64f7 (taxeditor): ref #9356: hotfix solution
Katja Luther
09:48 AM Revision 40d48f6f (taxeditor): ref #9356: hotfix solution
Katja Luther
08:20 AM bug #9357 (New): Advanced search shows selection for all classification even if only 1 classification is available for a dataportal
In the flora of Greece dataportaal only the classification "Vascualar plants of Greece" should be shown
![](pictur...
Andreas Müller

12/10/2020

10:41 PM Revision 51b088c1 (cdmlib-apps): minor
Andreas Müller
10:41 PM Revision b8ddc6c3 (cdmlib-apps): update cdmlib-app to v5.19.0
Andreas Müller
03:29 PM bug #9356 (In Progress): Comparison method violates its general contract for SourceComparator and TypeDesignationComparator
Andreas Müller
02:02 PM bug #9356 (Closed): Comparison method violates its general contract for SourceComparator and TypeDesignationComparator
There are two comparators violating the contract: SourceComparator in taxeditor and typeDesignationComparator in cdml... Katja Luther
01:26 PM bug #9350 (Resolved): Create new taxonnode ignores the publish flag
yes, this is resolved and the workaround removed. Katja Luther
12:51 PM bug #9350 (In Progress): Create new taxonnode ignores the publish flag
is this resolved and open for review (the develop version)? Andreas Müller
01:21 PM Revision eb3f9882 (taxeditor): ref #9350: fix is implemented in cdmlib therefore we can remove the workaround in taxeditor
Katja Luther
12:59 PM bug #9355 (New): Selection dialog for secundum reference does not work correctly
mail NK:
ich kann keine neue sec. Referenz mehr auswählen, ohne vorher die bereits vorhandene zu löschen. Ich bin ...
Katja Luther
11:32 AM Revision a3d9156f (taxeditor): cleanup
Andreas Müller
11:28 AM Revision 9360e6f2 (taxeditor): cleanup
Andreas Müller

12/09/2020

04:06 PM bug #9354 (Resolved): Sorting in distribution editor is broken
fixed for hotfix 5.18.1 Katja Luther
04:05 PM bug #9354 (Closed): Sorting in distribution editor is broken
The comparator for sorting the taxa in distribution editor does not work correctly. Katja Luther
04:04 PM bug #9353 (Closed): Copy & Paste creates dirty data in term trees
It was missed to implement copy & paste for the dto implementation of the term tree editors, the menu items are still... Katja Luther
10:24 AM Revision 6b6ae919 (taxeditor): fix distribution editor comparator
Katja Luther
10:02 AM Revision f34ce847 (taxeditor): fix distribution editor comparator
Katja Luther

12/08/2020

01:51 PM bug #9352 (New): Missing order in quantitative data wizard
mail AM:
bei Eingabe von QantData scheint mir die Reihenfolge der Felder etwas beliebig. Kann man das evtl. fest v...
Katja Luther
12:55 PM feature request #9002: Find suitable symbols for excluded, unplaced, placement doubtful
WGB:
die Lösung für dieses Ticket hängt von der breiteren Diskussion dieser Kategorien und ihrer Verbindung mit de...
Andreas Müller
12:52 PM bug #8971: Long running tasks in taxon navigator should disable the navigator
WGB:
hier nur nochmal die Bestätigung, dass das ein an verschiedenen Stellen auftretendes Problem ist, besonders, ...
Andreas Müller
10:56 AM Revision 3c793992 (taxeditor): ref #9199: fix missing handling of name in source in nomenclatural source
Katja Luther
10:52 AM Revision af6adc60 (taxeditor): ref #9199: fix missing handling of name in source in nomenclatural source
Katja Luther
08:37 AM bug #9351 (Closed): Include new locations for cdmlib-print and cdmlib-remote in jenkins release script
cdmlib-print and cdmlib-remote are now only available in taxeditor.printpublisher.
Therefore the according links t...
Andreas Müller

12/07/2020

11:16 PM Revision 12490f6a (taxeditor): cleanup
Andreas Müller
11:16 PM Revision e62fc33a (taxeditor): remove cdmlib-remote from local (to test if it is needed at all there)
Andreas Müller
11:16 PM Revision b67648cb (taxeditor): upgrade cdmlib-print and cdmlib-remote to 5.19-Snapshot in printpublisher
Andreas Müller
11:16 PM Revision b4221bf3 (taxeditor): again add remote-webapp-war to gitignore
Andreas Müller
12:15 PM bug #9350: Create new taxonnode ignores the publish flag
implemented a workaround for hotfix 5.18.1 in editor, this should be removed for the next release. The correct fix co... Katja Luther
12:12 PM bug #9350 (Closed): Create new taxonnode ignores the publish flag
Creating a new taxon node and do not set the publish flag is not taken for the newly created taxon. Katja Luther
12:09 PM Revision d4de1459 (taxeditor): workaround for missing publish flag in newTaxonNode
Katja Luther
12:06 PM Revision a3509fe0 (taxeditor): workaround for missing publish flag in newTaxonNode
Katja Luther
11:55 AM Revision ac6fd8fc (cdmlib): fix missing publish flag in createTaxonnode
Katja Luther

12/05/2020

01:43 PM bug #6488 (Closed): Always show some label text in the specimen editor even when no information is available
This seems to be fixed as it did not appear anymore. Open new ticket if something similar happens again. Andreas Müller
01:42 PM bug #4330: Correct handling of nomenclatural inreferences of Journals
not yet fixed therefore I move it to current milestone Andreas Müller
01:39 PM bug #1924: CIHORIEAE in-references in Footnotes
This is still open therefore I move it to current milestone Andreas Müller
01:38 PM bug #2969: Correct formatting for bibliographic references
This is not yet fixed therefore I move it to current milestone. Andreas Müller
01:27 PM feature request #7334 (Closed): Make pro parte and partial synonyms real concept relationships
This is in use now for longer time and no errors were reported, so I guess we can close it. Andreas Müller
01:22 PM feature request #5396: User interface to create a Remote Source
moving all open remoting 6.0 tickets to Unassigned Andreas Müller
01:21 PM feature request #5366: Implement less strict check for compatibility between taxeditor and target cdmserver
moving all open remoting 6.0 tickets to Unassigned Andreas Müller
01:20 PM feature request #5356: Handle exceptions which require reconnect
moving this open remoting 6.0 ticket to current milestone to decide what to do with it.
Is the above mentioned sol...
Andreas Müller
01:18 PM feature request #5020: [MASTER] Refactor / Redesign
moving this open remoting 6.0 ticket to current milestone as we have to decide what to do with it (to me it is unclear) Andreas Müller
01:16 PM feature request #4931: [Master] Fix Performance Issues
moving this open remoting 6.0 tickets to Reviewed Next Major Release as subtickets are also there Andreas Müller
01:11 PM feature request #4930: Implement Tests for Bulk Editor
moving all open remoting 6.0 tickets to Unassigned Andreas Müller
01:11 PM feature request #4929: Implement Tests for Polytomous Key Node Editor
moving all open remoting 6.0 tickets to Unassigned Andreas Müller
01:10 PM feature request #4074: [MASTER] Setup testing framework for remoting
moving all open remoting 6.0 tickets to Unassigned Andreas Müller
01:09 PM feature request #4021: H2 running in Server mode
moving all open remoting 6.0 tickets to Unassigned Andreas Müller
12:57 PM feature request #5794 (Resolved): Move other invalid names to the end
Needs to be checked against new implementations within #9272 and #9282 , does comparator work accordingly. Also add d... Andreas Müller
12:51 PM bug #9311 (Closed): Update some (abbrev) labels for nomenclatural status types
Andreas Müller
11:13 AM Revision d4511e7d (cdmlib): cleanup
Andreas Müller
11:13 AM Revision 1d8d7a2f (cdmlib): remmove potential NPE in TermNode.toString
Andreas Müller
10:55 AM Revision 5fc450f7 (cdmlib): cleanup
Andreas Müller
09:37 AM Revision e819af3f (cdmlib-apps): Update BgbmInstancesUpdater to new production instances
Andreas Müller
09:36 AM Revision a1205648 (cdmlib-apps): move country methods to term service in SynthesysCacheActivator
Andreas Müller

12/04/2020

05:59 PM Revision 2190c91b (taxeditor): fix wrong dependency to 5.18.0 snapshot version in printpublisher and local
Andreas Müller
04:47 PM bug #9347: LIE during ABCD file import
This should be fixed soon. Andreas Müller
03:32 PM bug #9347 (New): LIE during ABCD file import
File imported: attachment:Kurs-19_20_Herbar.xml
~~~~
++++++++Import Report+++++++++
Specimens created: 0
Skippe...
Andreas Kohlbecker
04:35 PM feature request #4866 (Closed): Implement clone method for complete classifications
This is implemented so far (tested for Centaurea/FoG on command line) with some open issues. Andreas Müller
04:33 PM bug #9349 (New): Open issues for classification cloning
* "Import Result" including count cloned taxa, synonyms, names, ... (do we need to merge UpdateResult and ImportResul... Andreas Müller
04:21 PM feature request #9320 (In Progress): Move additional publication information to nomenclatural source
Andreas Müller
04:11 PM task #9315 (In Progress): Remove old single source citation and microCitation columns
Andreas Müller
04:11 PM feature request #9327 (In Progress): Make taxon secundum reference an original source
Andreas Müller
04:10 PM bug #8141: explicitSource as additional attribute for TypeDesignationStatus
not so high priority as long as TypeDesignationStatus vocabularies can not be edited Andreas Müller
03:50 PM bug #9348 (New): Specimen online import dialog issues
1. The dialog has extrem width (at least in the KDE desktop environment) this seems to come from the widht of the com... Andreas Kohlbecker
03:00 PM bug #9264: Flag for toggle button for linking taxon with navigator looses/switch value without clicking the button
I hope this is fast to fix, therefore I move it to 5.19 Andreas Müller
02:55 PM feature request #9192: Layout issues for source in taxonnode details
If close, please move it back to 5.18 Andreas Müller
02:55 PM feature request #9192: Layout issues for source in taxonnode details
This to me looks fine now. Maybe we could have a bit more space above "Related persons or teams if the "more" section... Andreas Müller
02:48 PM bug #9073: Configuring the matrix view throws HTTP invoker exception
When testing this I got another exception (NPE) during save:
~~~
last remote method : http://test.e-taxonomy.eu:8...
Andreas Müller
02:45 PM bug #9245 (Feedback): Creating derived units from existing derived unit is not possible in specimen tree editor
This to me seems to be fixed. Katja can you check, and if true add commit and correct target version? Andreas Müller
02:23 PM bug #9346: Adding specimen to character matrix fails sometimes
The Problem occurred with unit ID 433 in rem_conf_am (Dianthella test Node; Germany, Berlin (MC 67)). Andreas Müller
01:32 PM bug #9346 (Closed): Adding specimen to character matrix fails sometimes
There are two issues:
1. the SourceDTO is not serializable
2. LIE
~~~ text
ENTRY org.eclipse.e4.ui.workbench...
Katja Luther
02:10 PM bug #8660 (Duplicate): Generic menu creation for Term trees
I think this is a duplicate for #9338 though the focus how to implement it has changed. Andreas Müller
02:09 PM Revision b4323390 (taxeditor): Revert "Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0"
This reverts commit bc421a42016f0e20f65ad9f2cc818899b53508e0. Katja Luther
02:09 PM feature request #9338: Restructure term menus
This ticket seems to be somehow contradictory to #8660. However, currently I think a menu not automatically created i... Andreas Müller
01:54 PM Revision b1eecb5d (taxeditor): add import
Katja Luther
01:50 PM Revision 279a5b72 (taxeditor): missed to commit adapted manifest
Katja Luther
01:34 PM Revision 5a1563c0 (taxeditor): avoid NPE when using new node as parent for d&d
Katja Luther
12:58 PM bug #9345 (New): Prevent or warn about unparsable values when entering quantitative data
Currently when entering e.g. "2,3" and pressing OK, the data is not stored but also no warning is given that it is p... Andreas Müller
11:51 AM Revision aaea7d8a (taxeditor): Revert "avoid NPE when using new node as parent for d&d"
This reverts commit 64dd32e955f33805399bc2b70b2f6bc14c12d4a0. Katja Luther
11:51 AM Revision 2c2faa69 (taxeditor): avoid NPE when using new node as parent for d&d
Katja Luther
11:49 AM Revision 09e63d7a (taxeditor): fix problem with last selected references
Katja Luther
11:48 AM bug #9344 (Closed): Datasets in Descriptive Dataset Navigator should be ordered
... alphabetically
Currently they seem to be unordered.
Andreas Müller
11:47 AM Revision bc421a42 (taxeditor): Updated version in pom / project files to taxeditor version : 5.13.1 and cdmlib version : 5.13.0
jenkins
11:09 AM feature request #8554 (Feedback): Allow drag&drop from character into FeatureTrees
this is probably a duplicate for #8774/#9337 (issues 4 and 5)? Andreas Müller
10:58 AM Revision 64dd32e9 (taxeditor): avoid NPE when using new node as parent for d&d
Katja Luther
10:03 AM bug #7990 (Closed): Moving a feature via d&d does not make the Feature Tree Editor dirty
ups no, this issue is solved with the new implementation. Katja Luther
10:01 AM bug #7990 (Feedback): Moving a feature via d&d does not make the Feature Tree Editor dirty
Is this still an open issue with the new term tree implementation? If not we should close it as works for me or as du... Andreas Müller
09:34 AM Revision 028014b6 (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.1 and cdmlib version : 5.18.0
jenkins

12/03/2020

09:34 PM Revision 113e67ef (taxeditor): Merge branch 'release/5.18.0' into develop
jenkins
09:34 PM Revision 5155769b (taxeditor): Merge branch 'release/5.18.0'
jenkins
08:54 PM Revision c654b140 (cdm-server): Merge branch 'release/5.18.0' into develop
jenkins
08:54 PM Revision 51596a1b (cdm-server): jenkins merging release branch into master (strategy: theirs)
jenkins
08:53 PM Revision f0a436fd (cdm-server): updating poms for branch'release/5.18.0' with non-snapshot versions
jenkins
08:52 PM Revision 345bcff8 (cdm-webapp): Merge branch 'release/5.18.0' into develop
jenkins
08:52 PM Revision d9a3e77e (cdm-webapp): jenkins merging release branch into master (strategy: theirs)
jenkins
08:51 PM Revision a08a9f9c (cdm-webapp): updating poms for branch'release/5.18.0' with non-snapshot versions
jenkins
08:51 PM Revision 8eb6f658 (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.18.0
jenkins
08:47 PM Revision c7e0b908 (cdm-dataportal): Merge branch 'release/5.18.0' into develop
jenkins
08:47 PM Revision 6b7f29c7 (cdm-dataportal): updating poms for branch'release/5.18.0' with non-snapshot versions
jenkins
08:47 PM Revision d2962586 (cdm-dataportal): release-preparation: production level css
jenkins
08:47 PM Revision 9ed2ff7f (cdm-vaadin): Merge branch 'release/5.18.0' into develop
jenkins
08:47 PM Revision 9251885f (cdm-vaadin): jenkins merging release branch into master (strategy: theirs)
jenkins
08:43 PM Revision 90094ee9 (cdm-vaadin): updating poms for branch'release/5.18.0' with non-snapshot versions
jenkins
08:43 PM Revision 99fbbfaf (cdm-vaadin): jenkins bumping cdmlib.version to 5.18.0
jenkins
08:28 PM bug #8774 (Closed): Reimplement term tree editors to implement the general save strategy
I think we can close this ticket. All remaining issues will go into the follow up ticket #9337 Andreas Müller
02:00 PM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
I move the expand of the tree after saving to the follow up ticket. Katja Luther
12:35 PM bug #8774: Reimplement term tree editors to implement the general save strategy
The saving of the termtree editor before adding a new term is not necessary anymore, only moving a new term is not po... Katja Luther
11:26 AM bug #8774: Reimplement term tree editors to implement the general save strategy
D&D on itself makes a node disappear and saving it creates a stackOverflow Andreas Müller
11:23 AM bug #8774: Reimplement term tree editors to implement the general save strategy
The tree should stay expanded when saving Andreas Müller
08:26 PM feature request #8756 (Feedback): Refresh button for structure tree and property tree in Character Editor
I tested again. It seems to work if the editing of the structure tree is done in the same TaxEditor instance or if th... Andreas Müller
08:00 PM bug #9343 (Duplicate): Open issues for DTO based term tree & character editor
upps, this is a duplicate of course for #9337. I moved all issues there Andreas Müller
07:28 PM bug #9343 (Duplicate): Open issues for DTO based term tree & character editor
copied from #8774
* tree collapses sometimes after save
* d&d from vocabulary editor to character editor not yet ...
Andreas Müller
07:33 PM Revision af199beb (cdmlib): Updating develop poms back to pre merge state
jenkins
07:33 PM Revision 638beb74 (cdmlib): Merge branch 'master' into develop
jenkins
07:33 PM Revision 8c4580af (cdmlib): updating develop poms to master versions to avoid merge conflicts
jenkins
07:33 PM Revision 27b8c645 (cdmlib): Merge branch 'release/5.18.0'
jenkins
07:11 PM Revision 5bdde967 (cdmlib): updating poms for branch'release/5.18.0' with non-snapshot versions
jenkins
06:48 PM Revision f3722b4a (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.18.0-SNAPSHOT
jenkins
06:47 PM Revision 6d43461a (cdm-webapp): updating poms for 5.19.0-SNAPSHOT development
jenkins
06:47 PM Revision 66dbc081 (cdm-webapp): updating poms for 5.18.0 branch with snapshot versions
jenkins
06:47 PM Revision 0e2580eb (cdm-webapp): jenkins bumping cdmlib.version and cdm.vaadin.version to 5.19.0-SNAPSHOT
jenkins
06:30 PM bug #9267 (Closed): No sec reference for move change Synonym to accepted Taxon
First version was implemented now.
I think we can close this ticket. All the rest will be done in the follow up ti...
Andreas Müller
03:32 PM bug #9267: No sec reference for move change Synonym to accepted Taxon
Now there is only a statement saying "The new taxon and the parent does not have the same secundum reference". But yo... Andreas Müller
01:55 PM bug #9267: No sec reference for move change Synonym to accepted Taxon
A "hot fix" version is implemented now. The new accepted taxon keeps the secundum reference of the former synonym and... Katja Luther
06:24 PM Revision 0b1617f5 (taxeditor): Updated version in pom / project files to taxeditor version : 5.19.0-SNAPSHOT and cdmlib version : 5.19.0-SNAPSHOT
jenkins
06:24 PM Revision f28ad9fa (taxeditor): Updated version in pom / project files to taxeditor version : 5.18.0 and cdmlib version : 5.18.0
jenkins
06:23 PM Revision 6b274bd6 (cdm-server): updating poms for 5.19.0-SNAPSHOT development
jenkins
06:23 PM Revision 599dde48 (cdm-vaadin): jenkins bumping cdmlib.version to 5.18.0-SNAPSHOT
jenkins
06:23 PM Revision 7e0d9ffd (cdm-dataportal): updating poms for 5.19.0-SNAPSHOT development
jenkins
06:23 PM Revision 1ae1237f (cdm-vaadin): updating poms for 5.19.0-SNAPSHOT development
jenkins
06:23 PM Revision 2e76afe1 (cdm-vaadin): updating poms for 5.18.0 branch with snapshot versions
jenkins
06:23 PM Revision c0d8b571 (cdm-vaadin): jenkins bumping cdmlib.version to 5.19.0-SNAPSHOT
jenkins
06:20 PM Revision 3a956fb6 (cdmlib): updating poms for 5.19.0-SNAPSHOT development
jenkins
06:20 PM Revision 2f1c9deb (cdmlib): updating poms for 5.18.0 branch with snapshot versions
jenkins
06:14 PM feature request #8529: [DISCUSS]Display of aggregated descriptions
Norbert, can you have a look on this ticket if you remember what was meant? Andreas Müller
06:09 PM bug #8874: move taxon is reverted when taxon is edited afterwards
Katja, do you remember why this ticket was assigned to me? Simply a mistake?
Can we reproduce this behavior?
Andreas Müller
05:52 PM bug #8547 (Closed): Default type of a newly created inReference should depend on the type of the reference
This is fixed as far as now by default the most likely reference type is now prefilled for inreferences.
There is ...
Andreas Müller
02:28 PM bug #8547: Default type of a newly created inReference should depend on the type of the reference
ReferenceType.inReferenceContraints() is a list now, so the first element in the list is the default preferred type. ... Andreas Müller
05:48 PM feature request #9342 (New): Only show specific reference types for inreferences
copied from #8547
RefereceType.inReferenceContraints() returns the possible values available for an inreference. T...
Andreas Müller
05:45 PM Revision 76ee473f (cdmlib): ref #8547 add inreference type for Proceedings
Andreas Müller
05:45 PM Revision 9f5a2d3a (cdmlib): throw exception when datasource could not be saved (instead of logging only)
Andreas Müller
05:44 PM Revision c58fbd18 (cdmlib): cleanup
Andreas Müller
05:39 PM bug #9199 (Closed): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Works as expected. We can close this ticket. Andreas Müller
03:31 PM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Andreas Müller wrote:
> Andreas Müller wrote:
> > Andreas Müller wrote:
> > > ~~Another minor issue: could we move...
Katja Luther
03:13 PM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Andreas Müller
03:09 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Andreas Müller wrote:
> Andreas Müller wrote:
> > ~~Another minor issue: could we move "Original Information" above...
Andreas Müller
01:56 PM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
this should be solved with last commit. Katja Luther
05:25 PM Revision 8bdc7bb8 (taxeditor): ref #9267: warning message instead of confirm message box
Katja Luther
05:21 PM task #9189 (Closed): Move datasource view to taxeditor.local
This works now but there are still open issues to solve before all cdmlib-db stuff can fully migrate to taxeditor.loc... Andreas Müller
05:20 PM feature request #9341 (New): Move local datasource access fully to taxeditor.local
The datasource view has been migrated to taxeditor.local in #9189.
However, there is still a dependency to cdmlib-...
Andreas Müller
05:19 PM Revision 49f27511 (taxeditor): ref #8774: only one message when trying to move new node
Katja Luther
04:59 PM Revision 9f3ac470 (taxeditor): some doc
Andreas Müller
04:55 PM Revision 25082155 (taxeditor): ref 9189 add mchange-commons-java to MANIFEST
Andreas Müller
04:42 PM Revision d9f875da (taxeditor): minor
Katja Luther
04:36 PM Revision 2fdfb0a3 (taxeditor): cleanup
Andreas Müller
04:36 PM Revision 88090686 (taxeditor): some gitignores
Andreas Müller
04:34 PM Revision 4228a4ef (taxeditor): ref 9189 add mchange-commons-java to dependency copy
Andreas Müller
03:36 PM feature request #9340 (Closed): Workflow support for secundum handling when making synonym a new accepted taxon
copied from #9267
(1) check above ticket for remaining issues. Most important is to have a preference to handle th...
Andreas Müller
03:26 PM Revision 5eabd2c1 (taxeditor): ref #9199: move original information behind name used in source
Katja Luther
02:25 PM Revision 46418777 (cdm-vaadin): ref #8547 make ReferenceType.inReferenceContraints() a list (adapt vaadin)
Andreas Müller
02:23 PM Revision 2c0bb8e3 (cdmlib): ref #8547 make ReferenceType.inReferenceContraints() a list
Andreas Müller
01:55 PM task #6714: Create 001-cdm.h2.sql automatically
This is more or less done in 5.18 except for the copying issue Andreas Müller
01:35 PM Revision 91febabd (taxeditor): ref #8774: code cleaning
Katja Luther
01:35 PM Revision e33f888a (taxeditor): ref #8774: label issues in character editor
Katja Luther
01:09 PM Revision 427ed9f2 (taxeditor): ref #8774: label issues in character editor
Katja Luther
12:26 PM Revision 81222649 (taxeditor): ref #8774: save is not necessary for creating new terms
Katja Luther
12:01 PM Revision 4a70bee8 (cdm-dataportal): ref #8851 adapting test assertions to modified test data
Andreas Kohlbecker
10:53 AM Revision b15678f9 (taxeditor): ref #8774: change text for duplicates
Katja Luther
10:40 AM Revision 4756075a (taxeditor): ref #8774: avoid d&d to child of the dropped node
Katja Luther

12/02/2020

10:37 PM Revision 68aa76e0 (cdm-dataportal): ref #9322 changing test case for invalid designation to misapplied name
Andreas Kohlbecker
07:53 PM bug #8774: Reimplement term tree editors to implement the general save strategy
The above also happens when D&D a NamedAreae from NamedArea Term Editor to NamedArea Term Tree Editor, so it is proba... Andreas Müller
07:51 PM bug #8774: Reimplement term tree editors to implement the general save strategy
D&D a NamedArea term from a NamedArea Tree Term Editor to an Rank Tree Term Editor leeds to the below NPE:
D&D wit...
Andreas Müller
07:47 PM bug #8774: Reimplement term tree editors to implement the general save strategy
D&d a term onto its own child makes both disappear in the UI. Saving this is one way to create the above StackOverflo... Andreas Müller
07:38 PM bug #8774: Reimplement term tree editors to implement the general save strategy
after moving some ranks around in the term editor I got the following when trying to save:
~~~
last remote method...
Andreas Müller
01:11 PM bug #8774: Reimplement term tree editors to implement the general save strategy
The text for duplicate recognition should be improved from
This term tree does not allow duplicates and there exi...
Andreas Müller
01:00 PM bug #8774: Reimplement term tree editors to implement the general save strategy
When changing a tree by e.g. changing a flag (order relevant) and then adding a term a message comes that the tree ne... Andreas Müller
12:20 PM bug #8774: Reimplement term tree editors to implement the general save strategy
... this happens whereever I try to move the 3rd rank from position of being child of 2nd rank (but in the same sessi... Andreas Müller
12:17 PM bug #8774 (Feedback): Reimplement term tree editors to implement the general save strategy
AOOB with a rank tree with 3 top level children, first I moved 3rd rank to be child of 2nd rank, than I tried to move... Andreas Müller
11:47 AM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
I think all remaining issues are solved or moved to new tickets. Katja Luther
07:00 PM bug #9322 (Closed): Remove invalid designation taxon relationship
Andreas Müller
06:50 PM feature request #9282 (Closed): Add nomenclatural standing
Andreas Müller
06:28 PM Revision 387aef2a (taxeditor): ref #9199: layout issues and code cleaning
Katja Luther
06:22 PM Revision 0eb2578c (cdmlib): ref #6591 handle also AUD table in SingleTermRemover for removing original spelling
Andreas Müller
06:21 PM Revision dcf6678d (cdmlib): cleanup
Andreas Müller
06:20 PM Revision e2d8dde3 (cdmlib): ref #9322 handle also AUD table in SingleTermRemover and connect the schema updater
Andreas Müller
05:19 PM Revision 1fa1f3de (cdmlib): cleanup
Andreas Müller
05:13 PM bug #9257: revise filtering in OccurrenceServiceImpl.assembleFieldUnitDTO(FieldUnit fieldUnit) by SpecimenOrObservationType.PreservedSpecimen
Katja Luther wrote:
> Andreas Kohlbecker wrote:
> > Hi Katja & AM, the current implementation partially filters for...
Andreas Müller
04:45 PM Revision 1c2b2e59 (cdmlib): move country methods to term service and some cleanup
Andreas Müller
04:31 PM feature request #9190 (In Progress): Make taxeditor.local a loadable plugin not installed by default
Andreas Müller
04:30 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
... looks like the error appears at different places depending on the type field that you enter data in Andreas Müller
04:28 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Also the NPE still exists, but with a different row number:
~~~
last remote method : http://test.e-taxonomy.eu:80...
Andreas Müller
04:25 PM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Andreas Müller wrote:
> ~~Another minor issue: could we move "Original Information" above ID Namespace and ID in Sou...
Andreas Müller
04:23 PM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Andreas Müller wrote:
> Sometimes the nomenclatural source still shows "No external link" yet instead of no protolog...
Andreas Müller
11:45 AM bug #9199 (Resolved): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
please review. Katja Luther
11:42 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Andreas Müller wrote:
> NPE when editing a lectotype source
>
> ~~~
> last remote method : http://test.e-taxonom...
Katja Luther
04:15 PM Revision 7b2afc79 (cdmlib-apps): uncomment schema location in app-import pom (not sure why it was commented)
Andreas Müller
04:14 PM Revision a1c98b63 (cdmlib-apps): ref #9228 add CentaureaCloneActivator
Andreas Müller
04:12 PM Revision 11e38aae (cdmlib): ref #9228 , ref #4866 some fixes for subtree cloning
Andreas Müller
04:12 PM Revision 5d03f828 (cdmlib): cleanup
Andreas Müller
03:03 PM Revision 3385926d (cdmlib): ref #9267: set sec of new taxon to sec of synonym
Katja Luther
03:01 PM Revision bb2b5493 (taxeditor): ref #9267: add message if sec of new taxon differs from sec of new parent
Katja Luther
02:46 PM Revision e796e4aa (taxeditor): ref #9189: move new menu item to the top
Katja Luther
02:42 PM task #9189: Move datasource view to taxeditor.local
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> > > Andreas Müller wrote:
> > > > The "New"...
Andreas Müller
02:27 PM Revision 3b11ede7 (taxeditor): avoid widget is disposed exception
Katja Luther
02:06 PM Revision 21015b47 (taxeditor): ref #8774: fix AOOB Exception in termtree editor
Katja Luther
02:05 PM bug #6356 (Closed): taxontree sort order as in editor
Norbert wrote: "alles klar, gelöst!" Andreas Kohlbecker
01:54 PM feature request #8308 (Worksforme): Extend specimen type designation editor
Andreas Kohlbecker
01:45 PM feature request #8308: Extend specimen type designation editor
This ticket can be set to "worksforme".
The image issue raised is not what the screenshot here shows. I will comment...
Wolf-Henning Kusber
01:27 PM bug #9313 (Closed): LazyInitializationException (LIE) in TaxonNamePopupEditor
Andreas Kohlbecker
01:04 PM bug #9313: LazyInitializationException (LIE) in TaxonNamePopupEditor
no problems with existing names (orthogr. variant, corrected name, species name, genus name) anymore. Ticket can be c... Wolf-Henning Kusber
12:54 PM Revision 0b429510 (cdm-dataportal): ref #9322 removing taxon relationship invalid designation from portal code
Andreas Kohlbecker
12:30 PM bug #8776 (In Progress): Open issues for TermCollection.allowDuplicates handling in TaxEditor
Andreas Müller
12:28 PM Revision ca0e1f12 (taxeditor): ref #4866, ref #9228 fix postgresql version number and add to gitignore
Andreas Müller
12:07 PM Revision 9306fdac (taxeditor): ref #4866, ref #9228 preliminary revert moving h2, postgresql and mysql from cdmlib to local and include mchange-commons-java in cdmlib
Andreas Müller
11:42 AM Revision d34bc6be (taxeditor): fix NPE in nameEditor
Katja Luther
11:35 AM Revision bd5b538f (taxeditor): ref #9199: fix NPE for newly created designation source
Katja Luther
11:35 AM Revision 0a20a617 (taxeditor): ref #9332: further clean up in editor
Katja Luther
09:07 AM feature request #9339: Improve warning message if save is necessary
We should do this soon Andreas Müller
08:22 AM feature request #9339 (New): Improve warning message if save is necessary
The actual warning message "The editor needs to be saved..." is misleading because normally only the active window is... Katja Luther

12/01/2020

08:45 PM Revision 77f6a14a (taxeditor): ref #4866, ref #9228 fix CloneClassificationOperation preliminary in TaxEditor
Andreas Müller
08:41 PM Revision 0b79f873 (taxeditor): ref #4866, ref #9228 fix CloneClassificationOperation preliminary in TaxEditor
Andreas Müller
08:36 PM Revision 77ad5e8c (taxeditor): ref #4866, ref #9228 fix CloneClassificationOperation preliminary in TaxEditor
Andreas Müller
08:06 PM Revision 9d1786e4 (cdmlib): ref #4866, ref #9228 try to fix further test in suite
Andreas Müller
08:01 PM Revision 8d24eb30 (cdmlib): cleanup
Andreas Müller
08:01 PM Revision 2b75e024 (cdmlib): ref #4866, ref #9228 try to fix NameServiceImplTest in suite
Andreas Müller
07:45 PM Revision 32aa5af0 (cdmlib): ref #4866, ref #9228 add references for test
Andreas Müller
07:28 PM Revision 8f658368 (cdmlib): ref #4866, ref #9228 fix test and use referenceDao instead of refService internally
Andreas Müller
07:19 PM Revision 67518a48 (cdmlib): ref #4866, ref #9228 implement subtree clone (cont., fix taxon cloning)
Andreas Müller
07:02 PM feature request #4866: Implement clone method for complete classifications
this is a blocker for #9228 Andreas Müller
06:57 PM Revision 00f63413 (cdmlib): cleanup
Andreas Müller
06:33 PM Revision e04ce4b2 (cdmlib): ref #4866, ref #9228 implement subtree clone
Andreas Müller
04:43 PM task #9189: Move datasource view to taxeditor.local
Katja Luther wrote:
> Andreas Müller wrote:
> > Katja Luther wrote:
> and the classLoader is EquinoxClassLoader
...
Andreas Müller
02:42 PM task #9189: Move datasource view to taxeditor.local
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > The finish button does not seem to wor...
Katja Luther
02:31 PM task #9189: Move datasource view to taxeditor.local
Katja Luther wrote:
> Andreas Müller wrote:
> > The finish button does not seem to work anymore (when using clone)....
Andreas Müller
12:55 PM task #9189: Move datasource view to taxeditor.local
Katja Luther wrote:
> Andreas Müller wrote:
> > The finish button does not seem to work anymore (when using clone)....
Andreas Müller
12:00 PM task #9189: Move datasource view to taxeditor.local
Andreas Müller wrote:
> The finish button does not seem to work anymore (when using clone).
This is caused by jav...
Katja Luther
11:50 AM task #9189: Move datasource view to taxeditor.local
Andreas Müller wrote:
> Katja Luther wrote:
> > Andreas Müller wrote:
> > > The "New" button is missing.
> >
> ...
Katja Luther
11:49 AM task #9189: Move datasource view to taxeditor.local
Andreas Müller wrote:
> Entering a name (or other information) now is very fast. It was slow before because I think ...
Katja Luther
11:37 AM task #9189: Move datasource view to taxeditor.local
Katja Luther wrote:
> Andreas Müller wrote:
> > The "New" button is missing.
>
> Shouldn't the new button should...
Andreas Müller
11:26 AM task #9189: Move datasource view to taxeditor.local
Entering a name (or other information) now is very fast. It was slow before because I think there was always done som... Andreas Müller
11:20 AM task #9189: Move datasource view to taxeditor.local
Andreas Müller wrote:
> The "New" button is missing.
Shouldn't the new button should be removed in #9119?
Katja Luther
11:17 AM task #9189: Move datasource view to taxeditor.local
The finish button does not seem to work anymore (when using clone). Andreas Müller
11:14 AM task #9189 (Feedback): Move datasource view to taxeditor.local
The "New" button is missing. Andreas Müller
11:12 AM task #9189: Move datasource view to taxeditor.local
Title translations are missing:
![](picture929-1.png)
Andreas Müller
04:39 PM bug #8851: display of name facts not appropriate in all cases
Walter, can you have a look after the next release, if this is now all correct? Andreas Müller
02:16 PM bug #8851 (Closed): display of name facts not appropriate in all cases
Andreas Kohlbecker
04:12 PM task #9206 (Closed): Solve cglib vs. cglib-nodep
the dependency to `hibernate-cglib-repack` was introduced by ben on Wed Feb 25 2009.
I don't see any further need f...
Andreas Kohlbecker
04:11 PM Revision 60942e5d (taxeditor): ref #9204, ref #9154 remove jtds and mssql from git in taxeditor.local
Andreas Müller
04:10 PM Revision 70ed1e1f (taxeditor): ref #9204, ref #9154 add cdmlib-remote-webapp.war to gitignore (not yet there because of renaming webapp->local
Andreas Müller
03:55 PM task #9219: Revert: requests with %2F in URL are rejected by apache
to be done right after the release 5.18 is deployed to our servers Andreas Kohlbecker
03:50 PM task #9253: revise OccurrenceServiceImpl.findFieldUnitDTO(..)
updating description with latest TODOs Andreas Kohlbecker
03:47 PM task #9253: revise OccurrenceServiceImpl.findFieldUnitDTO(..)
.. and another one:
TODO: The methods `OccurrenceServiceImpl._findFieldUnitDTO` and `OccurrenceServiceImpl.findFie...
Andreas Kohlbecker
03:07 PM task #9253: revise OccurrenceServiceImpl.findFieldUnitDTO(..)
more TODO:
revise commented code and clean up
Andreas Kohlbecker
03:46 PM Revision 99996219 (taxeditor): ref #9204 remove H2, postgresql and mysql fully from taxeditor.cdmlib
Andreas Müller
03:41 PM task #8458 (Closed): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
Andreas Kohlbecker
03:41 PM task #8458 (Resolved): document FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
Applied in changeset commit:cdmlib|a20e6aec783ee2e911e75f315e0c9e0137c2e7e7. Andreas Kohlbecker
03:41 PM Revision a20e6aec (cdmlib): fix #8458 documenting FieldUnitDTOOccurrenceServiceImpl.findFieldUnitDTO()
Andreas Kohlbecker
03:21 PM Revision 4e6b7379 (taxeditor): ref #9204 remove postgresql and mysql connector from taxeditor.cdmlib pom (cont.)
Andreas Müller
03:18 PM bug #8774: Reimplement term tree editors to implement the general save strategy
Katja Luther wrote:
> Andreas Müller wrote:
> > Can we remove "Inapplicable IF" and "Only applicable if" for all te...
Andreas Müller
01:49 PM bug #8774: Reimplement term tree editors to implement the general save strategy
Andreas Müller wrote:
> Can we remove "Inapplicable IF" and "Only applicable if" for all term trees except for those...
Katja Luther
12:34 PM bug #8774 (Feedback): Reimplement term tree editors to implement the general save strategy
Can we remove "Inapplicable IF" and "Only applicable if" for all term trees except for those having term type "Featur... Andreas Müller
11:59 AM bug #8774: Reimplement term tree editors to implement the general save strategy

But this should be done immediately:
Rename menu entry "Term Tree Editor" to "Term Trees" as it is inconsistent ...
Andreas Müller
11:56 AM bug #8774: Reimplement term tree editors to implement the general save strategy
I moved the open menu items to #9338 Andreas Müller
08:44 AM bug #8774 (Resolved): Reimplement term tree editors to implement the general save strategy
I think all issues are fixed. Only the wrong position for a short time (#9337) and handling of flat trees still open ... Katja Luther
03:16 PM Revision 47d8963b (taxeditor): ref #9204 remove postgresql and mysql connector from taxeditor.cdmlib pom
Andreas Müller
03:14 PM task #8635 (Closed): install collectd + facette for server monitoring
this is now fairly complete. the ticket is linked from the [[ServerAdministration]] wiki page, so it can be closed Andreas Kohlbecker
02:54 PM task #8419 (In Progress): Harmonization of the different specimen representations
work still in progress, moving ticket to next milestone Andreas Kohlbecker
02:53 PM task #8379: Review strange specimen implementations
TODO: final check Andreas Kohlbecker
02:28 PM Revision 8a79d625 (taxeditor): ref #9204 add jtds and mssql-jdbc-8.4.1.jre8 to gitignore
Andreas Müller
02:26 PM Revision 73192ab3 (taxeditor): ref #9204 remove some cdmlib-dbs from git and upgrade postgresql version
Andreas Müller
02:18 PM task #9265 (Closed): Adapt dataportal to new protologue handling
now that #8851 is solved the functionality which has been removed while working on this ticket is restored, so we c... Andreas Kohlbecker
02:13 PM Revision d9fa5913 (cdmlib): ref #8851 extednding init strategy for name descriptions by sources and annotations
Andreas Kohlbecker
02:11 PM Revision c11fa375 (cdm-dataportal): ref #8851 sources and annotations to name descriptions with test
Andreas Kohlbecker
01:45 PM Revision 233ae205 (cdmlib): ref #9204 upgrade postgresql driver to latest version
Andreas Müller
01:39 PM Revision 860adb95 (taxeditor): rename termtree editors to term trees in menu
Katja Luther
01:38 PM Revision a3a44561 (cdmlib): move mchange-commons-java version to parent pom
Andreas Müller
01:30 PM Revision 5c44e322 (taxeditor): ref #9189: harmonize l10n files
Katja Luther
01:28 PM Revision 59174ab0 (cdmlib): ref #4866, ref #9228 implement subtree clone in branch
Andreas Müller
12:18 PM bug #8522: Make type status mandatory in Name type designation editor
Note: A name type might be a status only that is not in the dropdown list, such as:
conserved type
rejected type
t...
Wolf-Henning Kusber
11:55 AM feature request #9338: Restructure term menus
I put milestone to 5.19 as it belongs to #8774 content wise. Andreas Müller
11:55 AM feature request #9338 (Closed): Restructure term menus
We now have the vocabulary menu and the term tree menu. Both look very different but should look similar.
To me it...
Andreas Müller
11:30 AM feature request #9326: Show all authors in bibliographic references
this is rather a question of how the cache strategy. Therefore I am changing category and assignee accordingly Andreas Kohlbecker
10:57 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
~~Another minor issue: could we move "Original Information" above ID Namespace and ID in Source. It is probably more ... Andreas Müller
10:56 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
NPE when editing a lectotype source
~~~
last remote method : http://test.e-taxonomy.eu:80/cdmserver/rem_conf_am/r...
Andreas Müller
10:52 AM bug #9199 (Feedback): Adapt TaxEditor to switch to originalSource for remaining single sourced objects
The space between URI and type (in external links could be a bit smaller and therefore a bit more space between type ... Andreas Müller
10:51 AM bug #9199: Adapt TaxEditor to switch to originalSource for remaining single sourced objects
Sometimes the nomenclatural source still shows "No external link" yet instead of no protologue yet.
![](picture920...
Andreas Müller
10:09 AM task #9228: Adaptations to allow editing Centaurea in Flora of Greece
AM: ...
Ich würde den Subtree jetzt clonen, d.h. für jedes Taxon eine Kopie anlegen, in der alle Daten (Synonyme, ...
Andreas Müller
 

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